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1.
An. bras. dermatol ; 95(3): 298-306, May-June 2020. tab, graf
Article in English | LILACS, Coleciona SUS | ID: biblio-1130892

ABSTRACT

Abstract Background: The increasingly frequent use of dermoscopy makes us think about the possibility of transfer of microorganisms, through the dermatoscope, between doctor and patients. Objectives: To identify the most frequent gram-positive cocci in dermatoscopes and smartphone adapters, as well as the resistance profile, and to evaluate the factors associated with a higher risk of bacterial contamination of the dermatoscopes. Methods: A cross-sectional study was carried out with 118 dermatologists from Porto Alegre/Brazil between September 2017 and July 2018. Gram-positive cocci were identified by MALDI-TOF MS and habits of use of the dermatoscope were evaluated through an anonymous questionnaire. Results: Of the dermatoscopes analysed, 46.6% had growth of gram-positive cocci on the lens and 37.3% on the on/off button. The microorganisms most frequently found were S. epidermidis, S. hominis and S. warneri. Attending a hospital, using the dermatoscope at the hospital, with inpatients and in the intensive care unit were significantly associated with colonisation by gram-positive cocci. The highest resistance rates were observed for penicillin, erythromycin and sulfamethoxazole-trimethoprim. Study limitations: The non-search of gram-negative bacilli, fungi and viruses. Moreover, the small number of adapters did not make it possible to better define if the frequency differences were statistically significant. Conclusion: Coagulase-negative staphylococci were frequently identified. S. aureus was detected only on the lens.


Subject(s)
Humans , Male , Female , Adult , Gram-Positive Bacterial Infections/epidemiology , Gram-Positive Cocci/isolation & purification , Dermoscopy/instrumentation , Smartphone , Dermatologists/statistics & numerical data , Brazil/epidemiology , Microbial Sensitivity Tests , Cross-Sectional Studies , Surveys and Questionnaires , Risk Factors , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/drug effects , Sex Distribution , Age Distribution , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Drug Resistance, Bacterial , Middle Aged , Anti-Bacterial Agents/pharmacology
2.
An Bras Dermatol ; 95(3): 298-306, 2020.
Article in English | MEDLINE | ID: mdl-32303433

ABSTRACT

BACKGROUND: The increasingly frequent use of dermoscopy makes us think about the possibility of transfer of microorganisms, through the dermatoscope, between doctor and patients. OBJECTIVES: To identify the most frequent gram-positive cocci in dermatoscopes and smartphone adapters, as well as the resistance profile, and to evaluate the factors associated with a higher risk of bacterial contamination of the dermatoscopes. METHODS: A cross-sectional study was carried out with 118 dermatologists from Porto Alegre/Brazil between September 2017 and July 2018. Gram-positive cocci were identified by MALDI-TOF MS and habits of use of the dermatoscope were evaluated through an anonymous questionnaire. RESULTS: Of the dermatoscopes analysed, 46.6% had growth of gram-positive cocci on the lens and 37.3% on the on/off button. The microorganisms most frequently found were S. epidermidis, S. hominis and S. warneri. Attending a hospital, using the dermatoscope at the hospital, with inpatients and in the intensive care unit were significantly associated with colonisation by gram-positive cocci. The highest resistance rates were observed for penicillin, erythromycin and sulfamethoxazole-trimethoprim. STUDY LIMITATIONS: The non-search of gram-negative bacilli, fungi and viruses. Moreover, the small number of adapters did not make it possible to better define if the frequency differences were statistically significant. CONCLUSION: Coagulase-negative staphylococci were frequently identified. S. aureus was detected only on the lens.


Subject(s)
Dermatologists/statistics & numerical data , Dermoscopy/instrumentation , Gram-Positive Bacterial Infections/epidemiology , Gram-Positive Cocci/isolation & purification , Smartphone , Adult , Age Distribution , Anti-Bacterial Agents/pharmacology , Brazil/epidemiology , Cross-Sectional Studies , Drug Resistance, Bacterial , Female , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Cocci/drug effects , Gram-Positive Cocci/growth & development , Humans , Male , Microbial Sensitivity Tests , Middle Aged , Risk Factors , Sex Distribution , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Surveys and Questionnaires
3.
BMC Infect Dis ; 18(1): 490, 2018 Sep 29.
Article in English | MEDLINE | ID: mdl-30268097

ABSTRACT

BACKGROUND: Staphylococcus aureus bacteraemia is a common and significant infection, associated with high rates of mortality. Therefore, early identification is important for the initiation of appropriate treatment. The objective of this study was to evaluate the accuracy of blood culture Gram staining along with the finding of an 'oozing sign' to diagnose either Staphylococcus aureus or coagulase-negative staphylococci. METHODS: This single-centre, prospective observational study was performed from May 2017 to November 2017. We used routine blood culture bottles (BacT/ALERT FA and BacT/ALERT SN; bioMérieux, Inc., Durham, NC). Bacterial species were identified and the minimum inhibitory concentration was determined by using the MicroScan WalkAway 96 SI system (Beckman Coulter, Tokyo, Japan). Bottles showing growth were removed, and Gram staining was performed. RESULTS: A total of 118 samples, including 55 aerobic and 63 anaerobic bottle samples, were analysed. The overall sensitivity of Gram staining was 78.7% (95% CI: 65.8-94.3%), and the specificity was 95.0% (95% CI: 84.7-98.4%). CONCLUSION: The 'oozing sign' observed in Gram staining may be useful for the rapid prediction of S. aureus in BacT/ALERT blood culture bottles.


