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1.
Planta ; 260(1): 26, 2024 Jun 11.
Article in English | MEDLINE | ID: mdl-38861179

ABSTRACT

MAIN CONCLUSION: CaTPS2 and CaTPS3 were significantly expressed in flowers of Curcuma alismatifolia 'Shadow' and demonstrated bifunctional enzyme activity, CaTPS2 generated linalool and nerolidol as products, and CaTPS3 catalyzed ß-myrcene and ß-farnesene formation. This study presents the discovery and functional characterization of floral terpene synthase (TPS) genes in Curcuma alismatifolia 'Shadow', a cultivar renowned for its unique fragrance. Addressing the gap in understanding the genetic basis of floral scent in this species, we identified eight TPS genes through comprehensive transcriptome sequencing. Among these, CaTPS2 and CaTPS3 were significantly expressed in floral tissues and demonstrated bifunctional enzyme activity corresponding to the major volatile compounds detected in 'Shadow'. Functional analyses, including in vitro assays complemented with rigorous controls and alternative identification methods, elucidated the roles of these TPS genes in terpenoid biosynthesis. In vitro studies were conducted via heterologous expression in E. coli, followed by purification of the recombinant protein using affinity chromatography, enzyme assays were performed with GPP/FPP as the substrate, and volatile products were inserted into the GC-MS for analysis. Partially purified recombinant protein of CaTPS2 catalyzed GPP and FPP to produce linalool and nerolidol, respectively, while partially purified recombinant protein of CaTPS3 generated ß-myrcene and ß-farnesene with GPP and FPP as substrates, respectively. Real-time quantitative PCR further validated the expression patterns of these genes, correlating with terpenoid accumulation in different plant tissues. Our findings illuminate the molecular mechanisms underpinning floral fragrance in C. alismatifolia and provide a foundation for future genetic enhancements of floral scent in ornamental plants. This study, therefore, contributes to the broader understanding of terpenoid biosynthesis in plant fragrances, paving the way for biotechnological applications in horticulture plant breeding.


Subject(s)
Acyclic Monoterpenes , Alkyl and Aryl Transferases , Curcuma , Flowers , Sesquiterpenes , Alkyl and Aryl Transferases/genetics , Alkyl and Aryl Transferases/metabolism , Flowers/genetics , Flowers/enzymology , Flowers/metabolism , Sesquiterpenes/metabolism , Acyclic Monoterpenes/metabolism , Curcuma/genetics , Curcuma/enzymology , Curcuma/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Gene Expression Regulation, Plant , Terpenes/metabolism , Volatile Organic Compounds/metabolism , Phylogeny , Odorants
2.
Plant Physiol Biochem ; 212: 108738, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38761544

ABSTRACT

In the realm of ornamental horticulture, crape myrtle (Lagerstroemia indica) stands out for its aesthetic appeal, attributed largely to its vibrant flowers and distinctive branching architecture. This study embarked on a comprehensive exploration of the gibberellin oxidase (GAox) gene family in crape myrtle, illuminating its pivotal role in regulating GA levels, a key determinant of plant developmental processes. We identified and characterized 36 LiGAox genes, subdivided into GA2ox, GA3ox, GA20ox, and GAox-like subgroups, through genomic analyses. These genes' evolutionary trajectories were delineated, revealing significant gene expansions attributed to segmental duplication events. Functional analyses highlighted the divergent expression patterns of LiGAox genes across different crape myrtle varieties, associating them with variations in flower color and branching architecture. Enzymatic activity assays on selected LiGA2ox enzymes exhibited pronounced GA2 oxidase activity, suggesting a potential regulatory role in GA biosynthesis. Our findings offered a novel insight into the molecular underpinnings of GA-mediated growth and development in L. indica, providing a foundational framework for future genetic enhancements aimed at optimizing ornamental traits.


Subject(s)
Gene Expression Regulation, Plant , Mixed Function Oxygenases , Plant Proteins , Mixed Function Oxygenases/metabolism , Mixed Function Oxygenases/genetics , Plant Proteins/metabolism , Plant Proteins/genetics , Gibberellins/metabolism , Flowers/genetics , Flowers/growth & development , Flowers/anatomy & histology , Flowers/enzymology , Phylogeny
3.
Plant J ; 119(1): 490-507, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38666591

ABSTRACT

The cuticle, consisting of cuticular wax and cutin, is a lipid membrane that seals the plant surface against environmental stress. ß-Ketoacyl-CoA synthases (KCSs) are condensing enzymes catalyzing crucial reactions elongating hydrocarbon chains into precursors for various cuticular wax components. Although many KCS genes were well characterized in various species, the functions of the closely related Arabidopsis KCS3, KCS12, KCS19 enzymes remained unclear. Here, we found KCS3 preferentially expressed in growing organs, especially in guard cells. kcs3 mutants and kcs3kcs12 double mutants displayed sepal fusion phenotypes, suggesting defects in cuticle formation. The mutants had decreased amounts of wax components with relatively short hydrocarbon chains in the developing organs but increased levels of wax compounds in mature organs. In contrast, kcs19 mutants showed seed fusion phenotypes and altered chain length distributions in seed suberin. Taken together, our results show that KCS12 and KCS3 share redundant functions in flower development, while KCS19 is involved in seed coat formation. All three condensing enzymes are involved in the elongation of C>18 hydrocarbon chains in young, actively expanding tissues.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Arabidopsis/genetics , Arabidopsis/enzymology , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Gene Expression Regulation, Plant , Flowers/genetics , Flowers/enzymology , Flowers/growth & development , Flowers/metabolism , Seeds/genetics , Seeds/growth & development , Seeds/metabolism , Seeds/enzymology , Waxes/metabolism , Mutation , Phenotype , Lipids , 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/genetics , 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/metabolism
4.
Plant J ; 118(5): 1439-1454, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38379355

