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1.
Biotechnol Lett ; 42(11): 2345-2355, 2020 Nov.
Article in English | MEDLINE | ID: mdl-32623532

ABSTRACT

OBJECTIVE: To obtain novel glucoamylase from Daqu microbe. RESULTS: A dominant strain known as LZ2 with high activity of hydrolyzing starch was isolated from Luzhou Daqu, a Chinese traditional fermentation starter. The LZ2 was identified as Aspergillus oryzae by 18S rDNA sequence analysis. Glucoamylase from LZ2, named as GA-LZ2, was purified to homogeneity and showed a single band with expected molecular mass of 60 kD. The GA-LZ2 effectively degraded amylose, rice starch and wheat starch. Optimal temperature and pH value of enzyme were 60 °C and pH 4.0 respectively. The GA-LZ2 displayed significant thermal stability and pH stability at moderate temperature and low pH. Intriguingly, the thermostability was enhanced in the presence of starch. In addition, GA-LZ2 exhibited insensitivity to glucose, independence of metal ions and tolerance to organic solvents. The GA-LZ2 retained complete activity in the presence of 100 mM glucose and 5% ethanol and methanol. CONCLUSION: Glucoamylase GA-LZ2 displayed broad substrate specificity, strong stability and tolerance, suggesting that GA-LZ2 carry potential for industrial application in bioethanol production.


Subject(s)
Aspergillus oryzae/classification , Glucan 1,4-alpha-Glucosidase/isolation & purification , RNA, Ribosomal, 18S/genetics , Sequence Analysis, DNA/methods , Amylose/chemistry , Aspergillus oryzae/enzymology , Aspergillus oryzae/genetics , Aspergillus oryzae/isolation & purification , DNA, Fungal/genetics , DNA, Ribosomal/genetics , Enzyme Stability , Fermented Foods , Fungal Proteins/isolation & purification , Fungal Proteins/metabolism , Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/metabolism , Hot Temperature , Hydrogen-Ion Concentration , Phylogeny
2.
Protein Expr Purif ; 170: 105609, 2020 06.
Article in English | MEDLINE | ID: mdl-32070765

ABSTRACT

Brown-rot fungi preferentially degrade softwood and cause severe breakdown of wooden structures. At the initial stage of the brown-rot decay, penetrating hyphae of the fungi are observed in ray parenchyma. Since starch grains are known to be present in the ray parenchyma of sapwood, investigation of the functions and roles of the starch-degrading enzymes is important to understand the initial stage of brown-rot decay. We purified and characterized two starch-degrading enzymes, an α-amylase (FpAmy13A) and a glucoamylase (FpGLA15A), from the brown-rot fungus, Fomitopsis palustris, and cloned the corresponding genes. The optimal temperature for both enzymes was 60 °C. FpAmy13A showed higher activity at a broad range of pH from 2.0 to 5.0, whereas FpGLA15A was most active at pH 5.0-6.0. Notable thermal stability was found for FpGLA15A. Approximately 25% of the activity remained even after treatment at 100 °C for 30 min in sodium phosphate buffer at pH 7.0. These different characteristics imply the different roles of these enzymes in the starch degradation of wood.


Subject(s)
Coriolaceae/enzymology , Fungal Proteins/metabolism , Glucan 1,4-alpha-Glucosidase/metabolism , Recombinant Proteins/metabolism , Starch/metabolism , alpha-Amylases/metabolism , Amino Acid Sequence , Cloning, Molecular , Coriolaceae/chemistry , Coriolaceae/genetics , Enzyme Stability , Escherichia coli/genetics , Escherichia coli/metabolism , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Glucan 1,4-alpha-Glucosidase/genetics , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hydrogen-Ion Concentration , Hydrolysis , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Sequence Alignment , Sequence Homology, Amino Acid , Starch/chemistry , Temperature , Wood/microbiology , alpha-Amylases/genetics , alpha-Amylases/isolation & purification
3.
J Basic Microbiol ; 59(4): 375-384, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30681161

ABSTRACT

In the present study, glucoamylase produced from a soil bacterium Paenibacillus amylolyticus NEO03 was cultured under submerged fermentation conditions. The extracellular enzyme was purified by starch adsorption chromatography and further by gel filtration, with 2.73-fold and recovery of 40.02%. The protein exhibited molecular mass of ∼66,000 Da as estimated by SDS-PAGE and depicted to be a monomer. The enzyme demonstrated optimum activity at pH range 6.0-7.0 and temperature range 30-40 °C. Glucoamylase was mostly activated by Mn2+ metal ions and depicted no dependency on Ca2+ ions. The enzyme preferentially hydrolyzed all the starch substrates. High substrate specificity was demonstrated towards soluble starch and kinetic values Km and Vmax were 2.84 mg/ml and 239.2 U/ml, respectively. The products of hydrolysis of soluble starch were detected by thin layer chromatography which showed only D -glucose, indicating a true glucoamylase. The secreted glucoamylase from P. amylolyticus strain possesses properties suitable for saccharification processes such as biofuel production.