Subject(s)
Bacteremia/diagnosis , Blood Culture/methods , Gram-Positive Cocci/isolation & purification , Staphylococcus aureus/isolation & purification , Anti-Bacterial Agents/pharmacology , Bacteremia/microbiology , Gentian Violet/chemistry , Gram-Positive Cocci/drug effects , Gram-Positive Cocci/growth & development , Humans , Microbial Sensitivity Tests , Phenazines/chemistry , Prospective Studies , Sensitivity and Specificity , Staphylococcus aureus/drug effects , Staphylococcus aureus/growth & development
4.
J Int Med Res ; 46(1): 225-233, 2018 Jan.
Article in English | MEDLINE | ID: mdl-28789605

ABSTRACT

Objective This study aimed to investigate the epidemiology and changes in antibacterial susceptibility of children in Shenmu City, northern Shaanxi, and provide a basis for rational drug use. Methods The distribution and drug resistance pattern of pathogenic bacteria isolated from children were retrospectively analysed. Results A total of 573 strains of pathogens were cultivated. A total of 201 (35.07%) strains of Gram-positive cocci and 183 (31.93%) strains of Gram-negative cocci were detected. A total of 189 (32.98%) strains of fungi were detected. The resistance rate of Staphylococcus to penicillin was 100% and that to erythromycin was 90.69%. There were varying degrees of resistance to other drugs, but no single strain had vancomycin resistance. Gram-negative bacilli were generally resistant to ampicillin, but had low resistance to the combined preparation of enzyme inhibitors, quinolones, and aminoglycosides, and were highly sensitive to imipenem and meropenem. Conclusion Gram-negative bacilli are the main pathogens of bacterial infection in the paediatric ward. Strengthening clinical monitoring of bacterial distribution in paediatric clinical isolates and understanding changes in drug resistance are important for guiding the rational use of antibiotics. These measures could also prevent emergence and spreading of resistant strains.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Drug Resistance, Multiple, Bacterial , Fungi/drug effects , Gram-Negative Bacteria/drug effects , Gram-Positive Cocci/drug effects , Ampicillin/therapeutic use , Antifungal Agents/therapeutic use , Child , Child, Preschool , Erythromycin/therapeutic use , Female , Fungi/growth & development , Fungi/isolation & purification , Gram-Negative Bacteria/growth & development , Gram-Negative Bacteria/isolation & purification , Gram-Negative Bacterial Infections/drug therapy , Gram-Negative Bacterial Infections/microbiology , Gram-Positive Bacterial Infections/drug therapy , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/isolation & purification , Humans , Imipenem/therapeutic use , Infant , Infant, Newborn , Male , Meropenem , Microbial Sensitivity Tests , Mycoses/drug therapy , Mycoses/microbiology , Penicillins/therapeutic use , Retrospective Studies , Thienamycins/therapeutic use , Vancomycin/therapeutic use
6.
Antimicrob Agents Chemother ; 60(1): 239-44, 2016 01.
Article in English | MEDLINE | ID: mdl-26482312

ABSTRACT

Gram-positive bacterial infections are an important cause of morbidity and death among cancer patients, despite current therapy. In this case-control study, we evaluated the clinical outcomes and safety of telavancin in cancer patients with uncomplicated Gram-positive bloodstream infections (BSIs). Between March 2011 and May 2013, we enrolled cancer patients with uncomplicated Gram-positive BSIs to receive intravenous telavancin therapy for at least 14 days for Staphylococcus aureus and 7 days for other Gram-positive cocci. Patients with baseline creatinine clearance (CLCR) values of >50 ml/min received 10 mg/kg/day of telavancin, and those with CLCR values between 30 and 49 ml/min received 7.5 mg/kg/day. Patients were compared with a retrospective cohort of 39 historical patients with Gram-positive BSIs, matched for underlying malignancy, infecting organism, and neutropenia status, who had been treated with vancomycin. A total of 78 patients were analyzed, with 39 in each group. The most common pathogen causing BSIs was S. aureus (51%), followed by alpha-hemolytic streptococci (23%), Enterococcus spp. (15%), coagulase-negative staphylococci (8%), and beta-hemolytic streptococci (3%). Sixty-two percent of patients had hematological malignancies, and 38% had solid tumors; 51% of the patients were neutropenic. The overall response rate determined by clinical outcome and microbiological eradication at 72 h following the initiation of therapy, in the absence of relapse, deep-seated infections, and/or infection-related death, was better with telavancin than with vancomycin (86% versus 61%; P = 0.013). Rates of drug-related adverse events were similar in the two groups (telavancin, 31%; vancomycin, 23%; P = 0.79), with similar rates of renal adverse events. Telavancin may provide a useful alternative to standard vancomycin therapy for Gram-positive BSIs in cancer patients. (This study has been registered at ClinicalTrials.gov under registration no. NCT01321879.).


