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1.
PLoS One ; 19(5): e0304452, 2024.
Article in English | MEDLINE | ID: mdl-38820510

ABSTRACT

Lesser prairie-chicken (Tympanuchus pallidicinctus) populations of in the Sand Sagebrush Prairie Ecoregion of southwest Kansas and southeast Colorado, USA, have declined sharply since the mid-1980s. Decreased quality and availability of habitat are believed to be the main drivers of declines. Our objective was to reconstruct broad-scale change in the ecoregion since 1985 as a potential factor in population declines. We assessed temporal change from 1985-2015 in landcover types and calculated landscape metrics using Land Change Monitoring, Assessment, and Projection imagery layers. We also documented presence of anthropogenic structures including oil wells and electrical transmission lines. Landcover type composition changed little since 1990 across the Sand Sagebrush Prairie Ecoregion. However, anthropogenic structures (i.e., oil/gas wells, cell towers, wind farms, and transmission lines) notably increased, potentially causing functional habitat loss at a broad scale. Increased anthropogenic structures may have decreased habitat availability as well as the quality of existing habitat for lesser prairie-chickens, possibly contributing to recent population declines throughout the Sand Sagebrush Prairie Ecoregion.


Subject(s)
Grassland , Animals , Ecosystem , Kansas , Conservation of Natural Resources , Colorado , Galliformes/physiology , Population Dynamics
2.
Poult Sci ; 103(7): 103743, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38676964

ABSTRACT

Improving the reproductive performance of guinea fowl (Numida meleagris) based on the management of environmental factors is important for developing meleagriculture. Thus, the present study was conducted to evaluate the effect of dietary crude protein levels and photoperiod during the 12th to 26th wk of age on growth performance, calcium and phosphorus mobilization, and fertility of local Pearl Gray male guinea fowl. In total, 120 twelve-week-old male guinea fowl were divided into 3 groups with 8 replicates each and 5 birds per replicate using a completely random design. The experimental groups included: a group fed a diet containing 15% crude protein and subjected to 16 h of light and 8 h of darkness (16LL), a group fed a diet containing 19% crude protein and subjected to 16 h of light and 8 h of darkness (16HL), and a group fed a diet containing 15% crude protein and subjected to 18 h of light and 6 h of darkness (18LL) during the 12th to 26th wk of age. The results showed that guinea fowl in the 16HL treatment had a significantly (P = 0.003) lower feed conversion ratio than those in the 16LL and 18LL groups. Calcium and phosphorus levels in the tibia and femur were significantly higher (P < 0.05) in guinea fowl of the 16HL and 18LL groups than in that of the 16LL group. Birds in the 16HL and 18LL treatments had significantly higher peripheral testosterone levels (P < 0.00001) than those in the 16LL treatment. The 16HL and 18LL treatments had significantly higher (P < 0.05) sperm volume, sperm concentration and motility, and fertility rate than the 16LL group. Therefore, a decrease in crude protein level from 19 to 15% in the diet of male guinea fowl between the 12th and 26th wk of age negatively affects the growth performance and fertility of these birds, but this is corrected by an increase in the photoperiod before sexual maturity.


Subject(s)
Animal Feed , Diet , Dietary Proteins , Fertility , Galliformes , Photoperiod , Animals , Male , Galliformes/physiology , Animal Feed/analysis , Diet/veterinary , Dietary Proteins/administration & dosage , Dietary Proteins/metabolism , Phosphorus/metabolism , Random Allocation , Calcium/metabolism , Calcium/analysis
3.
J Morphol ; 284(12): e21652, 2023 12.
Article in English | MEDLINE | ID: mdl-37990765

ABSTRACT

Colourful signals have long been implicated as indicators of individual quality in animals. Bare-skin signals are an understudied aspect of avian colouration compared with plumage studies, despite displaying rapid changes in size and colour in response to different environmental or physiological stressors. Even fewer studies have focused on the underlying histology of these structures and the importance this plays in the resulting skin colour. Using the Black Grouse (Lyrurus tetrix), we identified the underlying structure of individual dermal spikes, which make up the red supra-orbital comb (a known integumentary signal of male quality), and highlight visual structural differences between combs of different sizes. In addition, we used Raman spectroscopy to indicate the presence of carotenoids within the tissue, something that had previously only been inferred through characteristic reflectance patterns. An increased understanding of the structural basis of colour of featherless parts of the skin opens up exciting new avenues for interpreting the information content of integumentary signals.


