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1.
Plant Signal Behav ; 18(1): 2245995, 2023 12 31.
Article in English | MEDLINE | ID: mdl-37573516

ABSTRACT

In addition to rhizobia, many types of co-existent bacteria are found in leguminous root nodules, but their habitats are unclear. To investigate this phenomenon, we labeled Bradyrhizobium diazoefficiens USDA122 and Bradyrhizobium sp. SSBR45 with Discosoma sp. red fluorescent protein (DsRed) or enhanced green fluorescent protein (eGFP). USDA122 enhances soybean growth by forming effective root nodules, but SSBR45 does not form any nodules. Using low-magnification laser scanning confocal microscopy, we found that infected cells in the central zone of soybean nodules appeared to be occupied by USDA122. Notably, high-magnification microscopy after co-inoculation of non-fluorescent USDA122 and fluorescence-labeled SSBR45 also revealed that SSBR45 inhabits the intercellular spaces of healthy nodules. More unexpectedly, co-inoculation of eGFP-labeled USDA122 and DsRed-labeled SSBR45 (and vice versa) revealed the presence of USDA122 bacteria in both the symbiosomes of infected cells and in the apoplasts of healthy nodules. We then next inspected nodules formed after a mixed inoculation of differently-labeled USDA122, without SSBR45, and confirmed the inhabitation of the both populations of USDA122 in the intercellular spaces. In contrast, infected cells were occupied by single-labeled USDA122. We also observed Mesorhizobium loti in the intercellular spaces of active wild-type nodules of Lotus japonicus using transmission electron microscopy. Compatible intercellular rhizobia have been described during nodule formation of several legume species and in some mutants, but our evidence suggests that this type of colonization may occur much more commonly in leguminous root nodules.


Subject(s)
Extracellular Space , Fabaceae , Rhizobium , Root Nodules, Plant , Rhizobium/physiology , Extracellular Space/microbiology , Root Nodules, Plant/microbiology , Root Nodules, Plant/ultrastructure , Green Fluorescent Proteins/metabolism , Glycine max/microbiology , Lotus/microbiology , Fabaceae/microbiology , Microscopy, Electron, Transmission , Symbiosis , Red Fluorescent Protein
2.
PLoS One ; 15(9): e0238178, 2020.
Article in English | MEDLINE | ID: mdl-32946441

ABSTRACT

Mycobacterium abscessus (M. abscessus), a rapidly growing mycobacterium, is an emergent opportunistic pathogen responsible for chronic bronchopulmonary infections in individuals with respiratory diseases such as cystic fibrosis. Most treatments of M. abscessus pulmonary infections are poorly effective due to the intrinsic resistance of this bacteria against a broad range of antibiotics including anti-tuberculosis agents. Consequently, the number of drugs that are efficient against M. abscessus remains limited. In this context, 19 oxadiazolone (OX) derivatives have been investigated for their antibacterial activity against both the rough (R) and smooth (S) variants of M. abscessus. Several OXs impair extracellular M. abscessus growth with moderated minimal inhibitory concentrations (MIC), or act intracellularly by inhibiting M. abscessus growth inside infected macrophages with MIC values similar to those of imipenem. Such promising results prompted us to identify the potential target enzymes of the sole extra and intracellular inhibitor of M. abscessus growth, i.e., compound iBpPPOX, via activity-based protein profiling combined with mass spectrometry. This approach led to the identification of 21 potential protein candidates being mostly involved in M. abscessus lipid metabolism and/or in cell wall biosynthesis. Among them, the Ag85C protein has been confirmed as a vulnerable target of iBpPPOX. This study clearly emphasizes the potential of the OX derivatives to inhibit the extracellular and/or intracellular growth of M. abscessus by targeting various enzymes potentially involved in many physiological processes of this most drug-resistant mycobacterial species.


Subject(s)
Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Mycobacterium abscessus/drug effects , Oxadiazoles/chemistry , Oxadiazoles/pharmacology , Animals , Extracellular Space/drug effects , Extracellular Space/microbiology , Intracellular Space/drug effects , Intracellular Space/microbiology , Mice , Microbial Sensitivity Tests , Mycobacterium abscessus/growth & development , RAW 264.7 Cells
3.
PLoS One ; 14(10): e0224440, 2019.
Article in English | MEDLINE | ID: mdl-31648237

