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1.
Microb Cell Fact ; 23(1): 150, 2024 May 24.
Article in English | MEDLINE | ID: mdl-38790055

ABSTRACT

BACKGROUND: Azo dyes represent a common textile dye preferred for its high stability on fabrics in various harsh conditions. Although these dyes pose high-risk levels for all biological forms, fungal laccase is known as a green catalyst for its ability to oxidize numerous dyes. METHODS: Trichoderma isolates were identified and tested for laccase production. Laccase production was optimized using Plackett-Burman Design. Laccase molecular weight and the kinetic properties of the enzyme, including Km and Vmax, pH, temperature, and ionic strength, were detected. Azo dye removal efficiency by laccase enzyme was detected for Congo red, methylene blue, and methyl orange. RESULTS: Eight out of nine Trichoderma isolates were laccase producers. Laccase production efficiency was optimized by the superior strain T. harzianum PP389612, increasing production from 1.6 to 2.89 U/ml. In SDS-PAGE, purified laccases appear as a single protein band with a molecular weight of 41.00 kDa. Km and Vmax values were 146.12 µmol guaiacol and 3.82 µmol guaiacol/min. Its activity was stable in the pH range of 5-7, with an optimum temperature range of 40 to 50 °C, optimum ionic strength of 50 mM NaCl, and thermostability properties up to 90 °C. The decolorization efficiency of laccase was increased by increasing the time and reached its maximum after 72 h. The highest efficiency was achieved in Congo red decolorization, which reached 99% after 72 h, followed by methylene blue at 72%, while methyl orange decolorization efficiency was 68.5%. CONCLUSION: Trichoderma laccase can be used as an effective natural bio-agent for dye removal because it is stable and removes colors very well.


Subject(s)
Azo Compounds , Coloring Agents , Laccase , Temperature , Laccase/metabolism , Laccase/chemistry , Laccase/isolation & purification , Azo Compounds/metabolism , Coloring Agents/metabolism , Coloring Agents/chemistry , Kinetics , Hydrogen-Ion Concentration , Congo Red/metabolism , Osmolar Concentration , Hypocreales/enzymology , Hypocreales/metabolism , Biodegradation, Environmental , Fungal Proteins/metabolism , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification
2.
Int J Med Mushrooms ; 26(6): 53-68, 2024.
Article in English | MEDLINE | ID: mdl-38801087

ABSTRACT

The purification of a fibrinolytic enzyme from the fruiting bodies of wild-growing medicinal mushroom, Pycnoporus coccineus was achieved through a two-step procedure, resulting in its homogeneity. This purification process yielded a significant 4.13-fold increase in specific activity and an 8.0% recovery rate. The molecular weight of P. coccineus fibrinolytic enzyme (PCFE) was estimated to be 23 kDa using sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis. PCFE demonstrated its optimal activity at a temperature of 40 °C and pH 8. Notably, the enzymatic activity was inhibited by the presence of zinc or copper metal ions, as well as serine protease inhibitors, such as phenylmethylsulfonyl fluoride and 4-amidinophenylmethanesulfonyl fluoride. PCFE exhibited remarkable specificity towards a synthetic chromogenic substrate for thrombin. The enzyme demonstrated the Michaelis-Menten constant (Km), maximal velocity (V ), and catalytic rate constant (Kcat) values of 3.01 mM, 0.33 mM min-1 µg-1, and 764.1 s-1, respectively. In vitro assays showed PCFE's ability to effectively degrade fibrin and blood clots. The enzyme induced alterations in the density and structural characteristics of fibrin clots. PCFE exhibited significant effects on various clotting parameters, including recalcification time, activated partial thromboplastin time, prothrombin time, serotonin secretion from thrombin-activated platelets, and thrombin-induced acute thromboembolism. These findings suggest that P. coccineus holds potential as an antithrombotic biomaterials and resources for cardiovascular research.


Subject(s)
Fibrinolytic Agents , Pycnoporus , Serine Proteases , Fibrinolytic Agents/pharmacology , Fibrinolytic Agents/isolation & purification , Fibrinolytic Agents/chemistry , Serine Proteases/isolation & purification , Serine Proteases/pharmacology , Serine Proteases/metabolism , Serine Proteases/chemistry , Animals , Pycnoporus/enzymology , Molecular Weight , Fruiting Bodies, Fungal/chemistry , Hydrogen-Ion Concentration , Temperature , Humans , Fibrin/metabolism , Fungal Proteins/isolation & purification , Fungal Proteins/chemistry , Fungal Proteins/pharmacology
3.
Enzyme Microb Technol ; 178: 110441, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38574421