ABSTRACT

Aporphine alkaloids are a large group of natural compounds with extensive pharmaceutical application prospects. The biosynthesis of aporphine alkaloids has been paid attentions in the past decades. Here, we determined the contents of four 1-benzylisoquinoline alkaloids and five aporphine alkaloids in root, stem, leaf, and flower of Aristolochia contorta Bunge, which belongs to magnoliids. Two CYP80 enzymes were identified and characterized from A. contorta. Both of them catalyze the unusual C-C phenol coupling reactions and directly form the aporphine alkaloid skeleton. AcCYP80G7 catalyzed the formation of hexacyclic aporphine corytuberine. AcCYP80Q8 catalyzed the formation of pentacyclic proaporphine glaziovine. Kingdom-wide phylogenetic analysis of the CYP80 family suggested that CYP80 first appeared in Nymphaeales. The functional divergence of hydroxylation and C-C (or C-O) phenol coupling preceded the divergence of magnoliids and eudicots. Probable crucial residues of AcCYP80Q8 were selected through sequence alignment and molecular docking. Site-directed mutagenesis revealed two crucial residues E284 and Y106 for the catalytic reaction. Identification and characterization of two aporphine skeleton-forming enzymes provide insights into the biosynthesis of aporphine alkaloids.


Subject(s)
Alkaloids , Aporphines , Aristolochia , Cytochrome P-450 Enzyme System , Phylogeny , Plant Proteins , Aporphines/metabolism , Aristolochia/enzymology , Aristolochia/metabolism , Aristolochia/genetics , Aristolochia/chemistry , Plant Proteins/metabolism , Plant Proteins/genetics , Cytochrome P-450 Enzyme System/metabolism , Cytochrome P-450 Enzyme System/genetics , Alkaloids/metabolism , Plant Leaves/metabolism , Plant Leaves/genetics , Plant Leaves/enzymology , Plant Roots/metabolism , Plant Roots/enzymology , Plant Roots/genetics , Flowers/enzymology , Flowers/genetics , Flowers/metabolism , Plant Stems/metabolism , Plant Stems/enzymology , Plant Stems/genetics
5.
Biomed Res Int ; 2022: 1382604, 2022.
Article in English | MEDLINE | ID: mdl-35047628

ABSTRACT

Anthocyanins are important pigments for flower color, determining the ornamental and economic values of horticultural plants. As a key enzyme in the biosynthesis of anthocyanidins, dihydroflavonol 4-reductase (DFR) catalyzes the reduction of dihydroflavonols to generate the precursors for anthocyanidins (i.e., leucoanthocyanidins) and anthocyanins. To investigate the functions of DFRs in plants, we cloned the GlaDFR1 and GlaDFR2 genes from the petals of Gentiana lutea var. aurantiaca and transformed both genes into Nicotiana tabacum by Agrobacterium-mediated leaf disc method. We further investigated the molecular and phenotypic characteristics of T1 generation transgenic tobacco plants selected based on the hygromycin resistance and verified by both PCR and semiquantitative real-time PCR analyses. The phenotypic segregation was observed in the flower color of the transgenic tobacco plants, showing petals darker than those in the wild-type (WT) plants. Results of high-performance liquid chromatography (HPLC) analysis showed that the contents of gentiocyanin derivatives were decreased in the petals of transgenic plants in comparison to those of WT plants. Ours results revealed the molecular functions of GlaDFR1 and GlaDFR2 in the formation of coloration, providing solid theoretical foundation and candidate genes for further genetic improvement in flower color of plants.


Subject(s)
Alcohol Oxidoreductases , Flowers , Gentiana , Pigmentation/physiology , Plant Proteins , Alcohol Oxidoreductases/genetics , Alcohol Oxidoreductases/metabolism , Cloning, Molecular , Flowers/enzymology , Flowers/genetics , Gentiana/enzymology , Gentiana/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Nicotiana/enzymology , Nicotiana/genetics
6.
Biochem Biophys Res Commun ; 589: 16-22, 2022 01 22.
Article in English | MEDLINE | ID: mdl-34883285

