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1.
Cells ; 10(11)2021 10 30.
Article in English | MEDLINE | ID: mdl-34831178

ABSTRACT

Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in childhood. Recently, we demonstrated the overexpression of both DNA methyltransferase 3A (DNMT3A) and 3B (DNMT3B) in RMS tumour biopsies and cell lines compared to normal skeletal muscle. Radiotherapy may often fail due to the abnormal expression of some molecules able to drive resistance mechanisms. The aim of this study was to analyse the involvement of DNMT3A and DNMT3B in radioresistance in RMS. RNA interference experiments against DNMT3A/3B were performed in embryonal RMS cells, upon ionizing radiation (IR) exposure and the effects of the combined treatment on RMS cells were analysed. DNMT3A and DNMT3B knocking down increased the sensitivity of RMS cells to IR, as indicated by the drastic decrease of colony formation ability. Interestingly, DNMT3A/3B act in two different ways: DNMT3A silencing triggers the cellular senescence program by up-regulating p16 and p21, whilst DNMT3B depletion induces significant DNA damage and impairs the DNA repair machinery (ATM, DNA-PKcs and Rad51 reduction). Our findings demonstrate for the first time that DNMT3A and DNMT3B overexpression may contribute to radiotherapy failure, and their inhibition might be a promising radiosensitizing strategy, mainly in the treatment of patients with metastatic or recurrent RMS tumours.


Subject(s)
DNA (Cytosine-5-)-Methyltransferases/metabolism , DNA Methyltransferase 3A/metabolism , Radiation Tolerance , Rhabdomyosarcoma, Embryonal/radiotherapy , Cell Cycle/radiation effects , Cell Differentiation/radiation effects , Cell Line, Tumor , Cell Proliferation/radiation effects , Cellular Senescence/radiation effects , Clone Cells , Cyclin-Dependent Kinase Inhibitor p21/metabolism , DNA (Cytosine-5-)-Methyltransferases/genetics , DNA Damage , DNA Methyltransferase 3A/genetics , Enzyme Activation/radiation effects , Gene Expression Regulation, Neoplastic , Gene Silencing/radiation effects , Histones/metabolism , Humans , Muscle Development/radiation effects , Radiation Tolerance/genetics , Radiation, Ionizing , Rhabdomyosarcoma, Embryonal/genetics , Up-Regulation/genetics , p38 Mitogen-Activated Protein Kinases/metabolism , DNA Methyltransferase 3B
2.
Chemistry ; 26(61): 14002-14010, 2020 Nov 02.
Article in English | MEDLINE | ID: mdl-32678486

ABSTRACT

RNA interference is an essential and powerful tool for targeting and verifying specific gene functions. Conditional control of small interfering RNA (siRNA) activity, especially using light activation, is a potential method for regulating target gene expression and functions. In this study, a series of photolabile siRNAs with amantadine modification have been rationally designed and developed through host-guest interactions between amantadine and ß-cyclodextrin derivatives to enhance the blocking effect of siRNA binding and/or RNA-induced silencing complex processing. These caged siRNAs with amantadine modification at the 5' end of antisense-strand RNA were efficiently inactivated through the host-guest interactions between amantadine and ß-cyclodextrin. Photomodulation of the gene silencing activity of these amantadine-modified caged siRNAs targeting both exogenous and endogenous genes was successfully achieved, which indicates that host-guest interactions could be a new strategy for developing new caged siRNAs for gene photoregulation with low leaking activity.


Subject(s)
Amantadine , Gene Silencing , RNA, Small Interfering , Amantadine/chemistry , Gene Expression/radiation effects , Gene Silencing/radiation effects , Photochemical Processes , RNA Interference , RNA, Small Interfering/chemistry , RNA, Small Interfering/genetics
3.
Cell Cycle ; 19(12): 1545-1561, 2020 06.
Article in English | MEDLINE | ID: mdl-32380926

ABSTRACT

The DUSP3 phosphatase regulates cell cycle, proliferation, apoptosis and senescence of different cell types, lately shown as a mediator of DNA repair processes. This work evaluated the impact of DUSP3 loss of function (lof) on DNA repair-proficient fibroblasts (MRC-5), NER-deficient cell lines (XPA and XPC) and translesion DNA synthesis (TLS)-deficient cells (XPV), after UV-radiation stress. The levels of DNA strand breaks, CPDs and 6-4-PPs have accumulated over time in all cells under DUSP3 lof, with a significant increase in NER-deficient lines. The inefficient repair of these lesions increased sub-G1 population of XPA and XPC cells 24 hours after UV treatment, notably marked by DUSP3 lof, which is associated with a reduced cell population in G1, S and G2/M phases. It was also detected an increase in S and G2/M populations of XPV and MRC-5 cells after UV-radiation exposure, which was slightly attenuated by DUSP3 lof due to a discrete increase in sub-G1 cells. The cell cycle progression was accompanied by changes in the levels of the main Cyclins (A1, B1, D1 or E1), CDKs (1, 2, 4 or 6), and the p21 Cip1 inhibitor, in a DUSP3-dependent manner. DUSP3 lof affected the proliferation of MRC-5 and XPA cells, with marked worsening of the XP phenotype after UV radiation. This work highlights the roles of DUSP3 in DNA repair fitness and in the fine control of regulatory proteins of cell cycle, essential mechanisms to maintenance of genomic stability.