Subject(s)
Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Paenibacillus/enzymology , Culture Media , Glucan 1,4-alpha-Glucosidase/chemistry , Hydrogen-Ion Concentration , Hydrolysis , Kinetics , Molecular Weight , Starch/metabolism , Substrate Specificity , Temperature
4.
Biosci Biotechnol Biochem ; 82(12): 2180-2190, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30122147

ABSTRACT

A glucoamylase from the ectomycorrhizal fungus Tricholoma matsutake (TmGLA) was purified 33.2-fold to homogeneity as a single monomeric glycoprotein with a molecular mass of 63.9 kDa. Maximum activity was observed at 60°C and pH 5.0. The enzyme is active down to 50°C and in the pH range of 4.0-6.0, and its activity is strongly inhibited by Ag+. It degrades α-1,4- and α-1,6-glycosidic linkages in various polysaccharides. Its gene (TmGlu1) was cloned using information from the enzyme's internal amino acid sequences and the whole genome sequence of T. matsutake NBRC 30605. The deduced amino acid sequence showed clear homology with those of GH family 15 proteins. Pichia pastoris transformed with TmGlu1 secreted the active enzyme in a glycosylated form, and its characteristics were the same as the native enzyme.


Subject(s)
Extracellular Space/enzymology , Fungal Proteins/chemistry , Glucan 1,4-alpha-Glucosidase/chemistry , Pichia/genetics , Tricholoma/enzymology , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Enzyme Stability , Fungal Proteins/genetics , Fungal Proteins/isolation & purification , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Fungal , Glucan 1,4-alpha-Glucosidase/genetics , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hydrogen-Ion Concentration , Molecular Weight , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification
5.
Int J Biol Macromol ; 107(Pt A): 1122-1130, 2018 Feb.
Article in English | MEDLINE | ID: mdl-28951303

ABSTRACT

Glucoamylase, cleaving the nonreducing end of starch releasing glucose, is an important enzyme in starch processing. The optimal temperature for industrial glucoamylase activity is 60-70°C, which is not compatible with the optimal growth temperature for Saccharomyces cerevisiae. In this study, 26 fungal strains producing amylolytic activities that were more active at 30°C than at 60°C were isolated from 151 environmental samples. Fungal strain WZ99, producing extracellular amylolytic activities with the lowest optimal temperature at 40°C, was identified as Aspergillus tritici by analysis of morphological and molecular data. An extracellular glucoamylase was purified from A. tritici WZ99. The optimal pH of the enzyme was 4.0-5.0 and optimal temperature was 45°C. The glucoamylase was stable at pH 4.5-10.0 and below 40°C. Metal ions at four concentrations did not inhibit the enzyme activity. The glucoamylase contained a catalytic domain belonging to glycosyl hydrolase family 15 and thus was named as AtriGA15A. The enzyme shared the highest identity of 54% with a glucoamylase from Rasamsonia emersonii. This glucoamylase showing excellent comprehensive enzymatic characteristics might have potential applications in starch-based bioethanol production and starch processing.


Subject(s)
Aspergillus/enzymology , Glucan 1,4-alpha-Glucosidase/chemistry , Starch/chemistry , Aspergillus/genetics , Glucan 1,4-alpha-Glucosidase/genetics , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucose/chemistry , Hydrolysis , Kinetics , Saccharomyces cerevisiae/enzymology , Starch/biosynthesis , Substrate Specificity
6.
Microb Cell Fact ; 16(1): 75, 2017 May 02.
Article in English | MEDLINE | ID: mdl-28464820