ABSTRACT

Gretchen Hagen 3 (GH3) amido synthetases conjugate amino acids to a carboxyl group of small molecules including hormones auxin, jasmonate, and salicylic acid. The Arabidopsis genome harbors 19 GH3 genes, whose exact roles in plant development have been difficult to define because of genetic redundancy among the GH3 genes. Here we use CRISPR/Cas9 gene editing technology to delete the Arabidopsis group II GH3 genes, which are able to conjugate indole-3-acetic acid (IAA) to amino acids. We show that plants lacking the eight group II GH3 genes (gh3 octuple mutants) accumulate free IAA and fail to produce IAA-Asp and IAA-Glu conjugates. Consequently, gh3 octuple mutants have extremely short roots, long and dense root hairs, and long hypocotyls. Our characterization of gh3 septuple mutants, which provide sensitized backgrounds, reveals that GH3.17 and GH3.9 play prominent roles in root elongation and seed production, respectively. We show that GH3 functions correlate with their expression patterns, suggesting that local deactivation of auxin also contributes to maintaining auxin homeostasis. Moreover, this work provides a method for elucidating functions of individual members of a gene family, whose members have overlapping functions.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Flowers , Indoleacetic Acids , Ligases , Plant Roots , Arabidopsis/enzymology , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Flowers/enzymology , Flowers/growth & development , Gene Expression Regulation, Plant , Genes, Plant , Homeostasis , Indoleacetic Acids/metabolism , Ligases/genetics , Ligases/metabolism , Multigene Family , Mutation/genetics , Phenotype , Plant Development/genetics , Plant Roots/enzymology , Plant Roots/growth & development
7.
BMC Plant Biol ; 21(1): 590, 2021 Dec 13.
Article in English | MEDLINE | ID: mdl-34903166

ABSTRACT

BACKGROUND: Arabinogalactan-proteins (AGPs) are structurally complex hydroxyproline-rich cell wall glycoproteins ubiquitous in the plant kingdom. AGPs biosynthesis involves a series of post-translational modifications including the addition of type II arabinogalactans to non-contiguous Hyp residues. To date, eight Hyp-galactosyltransferases (Hyp-GALTs; GALT2-GALT9) belonging to CAZy GT31, are known to catalyze the addition of the first galactose residues to AGP protein backbones and enable subsequent AGP glycosylation. The extent of genetic redundancy, however, remains to be elucidated for the Hyp-GALT gene family. RESULTS: To examine their gene redundancy and functions, we generated various multiple gene knock-outs, including a triple mutant (galt5 galt8 galt9), two quadruple mutants (galt2 galt5 galt7 galt8, galt2 galt5 galt7 galt9), and one quintuple mutant (galt2 galt5 galt7 galt8 galt9), and comprehensively examined their biochemical and physiological phenotypes. The key findings include: AGP precipitations with ß-Yariv reagent showed that GALT2, GALT5, GALT7, GALT8 and GALT9 act redundantly with respect to AGP glycosylation in cauline and rosette leaves, while the activity of GALT7, GALT8 and GALT9 dominate in the stem, silique and flowers. Monosaccharide composition analysis showed that galactose was decreased in the silique and root AGPs of the Hyp-GALT mutants. TEM analysis of 25789 quintuple mutant stems indicated cell wall defects coincident with the observed developmental and growth impairment in these Hyp-GALT mutants. Correlated with expression patterns, galt2, galt5, galt7, galt8, and galt9 display equal additive effects on insensitivity to ß-Yariv-induced growth inhibition, silique length, plant height, and pollen viability. Interestingly, galt7, galt8, and galt9 contributed more to primary root growth and root tip swelling under salt stress, whereas galt2 and galt5 played more important roles in seed morphology, germination defects and seed set. Pollen defects likely contributed to the reduced seed set in these mutants. CONCLUSION: Additive and pleiotropic effects of GALT2, GALT5, GALT7, GALT8 and GALT9 on vegetative and reproductive growth phenotypes were teased apart via generation of different combinations of Hyp-GALT knock-out mutants. Taken together, the generation of higher order Hyp-GALT mutants demonstrate the functional importance of AG polysaccharides decorating the AGPs with respect to various aspects of plant growth and development.


Subject(s)
Arabidopsis/genetics , Galactans/metabolism , Galactosyltransferases/metabolism , Mucoproteins/metabolism , Arabidopsis/enzymology , Arabidopsis/physiology , Arabidopsis/ultrastructure , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cell Wall/metabolism , Flowers/enzymology , Flowers/genetics , Flowers/physiology , Flowers/ultrastructure , Galactosyltransferases/genetics , Genetic Pleiotropy , Germination , Glucosides/chemistry , Glycosylation , Hydroxyproline/metabolism , Meristem/enzymology , Meristem/genetics , Meristem/physiology , Meristem/ultrastructure , Mucoproteins/genetics , Mutation , Organ Specificity , Phloroglucinol/analogs & derivatives , Phloroglucinol/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Stems/enzymology , Plant Stems/genetics , Plant Stems/physiology , Plant Stems/ultrastructure , Protein Biosynthesis , Salt Stress , Seeds/enzymology , Seeds/genetics , Seeds/physiology , Seeds/ultrastructure
8.
BMC Plant Biol ; 21(1): 598, 2021 Dec 16.
Article in English | MEDLINE | ID: mdl-34915841