ABSTRACT

Millions of tons of citrus peel waste are produced every year as a byproduct of the juice industry. Citrus peel is rich in pectin and xyloglucan, but while the pectin is extracted for use in the food industry, the xyloglucan is currently not valorized. To target hydrolytic degradation of citrus peel xyloglucan into oligosaccharides, we have used bioinformatics to identify three glycoside hydrolase 12 (GH12) endoxyloglucanases (EC 3.2.1.151) from the citrus fruit pathogens Penicillium italicum GL-Gan1 and Penicillium digitatum Pd1 and characterized them on xyloglucan obtained by alkaline extraction from citrus peel. The enzymes displayed pH-temperature optima of pH 4.6-5.3 and 35-37°C. PdGH12 from P. digitatum and PiGH12A from P. italicum share 84% sequence identity and displayed similar kinetics, although kcat was highest for PdGH12. In contrast, PiGH12B from P. italicum, which has the otherwise conserved Trp in subsite -4 replaced with a Tyr, displayed a 3 times higher KM and a 4 times lower kcat/KM than PiGH12A, but was the most thermostable enzyme of the three Penicillium-derived endoxyloglucanases. The benchmark enzyme AnGH12 from Aspergillus nidulans was more thermally stable and had a higher pH-temperature optimum than the enzymes from Penicillum spp. The difference in structure of the xyloglucan oligosaccharides extracted from citrus peel xyloglucan and tamarind xyloglucan by the new endoxyloglucanases was determined by LC-MS. The inclusion of citrus peel xyloglucan demonstrated that the endoxyloglucanases liberated fucosylated xyloglucan oligomers, implying that these enzymes have the potential to upgrade citrus peel residues to produce oligomers useful as intermediates or bioactive compounds.


Subject(s)
Citrus , Computational Biology , Fungal Proteins , Glucans , Glycoside Hydrolases , Penicillium , Xylans , Penicillium/enzymology , Penicillium/genetics , Citrus/microbiology , Glycoside Hydrolases/metabolism , Glycoside Hydrolases/genetics , Glycoside Hydrolases/chemistry , Glycoside Hydrolases/isolation & purification , Fungal Proteins/genetics , Fungal Proteins/metabolism , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification , Xylans/metabolism , Glucans/metabolism , Hydrogen-Ion Concentration , Kinetics , Substrate Specificity , Amino Acid Sequence , Enzyme Stability , Temperature , Hydrolysis
4.
Biochimie ; 220: 167-178, 2024 May.
Article in English | MEDLINE | ID: mdl-38158037

ABSTRACT

Candida albicans and C. glabrata express exporters of the ATP-binding cassette (ABC) superfamily and address them to their plasma membrane to expel azole antifungals, which cancels out their action and allows the yeast to become multidrug resistant (MDR). In a way to understand this mechanism of defense, we describe the purification and characterization of Cdr1, the membrane ABC exporter mainly responsible for such phenotype in both species. Cdr1 proteins were functionally expressed in the baker yeast, tagged at their C-terminal end with either a His-tag for the glabrata version, cgCdr1-His, or a green fluorescent protein (GFP) preceded by a proteolytic cleavage site for the albicans version, caCdr1-P-GFP. A membrane Cdr1-enriched fraction was then prepared to assay several detergents and stabilizers, probing their level of extraction and the ATPase activity of the proteins as a functional marker. Immobilized metal-affinity and size-exclusion chromatographies (IMAC, SEC) were then carried out to isolate homogenous samples. Overall, our data show that although topologically and phylogenetically close, both proteins display quite distinct behaviors during the extraction and purification steps, and qualify cgCdr1 as a good candidate to characterize this type of proteins for developing future inhibitors of their azole antifungal efflux activity.


Subject(s)
Antifungal Agents , Azoles , Candida albicans , Drug Resistance, Fungal , Fungal Proteins , Membrane Transport Proteins , Azoles/pharmacology , Azoles/chemistry , Azoles/metabolism , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/metabolism , Fungal Proteins/isolation & purification , Antifungal Agents/pharmacology , Antifungal Agents/chemistry , Antifungal Agents/isolation & purification , Candida albicans/drug effects , Membrane Transport Proteins/metabolism , Membrane Transport Proteins/chemistry , Membrane Transport Proteins/genetics , Candida glabrata/drug effects , Candida glabrata/genetics , Candida glabrata/metabolism , ATP-Binding Cassette Transporters/metabolism , ATP-Binding Cassette Transporters/genetics , ATP-Binding Cassette Transporters/chemistry
5.
Sci Rep ; 12(1): 2416, 2022 02 14.
Article in English | MEDLINE | ID: mdl-35165332

ABSTRACT

The aim of this work to study an efficient laccase producing fungus Ganoderma leucocontextum, which was identified by ITS regions of DNA and phylogenetic tree was constructed. This study showed the laccase first-time from G. leucocontextum by using medium containing guaiacol. The growth cultural (pH, temperature, incubation days, rpm) and nutritional (carbon and nitrogen sources) conditions were optimized, which enhanced the enzyme production up to 4.5-folds. Laccase production increased 855 U/L at 40 °C. The pH 5.0 was suitable for laccase secretion (2517 U/L) on the 7th day of incubation at 100 rpm (698.3 U/L). Glucose and sucrose were good carbon source to enhance the laccase synthesis. The 10 g/L beef (4671 U/L) and yeast extract (5776 U/L) were the best nitrogen source for laccase secretion from G. leucocontextum. The laccase was purified from the 80% ammonium sulphate precipitations of protein identified by nucleotides sequence. The molecular weight (65.0 kDa) of purified laccase was identified through SDS and native PAGE entitled as Glacc110. The Glacc110 was characterized under different parameters. It retained > 90% of its activity for 16 min incubation at 60 °C in acidic medium (pH 4.0). This enzyme exerted its optimal activity at pH 3.0 and temperature 70 °C with guaiacol substrate. The catalytic parameters Km and Vmax was 1.658 (mM) and 2.452 (mM/min), respectively. The thermo stability of the laccase produced by submerged fermentation of G. leucocontextum has potential for industrial and biotechnology applications. The results remarked the G. leucocontextum is a good source for laccase production.