ABSTRACT

Even when successfully surviving an infection, a host often fails to eliminate a pathogen completely and may sustain substantial pathogen burden for the remainder of its life. Using systemic bacterial infection in Drosophila melanogaster, we characterize chronic infection by three bacterial species from different genera - Providencia rettgeri, Serratia marcescens, and Enterococcus faecalis-following inoculation with a range of doses. To assess the consequences of these chronic infections, we determined the expression of antimicrobial peptide genes, survival of secondary infection, and starvation resistance after one week of infection. While higher infectious doses unsurprisingly lead to higher risk of death, they also result in higher chronic bacterial loads among the survivors for all three infections. All three chronic infections caused significantly elevated expression of antimicrobial peptide genes at one week post-infection and provided generalized protection again secondary bacterial infection. Only P. rettgeri infection significantly influenced resistance to starvation, with persistently infected flies dying more quickly under starvation conditions relative to controls. These results suggest that there is potentially a generalized mechanism of protection against secondary infection, but that other impacts on host physiology may depend on the specific pathogen. We propose that chronic infections in D. melanogaster could be a valuable tool for studying tolerance of infection, including impacts on host physiology and behavior.


Subject(s)
Drosophila melanogaster/microbiology , Host-Pathogen Interactions , Animals , Antimicrobial Cationic Peptides/genetics , Bacterial Load , Chronic Disease , Drosophila melanogaster/cytology , Drosophila melanogaster/genetics , Drosophila melanogaster/physiology , Extracellular Space/microbiology , Gene Expression Regulation , Starvation/microbiology
4.
Proc Natl Acad Sci U S A ; 116(38): 18900-18910, 2019 09 17.
Article in English | MEDLINE | ID: mdl-31484768

ABSTRACT

The foliar plant pathogen Pseudomonas syringae can establish large epiphytic populations on leaf surfaces before apoplastic colonization. However, the bacterial genes that contribute to these lifestyles have not been completely defined. The fitness contributions of 4,296 genes in P. syringae pv. syringae B728a were determined by genome-wide fitness profiling with a randomly barcoded transposon mutant library that was grown on the leaf surface and in the apoplast of the susceptible plant Phaseolus vulgaris Genes within the functional categories of amino acid and polysaccharide (including alginate) biosynthesis contributed most to fitness both on the leaf surface (epiphytic) and in the leaf interior (apoplast), while genes involved in type III secretion system and syringomycin synthesis were primarily important in the apoplast. Numerous other genes that had not been previously associated with in planta growth were also required for maximum epiphytic or apoplastic fitness. Fourteen hypothetical proteins and uncategorized glycosyltransferases were also required for maximum competitive fitness in and on leaves. For most genes, no relationship was seen between fitness in planta and either the magnitude of their expression in planta or degree of induction in planta compared to in vitro conditions measured in other studies. A lack of association of gene expression and fitness has important implications for the interpretation of transcriptional information and our broad understanding of plant-microbe interactions.


Subject(s)
Genes, Bacterial , Host-Pathogen Interactions/genetics , Plant Leaves/microbiology , Pseudomonas syringae/physiology , Extracellular Space/microbiology , Gene Expression Profiling , Genetic Fitness , Genome, Bacterial/genetics , Mutation , Plant Diseases/microbiology , Plant Leaves/cytology , Pseudomonas syringae/genetics
5.
Folia Microbiol (Praha) ; 64(4): 567-577, 2019 Jul.
Article in English | MEDLINE | ID: mdl-30661218

ABSTRACT

The formation of a hardly removable biofilm in food processing and clinical settings calls for a deeper understanding of composition of the matrix that protects the biofilm cells, as the crucial matrix component is extracellular DNA (eDNA), participating in adhesion, aggregation and penetration reduction, yet serving as a horizontal gene transfer reservoir. Therefore, we evaluated eDNA release from the biofilm of two pathogens, Listeria monocytogenes and Staphylococcus aureus, with respect to their origin under different culturing condition. Primarily, the biofilms were observed by confocal laser scanning microscopy (CLSM) under conditions mimicking the food processing environment and human body. The eDNA was quantitatively characterised based on its area by IMARIS. Next, the eDNA content and biofilm formation were quantified by spectrophotometry. Data from both sets of experiments were statistically evaluated. The eDNA release varied between the microorganism, culturing conditions and the origin of strains. Independent of the method used, the clinical strains of S. aureus released more eDNA than the food related strains at 37 °C. eDNA content can be crucial discriminating matrix component between food related and clinical strains. Deeper understanding of the eDNA role in such a phenomenon could facilitate the design of effective strategy for biofilm disruption.