ABSTRACT

BACKGROUND: Phosphatidylinositol 4 phosphate 5-kinase (PIP5K) plays a key enzyme role in the inositol signal transduction system and has essential functions in plants in terms of growth, development, and stress responses. However, systematic studies on the wheat PIP5K gene family and its relation to male sterility have not been reported yet. RESULTS: Sixty-four TaPIP5K genes were identified. The TaPIP5K genes contained similar gene structures and conserved motifs on the same branches of the evolutionary tree, and their cis-regulatory elements were related to MeJA-responsiveness. Furthermore, 49 pairs of collinearity genes were identified and mainly subjected to purification selection during evolution. Synteny analyses showed that some PIP5K genes in wheat and the other four species shared a relatively conserved evolutionary process. The expression levels of many conservative TaPIP5K genes in HT-ms anthers were significantly lower than that in Normal anthers. In addition, HT-ms anthers have no dehiscence, and levels of OPDA and JA-ILE are significantly lower at the trinucleus stage. CONCLUSION: These results indicate that the PIP5K gene family may be associated with male sterility induced by HT, and the reduction of JA-ILE levels and the abnormal levels of these genes expression may be one reason for the HT-ms anthers having no dehiscence, ultimately leading to the abortion of the anthers.


Subject(s)
Flowers/genetics , Phosphotransferases (Alcohol Group Acceptor)/genetics , Plant Infertility/genetics , Triticum/physiology , Chromosome Mapping , Chromosomes, Plant , Fertility , Flowers/enzymology , Flowers/physiology , Gene Duplication , Gene Expression Profiling , Genes, Plant , Hot Temperature , Multigene Family , Phosphotransferases (Alcohol Group Acceptor)/physiology , Phylogeny , Real-Time Polymerase Chain Reaction , Synteny , Triticum/enzymology , Triticum/genetics
9.
BMC Plant Biol ; 21(1): 578, 2021 Dec 06.
Article in English | MEDLINE | ID: mdl-34872520

ABSTRACT

BACKGROUND: Pectin methylesterase (PME) is one of pectin-modifying enzyme that affects the pectin homeostasis in cell wall and regulates plant growth and diverse biological processes. The PME genes have been well explored and characterized in different plants. Nevertheless, systematic research on the soybean (Glycine max L.) PME genes remain lacking. RESULTS: We identified 127 Glycine max PME genes (GmPME) from the soybean Wm82.a2.v1 genome, which unevenly distributed on 20 soybean chromosomes. Phylogenetic analysis classified the GmPME genes into four clades (Group I, Group II, Group III and Group IV). GmPME gene members in the same clades displayed similar gene structures and motif patterns. The gene family expansion analysis demonstrated that segmental duplication was the major driving force to acquire novel GmPME genes compared to the tandem duplication events. Further synteny and evolution analyses showed that the GmPME gene family experienced strong purifying selective pressures during evolution. The cis-element analyses together with the expression patterns of the GmPME genes in various tissues suggested that the GmPME genes broadly participate in distinct biological processes and regulate soybean developments. Importantly, based on the transcriptome data and quantitative RT-PCR validations, we examined the potential roles of the GmPME genes in regulating soybean flower bud development and seed germination. CONCLUSION: In conclusion, we provided a comprehensive characterization of the PME genes in soybean, and our work laid a foundation for the functional study of GmPME genes in the future.


Subject(s)
Carboxylic Ester Hydrolases/genetics , Evolution, Molecular , Genome, Plant , Glycine max/enzymology , Glycine max/genetics , Flowers/enzymology , Flowers/genetics , Genes, Plant , Germination , Nucleotide Motifs , Phylogeny , Promoter Regions, Genetic , Transcriptome
10.
Plant Physiol Biochem ; 167: 619-629, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34479030

ABSTRACT

Lily is one of the most economically important flowers worldwide due to its elegant appearance and appealing scent, which is mainly composed of monoterpene ocimene, linalool and benzenoids. Sugars are the primary products of plants, with fructose and hexose sugars being the substrate material for most organic compounds and metabolic pathways in plants. Herein, we isolated and functionally characterized hexokinase (LoHXK) and fructokinase (LoFRK) from Lilium 'Siberia' flower, which indicated their potential roles in floral aroma production. Real-time PCR analysis showed that LoHXK and LoFRK were highly expressed in the flower filament. Overexpression and virus-induced gene silencing (VIGS) assays revealed that LoHXK and LoFRK significantly modified the emission of ß-ocimene and linalool contents via regulation of expression of key structural volatile synthesis genes (LoTPS1 and LoTPS3). Under exogenous glucose and fructose application, the volatile contents of ß-ocimene and linalool were increased and the expression levels of key structural genes were upregulated. The emission of ß-ocimene and linalool followed a diurnal circadian rhythm. Determination of carbon fluxes via 13C-labeled glucose and 13C-labeled fructose experiments showed that the mass spectra of ocimene and linalool significantly increased, however, the m/z ratio of ethyl benzoate did not change. Furthermore, yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays showed that LoFRK interacted with LoMYB1 and LoMYB2 proteins. Together, these results suggest that hexokinase and fructokinase may play significant roles in the regulation of ocimene and linalool biosynthesis in Lilium 'Siberia'.