Subject(s)
Aminoglycosides/administration & dosage , Anti-Bacterial Agents/administration & dosage , Bacteremia/drug therapy , Gram-Positive Bacterial Infections/drug therapy , Hematologic Neoplasms/drug therapy , Neutropenia/drug therapy , Acute Kidney Injury/etiology , Acute Kidney Injury/pathology , Adult , Aged , Aged, 80 and over , Aminoglycosides/adverse effects , Anti-Bacterial Agents/adverse effects , Bacteremia/complications , Bacteremia/pathology , Female , Gram-Positive Bacterial Infections/complications , Gram-Positive Bacterial Infections/pathology , Gram-Positive Cocci/drug effects , Gram-Positive Cocci/growth & development , Hematologic Neoplasms/complications , Hematologic Neoplasms/pathology , Humans , Lipoglycopeptides , Male , Microbial Sensitivity Tests , Middle Aged , Neutropenia/complications , Neutropenia/pathology , Pilot Projects , Recurrence , Treatment Outcome , Vancomycin/administration & dosage , Vancomycin/adverse effects
7.
Rev. bras. parasitol. vet ; 23(4): 473-480, Oct-Dec/2014. tab
Article in English | LILACS | ID: lil-731245

ABSTRACT

Blood samples were collected from 99 domestic dogs from the urban and rural areas of the Lábrea municipality, state of Amazonas, Brazil. Canine serum samples were tested by immunofluorescence assay against Rickettsia spp., which revealed that only 3.0% (1/33) and 7.6% (5/66) of the dogs from urban and rural areas, respectively, reacted positively to at least one Rickettsia species. DNA was extracted from canine blood and tested by a battery of PCR assays targeting protozoa of the genera Babesia and Hepatozoon, and bacteria of the genera Rickettsia and Ehrlichia and family Anaplasmataceae. All samples were negative in the PCR assays targeting the genera Babesia, Hepatozoon, Ehrlichia and Rickettsia. For Anaplasmataceae, 3% (1/33) and 39.4% (26/66) of the urban and rural dogs, respectively, yielded amplicons that generated DNA sequences 100% identical to the corresponding sequence of Wolbachia endosymbiont of Dirofilaria immitis. Because of these results, all canine DNA samples were further tested in a PCR assay targeting filarial nematodes, which was positive for 18.2% (6/33) and 57.6% (38/66) urban and rural dogs, respectively. Filarial-PCR products generated DNA sequences 100% identical to D. immitis. While tick-borne infections were rare in Lábrea, D. immitis infection rates were among the highest reported in South America.


Amostras de sangue foram coletadas de 99 cães domésticos de áreas urbana e rural do município de Lábrea, estado do Amazonas. Soros caninos foram testados pela técnica de imunofluorescência indireta contra Rickettsia spp., resultando em apenas 3,0% (1/33) e 7,6% (5/66) de cães soropositivos nas áreas urbana e rural, respectivamente. DNA foi extraído do sangue canino e testado por diferentes protocolos da PCR para detecção de protozoários dos gêneros Babesia e Hepatozoon, e bactérias dos gêneros Rickettsia e Ehrlichia e da família Anaplasmataceae. Todas as amostras foram negativas nos protocolos de PCR para os gêneros Babesia, Hepatozoon, Ehrlichia e Rickettsia. Para Anaplasmataceae, 3% (1/33) e 39,4% (26/66) dos cães de áreas urbana e rural, respectivamente, geraram sequências de DNA 100% idênticas ao endosimbionte Wolbachia de Dirofilaria immitis. Posteriormente, as amostras foram testadas pela PCR para nematódeos filarídeos, resultando em 18,2% (6/33) e 57,6% (38/66) de amostras positivas nas áreas urbana e rural, respectivamente. Os produtos geraram sequências de DNA 100% idênticas a D. immitis. Em contraste com várias outras regiões do Brasil, infecções transmitidas por carrapatos foram raras em Lábrea. Por outro lado, as frequências de infecção por D. immitis estiveram entre as mais altas relatadas na América do Sul.