ABSTRACT

BACKGROUND: Amylases are used in various industrial processes and a key requirement for the efficiency of these processes is the use of enzymes with high catalytic activity at ambient temperature. Unfortunately, most amylases isolated from bacteria and filamentous fungi have optimal activity above 45 °C and low pH. For example, the most commonly used industrial glucoamylases, a type of amylase that degrades starch to glucose, are produced by Aspergillus strains displaying optimal activities at 45-60 °C. Thus, isolating new amylases with optimal activity at ambient temperature is essential for improving industrial processes. In this report, a glucoamylase secreted by the cold-adapted yeast Tetracladium sp. was isolated and biochemically characterized. RESULTS: The effects of physicochemical parameters on enzyme activity were analyzed, and pH and temperature were found to be key factors modulating the glucoamylase activity. The optimal conditions for enzyme activity were 30 °C and pH 6.0, and the K m and k cat using soluble starch as substrate were 4.5 g/L and 45 min-1, respectively. Possible amylase or glucoamylase encoding genes were identified, and their transcript levels using glucose or soluble starch as the sole carbon source were analyzed. Transcription levels were highest in medium supplemented with soluble starch for the potential glucoamylase encoding gene. Comparison of the structural model of the identified Tetracladium sp. glucoamylase with the solved structure of the Hypocrea jecorina glucoamylase revealed unique structural features that may explain the thermal lability of the glucoamylase from Tetracladium sp. CONCLUSION: The glucoamylase secreted by Tetracladium sp. is a novel cold-adapted enzyme and its properties should render this enzyme suitable for use in industrial processes that require cold-active amylases, such as biofuel production.


Subject(s)
Ascomycota/enzymology , Cold Temperature , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Adaptation, Physiological , Antarctic Regions , Ascomycota/growth & development , Ascomycota/metabolism , Glucan 1,4-alpha-Glucosidase/chemistry , Glycosylation , Hydrogen-Ion Concentration , Kinetics , Models, Molecular , Starch/metabolism , Substrate Specificity
7.
Int J Biol Macromol ; 102: 779-788, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28412339

ABSTRACT

Microbial amylases are used to produce ethanol, glucose and can be applied in textiles products, detergents and other industries. This study aimed to determine the best carbon source concentration to induce the amylase production by A. japonicus, and its purification and biochemical characterization. For that, this fungus was cultivated in Khanna medium, pH 5.5, for 4 days, at 25°C, in static condition, supplemented with potato starch and maltose in different concentrations. The fungal crude enzymatic extract was purified in a unique elution in DEAE-cellulose column and the molecular mass was determined as 72kDa. The optimum temperature and pH was 65°C and 5.0, respectively. Amylase remained 75% of its activity after one hour at 50°C and was stable in the pH range 3.0-7.0. The analysis of the end-products by thin layer chromatography showed only glucose formation, which characterizes the purified enzyme as a glucoamylase. Amylopectin was the best substrate for the enzyme assay and Mn+2 and Pb+2 were good glucoamylase activators. This activation, in addition to the biochemical characteristics are important results for future biotechnological applications of this glucoamylase in the recycling and deinking process by the paper industries.


Subject(s)
Aspergillus/enzymology , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Lead/pharmacology , Manganese/pharmacology , Amylose/metabolism , Dose-Response Relationship, Drug , Edetic Acid/pharmacology , Enzyme Activation/drug effects , Glucan 1,4-alpha-Glucosidase/chemistry , Hydrogen-Ion Concentration , Hydrolysis , Kinetics , Maltose/pharmacology , Mercaptoethanol/pharmacology , Molecular Weight , Phylogeny , Temperature
8.
Protein Expr Purif ; 129: 122-127, 2017 01.
Article in English | MEDLINE | ID: mdl-26102340

ABSTRACT

The gene encoding a novel glucoamylase (GlucaM) from the Corallococcus sp. strain EGB was cloned and heterologous expressed in Escherichia coli BL21(DE3), and the enzymatic characterization of recombinant GlucaM (rGlucaM) was determined in the study. The glucaM had an open reading frame of 1938 bp encoding GlucaM of 645 amino acids with no signal peptide. GlucaM belongs to glycosyl hydrolase family 15 and shares the highest identity 96% with the GH15 glucoamylase of Corallococcus coralloides DSM 2259. The rGlucaM with His-tag was purified by the Ni2+-NTA resin, with a specific activity from 3.4 U/mg up to 180 U/mg, and the molecular weight of rGlucaM was approximately 73 kDa on SDS-PAGE. The Km and Vmax of rGlucaM for soluble starch were 1.2 mg/mL and 46 U/mg, respectively. rGlucaM was optimally active at pH 7.0 and 50 °C and had highly tolerance to high concentrations of salts, detergents, and various organic solvents. rGlucaM hydrolyzed soluble starch to glucose, and hydrolytic activities were also detected with amylopectin, amylase, glycogen, starch (potato), α-cyclodextrin, starch (corn and potato). The analysis of hydrolysis products shown that rGlucaM with α-(1-4),(1-6)-D-glucan glucohydrolase toward substrates. These characteristics indicated that the GlucaM was a new member of glucoamylase family and a potential candidate for industrial application.