Subject(s)
Fructokinases , Hexokinase , Lilium , Odorants , Flowers/enzymology , Fructokinases/genetics , Gene Expression Regulation, Plant , Hexokinase/genetics , Lilium/enzymology , Lilium/genetics
11.
BMC Plant Biol ; 21(1): 373, 2021 Aug 13.
Article in English | MEDLINE | ID: mdl-34388969

ABSTRACT

BACKGROUND: Flowering is an important inflection point in the transformation from vegetative to reproductive growth, and premature bolting severely decreases crop yield and quality. RESULTS: In this study, a stable early-bolting mutant, ebm3, was identified in an ethyl methanesulfonate (EMS)-mutagenized population of a Chinese cabbage doubled haploid (DH) line 'FT'. Compared with 'FT', ebm3 showed early bolting under natural cultivation in autumn, and curled leaves. Genetic analysis showed that the early-bolting phenotype was controlled by a single recessive nuclear gene. Modified MutMap sequencing, genotyping analyses and allelism test provide strong evidence that BrEBM3 (BraA04g017190.3 C), encoding the histone methyltransferase CURLY LEAF (CLF), was the strongly candidate gene of the emb3. A C to T base substitution in the 14th exon of BrEBM3 resulted in an amino acid change (S to F) and the early-bolting phenotype of emb3. The mutation occurred in the SET domain (Suppressor of protein-effect variegation 3-9, Enhancer-of-zeste, Trithorax), which catalyzes site- and state-specific lysine methylation in histones. Tissue-specific expression analysis showed that BrEBM3 was highly expressed in the flower and bud. Promoter activity assay confirmed that BrEBM3 promoter was active in inflorescences. Subcellular localization analysis revealed that BrEBM3 localized in the nucleus. Transcriptomic studies supported that BrEBM3 mutation might repress H3K27me3 deposition and activate expression of the AGAMOUS (AG) and AGAMOUS-like (AGL) loci, resulting in early flowering. CONCLUSIONS: Our study revealed that an EMS-induced early-bolting mutant ebm3 in Chinese cabbage was caused by a nonsynonymous mutation in BraA04g017190.3 C, encoding the histone methyltransferase CLF. These results improve our knowledge of the genetic and genomic resources of bolting and flowering, and may be beneficial to the genetic improvement of Chinese cabbage.


Subject(s)
Amino Acid Substitution , Brassica rapa/enzymology , Histone Methyltransferases/metabolism , Plant Proteins/metabolism , Amino Acids/metabolism , Brassica rapa/genetics , Brassica rapa/growth & development , Flowers/enzymology , Flowers/genetics , Flowers/growth & development , Histone Methyltransferases/chemistry , Histone Methyltransferases/genetics , Mutation , Plant Proteins/genetics , Transcriptome
12.
BMC Plant Biol ; 21(1): 376, 2021 Aug 16.
Article in English | MEDLINE | ID: mdl-34399701

ABSTRACT

BACKGROUND: Glycolytic pathway is common in all plant organs, especially in oxygen-deficient tissues. Phosphofructokinase (PFK) is a rate-limiting enzyme in the glycolytic pathway and catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-bisphosphate. Cassava (M. esculenta) root is a huge storage organ with low amount of oxygen. However, less is known about the functions of PFK from M. esculenta (MePFK). We conducted a systematic analysis of MePFK genes to explore the function of the MePFK gene family under hypoxic stress. RESULTS: We identified 13 MePFK genes and characterised their sequence structure. The phylogenetic tree divided the 13 genes into two groups: nine were MePFKs and four were pyrophosphate-fructose-6-phosphate phosphotransferase (MePFPs). We confirmed by green fluorescent protein fusion protein expression that MePFK03 and MePFPA1 were localised in the chloroplast and cytoplasm, respectively. The expression profiles of the 13 MePFKs detected by quantitative reverse transcription polymerase chain reaction revealed that MePFK02, MePFK03, MePFPA1, MePFPB1 displayed higher expression in leaves, root and flower. The expression of MePFK03, MePFPA1 and MePFPB1 in tuber root increased gradually with plant growth. We confirmed that hypoxia occurred in the cassava root, and the concentration of oxygen was sharply decreasing from the outside to the inside root. The expression of MePFK03, MePFPA1 and MePFPB1 decreased with the decrease in the oxygen concentration in cassava root. Waterlogging stress treatment showed that the transcript level of PPi-dependent MePFP and MeSuSy were up-regulated remarkably and PPi-dependent glycolysis bypass was promoted. CONCLUSION: A systematic survey of phylogenetic relation, molecular characterisation, chromosomal and subcellular localisation and cis-element prediction of MePFKs were performed in cassava. The expression profiles of MePFKs in different development stages, organs and under waterlogging stress showed that MePFPA1 plays an important role during the growth and development of cassava. Combined with the transcriptional level of MeSuSy, we found that pyrophosphate (PPi)-dependent glycolysis bypass was promoted when cassava was under waterlogging stress. The results would provide insights for further studying the function of MePFKs under hypoxic stress.


