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1.
Sci Rep ; 12(1): 2507, 2022 02 21.
Article in English | MEDLINE | ID: mdl-35190596

ABSTRACT

Genetic testing for cancer predisposition has been curtailed by the cost of sequencing, and testing has been restricted by eligibility criteria. As the cost of sequencing decreases, the question of expanding multi-gene cancer panels to a broader population arises. We evaluated how many additional actionable genetic variants are returned by unrestricted panel testing in the private sector compared to those which would be returned by adhering to current NHS eligibility criteria. We reviewed 152 patients referred for multi-gene cancer panels in the private sector between 2014 and 2016. Genetic counselling and disclosure of all results was standard of care provided by the Consultant. Every panel conducted was compared to current eligibility criteria. A germline pathogenic / likely pathogenic variant (P/LP), in a gene relevant to the personal or family history of cancer, was detected in 15 patients (detection rate of 10%). 46.7% of those found to have the P/LP variants (7 of 15), or 4.6% of the entire set (7 of 152), did not fulfil NHS eligibility criteria. 46.7% of P/LP variants in this study would have been missed by national testing guidelines, all of which were actionable. However, patients who do not fulfil eligibility criteria have a higher Variant of Uncertain Significance (VUS) burden. We demonstrated that the current England NHS threshold for genetic testing is missing pathogenic variants which would alter management in 4.6%, nearly 1 in 20 individuals. However, the clinical service burden that would ensue is a detection of VUS of 34%.


Subject(s)
Biomarkers, Tumor/genetics , Genetic Counseling/standards , Genetic Testing/standards , Neoplasms/epidemiology , State Medicine/standards , Adolescent , Adult , Aged , Aged, 80 and over , England/epidemiology , Female , Genetic Counseling/statistics & numerical data , Genetic Predisposition to Disease , Genetic Testing/statistics & numerical data , Germ-Line Mutation , Humans , Incidence , Male , Middle Aged , Neoplasms/diagnosis , Neoplasms/genetics , Retrospective Studies , Risk Assessment/standards , Risk Assessment/statistics & numerical data , Young Adult
2.
Am J Surg ; 223(1): 94-100, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34325908

ABSTRACT

INTRODUCTION: Lobular carcinoma in situ (LCIS), atypical ductal and lobular hyperplasia (AH) increase breast cancer risk. We examined risk management recommendations (RMR) and acceptance in AH/LCIS. METHODS: All patients with AH/LCIS on core needle biopsy from 2013 to 2016 at our institution were identified; cancer patients were excluded. Univariate and multivariate analysis examined factors associated with management. RESULTS: 98 % of patients were evaluated by breast surgeons and 53 % underwent risk model calculation (RC). 77 % had new RMR. RMR of MRI screening (MRI), genetic counselling (GC) and medical oncology (MO) referral were 41 %, 18 %, 77 %, respectively. MRI screening was more likely recommended in those with strong family history (p = 0.01), and high RC (p < 0.001). Uptake of at least one RMR did not occur in 84 % of patients. Use of RC correlated with MO acceptance (p = 0.049). CONCLUSIONS: Diagnosis of atypia has the potential to change risk management for most, however only 16 % of patients accepted all RMR.


Subject(s)
Breast Carcinoma In Situ/diagnosis , Breast Neoplasms/prevention & control , Breast/pathology , Patient Acceptance of Health Care/statistics & numerical data , Risk Reduction Behavior , Adult , Breast/diagnostic imaging , Breast/surgery , Breast Carcinoma In Situ/epidemiology , Breast Carcinoma In Situ/pathology , Breast Carcinoma In Situ/therapy , Breast Neoplasms/epidemiology , Breast Neoplasms/pathology , Female , Genetic Counseling/statistics & numerical data , Humans , Hyperplasia/diagnosis , Hyperplasia/epidemiology , Hyperplasia/pathology , Hyperplasia/therapy , Magnetic Resonance Imaging/statistics & numerical data , Mass Screening/statistics & numerical data , Middle Aged , Risk Assessment/statistics & numerical data
3.
Eur J Hum Genet ; 30(1): 73-80, 2022 01.
Article in English | MEDLINE | ID: mdl-34121090

ABSTRACT

The government-funded 'Punjab Thalassaemia Prevention Project' (PTPP) in Pakistan includes cascade screening for biological relatives of children with beta-Thalassaemia Major (ß-TM). However, there is low uptake of cascade screening. This paper presents the (i) development of a paper-based 'decision support intervention for relatives' (DeSIRe) to enable PTPP Field Officers to facilitate informed decision making about carrier testing, and (ii) assessment of the feasibility and acceptability of the DeSIRe. The intervention was developed using the International Patient Decision Aids Standards quality criteria and Ottawa Decision Support Framework. Twelve focus groups were conducted (September and October 2020) to explore the views of healthcare professionals (HCPs) and relatives of children with ß-TM, in six cities. The focus groups were attended by 117 participants (60 HCPs and 57 relatives). Thematic analysis showed that the DeSIRe was considered acceptable for supporting relatives to make informed decisions about cascade screening, and potentially feasible for use in clinical practice. Suggestions for changing some words, the structure and adding information about how carrier testing relates to consanguineous marriages will enable further development of the DeSIRe. Participants generally welcomed the DeSIRe; however, they highlighted the perceived need to use more directive language, hence showed a cultural preference for directive genetic counselling. The findings highlight challenges for researchers using western theories, frameworks, policies and clinical guidelines to develop decision support interventions for implementation more globally. Future research is needed to evaluate the use of the DeSIRe in routine practice and whether it enables relatives to make informed decisions.