Subject(s)
Carotenoids , Galliformes , Male , Animals , Galliformes/physiology , Microscopy, Electron, Transmission
4.
Integr Comp Biol ; 63(3): 772-784, 2023 09 15.
Article in English | MEDLINE | ID: mdl-37516443

ABSTRACT

Birds are well known for their ability to fly, and flight-capable adult birds have many anatomical specializations for meeting the demands of aerial locomotion. Juvenile birds in altricial species typically acquire these specializations close to fledging and leave the nest with some flight capability. In contrast, juveniles in most precocial species begin navigating their environment with rudimentary anatomies and may not develop full-sized wings or musculoskeletal apparatuses for several months. This manuscript explores how juvenile birds achieve high levels of locomotor performance in the absence of flight specializations, by synthesizing work on two groups of precocial birds with very different developmental strategies. Galliforms like the Chukar Partridge (Alectoris chukar) have early wing development and are capable of flight within weeks. Compared with adults, juvenile chukars have less aerodynamically effective feathers and smaller muscles but compensate through anatomical, kinematic, and behavioral mechanisms. In contrast, waterfowl have delayed wing development and initially rely on leg-based locomotion. In Mallards (Anas platyrhynchos) and their domesticated derivatives, leg investment and performance peak early in ontogeny, but then decline when wings develop. Chukar and mallard juveniles thus rely on different mechanisms for negotiating their surroundings in the absence of flight specializations. In conjunction with work in other animals, these patterns indicate that juveniles with developing locomotor apparatuses can achieve surprisingly high levels of locomotor performance through a variety of compensatory mechanisms.


Subject(s)
Flight, Animal , Galliformes , Animals , Flight, Animal/physiology , Locomotion , Galliformes/physiology , Wings, Animal , Feathers
5.
J Exp Biol ; 226(13)2023 07 01.
Article in English | MEDLINE | ID: mdl-37334740

ABSTRACT

The work loop technique has provided key insights into in vivo muscle work and power during steady locomotion. However, for many animals and muscles, ex vivo experiments are not feasible. In addition, purely sinusoidal strain trajectories lack variations in strain rate that result from variable loading during locomotion. Therefore, it is useful to develop an 'avatar' approach in which in vivo strain and activation patterns from one muscle are replicated in ex vivo experiments on a readily available muscle from an established animal model. In the present study, we used mouse extensor digitorum longus (EDL) muscles in ex vivo experiments to investigate in vivo mechanics of the guinea fowl lateral gastrocnemius (LG) muscle during unsteady running on a treadmill with obstacle perturbations. In vivo strain trajectories from strides down from obstacle to treadmill, up from treadmill to obstacle, strides with no obstacle and sinusoidal strain trajectories at the same amplitude and frequency were used as inputs in work loop experiments. As expected, EDL forces produced with in vivo strain trajectories were more similar to in vivo LG forces (R2=0.58-0.94) than were forces produced with the sinusoidal trajectory (average R2=0.045). Given the same stimulation, in vivo strain trajectories produced work loops that showed a shift in function from more positive work during strides up from treadmill to obstacle to less positive work in strides down from obstacle to treadmill. Stimulation, strain trajectory and their interaction had significant effects on all work loop variables, with the interaction having the largest effect on peak force and work per cycle. These results support the theory that muscle is an active material whose viscoelastic properties are tuned by activation, and which produces forces in response to deformations of length associated with time-varying loads.


Subject(s)
Galliformes , Running , Mice , Animals , Biomechanical Phenomena , Locomotion/physiology , Muscle, Skeletal/physiology , Galliformes/physiology , Muscle Contraction/physiology
6.
J Exp Biol ; 226(12)2023 06 15.
Article in English | MEDLINE | ID: mdl-37282982