Subject(s)
Cell Cycle Proteins/metabolism , DNA Repair/genetics , Dual Specificity Phosphatase 3/metabolism , Genomic Instability , Cell Cycle/radiation effects , Cell Proliferation/genetics , Cell Proliferation/radiation effects , DNA Damage , DNA Repair/radiation effects , Gene Silencing/radiation effects , Genomic Instability/radiation effects , Humans , Pyrimidine Dimers/metabolism , Stress, Physiological/radiation effects , Ultraviolet Rays
4.
Oxid Med Cell Longev ; 2020: 5135893, 2020.
Article in English | MEDLINE | ID: mdl-32190174

ABSTRACT

OBJECTIVE: The mechanism of enhanced radiosensitivity induced by mitochondrial uncoupling protein UCP2 was investigated in HeLa cells to provide a theoretical basis as a novel target for cervical cancer treatment. METHODS: HeLa cells were irradiated with 4 Gy X-radiation at 1.0 Gy/min. The expression of UCP2 mRNA and protein was assayed by real-time quantitative polymerase chain reaction and western blotting. UCP2 siRNA and negative control siRNA fragments were constructed and transfected into HeLa cells 24 h after irradiation. The effect of UCP2 silencing and irradiation on HeLa cells was determined by colony formation, CCK-8 cell viability, γH2AX immunofluorescence assay of DNA damage, Annexin V-FITC/PI apoptosis assay, and propidium iodide cell cycle assay. The effects on mitochondrial structure and function were investigated with fluorescent probes including dichlorodihydrofluorescein diacetate (DCFH-DA) assay of reactive oxygen species (ROS), rhodamine 123, and MitoTracker Green assay of mitochondrial structure and function. RESULTS: Irradiation upregulated UCP2 expression, and UCP2 knockdown decreased the survival of irradiated HeLa cells. UCP2 silencing sensitized HeLa cells to irradiation-induced DNA damage and led to increased apoptosis, cell cycle arrest in G2/M, and increased mitochondrial ROS. Increased radiosensitivity was associated with an activation of P53, decreased Bcl-2, Bcl-xl, cyclin B, CDC2, Ku70, and Rad51 expression, and increased Apaf-1, cytochrome c, caspase-3, and caspase-9 expression. CONCLUSIONS: UCP2 inhibition augmented the radiosensitivity of cervical cancer cells, and it may be a potential target of radiotherapy of advanced cervical cancer.


Subject(s)
Radiation Tolerance , Reactive Oxygen Species/metabolism , Uncoupling Protein 2/antagonists & inhibitors , Uterine Cervical Neoplasms/metabolism , Apoptosis/radiation effects , Autophagy/radiation effects , Cell Cycle Checkpoints/radiation effects , DNA Damage , DNA Repair/radiation effects , Down-Regulation/radiation effects , Female , Gene Silencing/radiation effects , HeLa Cells , Humans , Membrane Potential, Mitochondrial/radiation effects , Mitochondria/metabolism , Mitochondria/radiation effects , Models, Biological , Radiation Tolerance/radiation effects , Uncoupling Protein 2/genetics , Uncoupling Protein 2/metabolism , Uterine Cervical Neoplasms/pathology
5.
Dalton Trans ; 48(35): 13120-13124, 2019 Sep 21.
Article in English | MEDLINE | ID: mdl-31348472

ABSTRACT

Near-infrared photothermal-activated nanomaterials are emerging as a promising tool in precise cancer theranostics. This Frontier article highlights the recent advances of photothermal-activated nanoagents in biomedical applications, namely photothermal-initiated drug/contrast agent release, gene silencing, programmed targeting and gas theranostics. In the end, we give a perspective on the further development of photothermal-sensitive nanomedicines.


Subject(s)
Infrared Rays/therapeutic use , Neoplasms/diagnosis , Neoplasms/therapy , Phototherapy/methods , Theranostic Nanomedicine/methods , Gene Silencing/radiation effects , Humans , Neoplasms/genetics
6.
J Cell Physiol ; 233(12): 9594-9610, 2018 12.
Article in English | MEDLINE | ID: mdl-29943824

ABSTRACT

Copper is more likely than iron to generate reactive oxygen species (ROS) in a redox reaction due to its higher electrochemical reactivity. This study examined the effect of a newly synthesized Cu2+ binding compound, (E)-2-(4-(dimethylamino)phenylimino)methyl)quinolin-8-ol (DPMQ), on ultraviolet B (UVB) irradiation-induced cytotoxicity in human dermal fibroblasts. DPMQ induced Cu2+ influx as effectively as disulfiram, a Cu2+ ionophore anticancer drug. However, disulfiram induced ROS generation, mitochondrial dysfunction, and apoptosis in fibroblasts in a Cu2+ -dependent manner, whereas DPMQ was not only nontoxic, but protected cells against UVB irradiation-induced apoptosis in a Cu2+ -independent manner. UVB irradiation induced a Ca2+ -dependent increase in ROS generation, a decrease in Nrf2 levels, and activation of the mitochondrial apoptotic pathway, and these effects were prevented by DPMQ, which also increased Nrf2 nuclear translocation in a Cu2+ -independent manner. UVB irradiation activated 12-lipoxygenase and 12-hydroxyeicosatetraenoic acid (12-HETE), a product of 12-lipoxygenase, activated the TRPV1 channel. DMPQ did not act as a Ca2+ chelator, but inhibited the cytosolic Ca2+ increase induced by 12-HETE or capsaicin, but not that induced by bradykinin or ATP. Blockade of Ca2+ influx by pharmacological inhibition or silencing of the TRPV1 channel or chelation of cytosolic Ca2+ inhibited the UVB irradiation-induced Nrf2 reduction, ROS generation, mitochondrial dysfunction, and apoptosis. Taken together, our results suggest that Ca2+ influx via the TRPV1 channel is responsible for UVB irradiation-induced cytotoxicity and that DPMQ protects cells against UVB irradiation by inhibiting the TRPV1 channel and stabilizing Nrf2, and could thus be a potentially useful compound for the treatment of free radical-induced diseases.