Subject(s)
Decision Making, Shared , Genetic Carrier Screening/statistics & numerical data , Patient Acceptance of Health Care , beta-Thalassemia/genetics , Adult , Family/psychology , Female , Genetic Counseling/psychology , Genetic Counseling/statistics & numerical data , Humans , Male , Middle Aged , Pakistan , Social Support , beta-Thalassemia/diagnosis , beta-Thalassemia/psychology
4.
Sci Rep ; 11(1): 19099, 2021 09 27.
Article in English | MEDLINE | ID: mdl-34580403

ABSTRACT

Exome sequencing (ES) is an important diagnostic tool for individuals with neurodevelopmental disorders (NDD) and/or multiple congenital anomalies (MCA). However, the cost of ES limits the test's accessibility for many patients. We evaluated the yield of publicly funded clinical ES, performed at a tertiary center in Israel, over a 3-year period (2018-2020). Probands presented with (1) moderate-to-profound global developmental delay (GDD)/intellectual disability (ID); or (2) mild GDD/ID with epilepsy or congenital anomaly; and/or (3) MCA. Subjects with normal chromosomal microarray analysis who met inclusion criteria were included, totaling 280 consecutive cases. Trio ES (proband and parents) was the default option. In 252 cases (90.0%), indication of NDD was noted. Most probands were males (62.9%), and their mean age at ES submission was 9.3 years (range 1 month to 51 years). Molecular diagnosis was reached in 109 probands (38.9%), mainly due to de novo variants (91/109, 83.5%). Disease-causing variants were identified in 92 genes, 15 of which were implicated in more than a single case. Male sex, families with multiple-affected members and premature birth were significantly associated with lower ES yield (p < 0.05). Other factors, including MCA and coexistence of epilepsy, autism spectrum disorder, microcephaly or abnormal brain magnetic resonance imaging findings, were not associated with the yield. To conclude, our findings support the utility of clinical ES in a real-world setting, as part of a publicly funded genetic workup for individuals with GDD/ID and/or MCA.


Subject(s)
Abnormalities, Multiple/diagnosis , Exome Sequencing/economics , Financing, Government , Genetic Testing/economics , Neurodevelopmental Disorders/diagnosis , Abnormalities, Multiple/economics , Abnormalities, Multiple/genetics , Adolescent , Adult , Child , Child, Preschool , Cost-Benefit Analysis , Feasibility Studies , Female , Genetic Counseling/economics , Genetic Counseling/methods , Genetic Counseling/statistics & numerical data , Genetic Testing/methods , Genetic Testing/statistics & numerical data , Humans , Infant , Infant, Newborn , Israel , Male , Maternal Age , Neurodevelopmental Disorders/economics , Neurodevelopmental Disorders/genetics , Paternal Age , Pregnancy , Prenatal Diagnosis/economics , Prenatal Diagnosis/methods , Program Evaluation , Retrospective Studies , Tertiary Care Centers/economics , Tertiary Care Centers/statistics & numerical data , Exome Sequencing/statistics & numerical data , Young Adult
5.
Prenat Diagn ; 41(11): 1460-1466, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34426984

ABSTRACT

OBJECTIVE: Preconception and prenatal carrier screening is designed to provide reproductive risk information, but carriers for some autosomal recessive or X-linked conditions also have personal health risks. This study investigated the prevalence of and inclusion of personal health implications in pre- and post-test counseling. METHODS: Twelve genetic conditions with personal health risks for carriers included on carrier screening panels but not otherwise screened routinely were identified (e.g., Gaucher disease with Parkinson's disease risk). A retrospective review was performed of patients with a positive carrier screen for one of these conditions at our center from 2012 to 2019. RESULTS: Of 6147 individuals that had carrier screening for one of the twelve conditions, 96 (1.56%) did not report a known family history and screened positive for one of the conditions. Testing was ordered largely by reproductive endocrinologists (51.0%) and genetic counselors (35.4%). Most individuals did not receive pre- (96.8%) or post-test (64.6%) counseling about personal health risks. Post-test counseling was performed principally by genetic counselors (97.1%). For carriers of conditions with guidelines for specialist referral, most individuals (75.9%) were referred. CONCLUSION: Expanded genetic carrier screening increasingly identifies individuals with personal health implications, but patients are frequently not counseled before or after testing. These findings stress the importance of developing guidelines for practitioners about expanded carrier screening counseling and follow-up.