Subject(s)
Fungal Proteins/chemistry , Fungal Proteins/metabolism , Ganoderma/enzymology , Laccase/chemistry , Laccase/metabolism , Phylogeny , Base Sequence , Chemical Precipitation , Enzyme Stability , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Ganoderma/chemistry , Ganoderma/classification , Ganoderma/genetics , Hot Temperature , Hydrogen-Ion Concentration , Kinetics , Laccase/genetics , Laccase/isolation & purification
6.
Protein Expr Purif ; 192: 106044, 2022 04.
Article in English | MEDLINE | ID: mdl-34998976

ABSTRACT

This work reports the immobilization of a fibrinolytic protease (FP) from Mucor subtilissimus UCP 1262 on Fe3O4 magnetic nanoparticles (MNPs) produced by precipitation of FeCl3·6H2O and FeCl2·4H2O, coated with polyaniline and activated with glutaraldehyde. The FP was obtained by solid state fermentation, precipitated with 40-60% ammonium sulfate, and purified by DEAE-Sephadex A50 ion exchange chromatography. The FP immobilization procedure allowed for an enzyme retention of 52.13%. The fibrinolytic protease immobilized on magnetic nanoparticles (MNPs/FP) maintained more than 60% of activity at a temperature of 40 to 60 °C and at pH 7 to 10, when compared to the non-immobilized enzyme. MNPs and MNPs/FP did not show any cytotoxicity against HEK-293 and J774A.1 cells. MNPs/FP was not hemolytic and reduced the hemolysis induced by MNPs from 2.07% to 1.37%. Thrombus degradation by MNPs/FP demonstrated that the immobilization process guaranteed the thrombolytic activity of the enzyme. MNPs/FP showed a total degradation of the γ chain of human fibrinogen within 90 min. These results suggest that MNPs/FP may be used as an alternative strategy to treat cardiovascular diseases with a targeted release through an external magnetic field.


Subject(s)
Fibrinolytic Agents/chemistry , Magnetite Nanoparticles/chemistry , Mucor/enzymology , Peptide Hydrolases/chemistry , Peptide Hydrolases/isolation & purification , Chromatography, Ion Exchange , Enzyme Stability , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Enzymes, Immobilized/pharmacology , Fibrinogen/chemistry , Fibrinogen/metabolism , Fibrinolytic Agents/isolation & purification , Fibrinolytic Agents/pharmacology , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Fungal Proteins/metabolism , Humans , Hydrogen-Ion Concentration , Mucor/chemistry , Mucor/genetics , Peptide Hydrolases/pharmacology , Temperature
7.
Mol Biotechnol ; 64(2): 187-198, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34580814

ABSTRACT

Xylanases (EC 3.2.1.8) have been considered as a potential green solution for the sustainable development of a wide range of industries including pulp and paper, food and beverages, animal feed, pharmaceuticals, and biofuels because they are the key enzymes that degrade the xylosidic linkages of xylan, the major component of the second most abundant raw material worldwide. Therefore, there is a critical need for the industrialized xylanases which must have high specific activity, be tolerant to organic solvent or detergent and be active during a wide range of conditions, such as high temperature and pH. In this study, an extracellular xylanase was purified from the culture broth of Aspergillus niger VTCC 017 for primary structure determination and properties characterization. The successive steps of purification comprised centrifugation, Sephadex G-100 filtration, and DEAE-Sephadex chromatography. The purified xylanase (specific activity reached 6596.79 UI/mg protein) was a monomer with a molecular weight of 37 kDa estimating from SDS electrophoresis. The results of LC/MS suggested that the purified protein is indeed an endo-1,4-ß-D-xylanase. The purified xylanase showed the optimal temperature of 55 °C, and pH 6.5 with a stable xylanolytic activity within the temperature range of 45-50 °C, and within the pH range of 5.0-8.0. Most divalent metal cations including Zn2+, Fe2+, Mg2+, Cu2+, Mn2+ showed some inhibition of xylanase activity while the monovalent metal cations such as K+ and Ag+ exhibited slight stimulating effects on the enzyme activity. The introduction of 10-30% different organic solvents (n-butanol, acetone, isopropanol) and several detergents (Triton X-100, Tween 20, and SDS) slightly reduced the enzyme activity. Moreover, the purified xylanase seemed to be tolerant to methanol and ethanol and was even stimulated by Tween 80. Overall, with these distinctive properties, the putative xylanase could be a successful candidate for numerous industrial uses.


Subject(s)
Aspergillus niger/enzymology , Fungal Proteins/isolation & purification , Xylosidases/isolation & purification , Xylosidases/metabolism , Detergents/chemistry , Dextrans , Electrophoresis, Polyacrylamide Gel , Enzyme Stability , Filtration/methods , Fungal Proteins/chemistry , Fungal Proteins/metabolism , Hydrogen-Ion Concentration , Kinetics , Metals/chemistry , Solvents/chemistry , Temperature , Xylosidases/chemistry
8.
Prep Biochem Biotechnol ; 52(1): 30-37, 2022.
Article in English | MEDLINE | ID: mdl-33787455

ABSTRACT

The present study evaluated the influence of the variables polyethylene glycol (PEG) molar mass, pH, PEG concentration and sodium citrate concentration in the integrated production of the protease from Aspergillus tamarii Kita UCP1279 by extractive fermentation, obtaining as a response the partition coefficient (K), activity yield (Y) and concentration factor (CF). The enzyme preferably partitioned to the top phase and obtained in the system formed by variables MPEG = 400 g mol-1, CPEG = 20% (w w-1), and CCIT = 20% (w w-1) and pH 6, in this condition were obtained CF = 1.90 and Y = 79.90%. The protease showed stability at a temperature of 60 °C for 180 min, with optimum temperature 40 °C and pH 8.0. For the ions and inhibitors effects, the protease activity increased when exposed to Fe2+, Ca2+ and Zn2 + and inhibited by EDTA, being classified as metalloprotease. The kinetic parameters Km (35.63 mg mL-1) and Vmax (1.205 mg mL-1 min-1) were also estimated. Thus, the protease showed desirable characteristics that enable future industrial applications, especially, for beer industry.


