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1.
Food Chem ; 347: 128973, 2021 Jun 15.
Article in English | MEDLINE | ID: mdl-33444888

ABSTRACT

To improve the crop yield and quality, the cytosolic fructose-1,6-bisphosphatase (cFBPase) from mung bean (Vigna radiata), a rate-limiting enzyme in gluconeogenesis, was cloned, purified, and structurally characterised. To function it required Mg2+ and Mn2+ at 0.01-10 mM. The Michaelis-Menton constant and adenosine monophosphate (AMP) inhibitory constant (Ki) were 7.96 and 111.09 µM, respectively. The functional site residues of AMP binding (Arg30, Asp32, and Phe33) and the active site residues (Asn218 and Met251) were tested via site-directed mutagenesis and molecular docking. Asn218 and Met251 were replaced by Tyr and Leu, respectively. The M251L mutant showed enhanced substrate affinity and activity, resulting from decreased binding energy (-2.58 kcal·mol-1) and molecular distance (4.2 Å). AMP binding site mutations changed the enzyme activities, indicating a connection between the binding and active sites. Furthermore, Ki and docking analysis revealed that Asp32 plays a key role in maintaining the AMP binding conformation.


Subject(s)
Cytosol/enzymology , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Vigna/enzymology , Vigna/genetics , Adenosine Monophosphate/metabolism , Animals , Binding Sites , Cloning, Molecular , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/metabolism , Kinetics , Molecular Docking Simulation , Mutagenesis, Site-Directed , Vigna/cytology
2.
Acta Crystallogr F Struct Biol Commun ; 76(Pt 11): 524-535, 2020 Nov 01.
Article in English | MEDLINE | ID: mdl-33135671

ABSTRACT

The crystal structure of the class II fructose-1,6-bisphosphatase (FBPaseII) from the important pathogen Francisella tularensis is presented at 2.4 Šresolution. Its structural and functional relationships to the closely related phosphatases from Mycobacterium tuberculosis (MtFBPaseII) and Escherichia coli (EcFBPaseII) and to the dual phosphatase from Synechocystis strain 6803 are discussed. FBPaseII from F. tularensis (FtFBPaseII) was crystallized in a monoclinic crystal form (space group P21, unit-cell parameters a = 76.30, b = 100.17, c = 92.02 Å, ß = 90.003°) with four chains in the asymmetric unit. Chain A had two coordinated Mg2+ ions in its active center, which is distinct from previous findings, and is presumably deactivated by their presence. The structure revealed an approximate 222 (D2) symmetry homotetramer analogous to that previously described for MtFBPaseII, which is formed by a crystallographic dyad and which differs from the exact tetramer found in EcFBPaseII at a 222 symmetry site in the crystal. Instead, the approximate homotetramer is very similar to that found in the dual phosphatase from Synechocystis, even though no allosteric effector was found in FtFBPase. The amino-acid sequence and folding of the active site of FtFBPaseII result in structural characteristics that are more similar to those of the previously published EcFBPaseII than to those of MtFBPaseII. The kinetic parameters of native FtFBPaseII were found to be in agreement with published studies. Kinetic analyses of the Thr89Ser and Thr89Ala mutations in the active site of the enzyme are consistent with the previously proposed mechanism for other class II bisphosphatases. The Thr89Ala variant enzyme was inactive but the Thr89Ser variant was partially active, with an approximately fourfold lower Km and Vmax than the native enzyme. The structural and functional insights derived from the structure of FtFBPaseII will provide valuable information for the design of specific inhibitors.


Subject(s)
Francisella tularensis/enzymology , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Catalytic Domain , Crystallography, X-Ray , Escherichia coli/enzymology , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Models, Molecular , Mycobacterium tuberculosis/enzymology , Protein Conformation , Protein Structure, Quaternary , Synechocystis/enzymology
3.
ACS Appl Mater Interfaces ; 12(1): 1877-1884, 2020 Jan 08.
Article in English | MEDLINE | ID: mdl-31816239

ABSTRACT

Serum-soluble folate binding protein (FBP) is an important tumor marker, and the development of a simple biosensing method is highly needed. In this work, a photoelectrochemical (PEC) biosensor for the detection of FBP was proposed based on the construction of an antifouling interface and the unique ligand-protein recognition. The PEC sensing platform was prepared by the biomimetic polydopamine (PDA) coating on TiO2 nanotubes arrays (NTAs). A significant PEC enhancement effect was obtained due to the macroporous structures. Excellent antifouling performance was achieved by conjugation of amino-group-terminated 8-arm poly(ethylene glycol) (PEG). The incorporation of folic acid (FA) retains the antifouling property and shows recognition abilities toward FBP. The fabricated PEC biosensor shows good analytical performance. The combination of ligand-protein recognition and a PEC antifouling interface provides a good consideration for the development of FBP biosensors.