Subject(s)
Copper/pharmacology , Cytoprotection , Ionophores/pharmacology , Quinolines/pharmacology , TRPV Cation Channels/metabolism , Ultraviolet Rays , Acetylcysteine/pharmacology , Apoptosis/drug effects , Apoptosis/radiation effects , Arachidonate 12-Lipoxygenase/metabolism , Caspase 3/metabolism , Cell Proliferation/drug effects , Cell Proliferation/radiation effects , Cytoprotection/drug effects , Cytoprotection/radiation effects , Dermis/cytology , Disulfiram/pharmacology , Enzyme Activation/drug effects , Enzyme Activation/radiation effects , Fibroblasts/cytology , Fibroblasts/drug effects , Fibroblasts/metabolism , Fibroblasts/radiation effects , Gene Silencing/drug effects , Gene Silencing/radiation effects , Humans , Ion Channel Gating/drug effects , Ion Channel Gating/radiation effects , Mitochondria/drug effects , Mitochondria/metabolism , Mitochondria/radiation effects , NF-E2-Related Factor 2/metabolism , Protective Agents/pharmacology , Reactive Oxygen Species/metabolism
7.
J Bacteriol ; 200(16)2018 08 15.
Article in English | MEDLINE | ID: mdl-29844033

ABSTRACT

NurA and HerA are thought to be essential proteins for DNA end resection in archaeal homologous recombination systems. Thermus thermophilus, an extremely thermophilic eubacterium, has proteins that exhibit significant sequence similarity to archaeal NurA and HerA. To unveil the cellular function of NurA and HerA in T. thermophilus, we performed phenotypic analysis of disruptant mutants of nurA and herA with or without DNA-damaging agents. The nurA and herA genes were not essential for survival, and their deletion had no effect on cell growth and genome integrity. Unexpectedly, these disruptants of T. thermophilus showed increased resistance to UV irradiation and mitomycin C treatment. Further, these disruptants and the wild type displayed no difference in sensitivity to oxidative stress and a DNA replication inhibitor. T. thermophilus NurA had nuclease activity, and HerA had ATPase. The overexpression of loss-of-function mutants of nurA and herA in the respective disruptants showed no complementation, suggesting their enzymatic activities were involved in the UV sensitivity. In addition, T. thermophilus NurA and HerA interacted with each other in vitro and in vivo, forming a complex with 2:6 stoichiometry. These results suggest that the NurA-HerA complex has an architecture similar to that of archaeal counterparts but that it impairs, rather than promotes, the repair of photoproducts and DNA cross-links in T. thermophilus cells. This cellular function is distinctly different from that of archaeal NurA and HerA.IMPORTANCE Many nucleases and helicases are engaged in homologous recombination-mediated DNA repair. Previous in vitro analyses in archaea indicated that NurA and HerA are the recombination-related nuclease and helicase. However, their cellular function had not been fully understood, especially in bacterial cells. In this study, we performed in vivo analyses to address the cellular function of nurA and herA in an extremely thermophilic bacterium, Thermus thermophilus As a result, T. thermophilus NurA and HerA exhibited an interfering effect on the repair of several instances of DNA damage in the cell, which is in contrast to the results in archaea. This finding will facilitate our understanding of the diverse cellular functions of the recombination-related nucleases and helicases.


Subject(s)
Bacterial Proteins/genetics , DNA Repair/radiation effects , Gene Silencing/radiation effects , Thermus thermophilus/genetics , Thermus thermophilus/radiation effects , Ultraviolet Rays , Amino Acid Sequence , DNA Damage/radiation effects , DNA Helicases/genetics , Homologous Recombination , Models, Molecular
8.
Cell Death Differ ; 24(11): 1925-1936, 2017 11.
Article in English | MEDLINE | ID: mdl-28753207

ABSTRACT

In addition to promoting cell death and senescence, p53 also has important cellular survival functions. A mutant p53, lacking a proline-rich domain (p53ΔP), that is deficient in controlling both cell death and cell cycle arrest, was employed to determine the biological means by which p53 mediates survival upon DNA damage. While p53ΔP and p53-/- cells were equally resistant to many DNA damaging agents, p53ΔP cells showed an exquisite resistance to high doses of the alkylating agent Diazald (N-Methyl-N-(p-tolylsulfonyl)nitrosamide), as compared to cells completely deficient for p53 function. We determined that p53ΔP was capable of transcribing the repair gene, MGMT (O6-methylguanine-DNA methyltransferase) after irradiation or alkylation damage, resulting in DNA repair and cell survival. Consistent with these observations, p53ΔP mice show enhanced survival after IR relative to p53-/- mice. Suppression or deletion of MGMT expression in p53ΔP cells inhibited DNA repair and survival after alkylation damage, whereas MGMT overexpression in p53-deficient cells facilitated DNA repair and conferred survival advantage. This study shows that when cell death and cell cycle arrest pathways are inhibited, p53 can still mediate MGMT-dependent repair, to promote cell survival upon DNA damage.