Subject(s)
Genetic Carrier Screening/methods , Genetic Counseling/methods , Prenatal Diagnosis/methods , Adult , Female , Genetic Carrier Screening/statistics & numerical data , Genetic Counseling/psychology , Genetic Counseling/statistics & numerical data , Humans , Male , Pregnancy , Prenatal Diagnosis/psychology , Prenatal Diagnosis/statistics & numerical data , Retrospective Studies
6.
Sci Rep ; 11(1): 12491, 2021 06 14.
Article in English | MEDLINE | ID: mdl-34127761

ABSTRACT

Changing practice guidelines and recommendations have important implications for cancer survivors. This study investigated genetic testing patterns and outcomes and reported family history of pancreatic cancer (FHPC) in a large registry population of breast cancer (BC) patients. Variables including clinical and demographic characteristics, FHPC in a first or second-degree relative, and genetic testing outcomes were analyzed for BC patients diagnosed between 2010 and 2018 in the NYU Langone Health Breast Cancer Database. Among 3334 BC patients, 232 (7%) had a positive FHPC. BC patients with FHPC were 1.68 times more likely to have undergone genetic testing (p < 0.001), but 33% had testing for BRCA1/2 only and 44% had no genetic testing. Pathogenic germline variants (PGV) were identified in 15/129 (11.6%) BC patients with FHPC, and in 145/1315 (11.0%) BC patients without FHPC. Across both groups, updates in genetic testing criteria and recommendations could impact up to 80% of this cohort. Within a contemporary cohort of BC patients, 7% had a positive FHPC. The majority of these patients (56%) had no genetic testing, or incomplete testing by current standards, suggesting under-diagnosis of PC risk. This study supports recommendations for survivorship care that incorporate ongoing genetic risk assessment and counseling.


Subject(s)
Breast Neoplasms, Male/mortality , Breast Neoplasms/mortality , Genetic Testing/standards , Pancreatic Neoplasms/diagnosis , Practice Guidelines as Topic , Adult , Aged , Aged, 80 and over , BRCA1 Protein/genetics , BRCA2 Protein/genetics , Breast Neoplasms/genetics , Breast Neoplasms/therapy , Breast Neoplasms, Male/genetics , Breast Neoplasms, Male/therapy , Cancer Survivors/statistics & numerical data , Early Detection of Cancer/methods , Early Detection of Cancer/standards , Early Detection of Cancer/statistics & numerical data , Female , Genetic Counseling/standards , Genetic Counseling/statistics & numerical data , Genetic Predisposition to Disease , Genetic Testing/statistics & numerical data , Humans , Longitudinal Studies , Male , Medical History Taking/statistics & numerical data , Middle Aged , Mutation , Neoplasm Recurrence, Local/diagnosis , Neoplasm Recurrence, Local/genetics , Neoplasm Recurrence, Local/prevention & control , Pancreatic Neoplasms/genetics , Pancreatic Neoplasms/prevention & control , Registries/statistics & numerical data , Survivorship
7.
Cancer Med ; 10(13): 4532-4541, 2021 07.
Article in English | MEDLINE | ID: mdl-34102012

ABSTRACT

PURPOSE: To examine the benefit of telehealth over current delivery options in oncology practices without genetic counselors. METHODS: Participants meeting cancer genetic testing guidelines were recruited to this multi-center, randomized trial comparing uptake of genetic services with remote services (telephone or videoconference) to usual care in six predominantly community practices without genetic counselors. The primary outcome was the composite uptake of genetic counseling or testing. Secondary outcomes compare telephone versus videoconference services. RESULTS: 147 participants enrolled and 119 were randomized. Eighty percent of participants in the telehealth arm had genetic services as compared to 16% in the usual care arm (OR 30.52, p < 0.001). Five genetic mutation carriers (6.7%) were identified in the telehealth arm, compared to none in the usual care arm. In secondary analyses, factors associated with uptake were lower anxiety (6.77 vs. 8.07, p = 0.04) and lower depression (3.38 vs. 5.06, p = 0.04) among those who had genetic services. There were no significant differences in change in cognitive or affective outcomes immediately post-counseling and at 6 and 12 months between telephone and videoconference arms. CONCLUSION: Telehealth increases uptake of genetic counseling and testing at oncology practices without genetic counselors and could significantly improve identification of genetic carriers and cancer prevention outcomes.


Subject(s)
Genetic Services/statistics & numerical data , Medical Oncology/statistics & numerical data , Telemedicine/statistics & numerical data , Anxiety/epidemiology , Counselors , Depression/epidemiology , Female , Genetic Carrier Screening/statistics & numerical data , Genetic Counseling/statistics & numerical data , Genetic Testing/statistics & numerical data , Humans , Male , Middle Aged , Mutation Rate , Socioeconomic Factors , Telemedicine/methods , Telephone/statistics & numerical data , Time Factors , Videoconferencing/statistics & numerical data
8.
BMC Cancer ; 21(1): 665, 2021 Jun 03.
Article in English | MEDLINE | ID: mdl-34082720

ABSTRACT

BACKGROUND: An important number of breast and ovarian cancer cases is due to a strong genetic predisposition. The main tool for identifying individuals at risk is recognizing a suggestive family history of cancer. We present a prospective study on applying three selected clinical guidelines to a cohort of 1000 Slovenian women to determine the prevalence of at-risk women according to each of the guidelines and analyze the differences amongst the guidelines. METHODS: Personal and family history of cancer was collected for 1000 Slovenian women. Guidelines by three organizations: National Comprehensive Cancer Network (NCCN), American College of Medical Genetics in cooperation with National Society of Genetic Counselors (ACMG/NSGC), and Society of Gynecologic Oncology (SGO) were applied to the cohort. The number of women identified, the characteristics of the high-risk population, and the agreement between the guidelines were explored. RESULTS: NCCN guidelines identify 13.2% of women, ACMG/NSGC guidelines identify 7.1% of women, and SGO guidelines identify 7.0% of women from the Slovenian population, while 6.2% of women are identified by all three guidelines as having high-risk for hereditary breast and ovarian cancer. CONCLUSIONS: We identified 13.7% of women from the Slovenian population as being at an increased risk for breast and ovarian cancer based on their personal and family history of cancer using all of the guidelines. There are important differences between the guidelines. NCCN guidelines are the most inclusive, identifying nearly twice the amount of women as high-risk for hereditary breast and ovarian cancer as compared to the AGMG/NSCG and SGO guidelines in the Slovenian population.


