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1.
Am J Med Genet A ; 194(5): e63520, 2024 May.
Article in English | MEDLINE | ID: mdl-38168117

ABSTRACT

Split-hand/foot malformation (SHFM) is a genetically heterogeneous congenital limb reduction defect characterized by the deficiencies of central rays of the autopod. Tandem duplications at 10q24 locus account for approximately 20% of all SHFM cases. Here, we report five affected individuals from four unrelated Indian families with SHFM3 caused by microduplication of 10q24 locus showing varied clinical presentations. This report substantiates and extends the current understanding of this rare, multifaceted, and complex condition.


Subject(s)
Foot Deformities, Congenital , Hand Deformities, Congenital , Limb Deformities, Congenital , Humans , Hand Deformities, Congenital/diagnosis , Hand Deformities, Congenital/genetics , Foot Deformities, Congenital/diagnosis , Foot Deformities, Congenital/genetics , India/epidemiology , Limb Deformities, Congenital/diagnosis , Limb Deformities, Congenital/genetics , Pedigree
2.
Eur J Med Genet ; 66(3): 104711, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36702441

ABSTRACT

BACKGROUND: Hand-Foot-Genital Syndrome (HFGS) is an autosomal dominant disorder characterized by a broad phenotypic spectrum. Variants in HOXA13 gene were associated with HFGS. To date, only twenty families with HFGS have been reported. However, the challenge in HFGS is the limited sample sizes and phenotypic heterogeneity. The advent of next-generation sequencing has permitted the identification of patients with HOXA13 variants who do not manifest with the full HFGS syndromic features. METHODS: Trio (parents-proband) Whole-exome sequence(WES) and whole-genome sequencing(WGS) was carried out in this study to investigate the underlying pathogenic genetic factor of the neonate with a wide variety of clinical abnormalities. RESULTS: No possible pathogenetic variation was detected by trio-WES, and a duplication variant in HOXA13 (c.360_377dup, p.Ala128_Ala133dup), inherited from her mother, was identified by the subsequent WGS in the proband with malnutrition, feeding difficulties, electrolyte disorders, metabolic acidosis, recurrent urinary tract infections, hydronephrosis, nephrolithiasis, abnormal ureter morphology, cholelithiasis, uterus didelphys. Sequence analysis of the variant region (exon1) indicated a high GC content of 73.92%. In addition, further enquiry of the family history revealed that 5 members of the family in 4 generations had hand and foot anomalies. CONCLUSION: The neonate was diagnosed with HFGS by genetic analysis. GC content had less influence on sequence coverage in WGS than WES analysis. This was the first report of trio-WGS study for HFGS genetic diagnosis, revealed that subsequent WGS was necessary for identification of potentially pathogenic variants in unexplained genetic disorders.


Subject(s)
Foot Deformities, Congenital , Hand Deformities, Congenital , Urogenital Abnormalities , Female , Humans , Infant, Newborn , Foot Deformities, Congenital/genetics , Genes, Homeobox , Hand Deformities, Congenital/genetics , Hand Deformities, Congenital/diagnosis , Urogenital Abnormalities/genetics
3.
Rev. cuba. ortop. traumatol ; 36(3)sept. 2022. ilus
Article in Spanish | LILACS, CUMED | ID: biblio-1441773

ABSTRACT

Introducción: La hemimelia tibial o hemimelia paraxial longitudinal tibial, es una deficiencia congénita de la tibia. Esta deficiencia de los miembros inferiores longitudinal tibial, es muy rara y su frecuencia está en el orden de 1: 1 000 000 de niños nacidos vivos. Objetivo: Presentar un caso de hemimelia tibial diagnosticado por medio del cuadro clínico y radiografías y tratado quirúrgicamente. Presentación del caso: Paciente masculino de dos horas de nacido, atendido por presentar malformación congénita a nivel de la pierna derecha que se presentaba acortada con una prominencia dura a nivel proximal y el pie con deformidad marcada en supinación, aducción y rotación interna. Se realizó examen físico exhaustivo de la extremidad afecta y se constató el acortamiento evidente de la misma. Se indicó radiografía anteroposterior y lateral de la pierna y se observó que el segmento proximal de la tibia y el peroné estaban bien, pero con implantación alta, por lo que se diagnosticó una hemimelia tibial tipo II de Jones. Luego del alta el niño recibió seguimiento por consulta de Genética y el servicio de Ortopedia donde se decidió someterlo a un primer tiempo quirúrgico a los 6 meses de edad, mediante tibialización del peroné. A los 10 meses se realizó un segundo tiempo quirúrgico para centrar el astrágalo al peroné. Conclusiones: La hemimelia tibial se considera un diagnóstico poco frecuente en nuestro medio. No existe prevención conocida. El tratamiento es complejo y altamente especializado, y en algunos casos requiere la amputación temprana del miembro afectado para adaptar al paciente al uso de prótesis(AU)