Subject(s)
DNA Damage , DNA Repair , O(6)-Methylguanine-DNA Methyltransferase/metabolism , Tumor Suppressor Protein p53/chemistry , Tumor Suppressor Protein p53/metabolism , Alkylation , Animals , Apoptosis/radiation effects , Apoptosis Regulatory Proteins/metabolism , Cell Cycle Checkpoints/radiation effects , Cell Line, Tumor , Cell Survival/radiation effects , Cellular Senescence , Cyclin-Dependent Kinase Inhibitor p21/metabolism , DNA Repair/radiation effects , Gene Silencing/radiation effects , Mice , O(6)-Methylguanine-DNA Methyltransferase/genetics , Proline/metabolism , Protein Domains , Proto-Oncogene Proteins/metabolism , Radiation, Ionizing , Structure-Activity Relationship
9.
Int J Radiat Biol ; 93(5): 494-506, 2017 05.
Article in English | MEDLINE | ID: mdl-28044469

ABSTRACT

PURPOSE: To uncover the role of EZH2 and its opponent ASHL2, a polycomb and trithorax group protein, respectively, on the radioresponsiveness of glioma cell lines. MATERIALS AND METHODS: Expression of EZH2 and ASHL2 was inhibited by siRNA in glioma cell lines. The effect on histone methylation, gene expression, DNA damage repair signaling, cell cycle checkpoints, apoptosis and tumor control were evaluated. RESULTS: Inhibition of EZH2 (EZH2i) led to a transcriptional dysregulation with upregulation of 544 and downregulation of 445 genes. In comparison, ASH2L inhibition (ASH2Li) had an opposed effect with upregulation of 289 and downregulation of 970 genes. EZH2i and ASH2Li significantly reduced methylation of H3K27 and increased methylation of H3K9, respectively. EZH2i and ASH2Li significantly increased and decreased the number of residual γH2AX foci at 24 h after IR, respectively. The former significantly increased radiation-induced cell cycle arrest in G2/M and apoptotic cell death, while ASH2Li decreased both. In addition, a significant shift of the radioresponse curve by -1.22 + 0.23 Gy (p < 0.0001) in the plaque monolayer assay was found after EZH2i in A7 but not in M059K. CONCLUSION: Overall, epigenetic modulation is a promising approach to evaluate the role of chromatin structure for the radioresponsiveness of glioma cell lines.


Subject(s)
DNA-Binding Proteins/genetics , Enhancer of Zeste Homolog 2 Protein/genetics , Epigenesis, Genetic/genetics , Glioma/genetics , Glioma/radiotherapy , Nuclear Proteins/genetics , Radiation Tolerance/genetics , Transcription Factors/genetics , Transcriptional Activation/genetics , Apoptosis/genetics , Apoptosis/radiation effects , Cell Line, Tumor , Dose-Response Relationship, Radiation , Epigenesis, Genetic/radiation effects , Gene Expression Regulation, Neoplastic/genetics , Gene Expression Regulation, Neoplastic/radiation effects , Gene Silencing/radiation effects , Glioma/pathology , Humans , Radiation Dosage , Transcriptional Activation/radiation effects
10.
PLoS Biol ; 14(9): e1002536, 2016 09.
Article in English | MEDLINE | ID: mdl-27584613

ABSTRACT

Drosophila melanogaster larvae irradiated with doses of ionizing radiation (IR) that kill about half of the cells in larval imaginal discs still develop into viable adults. How surviving cells compensate for IR-induced cell death to produce organs of normal size and appearance remains an active area of investigation. We have identified a subpopulation of cells within the continuous epithelium of Drosophila larval wing discs that shows intrinsic resistance to IR- and drug-induced apoptosis. These cells reside in domains of high Wingless (Wg, Drosophila Wnt-1) and STAT92E (sole Drosophila signal transducer and activator of transcription [STAT] homolog) activity and would normally form the hinge in the adult fly. Resistance to IR-induced apoptosis requires STAT and Wg and is mediated by transcriptional repression of the pro-apoptotic gene reaper. Lineage tracing experiments show that, following irradiation, apoptosis-resistant cells lose their identity and translocate to areas of the wing disc that suffered abundant cell death. Our findings provide a new paradigm for regeneration in which it is unnecessary to invoke special damage-resistant cell types such as stem cells. Instead, differences in gene expression within a population of genetically identical epithelial cells can create a subpopulation with greater resistance, which, following damage, survive, alter their fate, and help regenerate the tissue.


