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1.
Nat Commun ; 12(1): 5939, 2021 10 12.
Article in English | MEDLINE | ID: mdl-34642328

ABSTRACT

Ubiquitin (Ub) and Ub-like proteins (Ubls) such as NEDD8 are best known for their function as covalent modifiers of other proteins but they are also themselves subject to post-translational modifications including phosphorylation. While functions of phosphorylated Ub (pUb) have been characterized, the consequences of Ubl phosphorylation remain unclear. Here we report that NEDD8 can be phosphorylated at S65 - the same site as Ub - and that S65 phosphorylation affects the structural dynamics of NEDD8 and Ub in a similar manner. While both pUb and phosphorylated NEDD8 (pNEDD8) can allosterically activate the Ub ligase Parkin, they have different protein interactomes that in turn are distinct from those of unmodified Ub and NEDD8. Among the preferential pNEDD8 interactors are HSP70 family members and we show that pNEDD8 stimulates HSP70 ATPase activity more pronouncedly than unmodified NEDD8. Our findings highlight the general importance of Ub/NEDD8 phosphorylation and support the notion that the function of pUb/pNEDD8 does not require their covalent attachment to other proteins.


Subject(s)
HSP70 Heat-Shock Proteins/metabolism , NEDD8 Protein/metabolism , Protein Processing, Post-Translational , Ubiquitin/metabolism , Allosteric Regulation , Amino Acid Sequence , Cloning, Molecular , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , HEK293 Cells , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Humans , Kinetics , NEDD8 Protein/chemistry , NEDD8 Protein/genetics , Phosphorylation , Protein Binding , Protein Interaction Mapping , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Substrate Specificity , Ubiquitin/chemistry , Ubiquitin/genetics , Ubiquitination
2.
Genes (Basel) ; 13(1)2021 12 21.
Article in English | MEDLINE | ID: mdl-35052349

ABSTRACT

The heat shock protein 70 (HSP70) gene family perform a fundamental role in protecting plants against biotic and abiotic stresses. Aquilaria sinensis is a classic stress-induced medicinal plant, producing a valuable dark resin in a wood matrix, known as agarwood, in response to environmental stresses. The HSP70 gene family has been systematic identified in many plants, but there is no comprehensive analysis at the genomic level in A. sinensis. In this study, 15 putative HSP70 genes were identified in A. sinensis through genome-wide bioinformatics analysis. Based on their phylogenetic relationships, the 15 AsHSP70 were grouped into six sub-families that with the conserved motifs and gene structures, and the genes were mapped onto six separate linkage groups. A qRT-PCR analysis showed that the relative expression levels of all the AsHSP70 genes were up-regulated by heat stress. Subcellular localization of all HSP70s was predicted, and three were verified by transiently expressed in Arabidopsis protoplasts. Based on the expression profiles in different tissues and different layers treated with Agar-Wit, we predict AsHSP70 genes are involved in different stages of agarwood formation. The systematic identification and expression analysis of HSP70s gene family imply some of them may play important roles in the formation of agarwood. Our findings not only provide a foundation for further study their biological function in the later research in A. sinensis, but also provides a reference for the analysis of HSPs in other species.


Subject(s)
Genes, Plant , HSP70 Heat-Shock Proteins/genetics , Thymelaeaceae/genetics , Gene Expression Profiling , HSP70 Heat-Shock Proteins/classification , Heat-Shock Response , Phylogeny , Subcellular Fractions/metabolism
3.
Genomics ; 112(6): 4442-4453, 2020 11.
Article in English | MEDLINE | ID: mdl-32739432

ABSTRACT

Heat shock proteins (HSPs) are important elements of the cellular group of molecular chaperones. Specifically, HSP70 proteins protect cells from being damaged when plants are exposed to environmental stresses. These proteins are catalysts that manage the correct folding of other proteins, and they play a key role in the development of tolerance against biotic and abiotic stresses. In the present study, 113 HSP70 genes were retrieved from the available genome assemblies of four cotton species, including Gossypium hirsutum, G. barbadense, G. arboreum, and G. raimondii. The HSP70 genes were clustered into 11 subfamilies based on phylogeny. One hundred and nine (109) gene duplications were found across these four species. Localization of genes revealed that several HSP70 genes reside in the cytoplasm. Synonymous and non-synonymous substitution rates revealed that functional segregation of HSP70 genes in cotton is due to purifying selection. Furthermore, HSP70 genes in cotton are expressed constitutively during developmental stages. These findings are valuable to understand the complex mechanism of HSP70 gene regulation that occurs in signaling pathways in response to plant stress.