Subject(s)
Aspergillus/metabolism , Citric Acid/chemistry , Fungal Proteins/metabolism , Peptide Hydrolases/metabolism , Polyethylene Glycols/chemistry , Enzyme Stability , Fermentation , Fungal Proteins/isolation & purification , Hydrogen-Ion Concentration , Industrial Microbiology , Peptide Hydrolases/isolation & purification , Temperature
9.
Protein Expr Purif ; 190: 106006, 2022 02.
Article in English | MEDLINE | ID: mdl-34742913

ABSTRACT

l-asparaginase is a chemotherapeutic drug used in the treatment of acute lymphoblastic leukemia, a malignant disorder in children. l-asparaginase helps in removing acrylamide found in fried and baked foods which is carcinogenic in nature. The search for new therapeutic enzymes is of great interest in both medical and food applications. The present work aims to isolate the intracellular l-asparaginase from endophytic fungi Chaetomium sp. The intracellular enzyme was partially purified by chromatographic techniques. Molecular weight of enzyme was found to be ~66 kDa by SDS PAGE analysis. The enzyme is highly specific for l-asparagine and did not show glutaminase and urease activity. Maximum enzyme activity was found to be 58 ± 5 U/mL at 40 °C, pH 7.0 with 2 µg of protein. Intracellular l-asparaginase from Chaetomium sp. exhibited anticancer activity on human blood cancer (MOLT-4) cells.


Subject(s)
Antineoplastic Agents , Asparaginase , Chaetomium/enzymology , Fungal Proteins , Glutaminase/chemistry , Urease/chemistry , Antineoplastic Agents/chemistry , Antineoplastic Agents/isolation & purification , Antineoplastic Agents/pharmacology , Asparaginase/chemistry , Asparaginase/isolation & purification , Asparaginase/pharmacology , Cell Line, Tumor , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification , Fungal Proteins/pharmacology , Humans
10.
Protein Expr Purif ; 190: 106009, 2022 02.
Article in English | MEDLINE | ID: mdl-34742914

ABSTRACT

The enzymatic conversion of lignocellulosic biomass to fermentable sugars is determined by the enzymatic activity of cellulases; consequently, improving enzymatic activity has attracted great interest in the scientific community. Cocktails of commercial cellulase often have low ß-glucosidase content, leading to the accumulation of cellobiose. This accumulation inhibits the activity of the cellulolytic complex and can be used to determine the enzymatic efficiency of commercial cellulase cocktails. Here, a novel codon optimized ß-glucosidase gene (B-glusy) from Trichoderma reesei QM6a was cloned and expressed in three strains of Escherichia coli (E. coli). The synthetic sequence containing an open reading frame (ORF) of 1491 bp was used to encode a polypeptide of 497 amino acid residues. The ß-glucosidase recombinant protein that was expressed (57 kDa of molecular weight) was purified by Ni agarose affinity chromatography and visualized by SDS-PAGE. The recombinant protein was better expressed in E. coli BL21 (DE3), and its enzymatic activity was higher at neutral pH and 30 °C (22.4 U/mg). Subsequently, the ß-glucosidase was immobilized using magnetite nano-support, after which it maintained >65% of its enzymatic activity from pH 6 to 10, and was more stable than the free enzyme above 40 °C. The maximum immobilization yield had enzyme activity of 97.2%. In conclusion, ß-glucosidase is efficiently expressed in the microbial strain E. coli BL21 (DE3) grown in a simplified culture medium.


Subject(s)
Enzymes, Immobilized , Escherichia coli , Fungal Proteins , Gene Expression , Hypocreales/genetics , Magnetite Nanoparticles/chemistry , beta-Glucosidase , Enzyme Stability , Enzymes, Immobilized/biosynthesis , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/genetics , Enzymes, Immobilized/isolation & purification , Escherichia coli/genetics , Escherichia coli/metabolism , Fungal Proteins/biosynthesis , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Hypocreales/enzymology , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , beta-Glucosidase/biosynthesis , beta-Glucosidase/chemistry , beta-Glucosidase/genetics , beta-Glucosidase/isolation & purification
11.
Microb Cell Fact ; 20(1): 232, 2021 Dec 28.
Article in English | MEDLINE | ID: mdl-34963459