Subject(s)
Biofilms , Extracellular Space/microbiology , Listeria monocytogenes/genetics , Listeriosis/microbiology , Staphylococcus aureus/genetics , Biological Transport , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Bacterial/metabolism , Humans , Listeria monocytogenes/chemistry , Listeria monocytogenes/physiology , Microscopy, Confocal , Staphylococcal Infections/microbiology , Staphylococcus aureus/chemistry , Staphylococcus aureus/physiology
6.
PLoS One ; 13(7): e0200011, 2018.
Article in English | MEDLINE | ID: mdl-29990340

ABSTRACT

Salmonella is a major food-borne pathogen able to persist in food processing environments because of its ability to form biofilms. A Salmonella enterica serotype Agona isolate from poultry (S24) was grown at 37°C in biofilms for up to 144 hours (H144) in attachment to polystyrene surfaces. Biofilm structures were examined at different stages in their development (H3, H24, H48, H72, H96 and H144) using confocal laser scanning microscopy (CLSM) in conjunction with fluorescent dyes for live cells (SYTO 9), dead cells (propidium iodide), proteins (fluorescein isothiocyanate isomer I), lipids (DiD'oil), α-polysaccharides (concanavalin A, tetramethylrhodamine conjugate), and ß-polysaccharides (calcofluor white M2R). Strain S24 developed a robust biofilm at H72 (biovolume of 166,852.5 ± 13,681.8 µm3 in the observation field of 16,078.2 µm2). The largest biovolume of live cells was also detected at H72 (128,110.3 ± 4,969.1 µm3), decreasing thereafter, which was probably owing to the detachment of cells prior to a new phase of colonization. The percentage of dead cells with regard to total cells in the biofilms increased throughout the incubation, ranging from 2.3 ± 1.1% (H24) to 44.2 ± 11.0% (H144). Proteins showed the greatest biovolume among the extracellular components within the biofilms, with values ranging from 1,295.1 ± 1,294.9 µm3 (H3) to 19,186.2 ± 8,536.0 µm3 (H96). Maximum biovolume values of 15,171.9 ± 660.7 µm3 (H48), 7,055.3 ± 4,415.2 µm3 (H144), and 2,548.6 ± 1,597.5 µm3 (H72) were observed for ß-polysaccharides, α-polysaccharides and lipids, respectively. A strong (P < 0.01) positive correlation was found between the total biovolume of biofilm and the biovolume of live cells, proteins and ß-polysaccharides, which may serve as useful markers of biofilm formation. The present work provides new insights into the formation of S. Agona biofilms. Our findings may contribute to the designing of reliable strategies for preventing and removing these bacterial communities.


Subject(s)
Biofilms/growth & development , Extracellular Space/microbiology , Salmonella/physiology , Cell Line , Cell Survival , Polysaccharides/metabolism , Salmonella/metabolism
7.
PLoS One ; 13(4): e0196120, 2018.
Article in English | MEDLINE | ID: mdl-29672589

ABSTRACT

Mycobacterium abscessus, a rapidly growing nontuberculous mycobacterium, are increasingly present in soft tissue infections and chronic lung diseases, including cystic fibrosis, and infections are characterized by growth in neutrophil-rich environments. M. abscessus is observed as two distinct smooth and rough morphotypes. The environmental smooth morphotype initiates infection and has a relatively limited ability to activate neutrophils. The rough morphotype has increased virulence and immunogenicity. However, the neutrophil response to the rough morphotype has not been explored. Killing of the smooth and rough strains, including cystic fibrosis clinical isolates, was equivalent. Neutrophil uptake of M. abscessus was similar between morphotypes. Mechanistically, both rough and smooth morphotypes enhanced neutrophil reactive oxygen species generation but inhibition of NADPH oxidase activity did not affect M. abscessus viability. However, inhibition of phagocytosis and extracellular traps reduced killing of the smooth morphotype with lesser effects against the rough morphotype. Neutrophils treated with M. abscessus released a heat-labile mycobactericidal activity against the rough morphotype, but the activity was heat-tolerant against the smooth morphotype. Overall, M. abscessus stimulates ineffective neutrophil reactive oxygen species generation, and key mechanisms differ in killing of the smooth (phagocytosis-dependent, extracellular traps, and heat-tolerant secreted factor) and rough (extracellular traps and a heat-labile secreted factor) morphotypes. These studies represent an essential advancement in understanding the host response to M. abscessus, and help explain the recalcitrance of infection.