ABSTRACT

Recent studies of in vivo muscle function in guinea fowl revealed that distal leg muscles rapidly modulate force and work to stabilize running in uneven terrain. Previous studies focused on running only, and it remains unclear how muscular mechanisms for stability differ between walking and running. Here, we investigated in vivo function of the lateral gastrocnemius (LG) during walking over obstacles. We compared muscle function in birds with intact (iLG) versus self-reinnervated LG (rLG). Self-reinnervation results in proprioceptive feedback deficit due to loss of monosynaptic stretch reflex. We tested the hypothesis that proprioceptive deficit results in decreased modulation of EMG activity in response to obstacle contact, and a delayed obstacle recovery compared with that for iLG. We found that total myoelectric intensity (Etot) of iLG increased by 68% in obstacle strides (S 0) compared with level terrain, suggesting a substantial reflex-mediated response. In contrast, Etot of rLG increased by 31% in S 0 strides compared with level walking, but also increased by 43% in the first post-obstacle (S +1) stride. In iLG, muscle force and work differed significantly from level walking only in the S 0 stride, indicating a single-stride recovery. In rLG, force increased in S 0, S +1 and S +2 compared with level walking, indicating three-stride obstacle recovery. Interestingly, rLG showed little variation in work output and shortening velocity in obstacle terrain, indicating a shift towards near-isometric strut-like function. Reinnervated birds also adopted a more crouched posture across level and obstacle terrains compared with intact birds. These findings suggest gait-specific control mechanisms in walking and running.


Subject(s)
Galliformes , Walking , Animals , Biomechanical Phenomena , Walking/physiology , Muscle, Skeletal/physiology , Gait/physiology , Galliformes/physiology
7.
PLoS One ; 18(6): e0286478, 2023.
Article in English | MEDLINE | ID: mdl-37267264

ABSTRACT

Shrublands globally have undergone structural changes due to plant invasions, including the expansion of native trees. Removal of native conifer trees, especially juniper (Juniperus spp.), is occurring across the Great Basin of the western U.S. to support declining sagebrush (Artemisia spp.) habitats and associated wildlife species, such as greater sage-grouse (Centrocercus urophasianus). One justification for conifer removal is that it may improve survival of sagebrush-associated wildlife by reducing the abundance of avian predators. However, the relationship between conifer expansion and predator distributions has not been explicitly evaluated. Further, although structural characteristics of habitat are important for generalist predators, overall prey abundance may also affect habitat use by predators. We examined habitat use of common ravens (Corvus corax) and red-tailed hawks (Buteo jamaicensis), two generalist predators whose populations are increasing in western North America, to variation in structural characteristics and prey distributions in sagebrush habitat that has experienced conifer expansion. Structural characteristics of habitat were important predictors of habitat use for both ravens and red-tailed hawks, whereas measures of prey abundance were unimportant for both species likely because generalist predators can use a wide variety of food resources. Ravens, but not red-tailed hawks, responded positively to increasing cover of juniper and the probability of habitat use was highest (> 0.95) where juniper cover within 100 m was > 20%. Habitat use by red-tailed hawks, but not ravens, was greater near cliffs but was not associated with juniper cover. Our study suggests that the removal of conifer in similar environments may lower the probability of habitat use for ravens, a common predator with significant impacts on many prey species. Therefore, we suggest conifer removal may improve sage-grouse reproductive success and survival depending on responses to conifer removal from other predators. Our results may be reflective of similar changes in rangeland ecosystems around the world undergoing expansion of conifer and other woody vegetation. Though species identities differ from sagebrush habitats, generalist avian predators in other habitats may have similar relationships with structural resources.


Subject(s)
Artemisia , Galliformes , Juniperus , Tracheophyta , Animals , Ecosystem , Galliformes/physiology , Animals, Wild , North America , Quail
8.
Environ Manage ; 70(2): 288-306, 2022 08.
Article in English | MEDLINE | ID: mdl-35687203