Subject(s)
Early Detection of Cancer/standards , Genetic Counseling/standards , Genetic Testing/standards , Hereditary Breast and Ovarian Cancer Syndrome/epidemiology , Practice Guidelines as Topic , Referral and Consultation/standards , Adolescent , Adult , Early Detection of Cancer/statistics & numerical data , Female , Genetic Counseling/statistics & numerical data , Genetic Predisposition to Disease , Genetic Testing/statistics & numerical data , Hereditary Breast and Ovarian Cancer Syndrome/diagnosis , Hereditary Breast and Ovarian Cancer Syndrome/genetics , Humans , Middle Aged , Prevalence , Prospective Studies , Referral and Consultation/statistics & numerical data , Risk Assessment/methods , Risk Assessment/standards , Risk Assessment/statistics & numerical data , Slovenia/epidemiology , Young Adult
9.
PLoS One ; 16(5): e0250379, 2021.
Article in English | MEDLINE | ID: mdl-34010335

ABSTRACT

BACKGROUND: Integration of genetic testing into routine oncology care could improve access to testing. This systematic review investigated interventions and the tailored implementation strategies aimed at increasing access to genetic counselling and testing and identifying hereditary cancer in oncology. METHODS: The search strategy results were reported using the PRISMA statement and four electronic databases were searched. Eligible studies included routine genetic testing for breast and ovarian cancer or uptake after universal tumour screening for colorectal or endometrial cancer. The titles and abstracts were reviewed and the full text articles screened for eligibility. Data extraction was preformed using a designed template and study appraisal was assessed using an adapted Newcastle Ottawa Scale. Extracted data were mapped to Proctor's et al outcomes and the Consolidated Framework for Implementation Research and qualitatively synthesised. RESULTS: Twenty-seven studies, published up to May 2020, met the inclusion criteria. Twenty-five studies ranged from poor (72%), fair to good (28%) quality. Most interventions identified were complex (multiple components) such as; patient or health professional education, interdisciplinary practice and a documentation or system change. Forty-eight percent of studies with complex interventions demonstrated on average a 35% increase in access to genetic counselling and a 15% increase in testing completion. Mapping of study outcomes showed that 70% and 32% of the studies aligned with either the service and client or the implementation level outcome and 96% to the process or inner setting domains of the Consolidated Framework for Implementation Research. CONCLUSION: Existing evidence suggests that complex interventions have a potentially positive effect towards genetic counselling and testing completion rates in oncology services. Studies of sound methodological quality that explore a greater breadth of pre and post implementation outcomes and informed by theory are needed. Such research could inform future service delivery models for the integration of genetics into oncology services.


Subject(s)
Colorectal Neoplasms/diagnosis , Endometrial Neoplasms/diagnosis , Genetic Testing/standards , Implementation Science , Colorectal Neoplasms/genetics , Endometrial Neoplasms/genetics , Facilities and Services Utilization/trends , Female , Genetic Counseling/standards , Genetic Counseling/statistics & numerical data , Genetic Testing/statistics & numerical data , Humans , Male
10.
Prostate ; 81(11): 754-764, 2021 08.
Article in English | MEDLINE | ID: mdl-34057231

ABSTRACT

BACKGROUND: Genetic counseling and germline testing have an increasingly important role for patients with prostate cancer (PCa); however, recent data suggests they are underutilized. Our objective was to perform a qualitative study of the barriers and facilitators of germline genetic evaluation among physicians who manage PCa. METHODS: We conducted semi-structured interviews with medical oncologists, radiation oncologists, and urologists from different U.S. practice settings until thematic saturation was achieved at n = 14. The interview guide was based on the Tailored Implementation in Chronic Diseases Framework to identify key determinants of practice. Interview transcripts were independently coded by ≥2 investigators using a constant comparative method. RESULTS: The decision to perform or refer for germline genetic evaluation is affected by factors at multiple levels. Although patient factors sometimes play a role, the dominant themes in the decision to conduct germline genetic evaluation were at the physician and organizational level. Physician knowledge, coordination of care, perceptions of the guidelines, and concerns about cost were most frequently discussed as the main factors affecting utilization of germline genetic evaluation. CONCLUSIONS: There are currently numerous barriers to implementation of germline genetic evaluation for PCa. Efforts to expand physician education, to develop tools to enhance genetics in practice, and to facilitate coordination of care surrounding genetic evaluation are important to promote guideline-concordant care.