Subject(s)
Gossypium/genetics , HSP70 Heat-Shock Proteins/genetics , Multigene Family , Plant Proteins/genetics , Amino Acid Motifs , Chromosome Mapping , Conserved Sequence , Gene Duplication , Genes, Plant , Genome, Plant , Gossypium/metabolism , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/metabolism , Phylogeny , Plant Proteins/chemistry , Plant Proteins/classification , Plant Proteins/metabolism
4.
Parasitol Res ; 119(4): 1337-1351, 2020 Apr.
Article in English | MEDLINE | ID: mdl-32056023

ABSTRACT

Amoebiasis is a human intestinal disease caused by the parasite Entamoeba histolytica. It has been previously demonstrated that E. histolytica heat shock protein 70 (EhHSP70) plays an important role in amoebic pathogenicity by protecting the parasite from the dangerous effects of oxidative and nitrosative stresses. Despite its relevance, this protein has not yet been characterized. In this study, the EhHSP70 genes were cloned, and the two recombinant EhHSP70 proteins were expressed, purifying and biochemically characterized. Additionally, after being subjected to some host stressors, the intracellular distribution of the proteins in the parasite was documented. Two amoebic HSP70 isoforms, EhHSP70-A and EhHSP70-B, with 637 and 656 amino acids, respectively, were identified. Kinetic parameters of ATP hydrolysis showed low rates, which were in accordance with those of the HSP70 family members. Circular dichroism analysis showed differences in their secondary structures but similarities in their thermal stability. Immunocytochemistry in trophozoites detected EhHSP70 in the nuclei and cytoplasm as well as a slight overexpression when the parasites were subjected to oxidants and heat. The structural differences of amoebic HSP70s with their human counterparts may be used to design specific inhibitors to treat human amoebiasis.


Subject(s)
Entamoeba histolytica/genetics , HSP70 Heat-Shock Proteins/genetics , HSP70 Heat-Shock Proteins/metabolism , Protein Isoforms/genetics , Amebiasis/parasitology , Animals , Cell Nucleus , Circular Dichroism , Cloning, Molecular , Cytoplasm/metabolism , Entamoeba histolytica/pathogenicity , HSP70 Heat-Shock Proteins/classification , Humans , Protein Structure, Secondary , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Analysis, Protein , Trophozoites/metabolism
5.
Cell Stress Chaperones ; 24(6): 1187-1195, 2019 11.
Article in English | MEDLINE | ID: mdl-31642046

ABSTRACT

This study was aimed to genetic profiling of heat shock protein 70 (Hsp70) gene in Murrah buffalo investigating 50 unrelated adult animals at ICAR-Research Complex for Eastern Region, Patna (India) in winter, spring, and summer. PCR ready genomic DNA samples and season-wise total RNA samples were prepared. The PCR products of Hsp70 eluted from agarose gel were sequenced and analyzed. The first-strand cDNA was synthesized and concentration was equalized to 25 ng/µl. Expression kinetics of mRNA transcripts in different seasons was studied using Brilliant SYBR Green QPCR technique and the data retrieved was analyzed by least-squares ANOVA. DNA sequencing by primer walking revealed four allelic variants of Hsp70 gene. Alignment study revealed one substitution in 5'UTR, six substitutions in coding region, and one addition in 3'UTR. The highest percent identity and negligible phylogenetic distance were found among the alleles and reference bovine sequences. The relative mRNA expression was significantly higher in summer when THI ≥ 84 than the spring and winter; fold change increased by 4.5 times in summer than the spring whereas found nearly half in winter. These findings can be useful for heat stress management in buffaloes and help in understanding the mechanism of thermo-regulation well.


Subject(s)
Buffaloes , HSP70 Heat-Shock Proteins , Animals , Buffaloes/genetics , Buffaloes/metabolism , Gene Expression , Gene Expression Profiling/methods , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , HSP70 Heat-Shock Proteins/metabolism , Heat-Shock Response , Hot Temperature , India , Seasons , Tropical Climate
6.
Mol Biol Rep ; 46(2): 1941-1954, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30710231