ABSTRACT

Unprecedented conservation efforts for sagebrush (Artemisia spp.) ecosystems across the western United States have been catalyzed by risks from escalated wildfire activity that reduces habitat for sagebrush-obligate species such as Greater Sage-Grouse (Centrocercus urophasianus). However, post-fire restoration is challenged by spatial variation in ecosystem processes influencing resilience to disturbance and resistance to non-native invasive species, and spatial and temporal lags between slower sagebrush recovery processes and faster demographic responses of sage-grouse to loss of important habitat. Decision-support frameworks that account for these factors can help users strategically apply restoration efforts by predicting short and long-term ecological benefits of actions. Here, we developed a framework that strategically targets burned areas for restoration actions (e.g., seeding or planting sagebrush) that have the greatest potential to positively benefit sage-grouse populations through time. Specifically, we estimated sagebrush recovery following wildfire and risk of non-native annual grass invasion under four scenarios: passive recovery, grazing exclusion, active restoration with seeding, and active restoration with seedling transplants. We then applied spatial predictions of integrated nest site selection and survival models before wildfire, immediately following wildfire, and at 30 and 50 years post-wildfire based on each restoration scenario and measured changes in habitat. Application of this framework coupled with strategic planting designs aimed at developing patches of nesting habitat may help increase operational resilience for fire-impacted sagebrush ecosystems.


Subject(s)
Artemisia , Environmental Restoration and Remediation , Galliformes , Wildfires , Animals , Ecosystem , Galliformes/physiology , Nesting Behavior
9.
Philos Trans R Soc Lond B Biol Sci ; 377(1845): 20200442, 2022 02 28.
Article in English | MEDLINE | ID: mdl-35000453

ABSTRACT

In group-living vertebrates, dominance status often covaries with physiological measurements (e.g. glucocorticoid levels), but it is unclear how dominance is linked to dynamic changes in physiological state over a shorter, behavioural timescale. In this observational study, we recorded spontaneous aggression among captive juvenile pheasants (Phasianus colchicus) alongside infrared thermographic measurements of their external temperature, a non-invasive technique previously used to examine stress responses in non-social contexts, where peripheral blood is redirected towards the body core. We found low but highly significant repeatability in maximum head temperature, suggesting individually consistent thermal profiles, and some indication of lower head temperatures in more active behavioural states (e.g. walking compared to resting). These individual differences were partly associated with sex, females being cooler on average than males, but unrelated to body size. During pairwise aggressive encounters, we observed a non-monotonic temperature change, with head temperature dropping rapidly immediately prior to an attack and increasing rapidly afterwards, before returning to baseline levels. This nonlinear pattern was similar for birds in aggressor and recipient roles, but aggressors were slightly hotter on average. Our findings show that aggressive interactions induce rapid temperature changes in dominants and subordinates alike, and highlight infrared thermography as a promising tool for investigating the physiological basis of pecking orders in galliforms. This article is part of the theme issue 'The centennial of the pecking order: current state and future prospects for the study of dominance hierarchies'.


Subject(s)
Galliformes , Thermography , Aggression , Animals , Female , Galliformes/physiology , Male , Social Dominance
10.
PLoS One ; 16(10): e0253635, 2021.
Article in English | MEDLINE | ID: mdl-34610035

ABSTRACT

Hunter harvest is a potential factor contributing to population declines of sage-grouse (Centrocercus spp.). As a result, wildlife agencies throughout western North America have set increasingly more conservative harvest regulations over the past 25 years to reduce or eliminate hunter success and concomitant numbers of harvested greater (C. urophasianus) and Gunnison (C. minimus) sage-grouse. Sage-grouse hunting has varied widely over time and space, which has made a comprehensive summary of hunting management challenging. We compiled data on harvest regulations among 11 western U.S. states and 2 Canadian provinces from 1870-2019 to create a timeline representative of hunting regulations. We compared annual harvest boundaries and area-weighted average hunting regulations, 1995-2018, relative to administrative boundaries and areas of high probability of sage-grouse occupation. We also summarized estimated numbers of birds harvested and hunters afield, 1995-2018, across both species' ranges. From 1995-2018, there was a 30% reduction in administrative harvest boundaries across the greater sage-grouse range compared to a 16.6% reduction in area open to harvest within 8 km from active leks. Temporary closures occurred in response to wildfires, disease outbreaks, low population numbers, and two research projects; whereas, permanent closures primarily occurred in small populations and areas on the periphery of the species distribution. Similarly, area-weighted possession limits and season length for greater sage-grouse decreased 52.6% and 61.0%, respectively, while season start date stayed relatively stable (mean start date ~259 [mid-September]). In contrast, hunting of the now federally-threatened Gunnison sage-grouse ended after 1999. While restrictions in harvest regulations were large in area, closures near areas of high greater sage-grouse occupancy were relatively smaller with the same trend for Gunnison sage-grouse until hunting ceased. For greater sage-grouse, most states reduced bag and possession limits and appeared to adhere to recommendations for later and shorter hunting seasons, reducing potential for additive mortality.