Subject(s)
Apoptosis/radiation effects , Drosophila Proteins/physiology , Epithelial Cells/radiation effects , Imaginal Discs/physiology , STAT Transcription Factors/physiology , Wnt1 Protein/physiology , Animals , Drosophila Proteins/genetics , Drosophila Proteins/metabolism , Drosophila melanogaster/cytology , Drosophila melanogaster/metabolism , Drosophila melanogaster/radiation effects , Epithelial Cells/physiology , Gene Expression , Gene Silencing/radiation effects , Imaginal Discs/cytology , Larva/cytology , Larva/physiology , Larva/radiation effects , Radiation Injuries, Experimental , Regeneration
11.
Mutat Res ; 790: 56-67, 2016 08.
Article in English | MEDLINE | ID: mdl-27131397

ABSTRACT

Plant stress responses at the epigenetic level are expected to allow more permanent changes of gene expression and potentially long-term adaptation. While it has been reported that plants subjected to adverse environments initiate various stress responses in their neighboring plants, little is known regarding epigenetic responses to external stresses mediated by plant-plant communication. In this study, we show that DNA repetitive elements of Arabidopsis thaliana, whose expression is inhibited epigenetically by transcriptional gene silencing (TGS) mechanism, are activated by UV-C irradiation through airborne plant-plant and plant-plant-plant communications, accompanied by DNA demethylation at CHH sites. Moreover, the TGS is alleviated by direct treatments with exogenous methyl jasmonate (MeJA) and methyl salicylate (MeSA). Further, the plant-plant and plant-plant-plant communications are blocked by mutations in the biosynthesis or signaling of jasmonic acid (JA) or salicylic acid (SA), indicating that JA and SA pathways are involved in the interplant communication for epigenetic responses. For the plant-plant-plant communication, stress cues are relayed to the last set of receiver plants by promoting the production of JA and SA signals in relaying plants, which exhibit upregulated expression of genes for JA and SA biosynthesis and enhanced emanation of MeJA and MeSA.


Subject(s)
Arabidopsis/genetics , Bystander Effect/genetics , Cyclopentanes/metabolism , Gene Silencing , Oxylipins/metabolism , Salicylic Acid/metabolism , Signal Transduction , Ultraviolet Rays , Arabidopsis/growth & development , Arabidopsis/metabolism , Arabidopsis/radiation effects , Bystander Effect/radiation effects , Gene Expression Regulation, Plant , Gene Silencing/radiation effects , Glucuronidase/genetics , Transcription, Genetic , Volatile Organic Compounds/metabolism
12.
DNA Cell Biol ; 35(8): 393-7, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27027475

ABSTRACT

Hepatocellular carcinoma (HCC) is one of the most common human malignancies around the world. The poor prognosis and high recurrence rate of HCC are largely the result of the high frequencies of intrahepatic and extrahepatic metastases. However, the treatment of metastasis is very limited. Ultrasound-targeted microbubble destruction (UTMD) technology has been recognized as a promising technology for drug and gene delivery in vivo and in vitro. Long noncoding RNA activated by transforming growth factor-ß (TGF-ß; lncRNA-ATB) was recently identified, which was upregulated in HCC metastases and associated with poor prognosis of HCC patients. In this study, we used microbubbles for UTMD-mediated siRNA transfection to silence lncRNA-ATB expression. We found that UTMD-mediated siRNA transfection significantly inhibited lncRNA-ATB expression and ZEB1 and ZEB2 expression and suppressed cell migration and invasion. We also demonstrated that transfecting siRNA against lncRNA-ATB by using UTMD was more efficient than that by using lipidosome. UTMD-mediated siRNA transfection against lncRNA-ATB may be a promising therapy for HCC metastasis.


Subject(s)
Gene Expression Regulation, Neoplastic , Hepatocytes/radiation effects , Microbubbles/therapeutic use , RNA, Long Noncoding/antagonists & inhibitors , RNA, Small Interfering/genetics , Ultrasonic Waves , Cell Line, Tumor , Cell Movement/radiation effects , Gene Silencing/radiation effects , Hepatocytes/metabolism , Hepatocytes/pathology , Humans , RNA, Long Noncoding/genetics , RNA, Long Noncoding/metabolism , RNA, Small Interfering/metabolism , Transforming Growth Factor beta/genetics , Transforming Growth Factor beta/metabolism
13.
J Integr Plant Biol ; 58(8): 737-48, 2016 Aug.
Article in English | MEDLINE | ID: mdl-26799169

ABSTRACT

The physiological role of plant mitochondrial glutathione peroxidases is scarcely known. This study attempted to elucidate the role of a rice mitochondrial isoform (GPX1) in photosynthesis under normal growth and salinity conditions. GPX1 knockdown rice lines (GPX1s) were tested in absence and presence of 100 mM NaCl for 6 d. Growth reduction of GPX1s line under non-stressful conditions, compared with non-transformed (NT) plants occurred in parallel to increased H2 O2 and decreased GSH contents. These changes occurred concurrently with photosynthesis impairment, particularly in Calvin cycle's reactions, since photochemical efficiency did not change. Thus, GPX1 silencing and downstream molecular/metabolic changes modulated photosynthesis differentially. In contrast, salinity induced reduction in both phases of photosynthesis, which were more impaired in silenced plants. These changes were associated with root morphology alterations but not shoot growth. Both studied lines displayed increased GPX activity but H2 O2 content did not change in response to salinity. Transformed plants exhibited lower photorespiration, water use efficiency and root growth, indicating that GPX1 could be important to salt tolerance. Growth reduction of GPX1s line might be related to photosynthesis impairment, which in turn could have involved a cross talk mechanism between mitochondria and chloroplast originated from redox changes due to GPX1 deficiency.