Introduction: Tibial hemimelia or tibial longitudinal paraxial hemimelia is a congenital deficiency of the tibia. This tibial longitudinal lower limb deficiency is very rare and its frequency is in the order of 1: 1,000,000 live births. Objective: To report a case of tibial hemimelia diagnosed through the clinical condition and radiographs and treated surgically. Case report: We report the case of a two-hour-old male patient, treated for a congenital malformation at the level of the right leg that was shortened with a hard prominence at the proximal level and the foot with marked deformity in supination, adduction and internal rotation. An exhaustive physical examination of the affected limb was carried out and its evident shortening was confirmed. Anteroposterior and lateral X-rays of the leg were indicated and it revealed that the proximal segment of the tibia and fibula were fine, but with high implantation, for which a Jones type II tibial hemimelia was diagnosed. After discharge, the child was followed up by the Genetics consultation and the Orthopedics service, where it was decided to undergo a first stage surgery at 6 months of age, by means of tibialization of the fibula. At 10 months, a second surgical time was performed to center the talus to the fibula. Conclusions: Tibial hemimelia is considered a rare diagnosis in our setting. There is no known prevention. Treatment is complex and highly specialized, and in some cases requires early amputation of the affected limb to adapt the patient to the use of a prosthesis(AU)


Subject(s)
Humans , Male , Infant, Newborn , Tibia/abnormalities , Foot Deformities, Congenital/genetics , Ectromelia/surgery , Ectromelia/diagnostic imaging , Leg/abnormalities , Natural Childbirth/methods
4.
J Hand Surg Asian Pac Vol ; 27(4): 742-746, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35965362

ABSTRACT

Laurin-Sandrow syndrome (LSS) is an extremely rare syndrome of mirror hand and leg with less than 20 cases reported in literature. The syndrome has been attributed to a mutation in the MIPOL-1 (mirror-image polydactyly) gene located on locus 14q13.3-q21 coding for CCDC193 (coiled-coli domain containing 193) protein. It is characterised by limb, facial and central nervous system anomalies with the most constant being fibular dimelia with fibular ray duplication, polydactyly with secondary deformities of fixed equinus, knee joint instability and flexion deformity. It is associated less frequently with ulnar dimelia, thumb aplasia/hypoplasia, ulnar ray duplication, symbrachypolydactyly, 'rosette' hands, facial dysmorphism like hypertelorism, broad columella and flat nose, CNS anomalies like aplasia/hypoplasia of corpus callosum, hydrocephalus and muscular dystonia. We report a 2-year-old male child with LSS and perform a literature review to expound on this rare syndrome. Level of Evidence: Level V (Therapeutic).


Subject(s)
Abnormalities, Multiple , Ectromelia , Foot Deformities, Congenital , Hand Deformities, Congenital , Abnormalities, Multiple/genetics , Child , Child, Preschool , Foot Deformities, Congenital/genetics , Humans , Male , Nose/abnormalities , Syndrome
5.
Clin Genet ; 102(5): 451-456, 2022 11.
Article in English | MEDLINE | ID: mdl-35908152

ABSTRACT

Split hand/foot malformation (SHFM) is a clinically heterogeneous genetic disorder, which is mainly characterized by median clefts of the hand/feet due to the absence of the central digital rays. Several subgroups of SHFM have been identified, including SHFM1 to SHFM6. SHFM3 is an autosomal dominant disease, which has been identified to associate with a 500 kb microduplication at 10q24. The duplication involved several genes, including LBX1, BTRC, POLL, FBXW4, and so forth. In the study, using trio clinical exome sequencing, a 120 kb microduplication containing only BTRC were identified in a Chinese family affected with SHFM3. Further confirmation was performed using qRT-PCR assay, which showed that the 120 kb duplication was co-segregated with SHFM phenotypes in the family. It is the smallest duplication which has ever been reported relating to SHFM3. Furthermore, the transcription levels of BTRC mRNA in lymphocyte of the proband was significantly higher than that in the healthy control. The study provided evidence for the limb malformation caused by abnormal BTRC expression, and suggested that next generation sequencing could provide more precise diagnosis to SHFM3 patients.