Subject(s)
Genetic Counseling/statistics & numerical data , Genetic Testing/statistics & numerical data , Germ-Line Mutation/genetics , Prostatic Neoplasms/genetics , Adult , Attitude of Health Personnel , Humans , Male , Middle Aged , Oncologists , Physician's Role , Practice Guidelines as Topic , Qualitative Research , Radiation Oncologists , Urologists
11.
Gynecol Oncol ; 162(2): 506-516, 2021 08.
Article in English | MEDLINE | ID: mdl-34023131

ABSTRACT

PURPOSE: Several professional organizations recommend universal genetic assessment for people with ovarian cancer as identifying pathogenic variants can affect treatment, prognosis, and all-cause mortality for patients and relatives. We sought to evaluate the literature on genetic assessment for women with ovarian cancer and determine if any interventions or patient characteristics drive utilization of services. METHODS: We searched key electronic databases to identify trials that evaluated genetic assessment for people with ovarian cancer. Trials with the primary aim to evaluate utilization of genetic assessment with or without interventions were included. Eligible trials were subjected to meta-analysis and the moderating influence of health interventions on rates of genetic assessment were examined. RESULTS: A total of 35 studies were included (19 report on utilization of genetic services without an intervention, 7 with an intervention, and 9 with both scenarios). Without an intervention, pooled estimates for referral to genetic counseling and completion of genetic testing were 39% [CI 27-53%] and 30% [CI 19-44%]. Clinician-facilitated interventions included: mainstreaming of genetic services (99% [CI 86-100%]), telemedicine (75% [CI 43-93%]), clinic-embedded genetic counselor (76% [CI 32-95%]), reflex tumor somatic genetic assessment (64% [CI 17-94%]), universal testing (57% [28-82%]), and referral forms (26% [CI 10-53%]). Random-effects pooled proportions demonstrated that Black vs. White race was associated with a lower rate of genetic testing (26%[CI 17-38%] vs. 40% [CI 25-57%]) as was being un-insured vs. insured (23% [CI 18-28%] vs. 38% [CI 26-53%]). CONCLUSIONS: Reported rates of genetic testing for people with ovarian cancer remain well below the goal of universal testing. Interventions such as mainstreaming can improve testing uptake. Strategies aimed at improving utilization of genetic services should consider existing disparities in race and insurance status.


Subject(s)
Early Detection of Cancer/statistics & numerical data , Genetic Counseling/organization & administration , Genetic Testing/statistics & numerical data , Ovarian Neoplasms/diagnosis , Referral and Consultation/organization & administration , BRCA1 Protein/genetics , BRCA2 Protein/genetics , DNA Mutational Analysis/statistics & numerical data , Female , Genetic Counseling/statistics & numerical data , Humans , Ovarian Neoplasms/genetics , Ovarian Neoplasms/prevention & control , Referral and Consultation/statistics & numerical data , Telemedicine/organization & administration , Telemedicine/statistics & numerical data
12.
Mayo Clin Proc ; 96(6): 1407-1417, 2021 06.
Article in English | MEDLINE | ID: mdl-33890576

ABSTRACT

OBJECTIVE: To assess the presence of clinically actionable results and other genetic findings in an otherwise healthy population of adults seen in a medical practice setting and offered "predictive" genomic testing. PATIENTS AND METHODS: In 2014, a predictive genomics clinic for generally healthy adults was launched through the Mayo Clinic Executive Health Program. Self-identified interested patients met with a genomic nurse and genetic counselor for pretest advice and education. Two genome sequencing platforms and one gene panel-based health screen were offered. Posttest genetic counseling was available for patients who elected testing. From March 1, 2014, through June 1, 2019, 1281 patients were seen and 301 (23.5%) chose testing. Uptake rates increased to 36.3% [70 of 193]) in 2019 from 11.8% [2 of 17] in 2014. Clinically actionable results and genetic findings were analyzed using descriptive statistics. RESULTS: Clinically actionable results were detected in 11.6% of patients (35 of 301), and of those, 51.7% (15 of 29) with a cancer or cardiovascular result = did not have a personal or family history concerning for a hereditary disorder. The most common actionable results were in the BCHE, BRCA2, CHEK2, LDLR, MUTYH, and MYH7 genes. A carrier of at least one recessive condition was found in 53.8% of patients (162 of 301). At least one variant associated with multifactorial disease was found in 44.5% (134 of 301) (eg, 25 patients were heterozygous for the F5 factor V Leiden variant associated with thrombophilia risk). CONCLUSION: Our predictive screening revealed that 11.6% of individuals will test positive for a clinically actionable, likely pathogenic/pathogenic variant. This finding suggests that wider knowledge and adoption of predictive genomic services could be beneficial in medical practice, although additional studies are needed.