Subject(s)
Gene Silencing , Glutathione Peroxidase/metabolism , Mitochondria/metabolism , Oryza/physiology , Photosynthesis , Plant Proteins/metabolism , Salinity , Biomass , Cell Membrane/drug effects , Cell Membrane/metabolism , Cell Membrane/radiation effects , Gases/metabolism , Gene Silencing/drug effects , Gene Silencing/radiation effects , Glutathione/metabolism , Hydrogen Peroxide/metabolism , Light , Lipid Peroxidation/drug effects , Lipid Peroxidation/radiation effects , Mitochondria/drug effects , Mitochondria/radiation effects , Oryza/drug effects , Oryza/radiation effects , Oxidative Stress/drug effects , Oxidative Stress/radiation effects , Phenotype , Photosynthesis/drug effects , Photosynthesis/radiation effects , Plant Leaves/drug effects , Plant Leaves/metabolism , Plant Leaves/radiation effects , Plant Roots/drug effects , Plant Roots/metabolism , Plant Roots/radiation effects , Sodium Chloride/pharmacology , Stress, Physiological/drug effects , Stress, Physiological/radiation effects
14.
Angew Chem Int Ed Engl ; 55(6): 2152-6, 2016 Feb 05.
Article in English | MEDLINE | ID: mdl-26710264

ABSTRACT

Caged siRNAs with a single photolabile linker and/or vitamin E (vitE) modification at the 5' terminal were rationally designed and synthesized. These virtually inactive caged siRNAs were successfully used to photoregulate both firefly luciferase and GFP gene expression in cells with up to an 18.6-fold enhancement of gene silencing activity, which represents one of the best reported photomodulation of gene silencing efficiencies to date. siRNA tracking and vitE competition experiments indicated that the inactivity of vitE-modified siRNAs was not due to the bulky moiety of vitE; rather, the involvement of vitE-binding proteins has a large contribution to caged siRNA inactivation by preventing the dissociation of siRNA/lipo complexes and/or siRNA release. Further patterning experiments revealed the ability to spatially regulate gene expression through simple light irradiation.


Subject(s)
Gene Expression Regulation/drug effects , Gene Expression Regulation/radiation effects , Green Fluorescent Proteins/genetics , Luciferases, Firefly/genetics , RNA, Small Interfering/chemistry , RNA, Small Interfering/pharmacology , Vitamin E/chemistry , Vitamin E/pharmacology , Animals , Dose-Response Relationship, Drug , Fireflies , Gene Silencing/drug effects , Gene Silencing/radiation effects , Green Fluorescent Proteins/biosynthesis , Light , Luciferases, Firefly/biosynthesis , Molecular Structure , Structure-Activity Relationship
15.
Mol Plant Pathol ; 16(5): 484-94, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25220764

ABSTRACT

RNA silencing is a sequence-specific post-transcriptional gene inactivation mechanism that operates in diverse organisms and that can extend beyond its site of initiation, owing to the movement of the silencing signal, called non-autonomous gene silencing. Previous studies have shown that several factors manifest the movement of the silencing signal, such as the size (21 or 24 nucleotides) of the secondary small interfering RNA (siRNA) produced, the steady-state concentration of siRNAs and their cognate messenger RNA (mRNA) or a change in the sink-source status of plant parts affecting phloem translocation. Our study shows that both light intensity and temperature have a significant impact on the systemic movement of the silencing signal in transient agroinfiltration studies in Nicotiana benthamiana. At higher light intensities (≥ 450 µE/m(2)/s) and higher temperatures (≥ 30 °C), gene silencing was localized to leaf tissue that was infiltrated, without any systemic spread. Interestingly, in these light and temperature conditions (≥ 450 µE/m(2) /s and ≥ 30 °C), the N. benthamiana plants showed recovery from the viral symptoms. However, the reduced systemic silencing and reduced viral symptom severity at higher light intensities were caused by a change in the sink-source status of the plant, ultimately affecting the phloem translocation of small RNAs or the viral genome. In contrast, at lower light intensities (<300 µE/m(2)/s) with a constant temperature of 25 °C, there was strong systemic movement of the silencing signal in the N. benthamiana plants and reduced recovery from virus infections. The accumulation of gene-specific siRNAs was reduced at higher temperature as a result of a reduction in the accumulation of transcript on transient agroinfiltration of RNA interference (RNAi) constructs, mostly because of poor T-DNA transfer activity of Agrobacterium, possibly also accompanied by reduced phloem translocation.


Subject(s)
Agrobacterium/physiology , Gene Silencing/radiation effects , Light , Nicotiana/radiation effects , Nicotiana/virology , Temperature , DNA, Bacterial/genetics , DNA, Viral/genetics , Gene Transfer Techniques , Green Fluorescent Proteins/metabolism , Humidity , Mosaic Viruses/physiology , Phenotype , Phloem/radiation effects , Phloem/virology , Plant Diseases/virology , Plant Leaves/radiation effects , Plant Leaves/virology , Plants, Genetically Modified , RNA, Small Interfering/genetics , Nicotiana/genetics , Transgenes
16.
Adv Healthc Mater ; 4(5): 760-70, 2015 Apr 02.
Article in English | MEDLINE | ID: mdl-25530259