Subject(s)
Genome, Plant , Manihot/enzymology , Manihot/genetics , Phosphofructokinases/genetics , Phosphofructokinases/metabolism , Chloroplasts/enzymology , Chromosome Mapping , Chromosomes, Plant , Conserved Sequence , Cytoplasm/enzymology , Exons , Flowers/enzymology , Introns , Multigene Family , Oxygen/metabolism , Phylogeny , Plant Leaves/enzymology , Plant Roots/enzymology , Promoter Regions, Genetic , Stress, Physiological/genetics , Transcriptome
13.
Mol Biol Rep ; 48(4): 3451-3461, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33934248

ABSTRACT

Saffron is a well-known Chinese traditional herb, and crocin biosynthesis is related to the yield and quality of saffron. This study aimed to screen differentially expressed genes (DEGs) in saffron at different flowering stages and identify cytochrome P450 (CYP) genes involved in crocin biosynthesis. Saffron samples at different flowering stages were used for RNA sequencing, and DEGs between the samples at three days before the flowering stage (- 3da) and two days after the flowering stage (+ 2da) were screened. Thereafter, significantly differentially expressed CYP genes were identified, and CYP gene expression at different flowering stages and in various tissues of saffron was determined using real-time quantitative polymerase chain reaction (RT-qPCR). After sequencing and analysis, 1508 DEGs between the samples at - 3da and + 2da were identified, including 487 upregulated and 1021 downregulated genes, which were enriched in 16 biological processes, 5 cellular components, 3 molecular functions, and 11 KEGG pathways, including protein processing in endoplasmic reticulum, pentose and glucuronate interconversions, starch and sucrose metabolism, estrogen signaling pathway, and mitogen-activated protein kinase signaling pathway. In addition, 12 significantly differentially expressed CYP genes were identified. The RT-qPCR results showed that CYP76C4, CYP72A15, CYP72A219, CYP97B2, CYP714C2, CYP71A1, CYP94C1, and CYP86A8 were all expressed in the pistils, and CYP72A219, CYP72A15, CYP97B2, CYP71A1, and CYP86A8 were highly expressed in the pistils. Our study established a transcriptome library of saffron and found that CYP72A219, CYP72A15, CYP97B2, CYP71A1, and CYP86A8 may be candidates involved crocin biosynthesis in saffron.


Subject(s)
Carotenoids/metabolism , Crocus/enzymology , Cytochrome P-450 Enzyme System/metabolism , Flowers/enzymology , Gene Expression Regulation, Plant , Crocus/genetics , Cytochrome P-450 Enzyme System/genetics , Flowers/genetics , Gene Expression Profiling , Metabolic Networks and Pathways , Sequence Analysis, RNA , Signal Transduction
14.
Plant Cell ; 33(2): 306-321, 2021 04 17.
Article in English | MEDLINE | ID: mdl-33793793

ABSTRACT

Unisexual flowers provide a useful system for studying plant sex determination. In cucumber (Cucumis sativus L.), three major Mendelian loci control unisexual flower development, Female (F), androecious [a; 1-aminocyclopropane-1-carboxylate {ACC} synthase 11, acs11], and Monoecious (M; ACS2), referred to here as the Female, Androecious, Monoecious (FAM) model, in combination with two genes, gynoecious (g, the WIP family C2H2 zinc finger transcription factor gene WIP1) and the ethylene biosynthetic gene ACC oxidase 2 (ACO2). The F locus, conferring gynoecy and the potential for increasing fruit yield, is defined by a 30.2-kb tandem duplication containing three genes. However, the gene that determines the Female phenotype, and its mechanism, remains unknown. Here, we created a set of mutants and revealed that ACS1G is responsible for gynoecy conferred by the F locus. The duplication resulted in ACS1G acquiring a new promoter and expression pattern; in plants carrying the F locus duplication, ACS1G is expressed early in floral bud development, where it functions with ACO2 to generate an ethylene burst. The resulting ethylene represses WIP1 and activates ACS2 to initiate gynoecy. This early ACS1G expression bypasses the need for ACS11 to produce ethylene, thereby establishing a dominant pathway for female floral development. Based on these findings, we propose a model for how these ethylene biosynthesis genes cooperate to control unisexual flower development in cucumber.


Subject(s)
Cucumis sativus/enzymology , Cucumis sativus/genetics , Flowers/enzymology , Flowers/genetics , Lyases/genetics , Amino Acid Sequence , Gene Expression Regulation, Plant , Genetic Loci , Genome, Plant , Genotype , Glucuronidase/metabolism , Lyases/chemistry , Phenotype , Plants, Genetically Modified , RNA, Messenger/genetics , RNA, Messenger/metabolism
15.
Plant Cell Environ ; 44(7): 2185-2199, 2021 07.
Article in English | MEDLINE | ID: mdl-33783858