ABSTRACT

Heat shock proteins 70 (Hsp70) constitute a highly conserved protein family of cellular chaperones widely distributed in plants, where they play a fundamental role in response to biotic and abiotic stress. Until now, genome-wide analyses of the Hsp70 gene family have been conducted for some species. However, reports about Hsp70 genes in Nicotiana tabacum are scarce. In this study, we systematically conducted genome-wide identification and expression analysis of the Hsp70 gene family in tobacco, including gene structure, classification, evolutionary relationships, promoters, and transcript levels in response to abiotic stress treatments. In all, 61 Hsp70 members were identified and classified into six groups that were mapped onto 18 chromosomes, where most were distributed on both ends of the chromosome. The conserved structures and motifs of NtHsp70 proteins in the same subfamily were highly consistent. At least 15 pairs of NtHsp70 genes underwent gene duplication by segment and tandem duplications. Most NtHsp70 proteins contained N-terminal hexokinase conserved motifs. Phylogenetic analysis showed that most species expanded according to their own species-specific approach during the evolution of Hsp70s. Tissue-specific expression analysis indicated that all NtHsp70 genes were involved in at least one or more abiotic stress responses, highlighting the wide participation of NtHsp70 genes in environmental adaptation. This is the first genome-wide analysis of Hsp70 in N. tabacum. These results indicate that each NtHsp70 member fulfilled distinct functions in response to various abiotic stresses.


Subject(s)
HSP70 Heat-Shock Proteins/genetics , HSP70 Heat-Shock Proteins/metabolism , Nicotiana/genetics , Evolution, Molecular , Gene Duplication/genetics , Gene Expression Profiling/methods , Gene Expression Regulation, Plant/genetics , Genome-Wide Association Study , HSP70 Heat-Shock Proteins/classification , Molecular Chaperones/genetics , Multigene Family , Phylogeny , Plant Proteins/genetics , Stress, Physiological/genetics , Nicotiana/metabolism
7.
Cell Stress Chaperones ; 24(1): 7-15, 2019 01.
Article in English | MEDLINE | ID: mdl-30478692

ABSTRACT

Hsp70 chaperone systems are very versatile machines present in nearly all living organisms and in nearly all intracellular compartments. They function in many fundamental processes through their facilitation of protein (re)folding, trafficking, remodeling, disaggregation, and degradation. Hsp70 machines are regulated by co-chaperones. J-domain containing proteins (JDPs) are the largest family of Hsp70 co-chaperones and play a determining role functionally specifying and directing Hsp70 functions. Many features of JDPs are not understood; however, a number of JDP experts gathered at a recent CSSI-sponsored workshop in Gdansk (Poland) to discuss various aspects of J-domain protein function, evolution, and structure. In this report, we present the main findings and the consensus reached to help direct future developments in the field of Hsp70 research.


Subject(s)
Evolution, Molecular , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/metabolism , Animals , Disease , HSP70 Heat-Shock Proteins/classification , Humans , Protein Aggregates , Protein Domains , Protein Refolding
8.
Mol Phylogenet Evol ; 114: 212-224, 2017 09.
Article in English | MEDLINE | ID: mdl-28642015

ABSTRACT

Proctophyllodid feather mites (400+ species) are permanent (full-time) symbionts commonly occurring on passerine birds. Phenotypic evolution of these mites appears to be greatly influenced by characters related to reproduction (>87.5% of a total of 32 taxonomically important discrete characters) and male genitalic characters (21.9%). Because sexual selection could the major evolutionary driver in this system, we test the theoretical expectation that genitalic or sexually dimorphic characters should evolve more rapidly and divergently then other characters. We inferred a time-calibrated molecular phylogeny (6 genes, 8571 nt aligned, no missing data) for 133 taxa of proctophyllodid mites and 40 outgroups. Comparisons of the average number of character state changes inferred on 10,696 Bayesian stationary trees indicate that male genitalic or sexually dimorphic characters do not evolve significantly faster than other characters (p=0.537 and p=0.819, respectively). However, among the male genitalic characters, a trait related to the relative length of the aedeagus experienced extremely fast rates of evolution and was detected as a statistical outlier. In this character, the transitions between short, long, and several intermediate states occurred in both directions. In contrast, the evolution of extremely long aedeagi (nearly as long as the body) occurred unidirectionally and irreversibly. This surprising result may be due to constraints imposed by the female spermathecal canal, which, in species where males have extremely long aedeagi, is also very long and may impede pumping sperm by short aedeagi. In proctophyllodid mites, extremely long aedeagi evolved independently five times in five different monophyletic lineages. Several of these lineages were lumped together by taxonomists to form easy-to-distinguish but apparently artificial species-groups. Male genitalic characters, thus, can introduce false synapomorphies that could affect morphology-based phylogenetic inference. For the most species-rich genus, Proctophyllodes, we develop a predictive classification of species-groups that reconciles molecular and morphological data.