ABSTRACT

Controllable release is particularly important for the delivery of small interfering RNA (siRNA), as siRNAs have a high susceptibility to enzymatic degradation if release is premature, yet lack silencing activity if they remain inaccessible within the cytoplasm. To overcome these hurdles, novel and tailorable mPEG-b-poly(5-(3-(amino)propoxy)-2-nitrobenzyl methacrylate) (mPEG-b-P(APNBMA)) diblock copolymers containing light-sensitive o-nitrobenzyl moieties and pendant amines are employed to provide both efficient siRNA binding, via electrostatic and hydrophobic interactions, as well as triggered charge reversal and nucleic acid release. In particular, siRNA/mPEG-b-P(APNBMA)23.6 polyplexes show minimal aggregation in physiological salt and serum, and enhanced resistance to polyanion-induced unpackaging compared to polyethylenimine preparations. Cellular delivery of siRNA/mPEG-b-P(APNBMA)23.6 polyplexes reveals greater than 80% cellular transfection, as well as rapid and widespread cytoplasmic distribution. Additionally, UV irradiation indicates ≈70% reduction in targeted gene expression following siRNA/mPEG-b-P(APNBMA)23.6 polyplex treatment, as compared to 0% reduction in polyplex-treated cells without UV irradiation, and only ≈30% reduction for Lipofectamine-treated cells. The results here highlight the potential of these light-sensitive copolymers with a well-defined on/off switch for applications including cellular patterning for guided cell growth and extension, and cellular microarrays for exploring protein and drug interactions that require enhanced spatiotemporal control of gene activation.


Subject(s)
Drug Carriers/radiation effects , Gene Silencing/radiation effects , Polyethylene Glycols/chemistry , RNA, Small Interfering/pharmacokinetics , Animals , Cell Line, Tumor , Cell Survival/drug effects , Drug Carriers/chemistry , Humans , Mice , NIH 3T3 Cells , RNA, Small Interfering/chemistry , RNA, Small Interfering/genetics , RNA, Small Interfering/pharmacology
17.
PLoS One ; 9(10): e109572, 2014.
Article in English | MEDLINE | ID: mdl-25329931

ABSTRACT

Androgenesis is a form of uniparental reproduction leading to progenies inheriting only the paternal set of chromosomes. It has been achieved with variable success in a number of freshwater species and can be attained by artificial fertilization of genetically inactivated eggs following exposure to gamma (γ), X-ray or UV irradiation (haploid androgenesis) and by restoration of diploidy by suppression of mitosis using a pressure or thermal shock. The conditions for the genetic inactivation of the maternal genome in the European sea bass (Dicentrarchus labrax L.) were explored using different combinations of UV irradiation levels and durations. UV treatments significantly affected embryo survival and generated a wide range of developmental abnormalities. Despite the wide range of UV doses tested (from 7.2 to 720 mJ x cm(-2)), only one dose (60 mJ x cm(-2) x min(-1) with 1 min irradiation) resulted in a small percentage (14%) of haploid larvae at hatching in the initial trials as verified by flow cytometry. Microsatellite marker analyses of three further batches of larvae produced by using this UV treatment showed a majority of larvae with variable levels of paternal and maternal contributions and only one larva displaying pure paternal inheritance. The results are discussed also in the context of an assessment of the UV-absorbance characteristics of egg extracts in this species that revealed the presence of gadusol, a compound structurally related to mycosporine-like amino acids (MAAs) with known UV-screening properties.


Subject(s)
Bass/genetics , Gene Silencing/radiation effects , Ovum/metabolism , Ovum/radiation effects , Ultraviolet Rays , Animals , Bass/embryology , Diploidy , Embryo, Nonmammalian/physiology , Embryo, Nonmammalian/radiation effects , Larva/radiation effects , Microsatellite Repeats/genetics , Ploidies , Survival Analysis
18.
Cell Death Dis ; 5: e1461, 2014 Oct 16.
Article in English | MEDLINE | ID: mdl-25321468

ABSTRACT

Radiotherapy has the widest application to esophageal squamous cell carcinoma (ESCC) patients. Factors associated with DNA damage repair have been shown to function in cell radiosensitivity. Human positive cofactor 4 (PC4) has a role in nonhomologous end joining (NHEJ) and is involved in DNA damage repair. However, the clinical significance and biological role of PC4 in cancer progression and cancer cellular responses to chemoradiotherapy (CRT) remain largely unknown. The aim of the present study was to investigate the potential roles of PC4 in the radiosensitivity of ESCC. In this study, we showed that knockdown of PC4 substantially increased ESCC cell sensitivity to ionizing radiation (IR) both in vitro and in vivo and enhanced radiation-induced apoptosis and mitotic catastrophe (MC). Importantly, we demonstrated that silencing of PC4 suppressed NHEJ by downregulating the expression of XLF in ESCC cells, whereas reconstituting the expression of XLF protein in the PC4-knockdown ESCC cells restored NHEJ activity and radioresistance. Moreover, high expression of PC4 positively correlated with ESCC resistance to CRT and was an independent predictor for short disease-specific survival of ESCC patients in both of our cohorts. These findings suggest that PC4 protects ESCC cells from IR-induced death by enhancing the NHEJ-promoting activity of XLF and could be used as a novel radiosensitivity predictor and a promising therapeutic target for ESCCs.