ABSTRACT

BACKGROUND: Proteins with novel functions or advanced activities developed by various protein engineering techniques must have sufficient solubility to retain their bioactivity. However, inactive protein aggregates are frequently produced during heterologous protein expression in Escherichia coli. To prevent the formation of inclusion bodies, fusion tag technology has been commonly employed, owing to its good performance in soluble expression of target proteins, ease of application, and purification feasibility. Thus, researchers have continuously developed novel fusion tags to expand the expression capacity of high-value proteins in E. coli. RESULTS: A novel fusion tag comprising carbohydrate-binding module 66 (CBM66) was developed for the soluble expression of heterologous proteins in E. coli. The target protein solubilization capacity of the CBM66 tag was verified using seven proteins that are poorly expressed or form inclusion bodies in E. coli: four human-derived signaling polypeptides and three microbial enzymes. Compared to native proteins, CBM66-fused proteins exhibited improved solubility and high production titer. The protein-solubilizing effect of the CBM66 tag was compared with that of two commercial tags, maltose-binding protein and glutathione-S-transferase, using poly(ethylene terephthalate) hydrolase (PETase) as a model protein; CBM66 fusion resulted in a 3.7-fold higher expression amount of soluble PETase (approximately 370 mg/L) compared to fusion with the other commercial tags. The intact PETase was purified from the fusion protein upon serial treatment with enterokinase and affinity chromatography using levan-agarose resin. The bioactivity of the three proteins assessed was maintained even when the CBM66 tag was fused. CONCLUSIONS: The use of the CBM66 tag to improve soluble protein expression facilitates the easy and economic production of high-value proteins in E. coli.


Subject(s)
Carbohydrates/chemistry , Escherichia coli/metabolism , Protein Engineering/methods , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Alcohol Dehydrogenase/biosynthesis , Alcohol Dehydrogenase/isolation & purification , Bacterial Proteins/biosynthesis , Bacterial Proteins/isolation & purification , Bone Morphogenetic Protein 7/biosynthesis , Bone Morphogenetic Protein 7/isolation & purification , Carrier Proteins/biosynthesis , Carrier Proteins/isolation & purification , Cloning, Molecular , Epidermal Growth Factor/biosynthesis , Epidermal Growth Factor/isolation & purification , Fungal Proteins/biosynthesis , Fungal Proteins/isolation & purification , Gene Expression , Humans , Hydrolases/biosynthesis , Hydrolases/isolation & purification , Inclusion Bodies/metabolism , Lipase/biosynthesis , Lipase/isolation & purification , Maltose-Binding Proteins , Protein Processing, Post-Translational , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/isolation & purification , Solubility , Vascular Endothelial Growth Factor A/biosynthesis , Vascular Endothelial Growth Factor A/isolation & purification
12.
Pak J Pharm Sci ; 34(4): 1333-1340, 2021 Jul.
Article in English | MEDLINE | ID: mdl-34799305

ABSTRACT

Extra cellular ß-galactosidase enzyme was purified and characterized from Aspergillus fumigatus PCSIR- 2013. Estimated molecular mass of the enzyme was approximately 95 kDa. by native polyacrylamide gel electrophoresis. Initially, different fermentation parameters were optimized for maximum production of ß-galactosidase. The kinetic study of the partially purified enzyme exhibited that it remained active in broad range of temperature from 25°C to 70°C with an optimum of 60°C. The Km and Vmax were calculated as 9.95mmol/l and 51.78 U/ml/min, respectively. The optimum pH was 5.0, when reaction mixture was incubated for 30 min. The enzyme was very stable in the presence of different metal ions, although Na+ (16%) stimulates the activity at 10mM concentration. In contrast, Ba+2 and Hg+2 have negative effect on enzyme activity and activity decreased to 54% and 19%, respectively. Thermo stability study was revealed that the enzyme retained 72% of its activity at 50°C. Whereas, when enzyme was incubated at 60°C for 120 min, its residual activity was decreased to 42.0%. However, the enzyme was completely inactivated at 80°C after 120 min of pre-incubation. Among different surfactant which incorporated with enzyme, Tween 20 and Triton X-100 both have stimulatory effect and activity increased to 29% and 17%, respectively.


Subject(s)
Aspergillus fumigatus/enzymology , Fungal Proteins/isolation & purification , beta-Galactosidase/isolation & purification , Fungal Proteins/metabolism , Hydrogen-Ion Concentration , Temperature , beta-Galactosidase/metabolism
13.
Biochemistry ; 60(47): 3633-3643, 2021 11 30.
Article in English | MEDLINE | ID: mdl-34738811

ABSTRACT

The copper-dependent lytic polysaccharide monooxygenases (LPMOs) are receiving attention because of their role in the degradation of recalcitrant biomass and their intriguing catalytic properties. The fundamentals of LPMO catalysis remain somewhat enigmatic as the LPMO reaction is affected by a multitude of LPMO- and co-substrate-mediated (side) reactions that result in a complex reaction network. We have performed kinetic studies with two LPMOs that are active on soluble substrates, NcAA9C and LsAA9A, using various reductants typically employed for LPMO activation. Studies with NcAA9C under "monooxygenase" conditions showed that the impact of the reductant on catalytic activity is correlated with the hydrogen peroxide-generating ability of the LPMO-reductant combination, supporting the idea that a peroxygenase reaction is taking place. Indeed, the apparent monooxygenase reaction could be inhibited by a competing H2O2-consuming enzyme. Interestingly, these fungal AA9-type LPMOs were found to have higher oxidase activity than bacterial AA10-type LPMOs. Kinetic analysis of the peroxygenase activity of NcAA9C on cellopentaose revealed a fast stoichiometric conversion of high amounts of H2O2 to oxidized carbohydrate products. A kcat value of 124 ± 27 s-1 at 4 °C is 20 times higher than a previously described kcat for peroxygenase activity on an insoluble substrate (at 25 °C) and some 4 orders of magnitude higher than typical "monooxygenase" rates. Similar studies with LsAA9A revealed differences between the two enzymes but confirmed fast and specific peroxygenase activity. These results show that the catalytic site arrangement of LPMOs provides a unique scaffold for highly efficient copper redox catalysis.