Subject(s)
Cytotoxicity, Immunologic , Mycobacterium abscessus/immunology , Neutrophils/immunology , Neutrophils/microbiology , Cytokines/metabolism , Extracellular Space/immunology , Extracellular Space/metabolism , Extracellular Space/microbiology , Extracellular Traps , Humans , Intracellular Space/immunology , Intracellular Space/metabolism , Intracellular Space/microbiology , Microbial Viability/immunology , Mycobacterium Infections, Nontuberculous/immunology , Mycobacterium Infections, Nontuberculous/microbiology , Neutrophils/metabolism , Phagocytosis , Reactive Oxygen Species/metabolism , Superoxides/metabolism
8.
PLoS One ; 12(7): e0181168, 2017.
Article in English | MEDLINE | ID: mdl-28715508

ABSTRACT

This study was conducted to evaluate if extracellular polysaccharides (EPS) are used by Streptococcus mutans (Sm) biofilm during night starvation, contributing to enamel demineralization increasing occurred during daily sugar exposure. Sm biofilms were formed during 5 days on bovine enamel slabs of known surface hardness (SH). The biofilms were exposed to sucrose 10% or glucose + fructose 10.5% (carbohydrates that differ on EPS formation), 8x/day but were maintained in starvation during the night. Biofilm samples were harvested during two moments, on the end of the 4th day and in the morning of the 5th day, conditions of sugar abundance and starvation, respectively. The slabs were also collected to evaluate the percentage of surface hardness loss (%SHL). The biofilms were analyzed for EPS soluble and insoluble and intracellular polysaccharides (IPS), viable bacteria (CFU), biofilm architecture and biomass. pH, calcium and acid concentration were determined in the culture medium. The data were analyzed by two-way ANOVA followed by Tukey's test or Student's t-test. The effect of the factor carbohydrate treatment for polysaccharide analysis was significant (p < 0.05) but not the harvest moment (p > 0.05). Larger amounts of soluble and insoluble EPS and IPS were formed in the sucrose group when compared to glucose + fructose group (p < 0.05), but they were not metabolized during starvation time (S-EPS, p = 0.93; I-EPS, p = 0.11; and IPS = 0.96). Greater enamel %SHL was also found for the sucrose group (p < 0.05) but the demineralization did not increase during starvation (p = 0.09). In conclusion, the findings suggest that EPS metabolization by S. mutans during night starvation do not contribute to increase enamel demineralization occurred during the daily abundance of sugar.


Subject(s)
Biofilms , Dental Enamel/microbiology , Polysaccharides/metabolism , Streptococcus mutans/metabolism , Tooth Demineralization/microbiology , Analysis of Variance , Animals , Biofilms/growth & development , Calcium/metabolism , Cattle , Dental Enamel/metabolism , Extracellular Space/metabolism , Extracellular Space/microbiology , Fructose/pharmacology , Glucose/pharmacology , Hardness , Hydrogen-Ion Concentration , In Vitro Techniques , Incisor/metabolism , Incisor/microbiology , Microscopy, Confocal , Streptococcus mutans/growth & development , Sucrose/pharmacology , Tooth Demineralization/metabolism
9.
Methods Mol Biol ; 1535: 275-284, 2017.
Article in English | MEDLINE | ID: mdl-27914086

ABSTRACT

Bacterial pathogens represent a constant threat to human health that was exacerbated in recent years by a dramatic increase of strains resistant to last resort antibiotics. The immune system of higher vertebrates generally evolved several efficient innate and adaptive mechanisms to fight ubiquitous bacterial pathogens. Among those mechanisms, immune proteases were recognized to contribute essentially to antibacterial immune defense. The effector serine proteases of the adaptive immune system, the granzymes, exert potent antimicrobial activity when they are delivered into the bacterial cytosol by prokaryotic membrane disrupting proteins, such as granulysin.In this chapter, we are detailing experimental protocols to study the synergistic cytotoxic effects of human granzymes and granulysin on extracellular as well as on intracellular bacterial pathogens in vitro. In addition, we provide a simple and fast-forward method to biochemically purify native cytotoxic effector molecules necessary to perform this kind of investigations.