Subject(s)
Biomarkers, Tumor/isolation & purification , Biosensing Techniques , Neoplasms/blood , Biomarkers, Tumor/blood , Folic Acid/chemistry , Folic Acid/pharmacology , Fructose-Bisphosphatase/blood , Fructose-Bisphosphatase/isolation & purification , Humans , Indoles/chemistry , Nanotubes/chemistry , Neoplasms/pathology , Photochemical Processes , Polyethylene Glycols/chemistry , Polymers/chemistry , Titanium/chemistry
4.
Arch Biochem Biophys ; 669: 39-49, 2019 07 15.
Article in English | MEDLINE | ID: mdl-31128085

ABSTRACT

To enhance our understanding of the control of archaeal carbon central metabolism, a detailed analysis of the regulation mechanisms of both fructose1,6-bisphosphatase (FruBPase) and ADP-phosphofructokinase-1 (ADP-PFK1) was carried out in the methanogen Methanosarcina acetivorans. No correlations were found among the transcript levels of the MA_1152 and MA_3563 (frubpase type II and pfk1) genes, the FruBPase and ADP-PFK1 activities, and their protein contents. The kinetics of the recombinant FruBPase II and ADP-PFK1 were hyperbolic and showed simple mixed-type inhibition by AMP and ATP, respectively. Under physiological metabolite concentrations, the FruBPase II and ADP-PFK1 activities were strongly modulated by their inhibitors. To assess whether these enzymes were also regulated by a phosphorylation/dephosphorylation process, the recombinant enzymes and cytosolic-enriched fractions were incubated in the presence of commercial protein phosphatase or protein kinase. De-phosphorylation of ADP-PFK1 slightly decreased its activity (i.e. Vmax) and did not change its kinetic parameters and oligomeric state. Thus, the data indicated a predominant metabolic regulation of both FruBPase and ADP-PFK1 activities by adenine nucleotides and suggested high degrees of control on the respective pathway fluxes.


Subject(s)
Archaeal Proteins/metabolism , Fructose-Bisphosphatase/metabolism , Methanosarcina/metabolism , Phosphofructokinase-1/metabolism , Adenosine Diphosphate/metabolism , Adenosine Monophosphate/metabolism , Adenosine Triphosphate/metabolism , Animals , Archaeal Proteins/genetics , Archaeal Proteins/isolation & purification , Chickens , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Fructosephosphates/metabolism , Genes, Archaeal , Kinetics , Methanosarcina/genetics , Phosphofructokinase-1/genetics , Phosphofructokinase-1/isolation & purification , Phosphorylation , Protein Kinase Inhibitors/metabolism , Protein Processing, Post-Translational
5.
PLoS One ; 8(4): e61500, 2013.
Article in English | MEDLINE | ID: mdl-23585905

ABSTRACT

Cell-free biosystems comprised of synthetic enzymatic pathways would be a promising biomanufacturing platform due to several advantages, such as high product yield, fast reaction rate, easy control and access, and so on. However, it was essential to produce (purified) enzymes at low costs and stabilize them for a long time so to decrease biocatalyst costs. We studied the stability of the four recombinant enzyme mixtures, all of which originated from thermophilic microorganisms: triosephosphate isomerase (TIM) from Thermus thermophiles, fructose bisphosphate aldolase (ALD) from Thermotoga maritima, fructose bisphosphatase (FBP) from T. maritima, and phosphoglucose isomerase (PGI) from Clostridium thermocellum. It was found that TIM and ALD were very stable at evaluated temperature so that they were purified by heat precipitation followed by gradient ammonia sulfate precipitation. In contrast, PGI was not stable enough for heat treatment. In addition, the stability of a low concentration PGI was enhanced by more than 25 times in the presence of 20 mg/L bovine serum albumin or the other three enzymes. At a practical enzyme loading of 1000 U/L for each enzyme, the half-life time of free PGI was prolong to 433 h in the presence of the other three enzymes, resulting in a great increase in the total turn-over number of PGI to 6.2×10(9) mole of product per mole of enzyme. This study clearly suggested that the presence of other proteins had a strong synergetic effect on the stabilization of the thermolabile enzyme PGI due to in vitro macromolecular crowding effect. Also, this result could be used to explain why not all enzymes isolated from thermophilic microorganisms are stable in vitro because of a lack of the macromolecular crowding environment.