Subject(s)
Biodegradation, Environmental , Fungal Proteins/metabolism , Mixed Function Oxygenases/metabolism , Polysaccharides/metabolism , Biomass , Catalytic Domain , Copper/chemistry , Copper/metabolism , Enzyme Assays , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Hydrogen Peroxide/metabolism , Kinetics , Lentinula/enzymology , Mixed Function Oxygenases/genetics , Mixed Function Oxygenases/isolation & purification , Neurospora crassa/enzymology , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism
14.
Biomed Pharmacother ; 144: 112339, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34656057

ABSTRACT

Colorectal cancer is the second deadly cancer in the world. Trametes versicolor is a traditional Chinese medicinal mushroom with a long history of being used to regulate immunity and prevent cancer. Trametes versicolor mushroom extract demonstrates strongly cell growth inhibitory activity on human colorectal tumor cells. In this study, we characterized a novel 12-kDa protein that named musarin, which was purified from Trametes versicolor mushroom extract and showed significant growth inhibition on multiple human colorectal cancer cell lines in vitro. The protein sequence of musarin was determined through enzyme digestion and MS/MS analysis. Furthermore, Musarin, in particular, strongly inhibits aggressive human colorectal cancer stem cell-like CD24+CD44+ HT29 proliferation in vitro and in a NOD/SCID murine xenograft model. Through whole transcription profile and gene enrichment analysis of musarin-treated CSCs-like cells, major signaling pathways and network modulated by musarin have been enriched, including the bioprocess of the Epithelial-Mesenchymal Transition, the EGFR-Ras signaling pathway and enzyme inhibitor activity. Musarin demonstrated tyrosine kinase inhibitory activity in vitro. Musarin strongly attenuated EGFR expression and down-regulated phosphorylation level, thereby slowing cancer cells proliferation. In addition, oral ingestion of musarin significantly inhibited CD24+CD44+ HT29 generated tumor development in SCID/NOD mice with less side effects in microgram doses. Targeting self-renewal aggressive stem-cell like cancer cell proliferation, with higher water solubility and lower cytotoxicity, musarin has shown strong potence to be developed as a promising novel therapeutic drug candidate against colorectal cancers, especially those that acquire chemo-resistance.


Subject(s)
Antineoplastic Agents/pharmacology , Cell Proliferation/drug effects , Colorectal Neoplasms/drug therapy , Fungal Proteins/pharmacology , Neoplastic Stem Cells/drug effects , Polyporaceae , Protein Kinase Inhibitors/pharmacology , Animals , Antineoplastic Agents/isolation & purification , Antineoplastic Agents/toxicity , Colorectal Neoplasms/enzymology , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , ErbB Receptors/antagonists & inhibitors , ErbB Receptors/genetics , ErbB Receptors/metabolism , Fungal Proteins/isolation & purification , Fungal Proteins/toxicity , Gene Expression Regulation, Neoplastic , Gene Regulatory Networks , HT29 Cells , Humans , Male , Mice, Inbred NOD , Mice, SCID , Neoplastic Stem Cells/enzymology , Neoplastic Stem Cells/pathology , Polyporaceae/chemistry , Protein Kinase Inhibitors/isolation & purification , Protein Kinase Inhibitors/toxicity , Signal Transduction , Transcriptome , Tumor Burden/drug effects , Xenograft Model Antitumor Assays
15.
Molecules ; 26(20)2021 Oct 15.
Article in English | MEDLINE | ID: mdl-34684818

ABSTRACT

The use of monoamine oxidases (MAOs) in amine oxidation is a great example of how biocatalysis can be applied in the agricultural or pharmaceutical industry and manufacturing of fine chemicals to make a shift from traditional chemical synthesis towards more sustainable green chemistry. This article reports the screening of fourteen Antarctic fungi strains for MAO activity and the discovery of a novel psychrozyme MAOP3 isolated from the Pseudogymnoascus sp. P3. The activity of the native enzyme was 1350 ± 10.5 U/L towards a primary (n-butylamine) amine, and 1470 ± 10.6 U/L towards a secondary (6,6-dimethyl-3-azabicyclohexane) amine. MAO P3 has the potential for applications in biotransformations due to its wide substrate specificity (aliphatic and cyclic amines, pyrrolidine derivatives). The psychrozyme operates at an optimal temperature of 30 °C, retains 75% of activity at 20 °C, and is rather thermolabile, which is beneficial for a reduction in the overall costs of a bioprocess and offers a convenient way of heat inactivation. The reported biocatalyst is the first psychrophilic MAO; its unique biochemical properties, substrate specificity, and effectiveness predispose MAO P3 for use in environmentally friendly, low-emission biotransformations.