Subject(s)
Foot Deformities, Congenital , Hand Deformities, Congenital , Limb Deformities, Congenital , China , Foot Deformities, Congenital/genetics , Hand Deformities, Congenital/genetics , Humans , Limb Deformities, Congenital/genetics , Micrognathism , Pedigree , RNA, Messenger
6.
Mol Genet Genomic Med ; 10(5): e1933, 2022 05.
Article in English | MEDLINE | ID: mdl-35332702

ABSTRACT

OBJECTIVE: Analyze the clinical and genetic characteristics of a rare Chinese family with Multiple synostoses syndrome and identify the causative variant with the high-throughput sequencing approach. METHODS: The medical history investigation, physical examination, imaging examination, and audiological examination of the family members were performed. DNA samples were extracted from the family members. The candidate variant was identified by performing whole-exome sequencing of the proband, then verified by Sanger sequencing in the family. RESULTS: The family named HBSY-018 from Hubei province had 18 subjects in three generations, and six subjects were diagnosed with conductive or mixed hearing loss. Meanwhile, characteristic features including short philtrum, hemicylindrical nose, and hypoplastic alae nasi were noticed among those patients. Symptoms of proximal interdigital joint adhesion and inflexibility were found. The family was diagnosed as Multiple synostoses syndrome type 1 (SYNS1).The inheritance pattern of this family was autosomal dominant. A novel mutation in the NOG gene c.533G>A was identified by performing whole-exome sequencing of the proband. The substitution of cysteine encoding 178th position with tyrosine (p.Cys178Tyr) was caused by this mutation, which was conserved across species. Co-segregation of disease phenotypes was demonstrated by the family verification. CONCLUSION: The family diagnosed as SYNS1 was caused by the novel mutation (c.533G>A) of NOG. The combination of clinical diagnosis and molecular diagnosis had improved the understanding of this rare disease and provided a scientific basis for genetic counseling in the family.


Subject(s)
Foot Deformities, Congenital , Synostosis , Carpal Bones/abnormalities , Foot Deformities, Congenital/genetics , Hand Deformities, Congenital , Humans , Mutation , Pedigree , Stapes/abnormalities , Synostosis/genetics , Tarsal Bones/abnormalities
7.
Clin Dysmorphol ; 31(3): 109-112, 2022 Jul 01.
Article in English | MEDLINE | ID: mdl-35256564

ABSTRACT

INTRODUCTION: Laurin-Sandrow syndrome also known as tetramelic mirror-image polydactyly is a rare congenital disorder characterized classically by polysyndactyly of the hands, mirror feet and nose anomalies (hypoplasia of the nasal alae and short columella) often associated with ulnar and/or fibular duplication. As a pathologic entity, it is heterogeneous, the patients displaying a variety of symptoms. This review aims to analyze the different aspects of the condition, such as clinical findings and methods of treatment to summarize the principal features of Laurin-Sandrow syndrome. MATERIALS AND METHODS: The review is based on searches on PubMed, Web of Science and Researchgate of the following terms: "Laurin-Sandrow syndrome", "mirror hands", "mirror feet", "tetramelic mirror-image polydactyly", "fibular dimelia" and "ulnar dimelia". Clinical cases, reviews and original articles were included. RESULTS: As a consequence of our findings, we suggest a modification of the Al-Qattan classification system for Mirror Hand-Multiple Hand Spectrum. CONCLUSION: Even though it has an extremely low incidence, a thorough understanding of the syndrome enables the surgeon to choose the appropriate treatment with the ultimate goal to improve the patient's life quality.


Subject(s)
Abnormalities, Multiple , Ectromelia , Foot Deformities, Congenital , Hand Deformities, Congenital , Polydactyly , Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/pathology , Ectromelia/pathology , Foot Deformities, Congenital/diagnosis , Foot Deformities, Congenital/genetics , Hand Deformities, Congenital/diagnosis , Humans , Nose/abnormalities , Polydactyly/diagnosis , Polydactyly/genetics
8.
Hum Genet ; 141(2): 217-227, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34821995