Subject(s)
Bacterial Proteins/isolation & purification , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphate Aldolase/isolation & purification , Glucose-6-Phosphate Isomerase/isolation & purification , Triose-Phosphate Isomerase/isolation & purification , Bacterial Proteins/chemistry , Biocatalysis , Clostridium thermocellum/chemistry , Clostridium thermocellum/enzymology , Enzyme Assays , Enzyme Stability , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphate Aldolase/chemistry , Glucose-6-Phosphate Isomerase/chemistry , Half-Life , Kinetics , Serum Albumin, Bovine/chemistry , Temperature , Thermotoga maritima/chemistry , Thermotoga maritima/enzymology , Thermus thermophilus/chemistry , Thermus thermophilus/enzymology , Triose-Phosphate Isomerase/chemistry
6.
Appl Biochem Biotechnol ; 164(8): 1376-89, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21451980

ABSTRACT

The glpX gene (Rv1099c) of Mycobacterium tuberculosis (Mtb) encodes Fructose 1,6-bisphosphatase II (FBPase II; EC 3.1.3.11); a key gluconeogenic enzyme. Mtb possesses glpX homologue as the major known FBPase. This study explored the expression, purification and enzymatic characterization of functionally active FBPase II from Mtb. The glpX gene was cloned, expressed and purified using a two step purification strategy including affinity and size exclusion chromatography. The specific activity of Mtb FBPase II is 1.3 U/mg. The enzyme is oligomeric, followed Michaelis-Menten kinetics with an apparent km = 44 µM. Enzyme activity is dependent on bivalent metal ions and is inhibited by lithium and inorganic phosphate. The pH optimum and thermostability of the enzyme have been determined. The robust expression, purification and assay protocols ensure sufficient production of this protein for structural biology and screening of inhibitors against this enzyme.


Subject(s)
Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphatase/metabolism , Mycobacterium tuberculosis/enzymology , Calcium/metabolism , Calcium/pharmacology , Cations/metabolism , Chromatography, Affinity , Chromatography, Gel , Cloning, Molecular , Enzyme Inhibitors/pharmacology , Enzyme Stability , Escherichia coli/genetics , Fructose-Bisphosphatase/antagonists & inhibitors , Gene Expression Regulation, Enzymologic , Hydrogen-Ion Concentration , Lithium , Magnesium/metabolism , Magnesium/pharmacology , Manganese/metabolism , Manganese/pharmacology , Metals/metabolism , Molecular Weight , Mycobacterium tuberculosis/genetics , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism
7.
Protein Expr Purif ; 74(2): 175-80, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20600937

ABSTRACT

Fructose-1,6-bisphosphatase is one of the key enzymes of the gluconeogenic pathway. It catalyses the hydrolysis of fructose-1,6-bisphosphate to fructose-6-phosphate and inorganic phosphate. Fructose-1,6-bisphosphatase from the extreme thermophilic bacterium Thermus thermophilus has been purified by crystallisation approach. The final well-shaped crystals have been obtained using vapour diffusion sitting-drops in the presence of PEG 400 as the precipitating agent. The initially obtained native twinned crystals diffracted up to 1.2Å resolution. Untwinned crystals used for data collection, however, were grown in the presence of thiomersal. They diffract to 1.8 Å resolution and belong to the space groups I422 with cell dimensions (i) a=b=108.8Å, c=336.3Å showing two molecules in the asymmetric unit, and (ii) a=b=113.7Å, c=151.0Å with one molecule in the asymmetric unit. The crystal structure has been solved by single anomalous dispersion using a 1.9Å resolution. For further biochemical and biophysical investigations recombinant fructose-1,6-bisphosphatase has been produced in Escherichia coli. Both native (dissolved crystals) and recombinant material have been characterised by SDS-PAGE, N-terminal sequencing and MALDI-MS.


Subject(s)
Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/isolation & purification , Thermus thermophilus/enzymology , Amino Acid Sequence , Crystallography, X-Ray , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/metabolism , Molecular Sequence Data , Recombinant Proteins/metabolism , Sequence Alignment , Thermus thermophilus/metabolism
8.
J Microbiol ; 48(6): 803-7, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21221938

ABSTRACT

To understand the physiological functions of thermostable fructose-1,6-bisphosphatase (TNA1-Fbp) from Thermococcus onnurineus NA1, its recombinant enzyme was overexpressed in Escherichia coli, purified, and the enzymatic properties were characterized. The enzyme showed maximal activity for fructose-1,6-bisphosphate at 95°C and pH 8.0 with a half-life (t (1/2)) of about 8 h. TNA1-Fbp had broad substrate specificities for fructose-1,6-bisphosphate and its analogues including fructose-1-phosphate, glucose-1-phosphate, and phosphoenolpyruvate. In addition, its enzyme activity was increased five-fold by addition of 1 mM Mg(2+), while Li(+) did not enhance enzymatic activity. TNA1-Fbp activity was inhibited by ATP, ADP, and phosphoenolpyruvate, but AMP up to 100 mM did not have any effect. TNA1-Fbp is currently defined as a class V fructose-1,6-bisphosphatase (FBPase) because it is very similar to FBPase of Thermococcus kodakaraensis KOD1 based on sequence homology. However, this enzyme shows a different range of substrate specificities. These results suggest that TNA1-Fbp can establish new criterion for class V FBPases.