Subject(s)
Anti-Bacterial Agents/pharmacology , Antigens, Differentiation, T-Lymphocyte/pharmacology , Bacteria/drug effects , Bacteria/immunology , Cytotoxicity, Immunologic , Granzymes/pharmacology , Perforin/pharmacology , Cell Line , Dose-Response Relationship, Drug , Extracellular Space/immunology , Extracellular Space/microbiology , Humans , Intracellular Space/immunology , Intracellular Space/microbiology , Killer Cells, Natural/immunology , Killer Cells, Natural/metabolism , T-Lymphocytes, Cytotoxic/immunology , T-Lymphocytes, Cytotoxic/metabolism
10.
Nat Commun ; 7: 13292, 2016 11 03.
Article in English | MEDLINE | ID: mdl-27808091

ABSTRACT

Sensing bacterial products in the cytosol of mammalian cells by NOD-like receptors leads to the activation of caspase-1 inflammasomes, and the production of the pro-inflammatory cytokines interleukin (IL)-18 and IL-1ß. In addition, mouse caspase-11 (represented in humans by its orthologs, caspase-4 and caspase-5) detects cytosolic bacterial LPS directly. Activation of caspase-1 and caspase-11 initiates pyroptotic host cell death that releases potentially harmful bacteria from the nutrient-rich host cell cytosol into the extracellular environment. Here we use single cell analysis and time-lapse microscopy to identify a subpopulation of host cells, in which growth of cytosolic Salmonella Typhimurium is inhibited independently or prior to the onset of cell death. The enzymatic activities of caspase-1 and caspase-11 are required for growth inhibition in different cell types. Our results reveal that these proteases have important functions beyond the direct induction of pyroptosis and proinflammatory cytokine secretion in the control of growth and elimination of cytosolic bacteria.


Subject(s)
Caspase 1/immunology , Caspases/immunology , Cytosol/immunology , Pyroptosis/immunology , Salmonella Infections/immunology , Salmonella typhimurium/immunology , 3T3 Cells , Animals , Caspase 1/genetics , Caspase 1/metabolism , Caspases/genetics , Caspases/metabolism , Caspases, Initiator , Cytosol/enzymology , Cytosol/microbiology , Disease Models, Animal , Extracellular Space/microbiology , Host-Pathogen Interactions/immunology , Humans , Immunity, Innate , Inflammasomes/immunology , Inflammasomes/metabolism , Macrophages/enzymology , Macrophages/immunology , Macrophages/microbiology , Mice , Mice, Inbred C57BL , Mice, Knockout , Salmonella Infections/microbiology , Salmonella typhimurium/drug effects , Salmonella typhimurium/growth & development , Salmonella typhimurium/pathogenicity , Single-Cell Analysis , Time-Lapse Imaging
12.
Mol Plant Pathol ; 17(6): 890-902, 2016 08.
Article in English | MEDLINE | ID: mdl-26609568

ABSTRACT

The mechanism of colonization of intercellular spaces by the soil-borne and vascular plant-pathogenic bacterium Ralstonia solanacearum strain OE1-1 after invasion into host plants remains unclear. To analyse the behaviour of OE1-1 cells in intercellular spaces, tomato leaves with the lower epidermis layers excised after infiltration with OE1-1 were observed under a scanning electron microscope. OE1-1 cells formed microcolonies on the surfaces of tomato cells adjacent to intercellular spaces, and then aggregated surrounded by an extracellular matrix, forming mature biofilm structures. Furthermore, OE1-1 cells produced mushroom-type biofilms when incubated in fluids of apoplasts including intercellular spaces, but not xylem fluids from tomato plants. This is the first report of biofilm formation by R. solanacearum on host plant cells after invasion into intercellular spaces and mushroom-type biofilms produced by R. solanacearum in vitro. Sugar application led to enhanced biofilm formation by OE1-1. Mutation of lecM encoding a lectin, RS-IIL, which reportedly exhibits affinity for these sugars, led to a significant decrease in biofilm formation. Colonization in intercellular spaces was significantly decreased in the lecM mutant, leading to a loss of virulence on tomato plants. Complementation of the lecM mutant with native lecM resulted in the recovery of mushroom-type biofilms and virulence on tomato plants. Together, our findings indicate that OE1-1 produces mature biofilms on the surfaces of tomato cells after invasion into intercellular spaces. RS-IIL may contribute to biofilm formation by OE1-1, which is required for OE1-1 virulence.