ABSTRACT

Cooks syndrome (CS) is an ultrarare limb malformation due to in tandem microduplications involving KCNJ2 and extending to the 5' regulatory element of SOX9. To date, six CS families were resolved at the molecular level. Subsequent studies explored the evolutionary and pathological complexities of the SOX9-KCNJ2/Sox9-Kcnj2 locus, and suggested a key role for the formation of novel topologically associating domain (TAD) by inter-TAD duplications in causing CS. Here, we report a unique case of CS associated with a de novo 1;17 translocation affecting the KCNJ2 locus. On chromosome 17, the breakpoint mapped between KCNJ16 and KCNJ2, and combined with a ~ 5 kb deletion in the 5' of KCNJ2. Based on available capture Hi-C data, the breakpoint on chromosome 17 separated KCNJ2 from a putative enhancer. Gene expression analysis demonstrated downregulation of KCNJ2 in both patient's blood cells and cultured skin fibroblasts. Our findings suggest that a complex rearrangement falling in the 5' of KCNJ2 may mimic the developmental consequences of in tandem duplications affecting the SOX9-KCNJ2/Sox9-Kcnj2 locus. This finding adds weight to the notion of an intricate role of gene regulatory regions and, presumably, the related three-dimensional chromatin structure in normal and abnormal human morphology.


Subject(s)
Fingers/abnormalities , Foot Deformities, Congenital/genetics , Gene Rearrangement , Hand Deformities, Congenital/genetics , Potassium Channels, Inwardly Rectifying/genetics , Regulatory Sequences, Nucleic Acid , Adolescent , Adult , Chromosome Breakpoints , Chromosomes, Human, Pair 1/genetics , Chromosomes, Human, Pair 17/genetics , Facies , Female , Humans , In Situ Hybridization, Fluorescence , Male , Potassium Channels, Inwardly Rectifying/chemistry , Sequence Deletion , Translocation, Genetic , Young Adult
9.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 38(12): 1208-1210, 2021 Dec 10.
Article in Chinese | MEDLINE | ID: mdl-34839508

ABSTRACT

OBJECTIVE: To analyze the molecular genetics of a Chinese pedigree with congenital hand foot cleft. METHODS: Single nucleotide polymorphism microarray (SNP array) was used to analyze the whole genome copy number variation. RESULTS: SNP array analysis showed that there was a 433 kb repeat in 10q24.31-10q24.32 region, which contained LBX1, BTRC, POLL, OPCD and FBXW4 genes. CONCLUSION: Microduplication of chromosome 10q24.31-10q24.32 may be the cause of congenital hand foot cleft in this pedigree.


Subject(s)
Foot Deformities, Congenital , Hand Deformities, Congenital , China , DNA Copy Number Variations/genetics , Foot Deformities, Congenital/genetics , Hand Deformities, Congenital/genetics , Humans , Pedigree
10.
BMC Med Genomics ; 14(1): 254, 2021 10 27.
Article in English | MEDLINE | ID: mdl-34706719

ABSTRACT

BACKGROUND: The switch/sucrose nonfermenting (SWI/SNF) complex is an adenosine triphosphate-dependent chromatin-remodeling complex associated with the regulation of DNA accessibility. Germline mutations in the components of the SWI/SNF complex are related to human developmental disorders, including the Coffin-Siris syndrome (CSS), Nicolaides-Baraitser syndrome (NCBRS), and nonsyndromic intellectual disability. These disorders are collectively referred to as SWI/SNF complex-related intellectual disability disorders (SSRIDDs). METHODS: Whole-exome sequencing was performed in 564 Korean patients with neurodevelopmental disorders. Twelve patients with SSRIDDs (2.1%) were identified and their medical records were retrospectively analyzed. RESULTS: ARID1B, found in eight patients, was the most frequently altered gene. Four patients harbored pathogenic variants in SMARCA4, SMARCB1, ARID2, and SMARCA2. Ten patients were diagnosed with CSS, and one patient without a typical phenotype was diagnosed with ARID1B-related nonsyndromic intellectual disability. Another patient harboring the SMARCA2 pathogenic variant was diagnosed with NCBRS. All pathogenic variants in ARID1B were truncating, whereas variants in SMARCA2, SMARCB1, and SMARCA4 were nontruncating (missense). Frequently observed phenotypes were thick eyebrows (10/12), hypertrichosis (8/12), coarse face (8/12), thick lips (8/12), and long eyelashes (8/12). Developmental delay was observed in all patients, and profound speech delay was also characteristic. Agenesis or hypoplasia of the corpus callosum was observed in half of the patients (6/12). CONCLUSIONS: SSRIDDs have a broad disease spectrum, including NCBRS, CSS, and ARID1B-related nonsyndromic intellectual disability. Thus, SSRIDDs should be considered as a small but important cause of human developmental disorders.