Subject(s)
Amines/metabolism , Ascomycota/enzymology , Fungal Proteins/metabolism , Monoamine Oxidase/metabolism , Amines/chemistry , Ascomycota/classification , Ascomycota/genetics , Biocatalysis , Cold Temperature , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification , Green Chemistry Technology/methods , Kinetics , Models, Molecular , Monoamine Oxidase/chemistry , Monoamine Oxidase/isolation & purification , Monoamine Oxidase Inhibitors/pharmacology , Oxidation-Reduction , Protein Conformation , Substrate Specificity
16.
Int J Mol Sci ; 22(15)2021 Jul 22.
Article in English | MEDLINE | ID: mdl-34360609

ABSTRACT

Hydrophobins are small proteins (<20 kDa) with an amphipathic tertiary structure that are secreted by various filamentous fungi. Their amphipathic properties provide surfactant-like activity, leading to the formation of robust amphipathic layers at hydrophilic-hydrophobic interfaces, which make them useful for a wide variety of industrial fields spanning protein immobilization to surface functionalization. However, the industrial use of recombinant hydrophobins has been hampered due to low yield from inclusion bodies owing to the complicated process, including an auxiliary refolding step. Herein, we report the soluble expression of a recombinant class I hydrophobin DewA originating from Aspergillus nidulans, and its efficient purification from recombinant Escherichia coli. Soluble expression of the recombinant hydrophobin DewA was achieved by a tagging strategy using a systematically designed expression tag (ramp tag) that was fused to the N-terminus of DewA lacking the innate signal sequence. Highly expressed recombinant hydrophobin DewA in a soluble form was efficiently purified by a modified aqueous two-phase separation technique using isopropyl alcohol. Our approach for expression and purification of the recombinant hydrophobin DewA in E. coli shed light on the industrial production of hydrophobins from prokaryotic hosts.


Subject(s)
Aspergillus nidulans/metabolism , Fungal Proteins/isolation & purification , Fungal Proteins/metabolism , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Aspergillus nidulans/growth & development , Fungal Proteins/genetics , Hydrophobic and Hydrophilic Interactions , Recombinant Proteins/genetics , Surface Properties
17.
Appl Biochem Biotechnol ; 193(11): 3753-3764, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34398422

ABSTRACT

Nuclease P1 (NP1) can hydrolyze nucleic acids into four 5'-mononucleotides, which are widely used in the pharmaceutical and food industries. In this paper, an aqueous two-phase system (ATPS) was developed to purify NP1 from Penicillium citrinum. Polyethylene glycol (PEG) and nucleotides salts were studied to form ATPSs, among which PEG3000/disodium guanosine monophosphate (GMPNa2) was researched, including the phase composition and pH. Using 14% (w/w) PEG3000 and 20% (w/w) GMPNa2 ATPS at pH 5.0, the best recovery and purification factor, 82.4% and 3.59, were obtained. The recovery of NP1 was 98.3% by the separation of ultrafiltration from the PEG-rich phase. The recycling use of GMPNa2 was also studied, and 95.1% of GMPNa2 in the salt-rich phase was obtained with the addition of ethanol as the solvent. These results showed that the ATPS was effective for purification of NP1.


Subject(s)
Fungal Proteins , Guanosine Monophosphate/chemistry , Penicillium/enzymology , Polyethylene Glycols/chemistry , Single-Strand Specific DNA and RNA Endonucleases , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification , Single-Strand Specific DNA and RNA Endonucleases/chemistry , Single-Strand Specific DNA and RNA Endonucleases/isolation & purification
18.
Molecules ; 26(15)2021 Jul 29.
Article in English | MEDLINE | ID: mdl-34361729

ABSTRACT

Tyrosinase (TYR) is a type III copper oxidase present in fungi, plants and animals. The inhibitor of human TYR plays a vital role in pharmaceutical and cosmetic fields by preventing synthesis of melanin in the skin. To search for an effective TYR inhibitor from various plant extracts, a kinetic study of TYR inhibition was performed with mushroom TYR. Among Panax ginseng, Alpinia galanga, Vitis vinifera and Moringa oleifera, the extracts of V. vinifera seed, A. galanga rhizome and M. oleifera leaf reversibly inhibited TYR diphenolase activity with IC50 values of 94.8 ± 0.2 µg/mL, 105.4 ± 0.2 µg/mL and 121.3 ± 0.4 µg/mL, respectively. Under the same conditions, the IC50 values of the representative TYR inhibitors of ascorbic acid and kojic acid were found at 235.7 ± 1.0 and 192.3 ± 0.4 µg/mL, respectively. An inhibition kinetics study demonstrated mixed-type inhibition of TYR diphenolase by A. galanga and V. vinifera, whereas a rare uncompetitive inhibition pattern was found from M. oleifera with an inhibition constant of Kii 73 µg/mL. Phytochemical investigation by HPLC-MS proposed luteolin as a specific TYR diphenolase ES complex inhibitor, which was confirmed by the inhibition kinetics of luteolin. The results clearly showed that studying TYR inhibition kinetics with plant extract mixtures can be utilized for the screening of specific TYR inhibitors.