Subject(s)
Fructose-Bisphosphatase/metabolism , Thermococcus/enzymology , Adenosine Diphosphate/metabolism , Adenosine Triphosphate/metabolism , Cloning, Molecular , Enzyme Activators/metabolism , Enzyme Inhibitors/metabolism , Escherichia coli/genetics , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Fructosephosphates/metabolism , Gene Expression , Glucosephosphates/metabolism , Half-Life , Hot Temperature , Hydrogen-Ion Concentration , Magnesium/metabolism , Phosphoenolpyruvate/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Substrate Specificity
9.
Anal Bioanal Chem ; 394(8): 2137-44, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19609512

ABSTRACT

A mid-infrared enzymatic assay for label-free monitoring of the enzymatic reaction of fructose-1,6-bisphosphatase with fructose 1,6-bisphosphate has been proposed. The whole procedure was done in an automated way operating in the stopped flow mode by incorporating a temperature-controlled flow cell in a sequential injection manifold. Fourier transform infrared difference spectra were evaluated for kinetic parameters, like the Michaelis-Menten constant (K(M)) of the enzyme and Vmax of the reaction. The obtained K(M) of the reaction was 14 +/- 3 g L(-1) (41 microM). Furthermore, inhibition by adenosine 5'-monophosphate (AMP) was evaluated, and the K(M)(App) value was determined to be 12 +/- 2 g L(-1) (35 microM) for 7.5 and 15 microM AMP, respectively, with Vmax decreasing from 0.1 +/- 0.03 to 0.05 +/- 0.01 g L(-1) min(-1). Therefore, AMP exerted a non-competitive inhibition.


Subject(s)
Adenosine Monophosphate/metabolism , Flow Injection Analysis/instrumentation , Fructose-Bisphosphatase/antagonists & inhibitors , Fructose-Bisphosphatase/metabolism , Spectroscopy, Fourier Transform Infrared/methods , Equipment Design , Fructose-Bisphosphatase/isolation & purification , Fructosediphosphates/metabolism , Humans , Kinetics , Liver/enzymology , Spectroscopy, Fourier Transform Infrared/instrumentation
10.
Mikrobiol Z ; 69(3): 68-73, 2007.
Article in Ukrainian | MEDLINE | ID: mdl-17682534

ABSTRACT

It was shown for the first time that extracellular FBPase of B. subtilis 668 like the preparation obtained from culture liquid of B. subtilis B 7025 displays citotoxicity activity in respect of tumor cells of sarcoma 37 in vitro. It is shown that the preparations remove TA antigens from the surface of the tumor cell. It is supposed that the mechanisms of citotoxic effect of extracellular FBFase of B. subtilis 668 and preparation from the culture liquid of B. subtilis B 7025 in vitro on cells of sarcoma 37 is probably realized through the apoptosis.


Subject(s)
Antineoplastic Agents/pharmacology , Apoptosis/drug effects , Bacillus subtilis/enzymology , Culture Media/chemistry , Extracellular Fluid/enzymology , Fructose-Bisphosphatase/pharmacology , Animals , Antineoplastic Agents/isolation & purification , Cell Line, Tumor , Fructose-Bisphosphatase/isolation & purification , Sarcoma 37/pathology
11.
Cell ; 126(1): 107-20, 2006 Jul 14.
Article in English | MEDLINE | ID: mdl-16839880

ABSTRACT

The p53 tumor-suppressor protein prevents cancer development through various mechanisms, including the induction of cell-cycle arrest, apoptosis, and the maintenance of genome stability. We have identified a p53-inducible gene named TIGAR (TP53-induced glycolysis and apoptosis regulator). TIGAR expression lowered fructose-2,6-bisphosphate levels in cells, resulting in an inhibition of glycolysis and an overall decrease in intracellular reactive oxygen species (ROS) levels. These functions of TIGAR correlated with an ability to protect cells from ROS-associated apoptosis, and consequently, knockdown of endogenous TIGAR expression sensitized cells to p53-induced death. Expression of TIGAR may therefore modulate the apoptotic response to p53, allowing survival in the face of mild or transient stress signals that may be reversed or repaired. The decrease of intracellular ROS levels in response to TIGAR may also play a role in the ability of p53 to protect from the accumulation of genomic damage.