Subject(s)
Biological Evolution , Mites/classification , Animals , Bayes Theorem , Electron Transport Complex IV/classification , Electron Transport Complex IV/genetics , Female , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Male , Mites/anatomy & histology , Mites/genetics , Passeriformes/parasitology , Phylogeny , RNA, Ribosomal, 18S/classification , RNA, Ribosomal, 18S/genetics , RNA, Ribosomal, 28S/classification , RNA, Ribosomal, 28S/genetics
9.
Cell Stress Chaperones ; 21(6): 969-981, 2016 11.
Article in English | MEDLINE | ID: mdl-27558691

ABSTRACT

Recent studies have indicated a metabolic temperature sensitivity in both the arcto-boreal krill species Thysanoessa inermis and Thysanoessa raschii that may determine these species' abundance and population persistence at lower latitudes (up to 40° N). T. inermis currently dominates the krill community in the Barents Sea and in the high Arctic Kongsfjord. We aimed to increase the knowledge on the upper thermal limit found in the latter species by estimating the CT50 value (19.7 °C) (critical temperature at which 50 % of animals are reactive) and by linking metabolic rate measurements with molecular approaches. Optical oxygen sensors were used to measure respiration rates in steps of 2 °C (from 0 to 16 °C). To follow the temperature-mediated mechanisms of passive response, i.e., as a proxy for molecular stress, molecular chaperone heat shock protein 70 (Hsp70) sequences were extracted from a transcriptome assembly, and the gene expression kinetics were monitored during an acute temperature exposure to 6 or 10 °C with subsequent recovery at 4 °C. Our results showed upregulation of hsp70 genes, especially the structurally constitutive and mitochondrial isoforms. These findings confirmed the temperature sensitivity of T. inermis and showed that the thermal stress took place before reaching the upper temperature limit estimated by respirometry at 12 °C. This study provides a baseline for further investigations into the thermal tolerances of arcto-boreal Thysanoessa spp. and comparisons with other krill species under different climatic regimes, especially Antarctica.


Subject(s)
Euphausiacea/metabolism , HSP70 Heat-Shock Proteins/metabolism , Amino Acid Sequence , Animals , Euphausiacea/growth & development , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , High-Throughput Nucleotide Sequencing , Kinetics , Phylogeny , Protein Isoforms/classification , Protein Isoforms/genetics , Protein Isoforms/metabolism , RNA/chemistry , RNA/isolation & purification , RNA/metabolism , Sequence Alignment , Sequence Analysis, RNA , Temperature , Transcriptome , Water/chemistry
10.
Article in English | MEDLINE | ID: mdl-26922644

ABSTRACT

The cytosolic 70KDa heat shock proteins (Hsp70s) are widely used as biomarkers of environmental stress in ecological and toxicological studies in fish. Here we analyze teleost genome sequences to show that two genes encoding inducible hsp70s (hsp70-1 and hsp70-2) are likely present in all teleost fish. Phylogenetic and synteny analyses indicate that hsp70-1 and hsp70-2 are distinct paralogs that originated prior to the diversification of the teleosts. The promoters of both genes contain a TATA box and conserved heat shock elements (HSEs), but unlike mammalian HSP70s, both genes contain an intron in the 5' UTR. The hsp70-2 gene has undergone tandem duplication in several species. In addition, many other teleost genome assemblies have multiple copies of hsp70-2 present on separate, small, genomic scaffolds. To verify that these represent poorly assembled tandem duplicates, we cloned the genomic region surrounding hsp70-2 in Fundulus heteroclitus and showed that the hsp70-2 gene copies that are on separate scaffolds in the genome assembly are arranged as tandem duplicates. Real-time quantitative PCR of F. heteroclitus genomic DNA indicates that four copies of the hsp70-2 gene are likely present in the F. heteroclitus genome. Comparison of expression patterns in F. heteroclitus and Gasterosteus aculeatus demonstrates that hsp70-2 has a higher fold increase than hsp70-1 following heat shock in gill but not in muscle tissue, revealing a conserved difference in expression patterns between isoforms and tissues. These data indicate that ecological and toxicological studies using hsp70 as a biomarker in teleosts should take this complexity into account.


Subject(s)
Gene Expression Profiling , Gene Expression Regulation , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/genetics , Heat-Shock Response/genetics , Animals , Fishes , Genomics/methods , HSP70 Heat-Shock Proteins/classification , Phylogeny , RNA, Messenger/genetics , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction
11.
Sci Rep ; 6: 18770, 2016 Jan 06.
Article in English | MEDLINE | ID: mdl-26733092