Subject(s)
Animals , Culture Media , Catalase/analysis , Gram-Positive Cocci/enzymology , Gram-Positive Cocci/isolation & purification , Milk/microbiology , Colistin , Enterococcus/growth & development , Enterococcus/isolation & purification , Ferric Compounds , Gram-Positive Cocci/growth & development , Lactococcus/growth & development , Lactococcus/isolation & purification , Oxolinic Acid , Staphylococcaceae/growth & development , Staphylococcaceae/isolation & purification , Streptococcaceae/growth & development , Streptococcaceae/isolation & purification , Streptococcus/growth & development , Streptococcus/isolation & purification , Thallium
8.
Antimicrob Agents Chemother ; 58(2): 1218-23, 2014.
Article in English | MEDLINE | ID: mdl-24277025

ABSTRACT

We evaluated in vitro activity of ceftolozane-tazobactam (TOL-TAZ), formerly CXA-201, against recent clinical anaerobic isolates with emphasis on the Bacteroides fragilis group. Ceftolozane-tazobactam showed good activity against B. fragilis species and intermediate to limited activity against other species of Bacteroides. Ceftolozane-tazobactam showed very good activity against Prevotella spp., Fusobacterium spp., and Propionibacterium spp., varying activities against Gram-positive cocci, and limited activity against Clostridium spp.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacteroides fragilis/drug effects , Cephalosporins/pharmacology , Penicillanic Acid/analogs & derivatives , Anaerobiosis , Bacteroides fragilis/growth & development , Bacteroides fragilis/isolation & purification , Clostridium/drug effects , Clostridium/growth & development , Clostridium/isolation & purification , Drug Combinations , Fusobacterium/drug effects , Fusobacterium/growth & development , Fusobacterium/isolation & purification , Gram-Negative Bacterial Infections/drug therapy , Gram-Negative Bacterial Infections/microbiology , Gram-Positive Bacterial Infections/drug therapy , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Cocci/drug effects , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/isolation & purification , Humans , Microbial Sensitivity Tests , Penicillanic Acid/pharmacology , Prevotella/drug effects , Prevotella/growth & development , Prevotella/isolation & purification , Propionibacterium/drug effects , Propionibacterium/growth & development , Propionibacterium/isolation & purification , Tazobactam
9.
Nat Rev Microbiol ; 11(9): 601-14, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23949602

ABSTRACT

Bacteria come in a range of shapes, including round, rod-shaped, curved and spiral cells. This morphological diversity implies that different mechanisms exist to guide proper cell growth, division and chromosome segregation. Although the majority of studies on cell division have focused on rod-shaped cells, the development of new genetic and cell biology tools has provided mechanistic insight into the cell cycles of bacteria with different shapes, allowing us to appreciate the underlying molecular basis for their morphological diversity. In this Review, we discuss recent progress that has advanced our knowledge of the complex mechanisms for chromosome segregation and cell division in bacteria which have, deceptively, the simplest possible shape: the cocci.


Subject(s)
Enterococcus/physiology , Gram-Positive Cocci/physiology , Neisseria/physiology , Cell Division/physiology , Cell Wall/metabolism , Cell Wall/physiology , Chromosomes, Bacterial , Enterococcus/cytology , Enterococcus/growth & development , Gram-Positive Cocci/cytology , Gram-Positive Cocci/growth & development , Neisseria/cytology , Neisseria/growth & development , Peptidoglycan/metabolism
10.
Diagn Microbiol Infect Dis ; 76(4): 546-8, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23727512

ABSTRACT

Few labs isolate and perform susceptibility tests on anaerobes; therefore, we studied the differences between 1185 anaerobes isolated from complicated intra-abdominal infections and 470 isolated from moderate to severe diabetic foot infections. They differed markedly in the distribution of species, including Bacteroides fragilis and anaerobic Gram-positive cocci, as well as in resistance patterns, especially to fluoroquinolones.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacteroides fragilis/drug effects , Drug Resistance, Bacterial/physiology , Gram-Positive Cocci/drug effects , Anaerobiosis , Bacteroides Infections/drug therapy , Bacteroides Infections/microbiology , Bacteroides fragilis/growth & development , Bacteroides fragilis/isolation & purification , Diabetic Foot/drug therapy , Diabetic Foot/microbiology , Gram-Positive Bacterial Infections/drug therapy , Gram-Positive Bacterial Infections/microbiology , Gram-Positive Cocci/classification , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/isolation & purification , Humans , Intraabdominal Infections/drug therapy , Intraabdominal Infections/microbiology , Microbial Sensitivity Tests
11.
J Clin Pathol ; 66(3): 243-8, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23268318