Subject(s)
Animals, Wild/physiology , Galliformes/physiology , Animals , Conservation of Natural Resources , Ecosystem , North America , Population Dynamics , Quail/physiology , Seasons
11.
PLoS One ; 16(9): e0256633, 2021.
Article in English | MEDLINE | ID: mdl-34543290

ABSTRACT

Habitat loss from land-use change is one of the top causes of declines in wildlife species of concern. As such, it is critical to assess and reassess habitat suitability as land cover and anthropogenic features change for both monitoring and developing current information to inform management decisions. However, there are obstacles that must be overcome to develop consistent assessments through time. A range-wide lek habitat suitability model for the lesser prairie-chicken (Tympanuchus pallidicinctus), currently under review by the U. S. Fish and Wildlife Service for potential listing under the Endangered Species Act, was published in 2016. This model was based on lek data from 2002 to 2012, land cover data ranging from 2001 to 2013, and anthropogenic features from circa 2011, and has been used to help guide lesser prairie-chicken management and anthropogenic development actions. We created a second iteration model based on new lek surveys (2015 to 2019) and updated predictors (2016 land cover and cleaned/updated anthropogenic data) to evaluate changes in lek suitability and to quantify current range-wide habitat suitability. Only three of 11 predictor variables were directly comparable between the iterations, making it difficult to directly assess what predicted changes resulted from changes in model inputs versus actual landscape change. The second iteration model showed a similar positive relationship with land cover and negative relationship with anthropogenic features to the first iteration, but exhibited more variation among candidate models. Range-wide, more suitable habitat was predicted in the second iteration. The Shinnery Oak Ecoregion, however, exhibited a loss in predicted suitable habitat that could be due to predictor source changes. Iterated models such as this are important to ensure current information is being used in conservation and development decisions.


Subject(s)
Chickens/physiology , Conservation of Natural Resources , Endangered Species , Galliformes/physiology , Animals , Ecosystem , Grassland , Humans , Quail/physiology
12.
PLoS One ; 16(9): e0257198, 2021.
Article in English | MEDLINE | ID: mdl-34559848

ABSTRACT

Hunter harvest of greater sage-grouse (Centrocercus urophasianus; hereafter "sage-grouse") has been regulated by wildlife agencies during most of the past century. Hunting season regulations were maintained with the intention of providing sustainable hunting opportunities. Sage-grouse populations oscillate over time, and population growth can be influenced by seasonal weather and habitat disturbance. From 1995-2013, we compared sage-grouse lek trends from 22 relatively distinct sage-grouse population segments in 9 western U.S. states and 2 Canadian provinces. We stratified these populations into 3 broad categories (non-hunted [n = 8], continuously hunted [n = 10], and hunting season discontinued between 1996-2003 [n = 4]) with 8 different regulation histories to evaluate the potential impact of harvest on sage-grouse populations. Concomitantly, we assessed the effects of proportion burned, forested and cropland habitat; winter, spring, and summer precipitation; and human population, road, and oil and gas well densities on initial and time-varying lek counts. Density-dependent models fit lek trend data best for all regulation histories. In general, higher proportions of burnt, forested, and cropland habitat; and greater human population and oil and gas well densities were associated with lower equilibrium abundance (K). We found mixed results regarding the effect of hunting regulations on instantaneous growth rate (r). The cessation of harvest from 1996-2001 in approximately half of the largest sage-grouse population in our analysis was associated with higher r. Continuously harvested sage-grouse populations with permit hunting seasons had higher r during years with higher proportion of area exposed to permitted hunting rather than general upland game seasons. However, more liberal hunting regulations were positively associated with higher r in populations continuously harvested under general upland game hunts. Our results suggest that discontinuing harvest in the largest population resulted in greater population growth rates; however, this was not consistently the case for smaller populations. To no surprise, not all sage-grouse populations were influenced by the same environmental change or human disturbance factors. Our results will assist managers to understand factors associated with K, which provides the best targets for conservation efforts.