ABSTRACT

The molecular chaperone heat shock protein A2 (HSPA2), a member of the 70 kDa heat shock protein (HSP70) family, plays an important role in spermatogenesis and male fertility. Although HSPA2 is evolutionarily highly conserved across the metazoan lineages, the observation of striking differences in temperature-sensitive expressions, testicular physiology, spermatogenesis, as well as its role in male fertility indicates that avian and mammalian HSPA2 may exhibit distinct evolutionary trajectory. The present study reports that while mammalian HSPA2 is constrained by intense purifying selection, avian HSPA2 has been subjected to positive selection. The majority of the positively selected amino acid residues fall on the α-helix and ß-sheets of the peptide-binding domain located at the carboxyl-terminal region of the avian HSPA2. The detection of positively selected sites at the helix and ß-sheets, which are less tolerant to molecular adaptation, indicates an important functional consequence and contribution to the structural and functional diversification of the avian HSPA2. Collectively, avian HSPA2 may have an adaptive advantage over the mammals in response to heat stress, and therefore, mammals with testicular descent may be at a greater risk in the event of scrotal temperature rise.


Subject(s)
HSP70 Heat-Shock Proteins/metabolism , Testis/metabolism , Amino Acid Sequence , Animals , Birds/classification , Birds/genetics , Evolution, Molecular , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Male , Mammals , Multigene Family , Phylogeny , Selection, Genetic
12.
Biomed Res Int ; 2015: 510319, 2015.
Article in English | MEDLINE | ID: mdl-26649306

ABSTRACT

Hsp70s (heat shock protein 70s) are a class of molecular chaperones that are highly conserved and ubiquitous in organisms ranging from microorganisms to plants and humans. Most research on Hsp70s has focused on the mechanisms of their functions as molecular chaperones, but recently, studies on stress responses are coming to the forefront. Hsp70s play key roles in cellular development and protecting living organisms from environmental stresses such as heat, drought, salinity, acidity, and cold. Moreover, functions of human Hsp70s are related to diseases including neurological disorders, cancer, and virus infection. In this review, we provide an overview of the specific roles of Hsp70s in response to stress, particularly abiotic stress, in all living organisms.


Subject(s)
HSP70 Heat-Shock Proteins , Stress, Physiological/physiology , Amino Acid Sequence , Animals , Bacterial Physiological Phenomena , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/physiology , Humans , Molecular Sequence Data , Plant Physiological Phenomena , Sequence Alignment
13.
Article in English | MEDLINE | ID: mdl-26033497

ABSTRACT

The gene encoding heat shock protein 70 (HSP70) was identified in Octopus tankahkeei by homologous cloning and rapid amplification of cDNA ends (RACE). The full-length cDNA (2471 bp) consists of a 5'-untranslated region (UTR) (89 bp), a 3'-UTR (426 bp), and an open reading frame (1956 bp) that encodes 651 amino acid residues with a predicted molecular mass of 71.8 kDa and an isoelectric point of 5.34. Based on the amino acid sequence analysis and multiple sequence alignment, this cDNA is a member of cytoplasmic hsp70 subfamily of the hsp70 family and was designated as ot-hsp70. Tissue expression analysis showed that HSP70 expression is highest in the testes when all examined organs were compared. Immunohistochemistry analysis, together with hematoxylin-eosin staining, revealed that the HSP70 protein was expressed in all spermatogenic cells, but not in fibroblasts. In addition, O. tankahkeei were heat challenged by exposure to 32 °C seawater for 2 h, then returned to 13 °C for various recovery time (0-24 h). Relative expression of ot-hsp70 mRNA in the testes was measured at different time points post-challenge by quantitative real-time PCR. A clear time-dependent mRNA expression of ot-hsp70 after thermal stress indicates that the HSP70 gene is inducible. Ultrastructural changes of the heat-stressed testis were observed by transmission electron microscopy. We suggest that HSP70 plays an important role in spermatogenesis and testis protection against thermal stress in O. tankahkeei.


Subject(s)
HSP70 Heat-Shock Proteins/metabolism , Octopodiformes/physiology , Stress, Physiological , Temperature , Testis/metabolism , Amino Acid Sequence , Animals , Base Sequence , DNA , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Male , Molecular Sequence Data , Phylogeny , RNA, Messenger/genetics , Seawater , Sequence Homology, Amino Acid
14.
Gene ; 543(2): 275-85, 2014 Jun 15.
Article in English | MEDLINE | ID: mdl-24726551