Subject(s)
Apoptosis/genetics , Cell Transformation, Neoplastic/metabolism , Glycolysis/genetics , Oxidative Stress/genetics , Phosphoric Monoester Hydrolases/metabolism , Proteins/metabolism , Tumor Suppressor Protein p53/metabolism , Amino Acid Sequence , Apoptosis Regulatory Proteins , Base Sequence , Cell Line, Tumor , Cell Survival/genetics , Cell Transformation, Neoplastic/genetics , Chromosomes, Human, Pair 12/genetics , DNA Damage/physiology , DNA Repair/physiology , Down-Regulation/physiology , Energy Metabolism/genetics , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphatase/metabolism , Fructosediphosphates/metabolism , Gene Expression Regulation/physiology , Genomic Instability/physiology , Humans , Intracellular Signaling Peptides and Proteins , Molecular Sequence Data , Phosphoric Monoester Hydrolases/genetics , Phosphoric Monoester Hydrolases/isolation & purification , Proteins/genetics , Proteins/isolation & purification , Reactive Oxygen Species/metabolism , Signal Transduction/physiology , Tumor Suppressor Protein p53/genetics
12.
Biochemistry ; 43(47): 14948-57, 2004 Nov 30.
Article in English | MEDLINE | ID: mdl-15554702

ABSTRACT

Fructose 1,6-bisphosphatase (FBPase) is known to form a supramolecular complex with alpha-actinin and aldolase on both sides of the Z-line in skeletal muscle cells. It has been proposed that association of aldolase with FBPase not only desensitizes muscle FBPase toward AMP inhibition but it also might enable the channeling of intermediates between the enzymes [Rakus et al. (2003) FEBS Lett. 547, 11-14]. In the present paper, we tested the possibility of fructose 1,6-bisphosphate (F1,6-P(2)) channeling between aldolase and FBPase using the approach in which an inactive form of FBPase competed with active FBPase for binding to aldolase and thus decreased the rate of aldolase-FBPase reaction. The results showed that F1,6-P(2) is transferred directly from aldolase to FBPase without mixing with the bulk phase. Further evidence that F1,6-P(2) is channeled from aldolase to FBPase comes from the experiments investigating the inhibitory effect of a high concentration of magnesium ions on aldolase-FBPase activity. FBPase in a complex with aldolase, contrary to free muscle FBPase, was not inhibited by high Mg(2+) concentrations, which suggests that free F1,6-P(2) was not present in the assay mixture during the reaction. A real-time interaction analysis between aldolase and FBPase revealed a dual role of Mg(2+) in the regulation of the aldolase-FBPase complex stability. A physiological concentration of Mg(2+) increased the affinity of muscle FBPase to muscle aldolase, whereas higher concentrations of the cation decreased the concentration of the complex. We hypothesized that the presence of Mg(2+) stabilizes a positively charged cavity within FBPase and that it might enable an interaction with aldolase. Because magnesium decreased the binding constant (K(a)) between aldolase and FBPase in a manner similar to the decrease of K(a) caused by monovalent cations, it is postulated that electrostatic attraction might be a driving force for the complex formation. It is presumed that the biological relevance of F1,6-P(2) channeling between aldolase and FBPase is protection of this glyconeogenic, as well as glycolytic, intermediate against degradation by cytosolic aldolase, which is one of the most abundant enzyme of glycolysis.


Subject(s)
Fructose-Bisphosphatase/metabolism , Fructose-Bisphosphate Aldolase/metabolism , Muscle, Skeletal/chemistry , Muscle, Skeletal/enzymology , Substrate Specificity , Actinin/metabolism , Adenosine Monophosphate/pharmacology , Animals , Cations, Monovalent/pharmacology , Computer Simulation , Dose-Response Relationship, Drug , Enzyme Inhibitors/pharmacology , Fructose-Bisphosphatase/antagonists & inhibitors , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphate Aldolase/antagonists & inhibitors , Fructose-Bisphosphate Aldolase/isolation & purification , Kinetics , Magnesium/metabolism , Magnesium/pharmacology , Models, Molecular , Polyethylene Glycols , Protein Binding , Protein Denaturation , Pyridoxal Phosphate/analogs & derivatives , Pyridoxal Phosphate/pharmacology , Rabbits , Spectrometry, Fluorescence , Static Electricity , Surface Plasmon Resonance , Temperature , o-Phthalaldehyde/pharmacology
13.
Mikrobiol Z ; 66(3): 89-97, 2004.
Article in Ukrainian | MEDLINE | ID: mdl-15456223