Subject(s)
Animals, Wild/physiology , Conservation of Natural Resources/methods , Environment , Galliformes/physiology , Human Activities , Population Dynamics , Animals , Canada , Ecosystem , Geography , Humans , Hunting , Oil and Gas Fields , Seasons , Weather
13.
Philos Trans R Soc Lond B Biol Sci ; 376(1836): 20200247, 2021 10 25.
Article in English | MEDLINE | ID: mdl-34482722

ABSTRACT

Understanding when learning begins is critical for identifying the factors that shape both the developmental course and the function of information acquisition. Until recently, sufficient development of the neural substrates for any sort of vocal learning to begin in songbirds was thought to be reached well after hatching. New research shows that embryonic gene activation and the outcome of vocal learning can be modulated by sound exposure in ovo. We tested whether avian embryos across lineages differ in their auditory response strength and sound learning in ovo, which we studied in vocal learning (Maluridae, Geospizidae) and vocal non-learning (Phasianidae, Spheniscidae) taxa. While measuring heart rate in ovo, we exposed embryos to (i) conspecific or heterospecific vocalizations, to determine their response strength, and (ii) conspecific vocalizations repeatedly, to quantify cardiac habituation, a form of non-associative learning. Response strength towards conspecific vocalizations was greater in two species with vocal production learning compared to two species without. Response patterns consistent with non-associative auditory learning occurred in all species. Our results demonstrate a capacity to perceive and learn to recognize sounds in ovo, as evidenced by habituation, even in species that were previously assumed to have little, if any, vocal production learning. This article is part of the theme issue 'Vocal learning in animals and humans'.


Subject(s)
Auditory Perception/physiology , Galliformes/physiology , Learning/physiology , Songbirds/physiology , Spheniscidae/physiology , Vocalization, Animal/physiology , Animals , Biological Evolution , Models, Biological , Social Behavior
14.
PLoS One ; 16(8): e0255483, 2021.
Article in English | MEDLINE | ID: mdl-34411127

ABSTRACT

Intensification of agricultural practices has drastically shaped farmland landscapes and generally caused a decline in spatial and temporal heterogeneity, thus leading to changes in habitat quality and food resources and a decline for most farmland birds Europe-wide. The relationship between complex landscape changes and habitat preferences of animals still remains poorly understood. Particularly, temporal and spatial changes in diversity may affect not only habitat choice but also population sizes. To answer that question, we have looked into a severely declining typical farmland bird species, the grey partridge Perdix perdix in a diverse farmland landscape near Vienna to investigate the specific habitat preferences in respect to the change of agricultural landscape over two decades and geographic scales. Using a dataset collected over 7.64 km² and between 2001 and 2017 around Vienna, we calculated Chesson's electivity index to study the partridge's change of habitat selection over time on two scales and between winter and spring in 2017. Although the farmland landscape underwent an ongoing diversification over the two decades, the grey partridges declined in numbers and shifted habitat use to less diverse habitats. During covey period in winter, partridges preferred also human infrastructure reservoirs such as roads and used more diverse areas with smaller fields than during breeding where they selected harvested fields but surprisingly, avoided hedges, fallow land and greening. Known as best partridge habitats, those structures when inappropriately managed might rather function as predator reservoirs. The avoidance behaviour may further be a consequence of increasing landscape structuring and edge effects by civilisation constructions. Besides, the loss in size and quality of partridge farmland is altered by crop choice and pesticides reducing plant and insect food. With declining breeding pairs, the grey partridge does not seem to adjust to these unsustainable landscape changes and farmland practices.


Subject(s)
Adaptation, Physiological , Agriculture/methods , Biodiversity , Ecosystem , Farms/statistics & numerical data , Galliformes/physiology , Social Planning , Animals , Humans , Population Density
15.
Zoo Biol ; 40(4): 346-351, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33724508

ABSTRACT

We describe unique reproductive features of two threatened Galliformes species, the Malaysian peacock-pheasant (Polyplectron malacense) and Bornean peacock-pheasant (P. schleiermacheri). These features pose challenges to successful captive breeding to build up sustainable populations for conservation purposes. Single egg clutches in both species mean that reproductive rates are low and population increase is slow. The very rounded eggs of Bornean Peacock-pheasant cause difficulties for egg orientation in incubators. Single chicks with special requirements are poorly suited to rearing by broody bantams and successful husbandry requires increased human time, commitment, and skills.