ABSTRACT

In this study, a full-length HSP70 cDNA from Paphia undulata was cloned using reverse transcriptase polymerase chain reaction (RT-PCR) coupled with rapid amplification of cDNA ends (RACE). The full-length cDNA is 2,351 bp, consisting of a 5'-untranslated region (UTR) of 83 bp, a 3'-UTR of 315 bp, and an open reading frame (ORF) of 1,953 bp. This cDNA encodes 650 amino acids with an estimated molecular weight of 71.3 kDa and an isoelectric point of 5.51. Based on the amino acid sequence analysis and phylogenetic analysis, this HSP70 gene was identified as a member of the cytoplasmic HSP70 family, being the constitutive expression, and it was designated as PuHSC70. The distribution of PuHSC70 mRNA in the mantle, digestive gland, adductor muscle, gonad, gill, heart, and hemocytes suggested that PuHSC70 is ubiquitously expressed. The mRNA levels of PuHSC70 under high temperature and high salinity stresses were analyzed by real-time PCR. Under high temperature stress of 32°C, PuHSC70 mRNA in the mantle, digestive gland, gill, and heart was significantly up-regulated at 1h and 2h, and it was then progressively down-regulated. In the adductor muscle, the level of PuHSC70 mRNA gradually increased throughout the study period; the mRNA levels in the gonad and hemocytes increased significantly at 4h and 8h (P<0.05) and then decreased at 8h and 14 h, respectively, however they increased again afterwards, reaching the highest levels at 50h. Under high salinity (32 ‰) stress, the mRNA levels of PuHSC70 in the mantle and gonad were increased significantly only at 24h and 48 h (P<0.05), and at the rest of the study period they were slightly elevated. Compared with the pretreatment level, the levels of expression in the digestive gland and gill were unchanged or reduced throughout the study period. The levels of PuHSC70 mRNA in the adductor muscle, hemocytes, and heart were significantly increased, reaching a maximum at 24h, and then they gradually decreased; moreover, in the heart, the mRNA expression recovered to the pretreatment level at 50h; while in the adductor muscle and hemocytes, the expression level remained higher than that of the control. The cloning and expression analyses of PuHSC70 provide theoretical basis to further study the mechanism of physiological response to thermal and high salinity stresses.


Subject(s)
Bivalvia/metabolism , HSP70 Heat-Shock Proteins/metabolism , Amino Acid Sequence , Animals , Bivalvia/genetics , Cloning, Molecular , Cytosol/metabolism , Gene Expression , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Molecular Sequence Data , Phylogeny , Salt Tolerance , Stress, Physiological
15.
Genome Biol Evol ; 5(12): 2460-77, 2013.
Article in English | MEDLINE | ID: mdl-24277689

ABSTRACT

Hsp70 molecular chaperones are ubiquitous. By preventing aggregation, promoting folding, and regulating degradation, Hsp70s are major factors in the ability of cells to maintain proteostasis. Despite a wealth of functional information, little is understood about the evolutionary dynamics of Hsp70s. We undertook an analysis of Hsp70s in the fungal clade Ascomycota. Using the well-characterized 14 Hsp70s of Saccharomyces cerevisiae, we identified 491 orthologs from 53 genomes. Saccharomyces cerevisiae Hsp70s fall into seven subfamilies: four canonical-type Hsp70 chaperones (SSA, SSB, KAR, and SSC) and three atypical Hsp70s (SSE, SSZ, and LHS) that play regulatory roles, modulating the activity of canonical Hsp70 partners. Each of the 53 surveyed genomes harbored at least one member of each subfamily, and thus establishing these seven Hsp70s as units of function and evolution. Genomes of some species contained only one member of each subfamily that is only seven Hsp70s. Overall, members of each subfamily formed a monophyletic group, suggesting that each diversified from their corresponding ancestral gene present in the common ancestor of all surveyed species. However, the pattern of evolution varied across subfamilies. At one extreme, members of the SSB subfamily evolved under concerted evolution. At the other extreme, SSA and SSC subfamilies exhibited a high degree of copy number dynamics, consistent with a birth-death mode of evolution. KAR, SSE, SSZ, and LHS subfamilies evolved in a simple divergent mode with little copy number dynamics. Together, our data revealed that the evolutionary history of this highly conserved and ubiquitous protein family was surprising complex and dynamic.


Subject(s)
Adenosine Triphosphatases/genetics , Fungal Proteins/genetics , HSP70 Heat-Shock Proteins/genetics , Mitochondrial Proteins/genetics , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae/genetics , Adenosine Triphosphatases/classification , Amino Acid Sequence , Base Sequence , Evolution, Molecular , Fungal Proteins/classification , Genes, Fungal , Genetic Variation , HSP70 Heat-Shock Proteins/classification , Mitochondrial Proteins/classification , Multigene Family , Phylogeny , Saccharomyces cerevisiae Proteins/classification , Sequence Alignment , Sequence Homology, Amino Acid
16.
PLoS One ; 8(6): e65269, 2013.
Article in English | MEDLINE | ID: mdl-23750249