ABSTRACT

OBJECTIVE: To study the correlation between the bacteriological and histopathological findings in placentas from women with suspected or proven chorioamnionitis (CA). METHODS: Over a 1-year period, 376 placentas were prospectively collected and processed for bacteriological and pathological studies in cases of confirmed or suspected maternal or neonatal infection. RESULTS: Histological CA was diagnosed in 26.9% of placentas (101/376), and 27.7% (28/101) of these placentas had positive bacteriological cultures. A monomicrobial culture, mainly represented by Gram-positive cocci and Gram-negative bacilli, was identified in 27% of the positive bacterial cultures. The proportion of positive cultures was higher (p=0.03) when CA was associated with funisitis, as compared with placental samples with early CA. In placentas without histological CA, bacteriological cultures were mostly negative (230/275), although pathogenic bacteria were identified in 16.3% of them (45/275). CONCLUSIONS: The histological and bacteriological results were concordant in about 70% of the examined placentas, with 61.1% negative cases (CA absent and negative bacterial cultures), and only 7.4% placentas with positive histological and bacteriological results. Discordant results (positive histology with negative bacteriology) were obtained in placentas with early CA documented by histology although possibly in relation with antibiotic prophylaxis and the presence of fastidious bacteria. Conversely, negative histology with positive bacteriology could be explained by the presence of an early-stage bacterial infection that has not yet led to detectable microscopic lesions.


Subject(s)
Bacterial Infections/diagnosis , Chorioamnionitis/pathology , Culture Techniques/methods , Gram-Negative Bacteria/isolation & purification , Gram-Positive Cocci/isolation & purification , Placenta/microbiology , Pregnancy Complications, Infectious/diagnosis , Adult , Bacterial Infections/microbiology , Chorioamnionitis/microbiology , Female , Gestational Age , Gram-Negative Bacteria/growth & development , Gram-Positive Cocci/growth & development , Humans , Infant, Newborn , Placenta/pathology , Pregnancy , Pregnancy Complications, Infectious/microbiology , Premature Birth , Prospective Studies , Reproducibility of Results , Term Birth
12.
Amino Acids ; 39(5): 1493-505, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20473534

ABSTRACT

Anti-bacterial drug resistance is one of the most critical concerns among the scientist worldwide. The novel antimicrobial decapeptide SD-8 is designed and its minimal inhibitory concentration and therapeutic index (TI) was found in the range of 1-8 µg/ml and 45-360, respectively, against major group of Gram positive pathogens (GPP). The peptide was also found to be least hemolytic at a concentration of 180 µg/ml, i.e., nearly 77 times higher than its average effective concentration. The kinetics assay showed that the killing time is 120 min for methicillin-sensitive Staphylococcus aureus (MSSA) and 90 min for methicillin-resistant S. aureus (MRSA). Membrane permeabilization is the cause of peptide antimicrobial activity as shown by the transmission electron microscopy studies. The peptide showed the anti-inflammatory property by inhibiting COX-2 with a KD and Ki values of 2.36×10(-9) and 4.8×10(-8) M, respectively. The peptide was also found to be effective in vivo as derived from histopathological observations in a Staphylococcal skin infection rat model with MRSA as causative organism.


Subject(s)
Anti-Bacterial Agents/pharmacology , Antimicrobial Cationic Peptides/pharmacology , Drug Resistance, Multiple/drug effects , Gram-Positive Cocci/drug effects , Peptides/pharmacology , Animals , Anti-Bacterial Agents/blood , Anti-Bacterial Agents/chemistry , Antimicrobial Cationic Peptides/blood , Antimicrobial Cationic Peptides/chemistry , Chromatography, High Pressure Liquid , Cyclooxygenase 2/metabolism , Cyclooxygenase 2 Inhibitors/blood , Cyclooxygenase 2 Inhibitors/chemistry , Cyclooxygenase 2 Inhibitors/pharmacology , Disease Models, Animal , Gram-Positive Cocci/growth & development , Hemolysis , Humans , Kinetics , Microbial Sensitivity Tests , Peptides/blood , Peptides/chemistry , Rats , Rats, Wistar , Skin/drug effects , Skin/injuries , Skin/pathology , Solubility , Surface Plasmon Resonance
13.
Food Microbiol ; 26(2): 197-203, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19171263

ABSTRACT

The consumption of citrate by the malolactic bacterium Oenococcus oeni changes the aromatic profile of wines due to the production of volatile compounds such as diacetyl and acetic acid. In this study, the expression of genes related to citrate utilization in the O. oeni strain PSU-1 was investigated to further understand the role of this metabolic pathway in the adaptation to wine environment and its impact on organoleptic qualities. Different conditions of ethanol content (0% and 10%) and pH (3.5 and 4.0) were assayed to evaluate the transcriptional response to both these stress factors. In the presence of ethanol, metabolic and transcriptional behavior was different than the observed when ethanol was absent. The expression of citrate pathway genes was mainly affected by ethanol, while pH showed a lower effect. Among the studied genes, citE, ackA and alsD were the genes revealing a distinctive transcriptional response. The differences observed in gene expression were in correlation with the different content of end products such as acetic acid and diacetyl. The increment of gene expression observed in the presence of ethanol at low pH suggests the participation of citrate metabolism in the response to stress conditions.