Subject(s)
Animals, Zoo , Endangered Species , Galliformes/physiology , Reproduction/physiology , Animal Husbandry , Animals , Conservation of Natural Resources , Female , Housing, Animal , Male , Ovum , Sexual Behavior, Animal
16.
Mol Phylogenet Evol ; 158: 107091, 2021 05.
Article in English | MEDLINE | ID: mdl-33545275

ABSTRACT

Building taxon-rich phylogenies is foundational for macroevolutionary studies. One approach to improve taxon sampling beyond individual studies is to build supermatricies of publicly available data, incorporating taxa sampled across different studies and utilizing different loci. Most existing supermatrix studies have focused on loci commonly sequenced with Sanger technology ("legacy" markers, such as mitochondrial data and small numbers of nuclear loci). However, incorporating phylogenomic studies into supermatrices allows problem nodes to be targeted and resolved with considerable amounts of data, while improving taxon sampling with legacy data. Here we estimate phylogeny from a galliform supermatrix which includes well-known model and agricultural species such as the chicken and turkey. We assembled a supermatrix comprising 4500 ultra-conserved elements (UCEs) collected as part of recent phylogenomic studies in this group and legacy mitochondrial and nuclear (intron and exon) sequences. Our resulting phylogeny included 88% of extant species and recovered well-accepted relationships with strong support. However, branch lengths, which are particularly important in down-stream macroevolutionary studies, appeared vastly skewed. Taxa represented only by rapidly evolving mitochondrial data had high proportions of missing data and exhibited long terminal branches. Conversely, taxa sampled for slowly evolving UCEs with low proportions of missing data exhibited substantially shorter terminal branches. We explored several branch length re-estimation methods with particular attention to terminal branches and conclude that re-estimation using well-sampled mitochondrial sequences may be a pragmatic approach to obtain trees suitable for macroevolutionary analysis.


Subject(s)
Galliformes/classification , Animals , Cell Nucleus/genetics , Databases, Genetic , Galliformes/genetics , Galliformes/physiology , Introns , Mitochondria/genetics , Phylogeny
17.
Trop Anim Health Prod ; 53(1): 89, 2021 Jan 07.
Article in English | MEDLINE | ID: mdl-33415538

ABSTRACT

Three guinea fowl populations from Northern Ghana were compared in terms of their body weight, growth rates, and survivability during the first 11 weeks of life. Keets (n = 865) were hatched from eggs collected from 32 sampling areas divided into eleven subpopulations within three populations in Northern Ghana. Together with an experimental flock maintained at Animal Research Institute (ARI flock), these birds were raised and appraised for weekly body weights, weekly growth rates, and survivability. Weekly body weights did not differ significantly (p > 0.05) among the three populations, although ARI flock were significantly heavier (p Ë‚ 0.05) compared to the main populations until the fourth week. In contrast, among the subpopulations, significant differences emerged in body weights from the second week and were more pronounced from the sixth week. Growth rates measured as weekly weight gains also differed significantly among subpopulations beyond the second week, although differences in growth rates were not significantly different among whole populations. The mean values for total feed intake, daily feed intake, and feed conversion ratio (FCR) did not vary significantly (p > 0.05) between the populations. Therefore, although the variations in body weight and growth rates were limited among the populations, there existed significant variations among subpopulations, creating opportunities to establish genetically divergent populations for growth rate and to improve early growth rates and body weights in local guinea fowls by selection. High survivability observed in the ARI flock compared to keets from the three populations of Northern Ghana was likely due to good breeder stock management practices despite their common ancestry.


Subject(s)
Galliformes/physiology , Longevity , Animals , Galliformes/growth & development , Ghana , Weight Gain
18.
Genes Brain Behav ; 20(3): e12704, 2021 03.
Article in English | MEDLINE | ID: mdl-32969588