ABSTRACT

BACKGROUND: Gonad differentiation is one of the most important developmental events in vertebrates. Some heat shock proteins are associated with gonad development. Heat shock protein 70 (Hsp70) in the teleost fish and its roles in sex differentiation are poorly understood. METHODS AND FINDINGS: We have identified a testis-enriched heat shock protein Hspa8b2 in the swamp eel using Western blot analysis and Mass Spectrometry (MS). Fourteen Hsp70 family genes were further identified in this species based on transcriptome information. The phylogenetic tree of Hsp70 family was constructed using the Maximum Likelihood method and their expression patterns in the swamp eel gonads were analyzed by reverse transcription-polymerase chain reaction (RT-PCR). CONCLUSION: There are fourteen gene members in the Hsp70 family in the swamp eel genome. Hsp70 family, particularly Hspa8, has expanded in the species. One of the family members Hspa8b2 is predominantly expressed in testis of the swamp eel.


Subject(s)
HSP70 Heat-Shock Proteins/genetics , Multigene Family/genetics , Smegmamorpha/genetics , Testis/metabolism , Amino Acid Sequence , Animals , Conserved Sequence , Evolution, Molecular , Gene Dosage , Gene Expression Profiling , HSP70 Heat-Shock Proteins/chemistry , HSP70 Heat-Shock Proteins/classification , Humans , Male , Mice , Phylogeny , Protein Structure, Tertiary , Rats , Smegmamorpha/growth & development , Testis/growth & development
17.
Protist ; 163(2): 284-95, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21803651

ABSTRACT

An increasing amount of data has revealed the importance of inducible promoters in ciliate research and in ciliate-related industries. However, knowledge about these promoters and related genes is relatively sparse. Here we report a novel inducible promoter from a Tetrahymena cytoplasmic Hsp70 gene member, HSP70-2. The reported promoter was able to induce the endogenous gene up to ∼9000-fold after a short heat shock treatment and this remarkable feature has been retained when a relatively short region of the promoter was introduced into a reporter construct followed by transformation. During the recovery period following a short heat shock, both the mRNA and protein levels of the reporter gene were maintained high up to two hours. A constant heat shock treatment to the transformed cells led to a stabilization of the reporter mRNA up to at least six hours and the reporter protein continued to accumulate up to around three hours. The promoter strength appears to be similar to that of the cadmium-induced metallothionein gene (MTT1) promoter. Therefore, the HSP70-2 promoter represents an attractive alternative for the over-expression of proteins in Tetrahymena, and the promoter-reporter gene construct used in this study is an ideal tool to help in understanding the regulation mechanisms of heat shock genes in ciliates.


Subject(s)
Gene Expression Regulation , HSP70 Heat-Shock Proteins/genetics , Heat-Shock Response , Promoter Regions, Genetic , Tetrahymena thermophila/genetics , Blotting, Northern , Blotting, Western , Cytoplasm/genetics , Cytoplasm/metabolism , Genes, Protozoan , Genes, Reporter , Genetic Vectors/genetics , Genetic Vectors/metabolism , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/metabolism , Molecular Weight , Phylogeny , Plasmids/genetics , Plasmids/metabolism , Protein Biosynthesis , RNA, Messenger/genetics , RNA, Messenger/metabolism , Temperature , Tetrahymena thermophila/classification , Tetrahymena thermophila/metabolism , Time Factors , Transcription, Genetic , Transformation, Genetic
18.
Cell Stress Chaperones ; 16(1): 69-80, 2011 Jan.
Article in English | MEDLINE | ID: mdl-20821176

ABSTRACT

Unicellular photosynthetic dinoflagellates of the genus Symbiodinium are the most common endosymbionts of reef-building scleractinian corals, living in a symbiotic partnership known to be highly susceptible to environmental changes such as hyperthermic stress. In this study, we identified members of two major heat shock proteins (HSPs) families, Hsp70 and Hsp90, in Symbiodinium sp. (clade C) with full-length sequences that showed the highest similarity and evolutionary relationship with other known HSPs from dinoflagellate protists. Regulation of HSPs gene expression was examined in samples of the scleractinian coral Acropora millepora subjected to elevated temperatures progressively over 18 h (fast) and 120 h (gradual thermal stress). Moderate to severe heat stress at 26°C and 29°C (+3°C and +6°C above average sea temperature) resulted in an increase in algal Hsp70 gene expression from 39% to 57%, while extreme heat stress (+9°C) reduced Hsp70 transcript abundance by 60% (after 18 h) and 70% (after 120 h). Elevated temperatures decreased an Hsp90 expression under both rapid and gradual heat stress scenarios. Comparable Hsp70 and Hsp90 gene expression patterns were observed in Symbiodinium cultures and in hospite, indicating their independent regulation from the host. Differential gene expression profiles observed for Hsp70 and Hsp90 suggests diverse roles of these molecular chaperones during heat stress response. Reduced expression of the Hsp90 gene under heat stress can indicate a reduced role in inhibiting the heat shock transcription factor which may lead to activation of heat-inducible genes and heat acclimation.