Subject(s)
Abnormalities, Multiple/genetics , Face/abnormalities , Foot Deformities, Congenital/genetics , Hand Deformities, Congenital/genetics , Hypotrichosis/genetics , Intellectual Disability/genetics , Micrognathism/genetics , Neck/abnormalities , Phenotype , Facies , Female , Genotype , Humans , Infant , Infant, Newborn , Male , Republic of Korea
11.
Eur J Med Genet ; 64(11): 104323, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34474177

ABSTRACT

Transcription factor IID is a multimeric protein complex that is essential for the initiation of transcription by RNA polymerase II. One of its critical components, the TATA-binding protein-associated factor 2, is encoded by the gene TAF2. Pathogenic variants of this gene have been shown to be responsible for the Mental retardation, autosomal recessive 40 syndrome. This syndrome is characterized by severe intellectual disability, postnatal microcephaly, pyramidal signs and thin corpus callosum. Until now, only three families have been reported separately. Here we report four individuals, from two unrelated families, who present with severe intellectual disability and global developmental delay, postnatal microcephaly, feet deformities and thin corpus callosum and who carry homozygous TAF2 missense variants detected by Exome Sequencing. Taken together, our findings and those of previously reported subjects allow us to further delineate the clinical phenotype associated with TAF2 biallelic mutations.


Subject(s)
Developmental Disabilities/genetics , Foot Deformities, Congenital/genetics , Microcephaly/genetics , Phenotype , TATA-Binding Protein Associated Factors/genetics , Transcription Factor TFIID/genetics , Adolescent , Adult , Alleles , Child , Child, Preschool , Corpus Callosum/pathology , Developmental Disabilities/pathology , Female , Foot Deformities, Congenital/pathology , Humans , Male , Microcephaly/pathology
12.
Mol Genet Genomic Med ; 9(9): e1763, 2021 09.
Article in English | MEDLINE | ID: mdl-34296532

ABSTRACT

BACKGROUND: Nicolaides-Baraitser syndrome (NCBRS) is a severe neurodevelopmental disorder with multiple abnormalities. To date, all pathogenic variants in SMARCA2 causing NCBRS are de novo and most are missense variants located in the ATPase domain of SMARCA2 protein. METHODS: In this study, a familial trio whole-exome sequencing was performed on the proband presenting with intellectual disability, early-onset epilepsy, and autistic features. A novel missense variant c.553C>G (p.Gln185Glu) in SMARCA2 was identified, which is located in the QLQ domain. The same variant was subsequently also found in the mother's ongoing pregnancy. Samples from accessible tissues such as saliva and sperm other than blood were collected from the parents, and the detection of the target variant was performed by amplicon-based deep sequencing. RESULTS: Low-level mosaicism of the target variant c.553C>G (p.Gln185Glu) was detected in the father's sperm with allele fraction of 2.8% by amplicon-based deep sequencing, which was not detected in either parents' blood or saliva specimens. Heterozygosity of this variant was confirmed in the proband. CONCLUSION: This is the first report of paternal germline mosaicism for a SMARCA2 disease-causing variant. In addition, the missense variant c.553C>G (p.Gln185Glu) in the QLQ domain causes mainly neurological and developmental phenotypes with unremarkable characteristic facial features and limb abnormalities. Our findings expand the phenotypic spectrum and mode of genetic transmission associated with the SMARCA2 variants.


Subject(s)
Foot Deformities, Congenital/genetics , Germ-Line Mutation , Hypotrichosis/genetics , Intellectual Disability/genetics , Mosaicism , Phenotype , Transcription Factors/genetics , Cells, Cultured , Child , Facies , Foot Deformities, Congenital/pathology , Humans , Hypotrichosis/pathology , Intellectual Disability/pathology , Male , Mutation, Missense , Transcription Factors/chemistry
13.
Mol Vis ; 27: 309-322, 2021.
Article in English | MEDLINE | ID: mdl-34035645