Subject(s)
Bacterial Proteins , Gene Expression , Glucan 1,4-alpha-Glucosidase , Myxococcales/genetics , Starch/chemistry , Bacterial Proteins/biosynthesis , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Chromatography, Affinity , Escherichia coli/genetics , Escherichia coli/metabolism , Glucan 1,4-alpha-Glucosidase/biosynthesis , Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/genetics , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hydrolysis , Myxococcales/enzymology , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification
9.
Biosci Biotechnol Biochem ; 80(9): 1681-92, 2016 Sep.
Article in English | MEDLINE | ID: mdl-27151561

ABSTRACT

This paper describes the modern enzymology in Japanese bioindustries. The invention of Takadiastase by Jokiti Takamine in 1894 has revolutionized the world of industrial enzyme production by fermentation. In 1949, a new γ-amylase (glucan 1,4-α-glucosidase, EC 3.2.1.3) from A. luchuensis (formerly designated as A. awamori), was found by Kitahara. RNase T1 (guanyloribonuclease, EC 3.1.27.3) was discovered by Sato and Egami. Ando discovered Aspergillus nuclease S1 (single-stranded nucleate endonuclease, EC 3.1.30.1). Aspergillopepsin I (EC 3.4.23.18) from A. tubingensis (formerly designated as A. saitoi) activates trypsinogen to trypsin. Shintani et al. demonstrated Asp76 of aspergillopepsin I as the binding site for the basic substrate, trypsinogen. The new oligosaccharide moieties Man10GlcNAc2 and Man11GlcNAc2 were identified with α-1,2-mannosidase (EC 3.2.1.113) from A. tubingensis. A yeast mutant compatible of producing Man5GlcNAc2 human compatible sugar chains on glycoproteins was constructed. The acid activation of protyrosinase from A. oryzae at pH 3.0 was resolved. The hyper-protein production system of glucoamylase was established in a submerged culture.


Subject(s)
Aspergillus oryzae/enzymology , Biotechnology , Fermentation , Aspartic Acid Endopeptidases/isolation & purification , Aspartic Acid Endopeptidases/metabolism , Aspergillus oryzae/metabolism , Fungal Proteins/isolation & purification , Fungal Proteins/metabolism , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Humans , Japan , Ribonuclease T1/isolation & purification , Ribonuclease T1/metabolism , Single-Strand Specific DNA and RNA Endonucleases/isolation & purification , Single-Strand Specific DNA and RNA Endonucleases/metabolism , Trypsinogen/metabolism
10.
Biochem Biophys Res Commun ; 457(4): 627-34, 2015 Feb 20.
Article in English | MEDLINE | ID: mdl-25613865

ABSTRACT

In this study, a necrosis-inducing protein was purified from the culture filtrate of the necrotrophic fungus Botrytis cinerea BC-98 strain. Secreted proteins were collected and fractionated by liquid chromatography. The fraction with the highest necrosis-inducing activity was further purified. A glycoprotein named BcGs1 was identified by 2D electrophoresis and mass spectrometry. The BcGs1 protein consisted of 672 amino acids with a theoretical molecular weight of 70.487 kDa. Functional domain analysis indicated that BcGs1 was a glucan 1,4-alpha-glucosidase, a cell wall-degrading enzyme, with a Glyco_hydro_15 domain and a CBM20_glucoamylase domain. The BcGs1 protein caused necrotic lesions that mimicked a typical hypersensitive response and H2O2 production in tomato and tobacco leaves. BcGs1-treated plants exhibited resistance to B. cinerea, Pseudomonas syringae pv. tomato DC3000 and tobacco mosaic virus in systemic leaves. In addition, BcGs1 triggered elevation of the transcript levels of the defence-related genes PR-1a, TPK1b and Prosystemin. This is the first report of a Botrytis glucan 1,4-alpha-glucosidase triggering host plant immunity as an elicitor. These results lay a foundation for further study of the comprehensive interaction between plants and necrotrophic fungi.