Subject(s)
Biofilms , Extracellular Space/microbiology , Plant Vascular Bundle/microbiology , Ralstonia solanacearum/pathogenicity , Solanum lycopersicum/microbiology , Bacterial Adhesion/drug effects , Biopolymers/metabolism , Carbohydrates/pharmacology , Colony Count, Microbial , Extracellular Space/drug effects , Solanum lycopersicum/drug effects , Solanum lycopersicum/ultrastructure , Mutation/genetics , Plant Vascular Bundle/drug effects , Ralstonia solanacearum/drug effects , Ralstonia solanacearum/ultrastructure , Virulence/drug effects
14.
BMC Res Notes ; 8: 245, 2015 Jun 17.
Article in English | MEDLINE | ID: mdl-26081497

ABSTRACT

BACKGROUND: The spatial structure of a habitat can have a strong impact on community dynamics. Different experimental approaches exist to explore the effect of spatial structure on bacterial communities. To investigate the effect of 'space', a single implementation of spatial structure is often contrasted to bacterial community dynamics in well-mixed cultures. While such comparisons are useful, it is likely that the observed dynamics will be particular to the specific experimental implementation of spatial structure. In order to address this question, we track the community dynamics of a two-strain Escherichia coli community in various spatial habitats and relate the observed dynamics to the structure of a habitat. RESULTS: By tracking the community dynamics of rpoS wild-type and mutant E. coli in radially expanding colonies on solid and semi-solid agar plates, we find that the mutant strain outcompetes the wild-type on semi-solid agar plates, whereas the two strains coexist on solid agar. We compare these results to previous studies in which the same two strains were shown to coexist in habitats spatially structured by microfabrication, while the mutant outcompeted the wild-type in well-mixed batch cultures. Together, these observations show that different implementations of space may result in qualitatively different community dynamics. Furthermore, we argue that the same competitive outcome (e.g. coexistence) may arise from distinct underlying dynamics in different experimental implementations of spatial structure. CONCLUSIONS: Our observations demonstrate that different experimental implementations of spatial structure may not only lead to quantitatively different communities (changes in the relative abundance of types) but can also lead to qualitatively different outcomes of long-term community dynamics (coexistence versus extinction and loss of biodiversity).


Subject(s)
Antibiosis/physiology , Escherichia coli/growth & development , Symbiosis/physiology , Agar , Batch Cell Culture Techniques , Colony Count, Microbial , Culture Media , Extracellular Space/microbiology
15.
Bioresour Technol ; 180: 345-51, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25636169

ABSTRACT

This study aimed to investigate biofilm properties evolution coupled with different ages during the start-up period in a moving bed biofilm reactor system. Physicochemical characteristics including adhesion force, extracellular polymeric substances (EPS), morphology as well as volatile solid and microbial community were studied. Results showed that the formation and development of biofilms exhibited four stages, including (I) initial attachment and young biofilm formation, (II) biofilms accumulation, (III) biofilm sloughing and updating, and (IV) biofilm maturation. During the whole start-up period, adhesion force was positively and significantly correlated with the contents of EPS, especially the content of polysaccharide. In addition, increased adhesion force and EPS were beneficial for biofilm retention. Gram-negative bacteria mainly including Sphaerotilus, Zoogloea and Haliscomenobacter were predominant in the initial stage. Actinobacteria was beneficial to resist sloughing. Furthermore, filamentous bacteria were dominant in maturation biofilm.


Subject(s)
Bioreactors/microbiology , Microbial Consortia/physiology , Waste Disposal, Fluid/instrumentation , Biofilms/growth & development , Biological Oxygen Demand Analysis , DNA, Ribosomal , Extracellular Space/chemistry , Extracellular Space/microbiology , Gram-Negative Bacteria/chemistry , Gram-Negative Bacteria/growth & development , Microbial Consortia/genetics , Polymers/chemistry , Polymers/metabolism , Waste Disposal, Fluid/methods
16.
Proc Natl Acad Sci U S A ; 111(37): 13469-74, 2014 Sep 16.
Article in English | MEDLINE | ID: mdl-25187559

ABSTRACT

Animals exploit different germ-line-encoded proteins with various domain structures to detect the signature molecules of pathogenic microbes. These molecules are known as pathogen-associated molecular patterns (PAMPs), and the host proteins that react with PAMPs are called pattern recognition proteins (PRPs). Here, we present a novel type of protein domain structure capable of binding to bacterial peptidoglycan (PGN) and the minimal PGN motif muramyl dipeptide (MDP). This domain is designated as apextrin C-terminal domain (ApeC), and its presence was confirmed in several invertebrate phyla and subphyla. Two apextrin-like proteins (ALP1 and ALP2) were identified in a basal chordate, the Japanese amphioxus Branchiostoma japonicum (bj). bjALP1 is a mucosal effector secreted into the gut lumen to agglutinate the Gram-positive bacterium Staphylococcus aureus via PGN binding. Neutralization of secreted bjALP1 by anti-bjALP1 monoclonal antibodies caused serious damage to the gut epithelium and rapid death of the animals after bacterial infection. bjALP2 is an intracellular PGN sensor that binds to TNF receptor-associated factor 6 (TRAF6) and prevents TRAF6 from self-ubiquitination and hence from NF-κB activation. MDP was found to compete with TRAF6 for bjALP2, which released TRAF6 to activate the NF-κB pathway. BjALP1 and bjALP2 therefore play distinct and complementary functions in amphioxus gut mucosal immunity. In conclusion, discovery of the ApeC domain and the functional analyses of amphioxus ALP1 and ALP2 allowed us to define a previously undocumented type of PRP that is represented across different animal phyla.