ABSTRACT

A preparation with fructose-1,6-bisphosphatase (FBPase) activity has been isolated as a result of the five-stage treatment of the culture liquid obtained after growing the agent of pale-green dwarfness of cereals on the medium CM IMB-72. After this enzyme treatment by means of hydrophobic chromatography on the column from Toyopearl HW-60 (the enzyme was obtained from the column with decrease of ammonium sulphate (AS) concentration in the eluating buffer to 0.8 M), the preparation deprivation of AS on the column with Sephadex G-10 and substrate-dependent chromatography on the column with CM-sepharose the extracellular 176-fold purified FBPase. Acholeplasma laidlawii var. granulum strain 118 was obtained--the main pathogenicity factor for the agent of cereals yellow.


Subject(s)
Edible Grain , Fructose-Bisphosphatase/isolation & purification , Phytoplasma/pathogenicity , Plant Diseases , Chromatography , Culture Media , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/genetics , Hydrophobic and Hydrophilic Interactions
14.
Comp Biochem Physiol B Biochem Mol Biol ; 137(1): 115-29, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14698918

ABSTRACT

Fructose-1,6-bisphosphatase (FBPase; EC 3.1.3.11) is strongly inhibited by AMP in vitro and, therefore, at physiological concentrations of substrate and AMP, FBPase should be completely inhibited. Desensitization of rabbit muscle FBPase against AMP inhibition was previously observed in the presence of rabbit muscle aldolase. In this study, we analysed the kinetics of an FBPase catalyzed reaction and interaction between chicken muscle FBPase and chicken muscle aldolase. The initial rate of FBPase reaction vs. substrate concentration shows a maximum activity at a concentration of 20 microM Fru-1,6P2 and then decreases. Assuming rapid equilibrium kinetics, the enzyme-catalyzed reaction was described by the substrate inhibition model, with Ks approximately 5 microM and Ksi approximately 39 microM and factor beta approximately 0.2, describing change in the rate constant (k) of product formation from the ES and ESSi complexes. Based on ultracentrifugation studies, aldolase and FBPase form a hetero-complex with approximately 1:1 stoichiometry with a dissociation constant (Kd) of 3.8 microM. The FBPase-aldolase interaction was confirmed via fluorescence investigation. The aldolase-FBPase interaction results in aldolase fluorescence quenching and its maximum emission spectrum shifting from 344 to 356 nm. The Kd of the FBPase-aldolase complex, determined on the basis of fluorescence changes, is 0.4 microM at 25 degrees C with almost 1:1 stoichiometry. This interaction increases the I(0.5) for the AMP inhibition of FBPase threefold, and slightly affects FBPase affinity to magnesium ions, increasing the Ka and Hill coefficient (n). No effect of aldolase on the FBPase pH optimum was observed. Thus, the decrease in FBPase sensitivity to AMP inhibition enables FBPase to function in vivo thanks to aldolase.


Subject(s)
Fructose-Bisphosphatase/metabolism , Fructose-Bisphosphate Aldolase/metabolism , Muscle, Skeletal/enzymology , Adenosine Monophosphate/metabolism , Animals , Chickens , Fructose-Bisphosphatase/antagonists & inhibitors , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphate Aldolase/antagonists & inhibitors , Fructose-Bisphosphate Aldolase/isolation & purification , Kinetics , Protein Binding , Spectrometry, Fluorescence , Substrate Specificity
15.
FEBS Lett ; 547(1-3): 11-4, 2003 Jul 17.
Article in English | MEDLINE | ID: mdl-12860378

ABSTRACT

Real-time interaction analysis, using the BIAcore biosensor, of rabbit muscle FBPase-aldolase complex revealed apparent binding constant [K(Aapp)] values of about 4.4x10(8) M(-1). The stability of the complex was down-regulated by the glycolytic intermediates dihydroxyacetone phosphate and fructose 6-phosphate, and by the regulator of glycolysis and glyconeogenesis--fructose 2,6-bisphosphate. FBPase in a complex with aldolase was entirely insensitive to inhibition by physiological concentrations of AMP (I(0.5) was 1.35 mM) and the cooperativity of the inhibition was not observed. The existence of an FBPase-aldolase complex that is insensitive to AMP inhibition explains the possibility of glycogen synthesis from carbohydrate precursors in vertebrates' myocytes.