Subject(s)
Citric Acid/metabolism , Ethanol/pharmacology , Genes, Bacterial/genetics , Gram-Positive Cocci/metabolism , Hydrogen-Ion Concentration , Wine/microbiology , Base Sequence , Dose-Response Relationship, Drug , Fermentation , Food Microbiology , Gene Expression Regulation, Bacterial , Gram-Positive Cocci/genetics , Gram-Positive Cocci/growth & development , Polymerase Chain Reaction/methods , RNA, Bacterial/chemistry , RNA, Bacterial/genetics , Wine/standards
14.
FEMS Microbiol Lett ; 290(1): 98-104, 2009 Jan.
Article in English | MEDLINE | ID: mdl-19025576

ABSTRACT

Arginine metabolism by wine lactic acid bacteria (LAB) may lead to wine quality degradation. While arginine is essential for growth of the wine relevant LAB Oenococcus oeni, it remains unclear whether it also stimulates its growth. This study evaluated the effect of arginine and citrulline, the partially metabolized intermediate of the arginine deiminase pathway, on the growth of two commercial O. oeni strains in comparison with a Lactobacillus buchneri strain in wine and at wine pH values. Neither arginine nor citrulline increased growth of both O. oeni strains in comparison with the L. buchneri strain. However, arginine and citrulline were partially degraded in all incubations. The extent of citrulline degradation correlated with lower pH values in oenococcal cultivations but with higher pH values in those of the L. buchneri strain. The degradation kinetics of O. oeni and L. buchneri for malic acid and arginine differed and the latter grew in sterile filtered post-malolactic fermentation wine. This study shows that arginine and citrulline did not stimulate growth of the two O. oeni strains studied, and that their physiological role differed among the wine LAB considered. While arginine may play a role in wine microbiological stability, other nutrients should be investigated for their suitability to create a selective ecological advantage for O. oeni strains in wine.


Subject(s)
Arginine/metabolism , Citrulline/metabolism , Gram-Positive Cocci/growth & development , Wine/microbiology , Food Technology , Gram-Positive Cocci/classification , Gram-Positive Cocci/metabolism , Lactobacillus/growth & development , Lactobacillus/metabolism
15.
Microbiology (Reading) ; 154(Pt 9): 2611-2619, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18757795

ABSTRACT

Cyclopropane fatty acid (CFA) synthesis was investigated in Oenococcus oeni. The data obtained demonstrated that acid-grown cells or cells harvested in the stationary growth phase showed changes in fatty acid composition similar to those of ethanol-grown cells. An increase of the CFA content and a decrease of the oleic acid content were observed. The biosynthesis of CFAs from unsaturated fatty acid phospholipids is catalysed by CFA synthases. Quantitative real-time-PCR experiments were performed on the cfa gene of O. oeni, which encodes a putative CFA synthase. The level of cfa transcripts increased when cells were harvested in stationary phase and when cells were grown in the presence of ethanol or at low pH, suggesting transcriptional regulation of the cfa gene under different stress conditions. In contrast to Escherichia coli, only one functional promoter was identified upstream of the cfa gene of O. oeni. The function of the cfa gene was confirmed by complementation of a cfa-deficient E. coli strain. Nevertheless, the complementation remained partial because the conversion percentage of unsaturated fatty acids into CFA of the complemented strain was much lower than that of the wild-type strain. Moreover, a prevalence of cycC19 : 0 was observed in the membrane of the complemented strain. This could be due to a specific affinity of the CFA synthase from O. oeni. In spite of this partial complementation, the complemented strain of E. coli totally recovered its viability after ethanol shock (10 %, v/v) whereas its viability was only partly recovered after an acid shock at pH 3.0.


Subject(s)
Gram-Positive Cocci/enzymology , Gram-Positive Cocci/genetics , Membrane Lipids/metabolism , Methyltransferases/genetics , Bacterial Proteins/genetics , Cloning, Molecular , Cyclopropanes , Escherichia coli/genetics , Ethanol/metabolism , Fatty Acids/biosynthesis , Gene Expression Regulation, Bacterial , Genetic Complementation Test , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/metabolism , Hydrogen-Ion Concentration , Oleic Acid/metabolism , RNA, Bacterial/genetics , Sequence Alignment , Transcription, Genetic
16.
Antimicrob Agents Chemother ; 52(6): 1982-90, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18347114