Subject(s)
Bacteria/immunology , Extracellular Space/microbiology , Intracellular Space/microbiology , Lancelets/immunology , Lancelets/microbiology , Proteins/immunology , Acetylmuramyl-Alanyl-Isoglutamine/pharmacology , Agglutination/drug effects , Amino Acid Motifs , Amino Acid Sequence , Animals , Bacterial Infections/immunology , Bacterial Infections/pathology , Gene Expression Regulation/drug effects , HEK293 Cells , Humans , Lancelets/drug effects , Models, Biological , Molecular Sequence Data , NF-kappa B/metabolism , Peptidoglycan/metabolism , Protein Binding/drug effects , Protein Structure, Tertiary , Proteins/chemistry , Proteins/genetics , Proteins/ultrastructure , Receptors, Pattern Recognition/metabolism , Signal Transduction/drug effects , TNF Receptor-Associated Factor 6/metabolism , Ubiquitination/drug effects
17.
PLoS One ; 9(2): e90042, 2014.
Article in English | MEDLINE | ID: mdl-24587206

ABSTRACT

The formation of extracellular traps (ETs) has recently been recognized as a novel defense mechanism in several types of innate immune cells. It has been suggested that these structures are toxic to microbes and contribute significantly to killing several pathogens. However, the role of ETs formed by macrophages (METs) in defense against microbes remains little known. In this study, we demonstrated that a subset of murine J774A.1 macrophage cell line (8% to 17%) and peritoneal macrophages (8.5% to 15%) form METs-like structures (METs-LS) in response to Escherichia coli and Candida albicans challenge. We found only a portion of murine METs-LS, which are released by dying macrophages, showed detectable killing effects on trapped E. coli but not C. albicans. Fluorescence and scanning electron microscopy analyses revealed that, in vitro, both microorganisms were entrapped in J774A.1 METs-LS composed of DNA and microbicidal proteins such as histone, myeloperoxidase and lysozyme. DNA components of both nucleus and mitochondrion origins were detectable in these structures. Additionally, METs-LS formation occurred independently of ROS produced by NADPH oxidase, and this process did not result in cell lysis. In summary, our results emphasized that microbes induced METs-LS in murine macrophage cells and that the microbicidal activity of these METs-LS differs greatly. We propose the function of METs-LS is to contain invading microbes at the infection site, thereby preventing the systemic diffusion of them, rather than significantly killing them.


Subject(s)
Candida albicans/physiology , Escherichia coli/physiology , Extracellular Space/microbiology , Macrophages/cytology , Macrophages/microbiology , Phagocytosis , Animals , Cell Line , Cell Nucleus/metabolism , DNA, Mitochondrial/metabolism , Mice , Species Specificity
18.
SEMERGEN, Soc. Esp. Med. Rural Gen. (Ed. impr.) ; 40(2): e33-e36, mar. 2014. tab
Article in English | IBECS | ID: ibc-121491

ABSTRACT

El síndrome de fuga capilar es un trastorno insólito, de etiología desconocida y presentación recurrente caracterizado por un aumento de la permeabilidad capilar, lo que permite la fuga de fluidos y proteínas desde el sistema circulatorio al espacio intersticial dando lugar a shock y edema masivo. Lo inespecífico de sus síntomas y signos de presentación, su rápida progresión clínica y la elevada tasa de mortalidad de los episodios agudos pueden haber derivado en la falta de reconocimiento del mismo. Son los médicos de familia los que habitualmente evalúan en primera instancia a los pacientes que sufren este trastorno clínico, bien sea desde los dispositivos de urgencias y emergencias, las unidades de urgencia hospitalaria o incluso (en los casos más leves) en consulta ambulatoria. Es su condición de fatalidad y la mejora del pronóstico, si se inicia un tratamiento adecuado, la que nos lleva a subrayar la importancia de reconocer dicho cuadro con el fin de aplicar una terapia intensiva y juiciosa de emergencias (AU)