Subject(s)
Botrytis/physiology , Fungal Proteins/metabolism , Glycoproteins/metabolism , Host-Pathogen Interactions , Nicotiana/microbiology , Plant Diseases/microbiology , Solanum lycopersicum/microbiology , Botrytis/chemistry , Fungal Proteins/chemistry , Fungal Proteins/isolation & purification , Gene Expression Regulation, Plant , Genes, Plant , Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Glycoproteins/chemistry , Glycoproteins/isolation & purification , Solanum lycopersicum/genetics , Plant Diseases/genetics , Plant Leaves/genetics , Plant Leaves/microbiology , Nicotiana/genetics
11.
J Microbiol Biotechnol ; 24(12): 1690-8, 2014 Dec 28.
Article in English | MEDLINE | ID: mdl-25112315

ABSTRACT

Partial purification of glucoamylase from solid-state fermentation culture was, firstly, investigated by reverse micellar extraction (RME). To avoid back extraction problems, the glucoamylase was kept in the original aqueous phase, while the other undesired proteins/ enzymes were moved to the reverse micellar organic phase. The individual and interaction effects of main factors (i.e., pH and NaCl concentration in the aqueous phase, and concentration of sodium bis-2-ethyl-hexyl-sulfosuccinate (AOT) in the organic phase) were studied using response surface methodology. The optimum conditions for the maximum recovery of the enzyme were pH 2.75, 100 mM NaCl, and 200 mM AOT. Furthermore, the optimum organic to aqueous volume ratio (Vorg/Vaq) and appropriate number of sequential extraction stages were 2 and 3, respectively. Finally, 60% of the undesired enzymes including proteases and xylanases were removed from the aqueous phase, while 140% of glucoamylase activity was recovered in the aqueous phase and the purification factor of glucoamylase was found to be 3.0-fold.


Subject(s)
Aspergillus niger/enzymology , Glucan 1,4-alpha-Glucosidase/isolation & purification , Biotechnology/methods , Chemical Fractionation/methods , Fermentation , Hydrogen-Ion Concentration , Sodium Chloride/metabolism , Succinates/metabolism
12.
J Basic Microbiol ; 54(5): 333-9, 2014 May.
Article in English | MEDLINE | ID: mdl-23681744

ABSTRACT

This study investigates the production of glucoamylase from Aspergillus phoenicis in Machado Benassi (MB) medium using 1% maltose as carbon source. The maximum amylase activity was observed after four days of cultivation, on static conditions at 30 °C. Glucoamylase production was induced by maltose and inhibited by different glucose concentrations. The optimum of temperature and pH were 60-65 °C, and 4.5 or 5.0 to sodium acetate and Mcllvaine buffers, respectively. It was observed that the enzyme was totally stable at 30-65 °C for 1 h, and the pH range was 3.0-6.0. The enzyme was mainly activated by manganese (176%), and calcium (130%) ions. The products of starch hydrolysis were analyzed by thin layer chromatography and after 3 h, only glucose was detected, characterizing the amylolytic activity as a glucoamylase.


Subject(s)
Aspergillus/enzymology , Aspergillus/growth & development , Calcium/metabolism , Enzyme Activators/metabolism , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Manganese/metabolism , Chromatography, Thin Layer , Culture Media/chemistry , Enzyme Inhibitors/metabolism , Fermentation , Glucose/metabolism , Hydrogen-Ion Concentration , Hydrolysis , Maltose/metabolism , Sodium Acetate/metabolism , Starch/metabolism , Temperature
13.
Appl Biochem Biotechnol ; 172(1): 73-86, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24046254

ABSTRACT

Mining fungal genomes for glucoamylase and α-amylase encoding sequences led to the selection of 23 candidates, two of which (designated TSgam-2 and NFamy-2) were advanced to testing for cooked or raw starch hydrolysis. TSgam-2 is a 66-kDa glucoamylase recombinantly produced in Pichia pastoris and originally derived for Talaromyces stipitatus. When harvested in a 20-L bioreactor at high cell density (OD600 > 200), the secreted TSgam-2 enzyme activity from P. pastoris strain GS115 reached 800 U/mL. In a 6-L working volume of a 10-L fermentation, the TSgam-2 protein yield was estimated to be ∼8 g with a specific activity of 360 U/mg. In contrast, the highest activity of NFamy-2, a 70-kDa α-amylase originally derived from Neosartorya fischeri, and expressed in P. pastoris KM71 only reached 8 U/mL. Both proteins were purified and characterized in terms of pH and temperature optima, kinetic parameters, and thermostability. TSgam-2 was more thermostable than NFamy-2 with a respective half-life (t1/2) of >300 min at 55 °C and >200 min at 40 °C. The kinetic parameters for raw starch adsorption of TSgam-2 and NFamy-2 were also determined. A combination of NFamy-2 and TSgam-2 hydrolyzed cooked potato and triticale starch into glucose with yields, 71-87 %, that are competitive with commercially available α-amylases. In the hydrolysis of raw starch, the best hydrolysis condition was seen with a sequential addition of 40 U of a thermostable Bacillus globigii amylase (BgAmy)/g starch at 80 °C for 16 h, and 40 U TSgam-2/g starch at 45 °C for 24 h. The glucose released was 8.7 g/10 g of triticale starch and 7.9 g/10 g of potato starch, representing 95 and 86 % of starch degradation rate, respectively.