Subject(s)
Anthozoa/metabolism , Dinoflagellida/metabolism , Gene Expression Profiling , HSP70 Heat-Shock Proteins/metabolism , HSP90 Heat-Shock Proteins/metabolism , Animals , Anthozoa/genetics , Base Sequence , Dinoflagellida/genetics , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , HSP90 Heat-Shock Proteins/classification , HSP90 Heat-Shock Proteins/genetics , Molecular Sequence Data , Phylogeny , Symbiosis , Temperature , Time Factors
19.
FEBS Lett ; 585(1): 231-9, 2011 Jan 03.
Article in English | MEDLINE | ID: mdl-21130768

ABSTRACT

In this study, we identified and functionally characterized the mitochondrial heat shock protein 70 (mtHsp70). Over-expression of mtHsp70 suppressed heat- and H(2)O(2)-induced programmed cell death (PCD) in rice protoplasts, as reflected by higher cell viability, decreased DNA laddering and chromatin condensation. Mitochondrial membrane potential (Δψ(m)) after heat shock was destroyed gradually in protoplasts, but mtHsp70 over-expression showed higher Δψ(m) relative to the vector control cells, and partially inhibited cytochrome c release from mitochondria to cytosol. Heat treatment also significantly increased reactive oxygen species (ROS) generation, a phenomenon not observed in protoplasts over-expressing mtHsp70. Together, these results suggest that mtHsp70 may suppress PCD in rice protoplasts by maintaining mitochondrial Δψ(m) and inhibiting the amplification of ROS.


Subject(s)
Apoptosis , HSP70 Heat-Shock Proteins/metabolism , Oryza/metabolism , Plant Proteins/metabolism , Blotting, Western , Cell Survival , Chromatin/metabolism , DNA Fragmentation , Gene Expression Regulation, Plant , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Hot Temperature , Hydrogen Peroxide/pharmacology , In Situ Nick-End Labeling , Membrane Potential, Mitochondrial , Microscopy, Fluorescence , Oryza/cytology , Oryza/genetics , Oxidants/pharmacology , Phylogeny , Plant Proteins/genetics , Plants, Genetically Modified , Protoplasts/cytology , Protoplasts/drug effects , Protoplasts/metabolism , Reactive Oxygen Species/metabolism , Reverse Transcriptase Polymerase Chain Reaction
20.
Cell Stress Chaperones ; 15(3): 259-70, 2010 May.
Article in English | MEDLINE | ID: mdl-19777376

ABSTRACT

Whereas the consequences of global warming at population or community levels are well documented, studies at the cellular level are still scarce. The study of the physiological or metabolic effects of such small increases in temperature (between +2 degrees C and +6 degrees C) is difficult because they are below the amplitude of the daily or seasonal thermal variations occurring in most environments. In contrast, subterranean biotopes are highly thermally buffered (+/-1 degrees C within a year), and underground water organisms could thus be particularly well suited to characterise cellular responses of global warming. To this purpose, we studied genes encoding chaperone proteins of the HSP70 family in amphipod crustaceans belonging to the ubiquitous subterranean genus Niphargus. An HSP70 sequence was identified in eight populations of two complexes of species of the Niphargus genus (Niphargus rhenorhodanensis and Niphargus virei complexes). Expression profiles were determined for one of these by reverse transcription and quantitative polymerase chain reaction, confirming the inducible nature of this gene. An increase in temperature of 2 degrees C seemed to be without effect on N. rhenorhodanensis physiology, whereas a heat shock of +6 degrees C represented an important thermal stress for these individuals. Thus, this study shows that although Niphargus individuals do not undergo any daily or seasonal thermal variations in underground water, they display an inducible HSP70 heat shock response. This controlled laboratory-based physiological experiment constitutes a first step towards field investigations of the cellular consequences of global warming on subterranean organisms.


Subject(s)
Amphipoda , Global Warming , Greenhouse Effect , HSP70 Heat-Shock Proteins/metabolism , Water Supply , Amino Acid Sequence , Amphipoda/genetics , Amphipoda/metabolism , Animals , Base Sequence , Gene Expression , HSP70 Heat-Shock Proteins/classification , HSP70 Heat-Shock Proteins/genetics , Humans , Molecular Sequence Data , Phylogeny , RNA/analysis , Sequence Alignment
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