Subject(s)
Enzyme Inhibitors/pharmacology , Fungal Proteins/antagonists & inhibitors , Luteolin/pharmacology , Monophenol Monooxygenase/antagonists & inhibitors , Moringa oleifera/chemistry , Agaricales/chemistry , Agaricales/enzymology , Alpinia/chemistry , Ascorbic Acid/chemistry , Ascorbic Acid/isolation & purification , Ascorbic Acid/pharmacology , Enzyme Assays , Enzyme Inhibitors/chemistry , Fungal Proteins/isolation & purification , High-Throughput Screening Assays , Inhibitory Concentration 50 , Kinetics , Luteolin/chemistry , Luteolin/isolation & purification , Monophenol Monooxygenase/isolation & purification , Panax/chemistry , Plant Extracts/chemistry , Plant Extracts/pharmacology , Plant Leaves/chemistry , Pyrones/chemistry , Pyrones/isolation & purification , Pyrones/pharmacology , Rhizome/chemistry , Seeds/chemistry , Vitis/chemistry
19.
Molecules ; 26(15)2021 Jul 30.
Article in English | MEDLINE | ID: mdl-34361776

ABSTRACT

In this study, we examined aqueous extracts of the edible mushrooms Pleurotus ostreatus (oyster mushroom) and Lentinula edodes (shiitake mushroom). Proteome analysis was conducted using LC-Triple TOF-MS and showed the expression of 753 proteins by Pleurotus ostreatus, and 432 proteins by Lentinula edodes. Bioactive peptides: Rab GDP dissociation inhibitor, superoxide dismutase, thioredoxin reductase, serine proteinase and lectin, were identified in both mushrooms. The extracts also included promising bioactive compounds including phenolics, flavonoids, vitamins and amino acids. The extracts showed promising antiviral activities, with a selectivity index (SI) of 4.5 for Pleurotus ostreatus against adenovirus (Ad7), and a slight activity for Lentinula edodes against herpes simplex-II (HSV-2). The extracts were not cytotoxic to normal human peripheral blood mononuclear cells (PBMCs). On the contrary, they showed moderate cytotoxicity against various cancer cell lines. Additionally, antioxidant activity was assessed using DPPH radical scavenging, ABTS radical cation scavenging and ORAC assays. The two extracts showed potential antioxidant activities, with the maximum activity seen for Pleurotus ostreatus (IC50 µg/mL) = 39.46 ± 1.27 for DPPH; 11.22 ± 1.81 for ABTS; and 21.40 ± 2.20 for ORAC assays. This study encourages the use of these mushrooms in medicine in the light of their low cytotoxicity on normal PBMCs vis à vis their antiviral, antitumor and antioxidant capabilities.


Subject(s)
Antineoplastic Agents/chemistry , Antioxidants/chemistry , Antiviral Agents/chemistry , Fungal Proteins/chemistry , Pleurotus/chemistry , Proteome/chemistry , Shiitake Mushrooms/chemistry , Amino Acids/chemistry , Amino Acids/isolation & purification , Antineoplastic Agents/isolation & purification , Antineoplastic Agents/pharmacology , Antioxidants/isolation & purification , Antioxidants/pharmacology , Antiviral Agents/isolation & purification , Antiviral Agents/pharmacology , Benzothiazoles/antagonists & inhibitors , Biphenyl Compounds/antagonists & inhibitors , Cell Line, Tumor , Cell Survival/drug effects , Complex Mixtures/chemistry , Flavonoids/chemistry , Flavonoids/isolation & purification , Fungal Proteins/classification , Fungal Proteins/isolation & purification , Humans , Lectins/chemistry , Lectins/isolation & purification , Leukocytes, Mononuclear/cytology , Leukocytes, Mononuclear/drug effects , Organ Specificity , Phenols/chemistry , Phenols/isolation & purification , Picrates/antagonists & inhibitors , Pleurotus/metabolism , Primary Cell Culture , Proteome/classification , Proteome/isolation & purification , Serine Proteases/chemistry , Serine Proteases/isolation & purification , Shiitake Mushrooms/metabolism , Sulfonic Acids/antagonists & inhibitors , Superoxide Dismutase/chemistry , Superoxide Dismutase/isolation & purification , Thioredoxin-Disulfide Reductase/chemistry , Thioredoxin-Disulfide Reductase/isolation & purification , Vitamins/chemistry , Vitamins/isolation & purification , Water/chemistry
20.
Biomolecules ; 11(6)2021 06 02.
Article in English | MEDLINE | ID: mdl-34199365

ABSTRACT

Psychrophilic laccases catalyzing the bond formation in mild, environmentally friendly conditions are one of the biocatalysts at the focus of green chemistry. Screening of 41 cold-adapted strains of yeast and yeast-like fungi revealed a new laccase-producing strain, which was identified as Kabatiella bupleuri G3 IBMiP according to the morphological characteristics and analysis of sequences of the D1/D2 regions of 26S rDNA domain and the ITS1-5,8S-ITS2 region. The extracellular activity of laccase in reaction with 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) at the optimal pH 3.5 was 215 U/L after 15 days of growth in a medium with waste material and 126 U/L after 25 days of cultivation in a defined medium. Copper (II) ions (0.4 mM), Tween 80 (1.0 mM) and ascorbic acid (5.0 mM) increased the production of laccase. The optimum temperature for enzyme operation is in the range of 30-40 °C and retains over 60% of the maximum activity at 10 °C. New laccase shows high thermolability-half-life at 40 °C was only 60 min. Enzyme degradation of synthetic dyes was the highest for crystal violet, i.e., 48.6% after 1-h reaction with ABTS as a mediator. Outcomes of this study present the K. bupleuri laccase as a potential psychrozyme for environmental and industrial applications.


Subject(s)
Ascomycota/enzymology , Coloring Agents/chemistry , Fungal Proteins , Gentian Violet/chemistry , Laccase , Enzyme Stability , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification , Hot Temperature , Laccase/chemistry , Laccase/isolation & purification
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