Subject(s)
Data Mining , Gene Expression Regulation, Fungal , Genome, Fungal/genetics , Glucan 1,4-alpha-Glucosidase/genetics , Starch/metabolism , Talaromyces/genetics , alpha-Amylases/genetics , Adsorption , Escherichia coli/genetics , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Hydrolysis , Kinetics , Metals/pharmacology , Pichia/genetics , Sequence Analysis , Talaromyces/enzymology , alpha-Amylases/isolation & purification , alpha-Amylases/metabolism
14.
Biochemistry (Mosc) ; 78(10): 1180-9, 2013 Oct.
Article in English | MEDLINE | ID: mdl-24237153

ABSTRACT

Here we report the first isolation to homogeneous forms of two glucoamylases from the fungus Penicillium verruculosum and their study in comparison with known glucoamylases from Aspergillus awamori and Aspergillus niger. Genes that encode glucoamylases from P. verruculosum were cloned and expressed in the fungus Penicillium canescens, and the recombinant glucoamylases were obtained with subsequent study of their molecular weights, isoelectric points, optimal temperature and pH values, and stability. The catalytic activities of the recombinant glucoamylases were determined in relation to soluble potato starch. Changes in molecular mass distribution and content of low molecular weight products during starch hydrolysis by glucoamylases from P. verruculosum, A. awamori, and A. niger were studied. An exo-depolymerization mechanism was established to be the pathway for destruction of starch by the glucoamylases.


Subject(s)
Aspergillus/enzymology , Glucan 1,4-alpha-Glucosidase/metabolism , Penicillium/enzymology , Amylopectin/chemistry , Amylopectin/metabolism , Amylose/chemistry , Amylose/metabolism , Biocatalysis , Enzyme Stability , Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hydrogen-Ion Concentration , Hydrolysis , Kinetics , Starch/chemistry , Starch/metabolism , Substrate Specificity , Temperature
15.
Bioresour Technol ; 148: 157-62, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24050923

ABSTRACT

A high inulinase activity was found in three commercially available glucoamylase enzymes. Its origin was investigated and two proteins in the commercial glucoamylases were identified as the potential enzymes showing inulinase activity. One of the commercial glucoamylases, GA-L New from Genencor, was used for Jerusalem artichoke tubers (Jat) hydrolysis and a high hydrolysis yield of fructose was obtained. The simultaneous saccharification and lactic acid fermentation (SSF) of Jat was carried out using GA-L New as the inulinase and Pediococcus acidilactici DQ2 as the fermenting strain. A high lactic acid titer, yield, and productivity of 111.5 g/L, 0.46 g/g DM, and 1.55 g/L/h, respectively, were obtained within 72 h. The enzyme cost using the commercial glucoamylase as inulinase was compared to that using the typical inulinase and a large profit margin was identified. The results provided a practical way of Jat application for lactic acid production using cheap commercial glucoamylase enzyme.


Subject(s)
Glucan 1,4-alpha-Glucosidase/metabolism , Helianthus/metabolism , Inulin/metabolism , Lactic Acid/biosynthesis , Plant Tubers/metabolism , Carbohydrate Metabolism , Electrophoresis, Polyacrylamide Gel , Enzyme Stability , Fermentation , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hydrogen-Ion Concentration , Hydrolysis , Molecular Weight , Temperature
16.
Prikl Biokhim Mikrobiol ; 47(4): 455-61, 2011.
Article in English | MEDLINE | ID: mdl-21950121