Subject(s)
Adenosine Monophosphate/pharmacology , Fructose-Bisphosphatase/antagonists & inhibitors , Fructose-Bisphosphate Aldolase/antagonists & inhibitors , Muscle, Skeletal/enzymology , Animals , Dihydroxyacetone Phosphate/pharmacology , Enzyme Inhibitors/pharmacology , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphatase/metabolism , Fructose-Bisphosphate Aldolase/isolation & purification , Fructose-Bisphosphate Aldolase/metabolism , Gluconeogenesis , Glycolysis , Kinetics , Rabbits
16.
Acta Biochim Pol ; 50(1): 115-21, 2003.
Article in English | MEDLINE | ID: mdl-12673351

ABSTRACT

Phosphorylated fructose-1,6-bisphosphatase (FBPase) was isolated from rabbit muscle in an SDS/PAGE homogeneous form. Its dephosphorylation with alkaline phosphatase revealed 2.8 moles of inorganic phosphate per mole of FBPase. The phosphorylated FBPase (P-FBPase) differs from the dephosphorylated enzyme in terms of its kinetic properties like K(m) and k(cat), which are two times higher for the phosphorylated FBPase, and in the affinity for aldolase, which is three times lower for the dephosphorylated enzyme. Dephosphorylated FBPase can be a substrate for protein kinase A and the amount of phosphate incorporated per FBPase monomer can reach 2-3 molecules. Since interaction of muscle aldolase with muscle FBPase results in desensitisation of the latter toward AMP inhibition (Rakus & Dzugaj, 2000, Biochem. Biophys. Res. Commun. 275, 611-616), phosphorylation may be considered as a way of muscle FBPase activity regulation.


Subject(s)
Fructose-Bisphosphatase/metabolism , Muscle, Skeletal/enzymology , Animals , Cyclic AMP-Dependent Protein Kinases/metabolism , Electrophoresis, Polyacrylamide Gel , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/isolation & purification , Kinetics , Models, Molecular , Phosphates/metabolism , Phosphorylation , Protein Conformation , Rabbits , Substrate Specificity
17.
Protein Expr Purif ; 28(1): 42-8, 2003 Mar.
Article in English | MEDLINE | ID: mdl-12651105

ABSTRACT

Full-length cDNA encoding pea cytoplasmic fructose-1,6-bisphosphatase (cyFBPase) was cloned from a pea cDNA library. The cloned cDNA was introduced into the Escherichia coli expression vector pET-15b. The recombinant cyFBPase was expressed in E. coli BL21 (DE3) cells in a soluble form and purified to homogeneity by Ni(+)-NTA affinity chromatography. The identity of the recombinant cyFBPase was confirmed by SDS-PAGE and immunoblot analysis using a polyclonal anti-His tag antibody. The recombinant cyFBPase was active at neutral pH ranges (6.6-9.0) and thermostable as other cyFBPases. The activation energy (E(a)) and Arrhenius frequency factor were 17.4 kcal/mol and 2.6 x 10(12)/s, respectively. The K(M) and V(max) values of the recombinant enzyme were calculated as 10.47 microM and 109 micromol/min, respectively. In case of removal of histidine tag, the K(M) value was calculated as 5.03 microM. The recombinant enzyme was non-competitively and competitively inhibited by AMP and fructose-2,6-bisphosphate, respectively.


Subject(s)
Cytoplasm/enzymology , Fructose-Bisphosphatase/chemistry , Fructose-Bisphosphatase/isolation & purification , Pisum sativum/enzymology , Amino Acid Sequence , Cloning, Molecular , Enzyme Stability , Escherichia coli , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/metabolism , Gene Expression , Hydrogen-Ion Concentration , Kinetics , Molecular Sequence Data , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Temperature
18.
J Bacteriol ; 184(12): 3401-5, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12029059

ABSTRACT

The Pyrococcus furiosus fbpA gene was cloned and expressed in Escherichia coli, and the fructose-1,6-bisphosphatase produced was subsequently purified and characterized. The dimeric enzyme showed a preference for fructose-1,6-bisphosphate, with a K(m) of 0.32 mM and a V(max) of 12.2 U/mg. The P. furiosus fructose-1,6-bisphosphatase was strongly inhibited by Li(+) (50% inhibitory concentration, 1 mM). Based on the presence of conserved sequence motifs and the substrate specificity of the P. furiosus fructose-1,6-bisphosphatase, we propose that this enzyme belongs to a new family, class IV fructose-1,6-bisphosphatase.