ABSTRACT

Common beans (Phaseolus vulgaris) are highly sensitive to elevated temperatures, and rising global temperatures threaten bean production. Plants at the reproductive stage are especially susceptible to heat stress due to damage to male (anthers) and female (ovary) reproductive tissues, with anthers being more sensitive to heat. Heat damage promotes early tapetal cell degradation, and in beans this was shown to cause male infertility. In this study, we focus on understanding how changes in leaf carbon export in response to elevated temperature stress contribute to heat-induced infertility. We hypothesize that anther glucose-6-phosphate dehydrogenase (G6PDH) activity plays an important role at elevated temperature and promotes thermotolerance. To test this hypothesis, we compared heat-tolerant and susceptible common bean genotypes using a combination of phenotypic, biochemical, and physiological approaches. Our results identified changes in leaf sucrose export, anther sugar accumulation and G6PDH activity and anther H2 O2 levels and antioxidant-related enzymes between genotypes at elevated temperature. Further, anther respiration rate was found to be lower at high temperature in both bean varieties. Overall, our results support the hypothesis that enhanced male reproductive heat tolerance involves changes in the anther oxidative pentose phosphate pathway, which supplies reductants to critical H2 O2 scavenging enzymes.


Subject(s)
Flowers/enzymology , Glucosephosphate Dehydrogenase/metabolism , Phaseolus/physiology , Plant Proteins/metabolism , Thermotolerance/physiology , Antioxidants/metabolism , Ascorbic Acid/metabolism , Carbohydrate Metabolism , Carbon , Flowers/physiology , Glutathione/metabolism , Hot Temperature , Hydrogen Peroxide/metabolism , Plant Leaves/metabolism , Plant Proteins/genetics , Pollen/physiology , Sucrose/metabolism
16.
Plant Sci ; 305: 110835, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33691969

ABSTRACT

Anthocyanins are important flavonoid pigments in plants. Malonyl CoA is an important intermediate in anthocyanin synthesis, and citrate, formed by citrate synthase (CS) catalysing oxaloacetate, is the precursor for the formation of malonyl-CoA. CS is composed of two isoforms, mitochondrial citrate synthase (mCS), a key enzyme of the tricarboxylic acid (TCA) cycle, and citrate synthase (CSY) localizated in microbodies in plants. However, no CS isoform involvement in anthocyanin synthesis has been reported. In this study, we identified the entire CS family in petunia (Petunia hybrida): PhmCS, PhCSY1 and PhCSY2. We obtained petunia plants silenced for the three genes. PhmCS silencing resulted in abnormal development of leaves and flowers. The contents of citrate and anthocyanins were significantly reduced in flowers in PhmCS-silenced plants. However, silencing of PhCSY1 and/or PhCSY2 did not cause a visible phenotype change in petunia. These results showed that PhmCS is involved in anthocyanin synthesis and the development of leaves and flowers, and that the citrate involved in anthocyanin synthesis mainly derived from mitochondria rather than microbodies in petunia.


Subject(s)
Anthocyanins/biosynthesis , Anthocyanins/genetics , Citrate (si)-Synthase/genetics , Citrate (si)-Synthase/metabolism , Flowers/enzymology , Flowers/genetics , Petunia/enzymology , Petunia/genetics , Gene Expression Regulation, Plant , Genes, Mitochondrial
17.
Food Chem ; 345: 128741, 2021 May 30.
Article in English | MEDLINE | ID: mdl-33601650

ABSTRACT

Bovine whey protein was hydrolysed using cardosins A and B purified from dried flowers of Cynara cardunculus by combining diafiltration, anion-exchange chromatography and ultrafiltration. The proteolysis experiments were performed using different whey protein concentrations and enzyme/substrate (E/S) ratios. Complete hydrolysis of the main whey proteins, ß-Lactoglobulin (ß-Lg) and α-lactalbumin (α-La), was achieved after 4 h, at E/S ratios of 1/150 U/mg, regardless the initial protein concentration. In previous reports, the authors suggested that cardosins could not hydrolyse ß-lactoblogulin. However, our promising results open up new possibilities to further explore the action of cardosins on whey proteins for the production of bioactive peptides.


Subject(s)
Aspartic Acid Endopeptidases/metabolism , Cynara/enzymology , Lactoglobulins/metabolism , Plant Proteins/metabolism , Animals , Antioxidants/metabolism , Aspartic Acid Endopeptidases/isolation & purification , Cattle , Chromatography, High Pressure Liquid , Chromatography, Reverse-Phase , Flowers/enzymology , Flowers/metabolism , Hydrolysis , Lactalbumin/metabolism , Lactoglobulins/analysis , Plant Proteins/isolation & purification , Substrate Specificity
18.
Biomolecules ; 11(2)2021 01 25.
Article in English | MEDLINE | ID: mdl-33503885

ABSTRACT

Lipoxygenases are widespread enzymes that catalyze oxidation of polyunsaturated fatty acids (linoleic, linolenic, and arachidonic acid) to produce hydroperoxides. Lipoxygenase reactions can be desirable, but also lipoxygenases can react in undesirable ways. Most of the products of lipoxygenase reactions are aromatic compounds that can affect food properties, especially during long-term storage. Lipoxygenase action on unsaturated fatty acids could result in off-flavor/off-odor development, causing food spoilage. In addition, lipoxygenases are present in the human body and play an important role in stimulation of inflammatory reactions. Inflammation is linked to many diseases, such as cancer, stroke, and cardiovascular and neurodegenerative diseases. This review summarized recent research on plant families and species that can inhibit lipoxygenase activity.