Subject(s)
Genetic Testing , Female , Genetic Counseling/methods , Genetic Counseling/statistics & numerical data , Genetic Diseases, Inborn/diagnosis , Genetic Diseases, Inborn/therapy , Genetic Predisposition to Disease/epidemiology , Genetic Predisposition to Disease/genetics , Genetic Testing/methods , Genetic Testing/statistics & numerical data , Heterozygote , Humans , Male , Middle Aged , Retrospective Studies
13.
Am J Surg ; 221(6): 1159-1163, 2021 06.
Article in English | MEDLINE | ID: mdl-33849710

ABSTRACT

INTRODUCTION: The use of restricted versus expanded panel genetic testing in breast cancer is controversial, with some institutions offering predominantly abbreviated gene panel testing. Our community program has offered larger panel testing for several years. We sought to evaluate the outcomes of large panel genetic testing and understand their impact on patient care. METHODS: A retrospective review of our multi-institutional tumor registry was performed from 2015 to 2018 for patients undergoing surgery for breast cancer. Referral to genetic counseling and outcomes of panel testing were examined. RESULTS: 2237 patients met study criteria. Median age was 63 years (range 22-99). Eight hundred and thirty-eight patients (37.4%) were referred for genetic counseling. Of these patients, 509 (60.7%) had negative results, 108 (12.8%) had deleterious mutations (37 not included in abbreviated panels), and 221 (26.3%) had variants of undetermined significance (VUS). Bilateral mastectomy rates for patients with deleterious mutations were 53.7%, versus 31% for negative and 32.6% for VUS. DISCUSSION: Large panel testing finds a significant number of actionable mutations. The increased identification of VUS did not result in higher mastectomy rates.


Subject(s)
Breast Neoplasms/genetics , Genetic Testing , Mastectomy/statistics & numerical data , Academies and Institutes , Adult , Aged , Aged, 80 and over , Breast Neoplasms/surgery , Community Health Services , Female , Genetic Counseling/methods , Genetic Counseling/statistics & numerical data , Genetic Markers/genetics , Genetic Predisposition to Disease/genetics , Genetic Testing/methods , Humans , Middle Aged , Mutation/genetics , Registries , Retrospective Studies , Treatment Outcome , Young Adult
14.
Rev Med Inst Mex Seguro Soc ; 59(1): 101-105, 2021 02 02.
Article in Spanish | MEDLINE | ID: mdl-33667050

ABSTRACT

Genetic counseling is the process of advising indivduals, partners and families affected by or at risk of genetic disorders to help them understand and adapt to the medical, psychological, social, family and reproductive implications of a genetic condition. Given the expansion of precision medicine and the recent increase in the use of molecular diagnostic tests, it is necessary to have duly certified personnel in our environment to perform it. In Mexico, unlike other countries, the figure of the genetic counselor is not formally recognized, which is why geneticists doctors give this advice within the healthcare context (as part of the outpatient consultation). The number of these health professionals is below the internationally proposed requirement standard of one medical geneticist per 100,000 inhabitants, which is only met in Mexico City, making it of utmost importance to increase the training of medical geneticists as well such as the inclusion of these in the different health institutions of the country.


El asesoramiento genético es el proceso de comunicación que tiene como objetivo ayudar al individuo, la pareja o la familia a comprender y adaptarse a las implicaciones médicas, psicológicas, sociales, familiares y reproductivas de una condición genética. Dada la expansión de la medicina de precisión y el reciente incremento del uso de pruebas diagnósticas moleculares, es necesario contar en nuestro medio con personal debidamente certificado para realizarlo. En México, a diferencia de otros países, la figura del asesor en genética no está formalmente reconocida; por lo que médicos genetistas otorgan este asesoramiento dentro del contexto asistencial (formando parte de la consulta externa). El número de estos profesionales de la salud está por debajo del estándar de requerimiento propuesto internacionalmente, de un genetista por cada 100,000 habitantes, el cual únicamente se cumple en la Ciudad de México, por lo que resulta de suma importancia incrementar la formación de médicos genetistas, así como la inclusión de estos en las distintas instituciones de salud del país.


Subject(s)
Genetic Counseling/statistics & numerical data , Referral and Consultation , Delivery of Health Care , Health Personnel , Humans , Mexico
15.
Eur J Hum Genet ; 29(5): 872-880, 2021 05.
Article in English | MEDLINE | ID: mdl-33723355

ABSTRACT

The demand for genetic testing of hereditary breast cancer genes such as BRCA1 and BRCA2 has continued to increase with the lowering costs of testing, raised awareness in the general public, and implications for breast cancer treatment when a patient is identified as having a germline pathogenic variant. Historically within Australia, patients affected by high genetic risk breast cancers have been referred to a familial cancer centre (FCC) for assessment and testing, resulting in wait times for an appointment for pre- and post-test genetic counselling and an increased demand on the public-funded FCC. To improve patient access and pace of genetic testing, as well as refocus FCC resources, a mainstream clinical genetic testing program was rolled out in September 2017 through the Parkville FCC (PFCC) in Australia at 10 hospital sites. This program enables specialist doctors of eligible patients affected by breast cancer to arrange genetic testing directly at an oncology/surgical appointment and follow up the results as part of the patients' routine clinical care. In this model, the specialist doctor is responsible for any treatment implications of the genetic test result, and the PFCC is responsible for result interpretation, future cancer risk, family cascade testing and segregation testing where warranted. To date the program has had successful uptake, a notable pathogenic variant detection rate, reduced the burden on the PFCC enabling a reallocation of resources and has streamlined the process of genetic testing for eligible patients. Investigation into the patient and clinician experiences of the mainstream program is required.