ABSTRACT

A strain of endophytic fungus EF6 isolated from Thai medicinal plants was found to produce higher levels of extracellular glucoamylase. This strain produced glucoamylase of culture filtrate when grown on 1% soluble starch. The enzyme was purified and characterized. Purification steps involved (NH4)2SO4 precipitation, anion exchange, and gel filtration chromatography. Final purification fold was 14.49 and the yield obtained was 9.15%. The enzyme is monomeric with a molecular mass of 62.2 kDa as estimated by SDS-PAGE, and with a molecular mass of 62.031 kDa estimated by MALDI-TOF spectrometry. The temperature for maximum activity was 60 degrees C. After 30 min for incubation, glucoamylase was found to be stable lower than 50 degrees C. The activity decrease rapidly when residual activity was retained about 45% at 55 degrees C. The pH optimum of the enzyme activity was 6.0, and it was stable over a pH range of 4.0-7.0 at 50 degrees C. The activity of glucoamylase was stimulated by Ca2+, Co2+, Mg2+, Mn2+, glycerol, DMSO, DTT and EDTA, and strongly inhibited by Hg2+. Various types of starch were test, soluble starch proved to be the best substrate for digestion process. The enzyme catalyzes the hydrolysis of soluble starch and maltose as the substrate, the enzyme had Km values of 2.63, and 1.88 mg/ml and Vmax, values of 1.25, and 2.54 U/min/mg protein, and Vmax/Km values of 0.48 and 1.35, respectively. The internal amino acid sequences of endophytic fungus EF6 glucoamylase; RALAN HKQVV DSFRS have similarity to the sequence of the glucoamylase purified form Thermomyces lanuginosus. From all results indicated that this enzyme is a glucoamylase (1,4-alpha-D-glucan glucanohydrolase).


Subject(s)
Ascomycota/enzymology , Glucan 1,4-alpha-Glucosidase , Starch/metabolism , Amino Acid Sequence , Ascomycota/chemistry , Chromatography, Gel , Electrophoresis, Polyacrylamide Gel , Enzyme Stability , Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glucan 1,4-alpha-Glucosidase/metabolism , Hydrogen-Ion Concentration , Hydrolysis , Kinetics , Maltose/metabolism , Metals/metabolism , Molecular Sequence Data , Molecular Weight , Polymerase Chain Reaction , Sequence Homology, Amino Acid , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Substrate Specificity , Temperature
17.
Biotechnol Prog ; 27(6): 1629-43, 2011.
Article in English | MEDLINE | ID: mdl-22238769

ABSTRACT

A model-based rational strategy for the selection of chromatographic resins is presented. The main question being addressed is that of selecting the most optimal chromatographic resin from a few promising alternatives. The methodology starts with chromatographic modeling,parameters acquisition, and model validation, followed by model-based optimization of the chromatographic separation for the resins of interest. Finally, the resins are rationally evaluated based on their optimized operating conditions and performance metrics such as product purity, yield, concentration, throughput, productivity, and cost. Resin evaluation proceeds by two main approaches. In the first approach, Pareto frontiers from multi-objective optimization of conflicting objectives are overlaid for different resins, enabling direct visualization and comparison of resin performances based on the feasible solution space. The second approach involves the transformation of the resin performances into weighted resin scores, enabling the simultaneous consideration of multiple performance metrics and the setting of priorities. The proposed model-based resin selection strategy was illustrated by evaluating three mixed mode adsorbents (ADH, PPA, and HEA) for the separation of a ternary mixture of bovine serum albumin, ovalbumin, and amyloglucosidase. In order of decreasing weighted resin score or performance, the top three resins for this separation were ADH [PPA[HEA. The proposed model-based approach could be a suitable alternative to column scouting during process development, the main strengths being that minimal experimentation is required and resins are evaluated under their ideal working conditions, enabling a fair comparison. This work also demonstrates the application of column modeling and optimization to mixed mode chromatography.


Subject(s)
Chromatography/instrumentation , Glucan 1,4-alpha-Glucosidase/isolation & purification , Ovalbumin/isolation & purification , Resins, Synthetic/chemistry , Serum Albumin, Bovine/isolation & purification , Adsorption , Animals , Cattle , Chromatography/economics , Chromatography/methods , Glucan 1,4-alpha-Glucosidase/chemistry , Ovalbumin/chemistry , Resins, Synthetic/economics , Serum Albumin, Bovine/chemistry
18.
J Biosci Bioeng ; 110(6): 670-4, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20708432

ABSTRACT

To enhance glucoamylase and α-amylase production from Monascus anka, we investigated the influence of different culture conditions on enzyme production and purified and characterized these enzymes. The effect of different raw materials was investigated by using solid-state plates of raw materials such as barley and non-waxy or waxy rice. The barley plate was the most suitable for mycelial growth, but glucoamylase and α-amylase production per growth area did not differ according to the raw material. Investigation of the effect of temperature showed that incubation at 37 °C promoted maximal cell growth, while incubation at 25 °C and at 40 °C resulted in enhanced α-amylase and glucoamylase production, respectively. Characterization of the purified enzymes revealed that α-amylase was unstable at acidic pH and less resistant to heat (stable at < 40 °C) than glucoamylase. When these culture conditions were applied to enzyme production in red koji, reducing the temperature from 35 °C to 25 °C for 48 h in the late stages of growth resulted in higher glucoamylase and α-amylase production (1.4 and 18 times, respectively) with a concomitant increase in protein stability.