ABSTRACT

Thirty-one aminocoumarin antibiotics derived from mutasynthesis experiments were investigated for their biological activities. Their inhibitory activities toward Escherichia coli DNA gyrase were determined in two different in vitro assays: an ATPase assay and a DNA supercoiling assay. The assays gave a similar rank order of the activities of the compounds tested, although the absolute 50% inhibitory concentrations (IC(50)s) obtained in each assay were different. To confirm that the compounds also acted as gyrase inhibitors in vivo, reporter gene assays were carried out with E. coli by using gyrA and sulA promoter fusions with the luxCDABE operon. A strong induction of both promoters was observed for those compounds that showed gyrase inhibitory activity in the biochemical assays. Compounds carrying analogs of the prenylated benzoyl moiety (ring A) of clorobiocin that were structurally very different showed high levels of activity both in the biochemical assay and in the reporter gene assay, indicating that the structure of this moiety can be varied considerably without a loss of affinity for bacterial gyrase. The experimentally determined IC(50)s were compared to the binding energies calculated in silico, which indicated that a shift of the pyrrole carboxylic acid moiety from the O-3'' to the O-2'' position of the deoxysugar moiety has a significant impact on the binding mode of the compounds. The aminocoumarin compounds were also investigated for their MICs against different bacterial pathogens. Several compounds showed high levels of activity against staphylococci, including a methicillin-resistant Staphylococcus aureus strain. However, they showed only poor activities against gram-negative strains.


Subject(s)
Aminocoumarins/pharmacology , Anti-Bacterial Agents/pharmacology , Enzyme Inhibitors/pharmacology , Gram-Negative Bacteria/drug effects , Gram-Positive Cocci/drug effects , Topoisomerase II Inhibitors , Adenosine Triphosphatases/metabolism , Aminocoumarins/chemistry , DNA, Superhelical/biosynthesis , DNA, Superhelical/genetics , Enzyme Inhibitors/chemistry , Gram-Negative Bacteria/classification , Gram-Negative Bacteria/growth & development , Gram-Positive Cocci/classification , Gram-Positive Cocci/growth & development , Humans , Inhibitory Concentration 50 , Microbial Sensitivity Tests , Mutation , Novobiocin/analogs & derivatives , Novobiocin/chemistry , Novobiocin/pharmacology
17.
Br J Dermatol ; 158(3): 442-55, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18275522

ABSTRACT

Microbes found on the skin are usually regarded as pathogens, potential pathogens or innocuous symbiotic organisms. Advances in microbiology and immunology are revising our understanding of the molecular mechanisms of microbial virulence and the specific events involved in the host-microbe interaction. Current data contradict some historical classifications of cutaneous microbiota and suggest that these organisms may protect the host, defining them not as simple symbiotic microbes but rather as mutualistic. This review will summarize current information on bacterial skin flora including Staphylococcus, Corynebacterium, Propionibacterium, Streptococcus and Pseudomonas. Specifically, the review will discuss our current understanding of the cutaneous microbiota as well as shifting paradigms in the interpretation of the roles microbes play in skin health and disease.


Subject(s)
Metagenome/immunology , Microbial Viability/immunology , Skin/microbiology , Corynebacterium diphtheriae/immunology , Female , Gram-Positive Bacterial Infections/immunology , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/immunology , Humans , Male , Metagenome/physiology , Propionibacterium acnes/immunology
18.
J Ind Microbiol Biotechnol ; 35(1): 27-33, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17943334

ABSTRACT

This study reports on monitoring Oenococcus oeni intraspecific diversity evolution during winemaking. Three different wines were monitored. The proportion of O. oeni species was determined by species-specific PCR and O. oeni strains were distinguished by multiplex PCR-RAPD. Each strain was tested by PCR for 16 significant markers revealed by a previous genetic comparison between a strong oenological potential strain and one with poor oenological potential. Population levels and diversity changed according to winemaking stages, oenological practices and the chemical properties of the wine. In all situations, O. oeni was the best-adapted species. Within the O. oeni group, intraspecific strain diversity decreased and the malolactic fermentation was the result of the most resistant strains with the highest number of markers.


Subject(s)
Genetic Markers/genetics , Gram-Positive Cocci/classification , Gram-Positive Cocci/growth & development , Wine/microbiology , Bacterial Typing Techniques , DNA, Bacterial/genetics , Fermentation , Gram-Positive Cocci/genetics , Gram-Positive Cocci/isolation & purification , Industrial Microbiology , Malates/metabolism , Polymerase Chain Reaction , Population Dynamics , Random Amplified Polymorphic DNA Technique , Species Specificity , Vitis/microbiology
19.
Microbiology (Reading) ; 153(Pt 12): 4208-4218, 2007 Dec.
Article in English | MEDLINE | ID: mdl-18048934

ABSTRACT

Finegoldia magna is an anaerobic Gram-positive bacterium and commensal, which is also associated with clinically important conditions such as skin and soft tissue infections. This study describes a novel subtilisin-like extracellular serine proteinase of F. magna, denoted SufA (subtilase of Finegoldia magna), which is believed to be the first subtilase described among Gram-positive anaerobic cocci. SufA is associated with the bacterial cell surface, but is also released in substantial amounts during bacterial growth. Papain was used to release SufA from the surface of F. magna and the enzyme was purified by ion-exchange chromatography and gel filtration. A protein band on SDS-PAGE corresponding to the dominating proteolytic activity on gelatin zymography was analysed by MS/MS. Based on the peptide sequences obtained, the sufA gene was sequenced. The gene comprises 3466 bp corresponding to a preprotein of 127 kDa. Like other members of the subtilase family, SufA contains the catalytic triad of aspartic acid, histidine and serine with surrounding conserved residues. A SufA homologue was identified in 33 of 34 investigated isolates of F. magna, as revealed by PCR and immunoprinting. The enzyme forms dimers, which are more proteolytically active than the monomeric protein. SufA was found to efficiently cleave and inactivate the antibacterial peptide LL-37 and the CXC chemokine MIG/CXCL9, indicating that the enzyme promotes F. magna survival and colonization.