Subject(s)
Fatty Acids, Unsaturated/chemistry , Inflammation/drug therapy , Lipoxygenase Inhibitors/pharmacology , Oxygen/chemistry , Plant Extracts/pharmacology , Animals , Arachidonate 15-Lipoxygenase/biosynthesis , Arachidonate 5-Lipoxygenase/biosynthesis , Arachidonic Acid , Fatty Acids , Flowers/enzymology , Humans , Hydrogen Peroxide/chemistry , Inhibitory Concentration 50 , Lipoxygenase/metabolism , Lipoxygenase Inhibitors/chemistry , Oxidation-Reduction , Plant Leaves/enzymology , Polyphenols/chemistry
19.
Plant Cell Rep ; 40(2): 361-374, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33392730

ABSTRACT

KEY MESSAGE: MANNANASE7 gene in Brassica napus L. encodes a hemicellulose which located at cell wall or extracellular space and dehiscence-resistance can be manipulated by altering the expression of MANNANASE7. Silique dehiscence is an important physiological process in plant reproductive development, but causes heavy yield loss in crops. The lack of dehiscence-resistant germplasm limits the application of mechanized harvesting and greatly restricts the rapeseed (Brassica napus L.) production. Hemicellulases, together with cellulases and pectinases, play important roles in fruit development and maturation. The hemicellulase gene MANNANASE7 (MAN7) was previously shown to be involved in the development and dehiscence of Arabidopsis (Arabidopsis thaliana) siliques. Here, we cloned BnaA07g12590D (BnMAN7A07), an AtMAN7 homolog from rapeseed, and demonstrate its function in the dehiscence of rapeseed siliques. We found that BnMAN7A07 was expressed in both vegetative and reproductive organs and significantly highly expressed in leaves, flowers and siliques where the abscission or dehiscence process occurs. Subcellular localization experiment showed that BnMAN7A07 was localized in the cell wall. The biological activity of the BnMAN7A07 protein isolated and purified through prokaryotic expression system was verified to catalyse the decomposition of xylan into xylose. Phenotypic studies of RNA interference (RNAi) lines revealed that down-regulation of BnMAN7A07 in rapeseed could significantly enhance silique dehiscence-resistance. In addition, the expression of upstream silique development regulators is altered in BnMAN7A07-RNAi plants, suggesting that a possible feedback regulation mechanism exists in the regulation network of silique dehiscence. Our results demonstrate that dehiscence-resistance can be manipulated by altering the expression of hemicellulase gene BnMAN7A07, which could provide an available genetic resource for breeding practice in rapeseed which is beneficial to mechanized harvest.


Subject(s)
Brassica napus/enzymology , Glycoside Hydrolases/metabolism , Polysaccharides/metabolism , Arabidopsis/enzymology , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Brassica napus/genetics , Cell Wall/enzymology , Down-Regulation , Extracellular Space/enzymology , Flowers/enzymology , Flowers/genetics , Gene Expression Regulation, Plant , Glycoside Hydrolases/genetics , Mannosidases/genetics , Mannosidases/metabolism , Plant Breeding , Plant Leaves/enzymology , Plant Leaves/genetics , Plant Proteins/genetics , Plant Proteins/metabolism
20.
Int J Mol Sci ; 21(22)2020 Nov 13.
Article in English | MEDLINE | ID: mdl-33202940

ABSTRACT

In addition to the well-known diterpenoid steviol glycosides, Stevia rebaudiana (Stevia) produces many labdane-type diterpenoids and a wide range of mono- and sesquiterpenoids. However, biosynthesis of mono- and sesquiterpenoids in Stevia remains unknown. Here we analyzed the extracts of Stevia leaves, flowers, stems, and roots by Gas Chromatography-Mass Spectrometry and putatively identified a total of 69 volatile organic compounds, most of which were terpenoids with considerably varied quantities among the four tissues of Stevia. Using Stevia transcriptomes, we identified and functionally characterized five terpene synthases (TPSs) that produced major mono- and sesquiterpenoids in Stevia. Transcript levels of these Stevia TPSs and levels of corresponding terpenoids correlated well in Stevia tissues. Particularly, the root-specific SrTPS4 and SrTPS5 catalyzed the formation of γ-curcumene/zingiberene/ß-sesquiphellandrene and α-longipinene/ß-himachalene/himachalol as multifunctional sesqui-TPSs, respectively. Most of the SrTPSs were highly responsive to various environmental stresses in a tissue-specific manner. Taken together, our results provide new insights into how Stevia produces diverse terpenoids to confer differential responses to various environmental factors in each tissue.


Subject(s)
Alkyl and Aryl Transferases/biosynthesis , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Plant Proteins/biosynthesis , Stevia/enzymology , Alkyl and Aryl Transferases/genetics , Flowers/enzymology , Flowers/genetics , Plant Leaves/enzymology , Plant Leaves/genetics , Plant Proteins/genetics , Plant Roots/enzymology , Plant Roots/genetics , Stevia/genetics , Terpenes/metabolism
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