Subject(s)
Glucan 1,4-alpha-Glucosidase/biosynthesis , Monascus/enzymology , alpha-Amylases/biosynthesis , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hordeum/microbiology , Monascus/growth & development , Oryza/microbiology , Temperature , alpha-Amylases/isolation & purification
19.
Appl Biochem Biotechnol ; 162(8): 2197-213, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20549574

ABSTRACT

Catalytic properties of two glucoamylases, AmyC and AmyD, without starch binding domains from Rhizopus oryzae strain 99-880 are determined using heterologously expressed enzyme purified to homogeneity. AmyC and AmyD demonstrate pH optima of 5.5 and 6.0, respectively, nearly one unit higher than the Rhizopus AmyA glucoamylase enzyme. Optimal initial activities are at 60 and 50 °C for AmyC and AmyD, respectively. Inactivation of both enzymes occurs at 50 °C following 30 min pre-incubation. The two enzymes demonstrate substantially slower catalytic rates toward soluble starch relative to AmyA. AmyC has similar k(cat) and K(m) for oligosaccharides to other Rhizopus and Aspergillus glucoamylases; however, the enzyme has a 2-fold lower K(m) (maltose) . AmyD has a 3-fold higher K(m) and lower k(cat) for maltooligosaccharides than AmyC and other glucoamylases. AmyC (but not AmyD) exhibits substrate inhibition. K(i) for substrate inhibition decreases with increasing length of the oligosaccharides. Data from pre-steady-state binding of AmyC to maltose and maltotriose and pre-steady-state to steady-state catalytic turnover experiments of AmyC acting on maltotriose were used to interrogate models of substrate inhibition. In the preferred model, AmyC accumulates an enzyme-maltose-maltotriose dead-end complex in the steady state.


Subject(s)
Biocatalysis , Glucan 1,4-alpha-Glucosidase/genetics , Glucan 1,4-alpha-Glucosidase/metabolism , Pichia/genetics , Rhizopus/enzymology , Starch/metabolism , Enzyme Stability , Gene Expression , Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/isolation & purification , Hydrogen-Ion Concentration , Kinetics , Protein Structure, Tertiary , Spectrometry, Fluorescence , Temperature , Trisaccharides/metabolism
20.
Appl Biochem Biotechnol ; 160(3): 879-90, 2010 Mar.
Article in English | MEDLINE | ID: mdl-19484200

ABSTRACT

Glucoamylase from the thermophilic mold Thermomucor indicae-seudaticae was purified by anion exchange and gel filtration chromatographic techniques using a fast protein liquid chromatographic system. The structure and thermal stability of this unique 'thermostable and neutral glucoamylase' were analyzed by circular dichroism (CD). T. indicae-seudaticae glucoamylase (TGA) contained typical aromatic amino acid (tryptophan/tyrosine) fingerprints in its tertiary structure. Analysis of the far-UV CD spectrum at pH 7.0 and 25 degrees Celsius revealed the presence of 45% alpha-helix, 43% beta-sheet, and 12% remaining structures. The alpha-helix content was highest at pH 7.0, where glucoamylase is optimally active. This observation points towards the possible (alpha/alpha)(6) barrel catalytic domain in TGA, as reported in microbial glucoamylases. Thermal denaturation curves of the pure protein at different pH values revealed maximum stability at pH 7.0, where no change in the secondary structure was observed upon heating in the temperature range between 20 degrees Celsius and 60 degrees Celsius. The observed midpoint of thermal denaturation (T (m)) of glucoamylase at pH 7.0 was 67.1 degrees Celsius, which decreased on either sides of this pH. Thermostability of TGA enhanced in the presence of starch (0.1%) as no transition curve was obtained in the temperature range between 20 degrees Celsius and 85 degrees Celsius. The only product of TGA action on starch was glucose, and it did not exhibit transglycosylation activity even at 40% glucose that can also be considered as an advantage during starch saccharification.


Subject(s)
Glucan 1,4-alpha-Glucosidase/chemistry , Glucan 1,4-alpha-Glucosidase/metabolism , Mucorales/enzymology , Temperature , Amino Acid Sequence , Biocatalysis , Circular Dichroism , Enzyme Stability , Glucan 1,4-alpha-Glucosidase/isolation & purification , Glycosylation , Protein Denaturation , Protein Structure, Secondary , Protein Structure, Tertiary , Sequence Analysis, DNA
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