ABSTRACT

Purpose: Oculodentodigital dysplasia (ODDD) is a group disorder caused by GJA1 variants, of which glaucoma leading to blindness is a frequent complication of the ocular phenotype. In this study, the correlation of the GJA1 genotype with the ocular phenotype was analyzed systematically. Methods: GJA1 variants were collected from in-house whole-exome sequencing data of 5,307 individuals. Potentially pathogenic variants (PPVs) were defined based on prediction of multiple in silico tools, related phenotypes, and previously established evidence. The characteristics of GJA1 PPVs were evaluated based on our data, gnomAD, and HGMD. Results: In total, 21 rare variants in GJA1 were detected in 32 subjects from the study cohort. Four of the 21 variants were classified as PPVs, including two frameshift, one missense, and one in-frame deletion. The four PPVs were detected in four probands with microcornea or high hyperopia; two developed glaucoma. A systematic review of GJA1 variants in literature suggested that most heterozygous missense PPVs are located inside the connexin domain. All truncations downstream of the connexin domain are associated with autosomal dominant disease, while most truncations within the domain are associated with autosomal recessive ODDD. Ocular signs were present in 80.0% (116/145) of patients with GJA1 PPVs. Of the 116 patients, glaucoma was observed in 26.7% (31/116), among whom 77.4% (24/31) of cases occurred in patients ≥10 years old. Conclusions: Eye abnormalities are the most common signs associated with GJA1 PPVs, and they carry a high risk of developing glaucoma. The identification of GJA1 PPVs needs further attention and clarification.


Subject(s)
Connexin 43/genetics , Craniofacial Abnormalities/genetics , Eye Abnormalities/genetics , Foot Deformities, Congenital/genetics , Mutation, Missense/genetics , Syndactyly/genetics , Tooth Abnormalities/genetics , Adult , Child , Female , Glaucoma/genetics , Heterozygote , Humans , Male , Middle Aged , Pedigree , Phenotype , Visual Acuity/physiology , Exome Sequencing
14.
Nat Commun ; 12(1): 2282, 2021 04 16.
Article in English | MEDLINE | ID: mdl-33863876

ABSTRACT

Acheiropodia, congenital limb truncation, is associated with homozygous deletions in the LMBR1 gene around ZRS, an enhancer regulating SHH during limb development. How these deletions lead to this phenotype is unknown. Using whole-genome sequencing, we fine-mapped the acheiropodia-associated region to 12 kb and show that it does not function as an enhancer. CTCF and RAD21 ChIP-seq together with 4C-seq and DNA FISH identify three CTCF sites within the acheiropodia-deleted region that mediate the interaction between the ZRS and the SHH promoter. This interaction is substituted with other CTCF sites centromeric to the ZRS in the disease state. Mouse knockouts of the orthologous 12 kb sequence have no apparent abnormalities, showcasing the challenges in modelling CTCF alterations in animal models due to inherent motif differences between species. Our results show that alterations in CTCF motifs can lead to a Mendelian condition due to altered enhancer-promoter interactions.


Subject(s)
CCCTC-Binding Factor/genetics , Extremities/embryology , Foot Deformities, Congenital/genetics , Gene Expression Regulation, Developmental , Hand Deformities, Congenital/genetics , Animals , Binding Sites/genetics , Chromatin Immunoprecipitation Sequencing , Disease Models, Animal , Embryo, Mammalian , Enhancer Elements, Genetic/genetics , Exons/genetics , Female , Genetic Loci , Genetic Testing , Hedgehog Proteins/genetics , Humans , Introns/genetics , Male , Membrane Proteins/genetics , Mice , Mice, Knockout , Promoter Regions, Genetic/genetics , Sequence Deletion , Species Specificity , Whole Genome Sequencing
15.
Hum Genet ; 140(7): 1061-1076, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33811546

ABSTRACT

Teebi hypertelorism syndrome (THS; OMIM 145420) is a rare craniofacial disorder characterized by hypertelorism, prominent forehead, short nose with broad or depressed nasal root. Some cases of THS have been attributed to SPECC1L variants. Homozygous variants in CDH11 truncating the transmembrane and intracellular domains have been implicated in Elsahy-Waters syndrome (EWS; OMIM 211380) with hypertelorism. We report THS due to CDH11 heterozygous missense variants on 19 subjects from 9 families. All affected residues in the extracellular region of Cadherin-11 (CHD11) are highly conserved across vertebrate species and classical cadherins. Six of the variants that cluster around the EC2-EC3 and EC3-EC4 linker regions are predicted to affect Ca2+ binding that is required for cadherin stability. Two of the additional variants [c.164G > C, p.(Trp55Ser) and c.418G > A, p.(Glu140Lys)] are also notable as they are predicted to directly affect trans-homodimer formation. Immunohistochemical study demonstrates that CDH11 is strongly expressed in human facial mesenchyme. Using multiple functional assays, we show that five variants from the EC1, EC2-EC3 linker, and EC3 regions significantly reduced the cell-substrate trans adhesion activity and one variant from EC3-EC4 linker results in changes in cell morphology, focal adhesion, and migration, suggesting dominant negative effect. Characteristic features in this cohort included depressed nasal root, cardiac and umbilical defects. These features distinguished this phenotype from that seen in SPECC1L-related hypertelorism syndrome and CDH11-related EWS. Our results demonstrate heterozygous variants in CDH11, which decrease cell-cell adhesion and increase cell migratory behavior, cause a form of THS, as termed CDH11-related THS.