Subject(s)
Carcinoma, Squamous Cell/metabolism , Carcinoma, Squamous Cell/pathology , DNA End-Joining Repair , DNA Repair Enzymes/metabolism , DNA-Binding Proteins/antagonists & inhibitors , DNA-Binding Proteins/metabolism , Esophageal Neoplasms/metabolism , Esophageal Neoplasms/pathology , Radiation Tolerance , Transcription Factors/antagonists & inhibitors , Apoptosis/radiation effects , Cell Line, Tumor , DNA Breaks, Double-Stranded/radiation effects , DNA End-Joining Repair/radiation effects , Down-Regulation/radiation effects , Esophageal Squamous Cell Carcinoma , Female , Gene Silencing/radiation effects , Humans , Immunohistochemistry , Male , Middle Aged , Mitosis/radiation effects , Multivariate Analysis , Proportional Hazards Models , Radiation Tolerance/radiation effects , Radiation, Ionizing , Transcription Factors/metabolism , Xenograft Model Antitumor Assays
19.
PLoS One ; 9(4): e92712, 2014.
Article in English | MEDLINE | ID: mdl-24718257

ABSTRACT

Apoptosis is a regulated cellular suicide program that is critical for the development and maintenance of healthy tissues. Previous studies have shown that small kinetochore associated protein (SKAP) cooperates with kinetochore and mitotic spindle proteins to regulate mitosis. However, the role of SKAP in apoptosis has not been investigated. We have identified a new interaction involving SKAP, and we propose a mechanism through which SKAP regulates cell apoptosis. Our experiments demonstrate that both overexpression and knockdown of SKAP sensitize cells to UV-induced apoptosis. Further study has revealed that SKAP interacts with Pre-mRNA processing Factor 19 (Prp19). We find that UV-induced apoptosis can be inhibited by ectopic expression of Prp19, whereas silencing Prp19 has the opposite effect. Additionally, SKAP negatively regulates the protein levels of Prp19, whereas Prp19 does not alter SKAP expression. Finally, rescue experiments demonstrate that the pro-apoptotic role of SKAP is executed through Prp19. Taken together, these findings suggest that SKAP promotes UV-induced cell apoptosis by negatively regulating the anti-apoptotic protein Prp19.


Subject(s)
Apoptosis/radiation effects , Cell Cycle Proteins/metabolism , DNA Repair Enzymes/genetics , Microtubule-Associated Proteins/metabolism , Nuclear Proteins/genetics , Ultraviolet Rays , Amino Acid Sequence , Cell Cycle Proteins/chemistry , Cell Line , Chromatography, Affinity , Conserved Sequence , DNA Repair Enzymes/metabolism , Evolution, Molecular , Gene Knockdown Techniques , Gene Silencing/radiation effects , Humans , Mass Spectrometry , Microtubule-Associated Proteins/chemistry , Molecular Sequence Data , Nuclear Proteins/metabolism , Protein Binding/radiation effects , RNA Splicing Factors
20.
J Cell Physiol ; 229(11): 1863-73, 2014 Nov.
Article in English | MEDLINE | ID: mdl-24691646

ABSTRACT

Glioblastoma (GBM) remains the most aggressive and lethal brain tumor due to its molecular heterogeneity and high motility and invasion capabilities of its cells, resulting in high resistance to current standard treatments (surgery, followed by ionizing radiation combined with Temozolomide chemotherapy administration). Locus amplification, gene overexpression, and genetic mutations of epidermal growth factor receptor (EGFR) are hallmarks of GBM that can ectopically activate downstream signaling oncogenic cascades such as PI3K/Akt/mTOR pathway. Importantly, alteration of this pathway, involved also in the regulation of autophagy process, can improve radioresistance in GBM cells, thus promoting the aggressive phenotype of this tumor. In this work, the endogenous EGFR expression profile and autophagy were modulated to increase radiosensitivity behavior of human T98G and U373MG GBM cells. Our results primarily indicated that EGFR interfering induced radiosensitivity according to a decrease of the clonogenic capability of the investigated cells, and an effective reduction of the in vitro migratory features. Moreover, EGFR interfering resulted in an increase of Temozolomide (TMZ) cytotoxicity in T98G TMZ-resistant cells. In order to elucidate the involvement of the autophagy process as pro-death or pro-survival role in cells subjected to EGFR interfering, the key autophagic gene ATG7 was silenced, thereby producing a transient block of the autophagy process. This autophagy inhibition rescued clonogenic capability of irradiated and EGFR-silenced T98G cells, suggesting a pro-death autophagy contribution. To further confirm the functional interplay between EGFR and autophagy pathways, Rapamycin-mediated autophagy induction during EGFR modulation promoted further impairment of irradiated cells, in terms of clonogenic and migration capabilities. Taken together, these results might suggest a novel combined EGFR-autophagy modulation strategy, to overcome intrinsic GBM radioresistance, thus improving the efficacy of standard treatments. J. Cell. Physiol. 229: 1863-1873, 2014. © 2014 Wiley Periodicals, Inc.


Subject(s)
Autophagy , Brain Neoplasms/pathology , Cell Movement , ErbB Receptors/metabolism , Glioblastoma/metabolism , Glioblastoma/pathology , Radiation Tolerance , Autophagy/drug effects , Autophagy/radiation effects , Autophagy-Related Protein 7 , Brain Neoplasms/metabolism , Cell Line, Tumor , Cell Movement/drug effects , Cell Movement/radiation effects , Clone Cells , Dacarbazine/analogs & derivatives , Dacarbazine/pharmacology , Drug Resistance, Neoplasm/drug effects , Gene Silencing/drug effects , Gene Silencing/radiation effects , Humans , RNA, Small Interfering/metabolism , Radiation Tolerance/drug effects , Radiation Tolerance/radiation effects , Radiation, Ionizing , Sirolimus/pharmacology , Temozolomide , Transfection , Ubiquitin-Activating Enzymes/genetics , Ubiquitin-Activating Enzymes/metabolism
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