Subject(s)
Archaeal Proteins/genetics , Archaeal Proteins/metabolism , Fructose-Bisphosphatase , Pyrococcus furiosus/enzymology , Amino Acid Sequence , Cloning, Molecular , Fructose-Bisphosphatase/classification , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Fructose-Bisphosphatase/metabolism , Molecular Sequence Data , Pyrococcus furiosus/genetics , Sequence Analysis, DNA , Substrate Specificity , Temperature
19.
Biochim Biophys Acta ; 1594(1): 6-16, 2002 Jan 31.
Article in English | MEDLINE | ID: mdl-11825604

ABSTRACT

Previous kinetic characterization of Escherichia coli fructose 1,6-bisphosphatase (FBPase) was performed on enzyme with an estimated purity of only 50%. Contradictory kinetic properties of the partially purified E. coli FBPase have been reported in regard to AMP cooperativity and inactivation by fructose-2,6-bisphosphate. In this investigation, a new purification for E. coli FBPase has been devised yielding enzyme with purity levels as high as 98%. This highly purified E. coli FBPase was characterized and the data compared to that for the pig kidney enzyme. Also, a homology model was created based upon the known three-dimensional structure of the pig kidney enzyme. The kcat of the E. coli FBPase was 14.6 s(-1) as compared to 21 s(-1) for the pig kidney enzyme, while the K(m) of the E. coli enzyme was approximately 10-fold higher than that of the pig kidney enzyme. The concentration of Mg2+ required to bring E. coli FBPase to half maximal activity was estimated to be 0.62 mM Mg2+, which is twice that required for the pig kidney enzyme. Unlike the pig kidney enzyme, the Mg2+ activation of the E. coli FBPase is not cooperative. AMP inhibition of mammalian FBPases is cooperative with a Hill coefficient of 2; however, the E. coli FBPase displays no cooperativity. Although cooperativity is not observed, the E. coli and pig kidney enzymes show similar AMP affinity. The quaternary structure of the E. coli enzyme is tetrameric, although higher molecular mass aggregates were also observed. The homology model of the E. coli enzyme indicated slight variations in the ligand-binding pockets compared to the pig kidney enzyme. The homology model of the E. coli enzyme also identified significant changes in the interfaces between the subunits, indicating possible changes in the path of communication of the allosteric signal.


Subject(s)
Escherichia coli/enzymology , Fructose-Bisphosphatase/chemistry , Allosteric Regulation , Amino Acid Sequence , Cations, Divalent , Enzyme Inhibitors/pharmacology , Escherichia coli/genetics , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/isolation & purification , Kinetics , Magnesium/chemistry , Models, Molecular , Molecular Sequence Data , Recombinant Proteins/chemistry , Sequence Alignment , Signal Transduction
20.
Insect Biochem Mol Biol ; 31(4-5): 381-92, 2001 Mar 15.
Article in English | MEDLINE | ID: mdl-11222947

ABSTRACT

Hypertrehalosemic neuropeptides from the corpora cardiaca such as the decapeptide Bld HrTH bring about a profound switch in the metabolic activity of cockroach fat body during which production of the blood sugar trehalose is stimulated while the catabolism of carbohydrate (glycolysis) is inhibited. The mechanisms of the metabolic switch are not fully understood. Incubation of isolated fat body from the cockroach Blaptica dubia with 10(-8) M Bld HrTH, for 10-60 min, stimulated glycogen breakdown and increased the content of the substrates of both the glycolytic enzyme 6-phosphofructo-1-kinase (PFK, EC 2.7.1.11) and the gluconeogenic enzyme fructose-1,6-bisphosphatase (FBPase, EC 3.1.3.11) in the tissue. The glycolytic signal fructose 2,6-bisphosphate was markedly decreased in fat body on incubation with Bld HrTH. The content of ATP was slightly reduced, while the contents of ADP and AMP were increased after incubation with the hormone. Fructose 2,6-bisphosphate is a potent activator of PFK and a strong inhibitor of FBPase purified from fat body. The activity of PFK was decreased by about 90% when the hormone-dependent changes in effectors and substrates in fat body were simulated in vitro. FBPase, in contrast, was activated about 25-fold under these conditions, suggesting the hormone to stimulate gluconeogenesis in fat body. The data support the view that fructose 2,6-bisphosphate is a pivotal intracellular messenger in the hormone-induced metabolic switch from carbohydrate degradation to trehalose production in cockroach fat body.


Subject(s)
Cockroaches/metabolism , Fat Body/metabolism , Fructose-Bisphosphatase/antagonists & inhibitors , Neuropeptides/pharmacology , Phosphofructokinase-1/antagonists & inhibitors , Adenosine Monophosphate/pharmacology , Animals , Fructose-Bisphosphatase/isolation & purification , Fructosediphosphates/pharmacology , Gene Expression Regulation, Enzymologic , Glycogen/metabolism , In Vitro Techniques , Insect Hormones/pharmacology , Kinetics , Male , Phosphofructokinase-1/isolation & purification , Trehalose/metabolism
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