Subject(s)
Abnormalities, Multiple/genetics , Cadherins/genetics , Cell Adhesion/genetics , Craniofacial Abnormalities/genetics , Foot Deformities, Congenital/genetics , Genetic Variation/genetics , Hand Deformities, Congenital/genetics , Hypertelorism/genetics , Amino Acid Sequence , Cell Movement/genetics , Female , Heterozygote , Homozygote , Humans , Male , Pedigree , Phenotype
17.
BMJ Case Rep ; 14(1)2021 Jan 11.
Article in English | MEDLINE | ID: mdl-33431460

ABSTRACT

Oculodentodigital dysplasia (ODDD) is a rare congenital disorder characterised by developmental abnormalities of the eye, dentition and digits of the hands and feet, with neurological symptoms reported in 30% of individuals. Dental anomalies associated with ODDD include enamel hypoplasia and subsequent caries, microdontia, missing teeth, amelogenesis imperfecta, pulp stones and delayed tooth development. Here, we describe the comprehensive dental management of a 3-year-old girl who presented with rapid deterioration of the primary dentition due to generalised enamel hypomineralisation. Conservative, comprehensive restorative management was performed under general anaesthesia. Within 6 months, further breakdown of the remaining unrestored enamel was noted. This case documents the challenges of conservative management in dental anomalies that are not well documented due to the extreme rarity of the disorder.


Subject(s)
Craniofacial Abnormalities/complications , Dental Care for Children/methods , Dental Enamel Hypoplasia/therapy , Eye Abnormalities/complications , Foot Deformities, Congenital/complications , Syndactyly/complications , Tooth Abnormalities/complications , Anesthesia, General , Child, Preschool , Craniofacial Abnormalities/diagnosis , Craniofacial Abnormalities/genetics , Craniofacial Abnormalities/therapy , Crowns , Dental Care for Children/adverse effects , Dental Care for Children/instrumentation , Dental Enamel/diagnostic imaging , Dental Enamel Hypoplasia/diagnosis , Dental Enamel Hypoplasia/genetics , Eye Abnormalities/diagnosis , Eye Abnormalities/genetics , Eye Abnormalities/therapy , Female , Foot Deformities, Congenital/diagnosis , Foot Deformities, Congenital/genetics , Foot Deformities, Congenital/therapy , Humans , Pain, Procedural/etiology , Pain, Procedural/prevention & control , Pedigree , Pit and Fissure Sealants , Radiography, Dental , Syndactyly/diagnosis , Syndactyly/genetics , Syndactyly/therapy , Tooth Abnormalities/diagnosis , Tooth Abnormalities/genetics , Tooth Abnormalities/therapy , Tooth, Deciduous/diagnostic imaging
18.
J Plast Reconstr Aesthet Surg ; 74(8): 1840-1847, 2021 Aug.
Article in English | MEDLINE | ID: mdl-33384233

ABSTRACT

The role of the plantar nerve in the pathogenesis of macrodactyly of the foot is unknown. We investigated the distribution of affected toes and forefoot in 27 feet of 26 patients with pedal macrodactyly, and how this relates to innervation of the affected plantar nerve. A preoperative ultrasound examination was performed to determine the diameter and structure of the plantar nerve. Histologic findings were recorded during surgery. The microstructure of affected plantar nerves was evaluated by hematoxylin-eosin staining, while S100 expression was assessed by immunofluorescence analysis. Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha (PIK3CA) gene mutation in the affected nerve tissue was detected by Sanger DNA sequencing. The affected toes and forefoot involved innervation of the medial plantar nerve in 25/27 feet, the lateral plantar nerve in one foot, and both medial and lateral plantar nerves in one foot. All affected plantar nerves, which were accompanied by a fatty strip, were surrounded by or infiltrated with fat. The affected plantar nerves showed enlargement, a tortuous course, fatty infiltration, or a combination of these. Pathologic changes in affected plantar nerves involved only the epineurium and not the perineurium or endoneurium. Expression of the Schwann cell marker S100 was absent in some areas of affected nerves. Sequencing of PIK3CA exons identified a gain-of-function mutation (p.His1047Arg) in affected plantar nerves. These results indicate that pathologic impairment of the plantar nerve can lead to macrodactyly of the foot, which may be considered as a nerve trunk disease.