Subject(s)
Breast Neoplasms/genetics , Genetic Carrier Screening/statistics & numerical data , Genetic Counseling/statistics & numerical data , Australia , Breast Neoplasms/diagnosis , Female , Genetic Carrier Screening/standards , Genetic Counseling/standards , Health Plan Implementation , Humans , Male , Pedigree
16.
Future Oncol ; 17(13): 1601-1609, 2021 May.
Article in English | MEDLINE | ID: mdl-33415992

ABSTRACT

Aim: FLABRA evaluated the prevalence of BRCA mutations, genetic counseling and management approaches in patients with ovarian cancer in Latin America. Patients & methods: Patients with ovarian cancer from six Latin-American countries were enrolled. Tumor samples were tested for BRCA mutations (BRCAmut). In cases with BRCAmut, blood samples were analyzed to determine germline versus somatic mutations. Medical records were reviewed for counseling approach and treatment plan. Results: From 472 patients enrolled, 406 samples yielded conclusive results: 282 were BRCA wild-type (BRCAwt), 115 were BRCAmut and nine were variants of uncertain significance. In total, 110/115 were tested for germline mutations (77 germline and 33 somatic). Conclusion: Tumor testing to identify mutations in BRCA1/2 in ovarian cancer can help optimize treatment choices, meaning fewer patients require germline testing and genetic counseling, a scant resource in Latin America. Clinical trial registration: NCT02984423 (ClinicalTrials.gov).


Subject(s)
Carcinoma, Ovarian Epithelial/diagnosis , Genetic Testing/statistics & numerical data , Ovarian Neoplasms/diagnosis , Adult , Aged , BRCA1 Protein/genetics , BRCA2 Protein/genetics , Carcinoma, Ovarian Epithelial/epidemiology , Carcinoma, Ovarian Epithelial/genetics , Carcinoma, Ovarian Epithelial/therapy , Cross-Sectional Studies , DNA Mutational Analysis/economics , DNA Mutational Analysis/statistics & numerical data , Female , Genetic Counseling/economics , Genetic Counseling/statistics & numerical data , Genetic Testing/economics , Humans , Latin America/epidemiology , Middle Aged , Ovarian Neoplasms/epidemiology , Ovarian Neoplasms/genetics , Ovarian Neoplasms/therapy , Precision Medicine/methods , Prevalence , Prospective Studies , Young Adult
17.
Eur J Med Genet ; 64(7): 104024, 2021 Jul.
Article in English | MEDLINE | ID: mdl-32798762

ABSTRACT

PURPOSE: Clinical diagnostic genome-wide (exome or genome) sequencing (GWS) in British Columbia requires funding approval by a provincial agency on a case-by-case basis. The CAUSES Clinic was a pediatric translational trio-based GWS study at BC Children's and Women's Hospitals. Referrals to the CAUSES Clinic were made through a Genomic Consultation Service (GCS), a multidisciplinary team led by genetic counsellors that provided advice regarding genomic testing for physicians considering GWS for their patients. Here we review the outcomes of the GCS, focusing on patients not recommended for the CAUSES Study. METHODS: Demographic, clinical, and testing data were abstracted from patient charts. Logistic regression analysis was used to explore associations between demographic and clinical variables and two outcomes: the type of recommendation and referring physicians' decisions to follow the recommendation. RESULTS: Of 972 GCS referrals, 248 patients were not referred to the CAUSES Study. GWS (vs. a targeted test; e.g. multi-gene panel) was more likely to be recommended to physicians of patients with ID than physicians of patients without ID (OR = 2.98; 95% CI = 1.46 to 6.27; n = 149). In total, 40% of physicians who were recommended to pursue clinical genomic testing submitted an application for funding approval; 71% of applications were approved for funding. Among approved tests, 50% resulted in a diagnosis, including 33% of targeted tests and 82% of GWS tests (χ2 (1) = 5.0, p = 0.026). CONCLUSION: The GCS provided an effective model in which physicians can interface with genetic specialists, including genetic counsellors, to facilitate appropriate genomic test selection.


Subject(s)
Genetic Counseling/organization & administration , Genetic Testing/statistics & numerical data , Triage/standards , Adolescent , Adult , British Columbia , Child , Child, Preschool , Facilities and Services Utilization/statistics & numerical data , Female , Genetic Counseling/statistics & numerical data , Health Plan Implementation/statistics & numerical data , Humans , Infant , Male , Referral and Consultation/organization & administration , Referral and Consultation/standards , Referral and Consultation/statistics & numerical data , Triage/organization & administration , Triage/statistics & numerical data , Whole Genome Sequencing/statistics & numerical data
18.
Clin Breast Cancer ; 21(1): e74-e79, 2021 02.
Article in English | MEDLINE | ID: mdl-32828665