Systemic capillary leak syndrome is a rare disorder of unknown etiology and often recurrent episodes characterized by increased capillary permeability that allows a leakage of fluid and proteins from the circulatory system to the interstitial space leading to shock and massive edema. The lack of recognition of this disease may be due to its unespecific signs and symptons of presentation, its rapid clinical progression and high mortality of the acute episodes. General physicians are usually the first to evaluate patients with this kind of disorder, either in the pre-hospital situation, hospital emergency units or even (in the milder cases) in the health centers. Its poor outcome and the improvement in the prognosis, if appropriate treatment is initiated, leads us to emphasize the importance of recognizing this pathology in order to start the appropriate intensive care and emergency treatment (AU)


Subject(s)
Humans , Female , Adult , Capillary Leak Syndrome/complications , Capillary Leak Syndrome/diagnosis , Capillary Leak Syndrome/therapy , Capillary Permeability , Capillary Permeability/physiology , Hypoalbuminemia/complications , Hypoalbuminemia/diagnosis , Shock/complications , Shock/diagnosis , Family Practice/methods , Family Practice/trends , Extracellular Space , Extracellular Space/microbiology , Emergencies/epidemiology , Emergency Medicine/methods , Emergency Medicine/trends
19.
Biotechnol Lett ; 36(2): 241-50, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24101247

ABSTRACT

Cells are generally stored at low temperature which slows their cellular metabolism. However, the stress induced by cold shock can lead to cell injury or death. Here, we found that exposing human leukemia HL-60 cells to cold shock followed by rewarming (CS/RW) increased the number of dead cells with remodeled genomic structures in which DNA fibers fully unfold and extrude into extracellular space, similar to neutrophil extracellular traps (NETs). The unfolded DNA was associated with NET marker proteins, such as neutrophil elastase and histone H3, and could trap significant numbers of Escherichia coli. We also found that reactive oxygen species-a requisite for NET generation-accumulated during CS/RW in HL-60 cells. This treatment of HL-60 cells to trigger global DNA structural alterations has not been reported before, and helps to elucidate the mechanisms of human cellular response to cold stress.


Subject(s)
Chromatin/radiation effects , DNA/metabolism , Neutrophils/radiation effects , Bacterial Adhesion , Cell Line, Tumor , Cold Temperature , Escherichia coli/physiology , Extracellular Space/metabolism , Extracellular Space/microbiology , Humans , Neutrophils/microbiology
20.
Immunol Res ; 57(1-3): 268-78, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24293008

ABSTRACT

The evolution of early multicellular eukaryotes 400-500 million years ago required a defensive strategy against microbial invasion. Pore-forming proteins containing the membrane-attack-complex-perforin (MACPF) domain were selected as the most efficient means to destroy bacteria or virally infected cells. The mechanism of pore formation by the MACPF domain is distinctive in that pore formation is purely physical and unspecific. The MACPF domain polymerizes, refolds, and inserts itself into bilayer membranes or bacterial outer cell walls. The displacement of surface lipid/carbohydrate molecules by the polymerizing MACPF domain creates clusters of large, water-filled holes that destabilize the barrier function and provide access for additional anti-bacterial or anti-viral effectors to sensitive sites that complete the destruction of the invader via enzymatic or chemical attack. The highly efficient mechanism of anti-microbial defense by a combined physical and chemical strategy using pore-forming MACPF-proteins has been retargeted during evolution of vertebrates and mammals for three purposes: (1) to kill extracellular bacteria C9/polyC9 evolved in conjunction with complement, (2) to kill virus infected and cancer cells perforin-1/polyperforin-1 CTL evolved targeted by NK and CTL, and (3) to kill intracellular bacteria transmembrane perforin-2/putative polyperforin-2 evolved targeted by phagocytic and nonphagocytic cells. Our laboratory has been involved in the discovery and description of each of the three pore-formers that will be reviewed here.


Subject(s)
Immunity/physiology , Pore Forming Cytotoxic Proteins/physiology , Animals , Bacteria/immunology , Complement Membrane Attack Complex , Extracellular Space/immunology , Extracellular Space/microbiology , Extracellular Space/virology , Humans , Intracellular Space/immunology , Intracellular Space/microbiology , Neoplasms/metabolism , Virus Diseases/immunology , Virus Diseases/metabolism
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