Subject(s)
Foot Deformities, Congenital/surgery , Tibial Nerve/abnormalities , Child , Child, Preschool , Class I Phosphatidylinositol 3-Kinases/genetics , Female , Foot/innervation , Foot/surgery , Foot Deformities, Congenital/diagnostic imaging , Foot Deformities, Congenital/genetics , Humans , Infant , Male , Mutation , Ultrasonography
19.
Mol Genet Genomic Med ; 9(3): e1604, 2021 03.
Article in English | MEDLINE | ID: mdl-33471964

ABSTRACT

BACKGROUND: Split hand/foot malformation (SHFM) is a congenital limb developmental disorder, which impairs the fine activities of hand/foot in the affected individuals seriously. SHFM is commonly inherited as an autosomal dominant disease with incomplete penetrance. Chromosomal aberrations such as copy number variations and translocations have been linked to SHFM. This study aimed to identify the genetic cause for three patients with bilateral hand and foot malformation in a Chinese family. METHODS: Karyotyping, single-nucleotide polymorphism (SNP) array, whole exome sequencing, whole genome sequencing, and Sanger sequencing were applied to identify the pathogenic variant. RESULTS: Karyotyping revealed that the three patients had balanced reciprocal translocation, 46, XX, t(3;15) (q29;q22). SNP array identified no pathogenic copy number variation in the proband. Trio-WES (fetus-mother-father) sequencing results revealed no pathogenic variants in the genes related to SHFM. Whole-genome low-coverage mate-pair sequencing (WGL-MPS), breakpoint PCR, and Sanger sequencing identified the breakpoints disrupting TP63 in the patients, but not in healthy family members. CONCLUSION: This study firstly reports that a translocation breakpoint disrupting TP63 contributes to the SHFM in a Chinese family, which expands our knowledge of genetic risk and counseling underlying SHFM. It provides a basis for genetic counseling and prenatal diagnosis (preimplantation genetic diagnosis) for this family.


Subject(s)
Foot Deformities, Congenital/genetics , Hand Deformities, Congenital/genetics , Transcription Factors/genetics , Tumor Suppressor Proteins/genetics , Adult , Chromosome Breakpoints , Foot Deformities, Congenital/pathology , Hand Deformities, Congenital/pathology , Humans , Karyotype , Pedigree , Translocation, Genetic , Whole Genome Sequencing
20.
Adv Exp Med Biol ; 1339: 325-329, 2021.
Article in English | MEDLINE | ID: mdl-35023121

ABSTRACT

INTRODUCTION: Oculodentodigital syndrome (ODDS) is a rare genetic disorder caused by mutations in the gap junction GJA1 gene encoding connexin-43 (chromosome 6q22). A typical ODDS case is presented. MATERIAL AND METHODS: A 40-year-old male patient was examined neurologically and genetically. He had a history of recent parieto-occipital leukodystrophy, some episodes of temporary hearing loss, and characteristic facial features of ODDS. Sequencing of the GJA1 gene was performed in patient's total genomic DNA sample isolated from peripheral blood cells. RESULTS: A novel heterozygous missense mutation (443G>A) was identified in the GJA1 gene, resulting in coding for a different amino acid (Arg148Gln). CONCLUSION: The molecular genetic analysis confirmed the diagnosis of ODDS. The novel mutation, located within a calmodulin binding region of connexin-43, probably affects proper channel function.


Subject(s)
Craniofacial Abnormalities , Foot Deformities, Congenital , Syndactyly , Tooth Abnormalities , Adult , Craniofacial Abnormalities/genetics , Eye Abnormalities , Foot Deformities, Congenital/genetics , Humans , Male , Mutation , Phenotype , Syndactyly/genetics , Tooth Abnormalities/genetics
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