Subject(s)
Gram-Positive Cocci/enzymology , Subtilisin , Amino Acid Sequence , Anaerobiosis , Antimicrobial Cationic Peptides/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Chemokine CXCL9/metabolism , Cloning, Molecular , Gram-Positive Cocci/genetics , Gram-Positive Cocci/growth & development , Humans , Molecular Sequence Data , Peptides/chemistry , Sequence Analysis, DNA , Serine Endopeptidases/chemistry , Serine Endopeptidases/genetics , Serine Endopeptidases/isolation & purification , Serine Endopeptidases/metabolism , Subtilisin/chemistry , Subtilisin/genetics , Subtilisin/isolation & purification , Subtilisin/metabolism , Cathelicidins
20.
Rev. argent. microbiol ; 39(4): 243-251, oct.-dic. 2007. ilus, graf, tab
Article in Spanish | LILACS | ID: lil-634565

ABSTRACT

El objetivo principal de esta investigación fue determinar la diversidad bacteriana del proceso de biorremediación de agua contaminada con nafta en un biorreactor de lecho fluidificado en el Recinto Universitario de Mayagüez, de la Universidad de Puerto Rico. El aislamiento y la caracterización de las colonias bacterianas del sistema de biorremediación fueron realizados en medio R2A. Las pruebas morfológicas incluyeron la determinación de la morfología celular y de las colonias, y la reacción frente a la coloración de Gram. Las propiedades fisiológicas se determinaron usando el sistema Biolog® y sobre la base de la habilidad para desarrollar en medio mínimo con nafta como única fuente de carbono. La caracterización molecular se llevó a cabo por BOX-PCR y por análisis de secuencia del ADNr 16S mediante la técnica de ARDRA (amplified ribosomal DNA restriction analysis). De los 162 morfotipos de colonias aislados, 75% fueron bacilos gram-negativos, 19% bacilos gram-positivos, 5% cocos gram-negativos y 1% cocos gram-positivos. Según el análisis ARDRA, estos morfotipos se distribuyeron en 90 grupos genéticos, de los cuales 53% incluyeron cepas con crecimiento en nafta. Las 86 cepas que crecieron en nafta presentaron 52 patrones de amplificación, los que a través de BOX-PCR se agruparon en 50 grupos metabólicamente no relacionados. El alto nivel de diversidad microbiana observado en el reactor permitió la remoción del contaminante y, al parecer, fue importante para la operación estable y eficiente del sistema.


The main objective of this research project was to determine the bacterial diversity during the process of bioremediation of water contaminated with gasoline in a fluidized bed reactor at Mayagüez, PR. Isolation and characterization of bacterial populations from the bioremediation system was performed on R2A medium. Morphological tests included cellular and colonial shape and reaction to Gram coloration. Physiological properties were determined by using carbon utilization profiles (Biolog®) and by the ability of axenic cultures to use gasoline as the sole carbon source. Molecular characterization was performed by BOX-PCR and 16S rDNA sequence analysis (ARDRA). From a total of 162 distinctive isolates, 75% were gram-negative bacilli, 19% gram-positive bacilli, 5% gram-negative cocci and 1% gram-positive cocci. The 162 axenic cultures corresponded to 90 different genetic groups; 53% of which included strains with growth in gasoline as sole carbon source. The 86 strains capable of growing in gasoline corresponded to 52 different amplification patterns in BOX-PCR; which were not metabolically related (Biolog® system). The high degree of microbial diversity in the FBR allowed efficient and stable hydrocarbon removal throughout the operation of the system.


Subject(s)
Bioreactors/microbiology , Fresh Water/microbiology , Gasoline , Gram-Negative Bacteria/isolation & purification , Gram-Positive Bacteria/isolation & purification , Water Pollutants, Chemical/metabolism , Bacterial Typing Techniques , Biodegradation, Environmental , Carbon/metabolism , DNA, Bacterial/analysis , Gram-Negative Bacteria/growth & development , Gram-Negative Bacteria/metabolism , Gram-Positive Bacteria/growth & development , Gram-Positive Bacteria/metabolism , Gram-Positive Cocci/growth & development , Gram-Positive Cocci/isolation & purification , Gram-Positive Cocci/metabolism , Polymerase Chain Reaction , Puerto Rico , Ribotyping , RNA, Bacterial/analysis , Species Specificity
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