ABSTRACT

BACKGROUND: Emerging data suggest screening mammography may be effective in detecting breast cancer early in high-risk men. We evaluated current screening recommendations as a risk management strategy in men at elevated risk for breast cancer. PATIENTS AND METHODS: This institutional review board-approved, Health Insurance Portability and Accountability Act (HIPAA)-compliant study reviewed consecutive men who underwent genetic counseling and multigene panel testing (MGPT) for breast cancer risk assessment at our institution between 2012 and 2018. Patient risk factors, test indications, and MGPT outcomes were recorded, then correlated with screening recommendations by either clinical breast examination or screening mammography. Recommendation consistency among practitioners was evaluated. Patient adherence to screening mammography (defined as undergoing screening mammography as recommended) was assessed. Statistical analysis was performed at the 2-sided 5% significance level. RESULTS: A total of 414 asymptomatic men underwent both genetic counseling and MGPT (mean age, 47 years; range, 18-91 years) for breast cancer risk assessment. Of this group, 18 (4.3%) of 414 had a personal history of breast cancer, and 159 (38.4%) of 414 had a family history of breast cancer before MGPT. Among 112 men with positive MGPT results, BRCA1/2 mutations were the most common (56.3%, 63/112). Most BRCA mutation carriers (80.9%, 51/63) were recommended clinical breast examination only. Only 5.9% (2/34) BRCA2 and 10.3% (3/29) BRCA1 carriers were recommended screening mammograms (7.9%, 5/63 of all BRCA carriers). Among men with a personal history of breast cancer, only 9 (50%) of 18 were recommended screening mammograms. Overall adherence to screening mammogram in men was 71.4% (10/14), which ultimately yielded two cancers. Breast cancer screening recommendations varied widely among practitioners, with some recommending clinical breast examination only, and others also recommending mammography. CONCLUSION: Men who are found to be at an elevated risk for breast cancer after undergoing genetic counseling and testing currently receive relatively inconsistent screening recommendations.


Subject(s)
Breast Neoplasms, Male/diagnosis , Early Detection of Cancer/statistics & numerical data , Genetic Counseling/statistics & numerical data , Genetic Testing/statistics & numerical data , Adult , Aged , Genetic Predisposition to Disease/epidemiology , Humans , Male , Middle Aged , Mutation
19.
Future Oncol ; 17(7): 853-864, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33263430

ABSTRACT

Background: Ongoing clinical trials are investigating PARP inhibitors to target the DNA damage repair (DDR) pathway in prostate cancer. DDR mutation screening will guide treatment strategy and assess eligibility for clinical trials. Materials & methods: This systematic review estimated the rate of DDR mutation testing or genetic counseling among men with or at risk of prostate cancer. Results: From 6856 records, one study fulfilled the inclusion criteria and described men undiagnosed with prostate cancer with a family history of BRCA1/2 mutation who received DDR mutation testing. Conclusion: With only one study included in this first systematic review of DDR mutation testing or genetic counseling in men with or at risk of prostate cancer, more research is warranted.


Subject(s)
DNA Mutational Analysis/statistics & numerical data , DNA Repair , Genetic Counseling/statistics & numerical data , Genetic Testing/statistics & numerical data , Prostatic Neoplasms/diagnosis , BRCA1 Protein/genetics , BRCA2 Protein/genetics , Consensus , DNA Mutational Analysis/standards , Drug Resistance, Neoplasm/genetics , Genetic Counseling/standards , Genetic Testing/standards , Humans , Male , Medical History Taking , Mutation , Poly(ADP-ribose) Polymerase Inhibitors/pharmacology , Poly(ADP-ribose) Polymerase Inhibitors/therapeutic use , Practice Guidelines as Topic , Prostatic Neoplasms/drug therapy , Prostatic Neoplasms/genetics
20.
Eur J Hum Genet ; 29(4): 699-708, 2021 04.
Article in English | MEDLINE | ID: mdl-33328582

ABSTRACT

Predictive BRCA testing is offered to asymptomatic individuals to predict future risk where a variant has been identified in a relative. It is uncertain whether all eligible relatives access testing, and whether this is related to health care inequalities. Our aim was to analyse trends and inequalities in uptake of testing, and identify predictors of testing and time-to-receipt of testing. A database from April 2010 to March 2017 was collated. Multivariate analysis explored individual associations with testing. Predictor variables included gender, BRCA test type, cancer history, Index of Multiple Deprivation (IMD) and education status. To evaluate factors associated with time-to-testing, a Cox proportional-hazards (CP) model was used. Of 779 tests undertaken, 336 (43.1%) were identified with a BRCA variant. A total of 537 (68.9%) were female and in 83.4% (387/464) of probands, predictive testing was received by relatives. Analysis identified inequalities since decreased testing was found when the proband was unaffected by cancer (OR 0.14, 95% CI 0.06-0.33). Median time-to-testing was 390 days (range, 0-7090 days) and the CP model also identified inequalities in the hazard ratio (HR) for testing for people aged >40 was higher than for aged <40 (HR 1.41, 95% CI 1.20-1.67) and BRCA2 testing was higher than for BRCA1 testing (HR 1.39, 95% CI 1.18-1.64). Reduced testing was found when probands were unaffected by cancer and time-to-testing was found to vary by age and BRCA1/2 test. Given limited study sample size, further research is recommended to examine inequalities in predictive BRCA testing.


Subject(s)
Genetic Carrier Screening/statistics & numerical data , Health Knowledge, Attitudes, Practice , Hereditary Breast and Ovarian Cancer Syndrome/genetics , Adult , Age Factors , BRCA1 Protein/genetics , BRCA2 Protein/genetics , Educational Status , Female , Genetic Counseling/psychology , Genetic Counseling/standards , Genetic Counseling/statistics & numerical data , Hereditary Breast and Ovarian Cancer Syndrome/diagnosis , Hereditary Breast and Ovarian Cancer Syndrome/psychology , Humans , Male , United Kingdom
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