ABSTRACT

Early animal domestication may have been driven by selection on tameness. Selection on only tameness can bring about correlated selection responses in other traits, not intentionally selected upon, which may be one cause of the domesticated phenotype. We predicted that genetically reduced fear towards humans in Red Junglefowl, ancestors of domesticated chickens, would be correlated to other traits included in the domesticated phenotype. Fear level was determined by a standardised behaviour test, where the reaction towards an approaching human was recorded. We first selected birds for eight generations for either high or low fear levels in this test, to create two divergent selection lines. An F3 intercross, with birds from the eighth generation as parentals, was generated to study correlations between fear-of-human scores and other unselected phenotypes, possibly caused by pleiotropy or linkage. Low fear-of-human scores were associated with higher body weight and growth rates, and with increased activity in an open field test, indicating less general fearfulness. In females, low fear-of-human scores were also associated with more efficient fear habituation and in males with an increased tendency to emit food calls in a mirror test, indicating increased social dominance. Low fear-of-human scores were also associated with smaller brain relative to body weight, and with larger cerebrum relative to total brain weight in females. All these effects are in line with the changes observed in domesticated chickens compared to their ancestors, and we conclude that tameness may have been a driving factor underlying some aspects of the domesticated phenotype.


Subject(s)
Behavior, Animal , Body Weight , Domestication , Fear , Galliformes/genetics , Animals , Brain/metabolism , Galliformes/physiology , Genetic Pleiotropy , Quantitative Trait, Heritable , Selective Breeding
19.
Trop Anim Health Prod ; 52(6): 3755-3767, 2020 Nov.
Article in English | MEDLINE | ID: mdl-33011906

ABSTRACT

A survey was conducted in Dry Savannah and Atakora agroecological zones in northern Togo, between March and July 2018, to characterise indigenous guinea fowl management practices. A semi-structured questionnaire was administered to 82 farmers in 28 villages. The data were analysed using the chi-square test or Fisher's exact test, independent-sample t test and the multiple correspondence analysis with SPSS and XLSTAT. The results showed that guinea fowl production was mainly practised by men (91.5%) who did not have training in guinea fowl production (68.4%). In traditional poultry farming, the most popular management method was the semi-intensive system (86.2%). Guinea fowl, which was raised primarily for sale (100%), was the main bird species with 68.2 ± 92.5 birds per farmer. All respondents provided a dietary supplement to guinea fowl with a feeding management that varied according to the birds' developmental stage. Wing drooping (89.3%), diarrhoea (67.4%) and drowsiness (64.7%) were the main clinical symptoms of diseases observed. The majority of respondents (68.2%) used both conventional veterinary products and ethno-veterinary plant products as drugs in order to control guinea fowl diseases. Guinea fowl started laying at 8.4 ± 1.6 months and had 128.5 ± 51.2 eggs per year. The indigenous hen that hatched eggs naturally had 43.6 ± 17.1 hatching eggs per year with a hatchability of 85.0%. For 85.4% of the respondents, survivability was the main problem in guinea fowl production. Improving the survivability of the birds could improve their productivity, as they play an important socio-economic role for most rural households.


Subject(s)
Animal Husbandry , Galliformes/physiology , Animal Feed , Animals , Data Collection , Female , Oviposition , Poultry Diseases/drug therapy , Poultry Diseases/prevention & control , Rural Population , Surveys and Questionnaires , Togo
20.
Article in English | MEDLINE | ID: mdl-33025058

ABSTRACT

Despite the excitement that followed the report of infrasound sensitivity in pigeons 40 years ago, there has been limited followup, with only eleven species of birds having auditory thresholds at frequencies below 250 Hz. With such sparse data on low-frequency hearing, there is little understanding of why some birds hear very low frequencies while others do not. To begin to expand the phylogenetic and ecological sample of low-frequency hearing in birds, we determined the behavioral audiogram of the Indian peafowl, Pavo cristatus. Peafowl are thought to use low frequencies generated by the males' tail feathers and wing flutters during courtship displays, and their crest feathers are reported to resonate at infrasound frequencies. The peafowl were able to respond to frequencies as low as 4 Hz, and their hearing range at 60 dB SPL extended from 29 Hz to 7.065 kHz (7.9 octaves). Removing the crest feathers reduced sensitivity at their resonant frequencies by as much as 7.5 dB, indicating a modest contribution to detectability in that range. However, perforation of the tympanic membranes severely reduced sensitivity to low frequencies, indicating that sensitivity to low frequencies is mediated primarily by the ears and cannot be attributed to some other sensory modality.


Subject(s)
Acoustic Stimulation/methods , Feathers/physiology , Galliformes/physiology , Hearing/physiology , Animals , Auditory Threshold , Phylogeny
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