Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 146
Filter
1.
ACS Infect Dis ; 10(5): 1664-1678, 2024 May 10.
Article in English | MEDLINE | ID: mdl-38686397

ABSTRACT

In this study, we have identified and optimized two lead structures from an in-house screening, with promising results against the parasitic flatworm Schistosoma mansoni and its target protease S. mansoni cathepsin B1 (SmCB1). Our correlation analysis highlighted the significance of physicochemical properties for the compounds' in vitro activities, resulting in a dual approach to optimize the lead structures, regarding both phenotypic effects in S. mansoni newly transformed schistosomula (NTS), adult worms, and SmCB1 inhibition. The optimized compounds from both approaches ("phenotypic" vs "SmCB1" approach) demonstrated improved efficacy against S. mansoni NTS and adult worms, with 2h from the "SmCB1" approach emerging as the most potent compound. 2h displayed nanomolar inhibition of SmCB1 (Ki = 0.050 µM) while maintaining selectivity toward human off-target cathepsins. Additionally, the greatly improved efficacy of compound 2h toward S. mansoni adults (86% dead worms at 10 µM, 68% at 1 µM, 35% at 0.1 µM) demonstrates its potential as a new therapeutic agent for schistosomiasis, underlined by its improved permeability.


Subject(s)
Cathepsin B , Schistosoma mansoni , Schistosoma mansoni/drug effects , Schistosoma mansoni/enzymology , Schistosoma mansoni/genetics , Animals , Cathepsin B/antagonists & inhibitors , Cathepsin B/metabolism , Schistosomiasis mansoni/drug therapy , Drug Design , Humans , Phenotype , Structure-Activity Relationship , Anthelmintics/pharmacology , Anthelmintics/chemistry , Helminth Proteins/antagonists & inhibitors
2.
Molecules ; 27(4)2022 Feb 19.
Article in English | MEDLINE | ID: mdl-35209202

ABSTRACT

Schistosomiasis is a neglected tropical disease affecting more than 200 million people worldwide. Chemotherapy relies on one single drug, praziquantel, which is safe but ineffective at killing larval stages of this parasite. Furthermore, concerns have been expressed about the rise in resistance against this drug. In the absence of an antischistosomal vaccine, it is, therefore, necessary to develop new drugs against the different species of schistosomes. Protein kinases are important molecules involved in key cellular processes such as signaling, growth, and differentiation. The kinome of schistosomes has been studied and the suitability of schistosomal protein kinases as targets demonstrated by RNA interference studies. Although protein kinase inhibitors are mostly used in cancer therapy, e.g., for the treatment of chronic myeloid leukemia or melanoma, they are now being increasingly explored for the treatment of non-oncological conditions, including schistosomiasis. Here, we discuss the various approaches including screening of natural and synthetic compounds, de novo drug development, and drug repurposing in the context of the search for protein kinase inhibitors against schistosomiasis. We discuss the status quo of the development of kinase inhibitors against schistosomal serine/threonine kinases such as polo-like kinases (PLKs) and mitogen-activated protein kinases (MAP kinases), as well as protein tyrosine kinases (PTKs).


Subject(s)
Anthelmintics/therapeutic use , Drug Repositioning , Helminth Proteins/antagonists & inhibitors , Protein Kinase Inhibitors/therapeutic use , Protein Serine-Threonine Kinases/antagonists & inhibitors , Protein-Tyrosine Kinases/antagonists & inhibitors , Schistosoma/enzymology , Schistosomiasis , Animals , Helminth Proteins/metabolism , Humans , Protein Serine-Threonine Kinases/metabolism , Protein-Tyrosine Kinases/metabolism , Schistosomiasis/drug therapy , Schistosomiasis/enzymology
3.
Development ; 149(3)2022 02 01.
Article in English | MEDLINE | ID: mdl-35067712

ABSTRACT

The regenerative ability of planarians relies on their adult pluripotent stem cell population. Although all stem cells express a piwi homolog, recently it has become possible to classify the piwi+ stem cell population into specialized subpopulations according to the expression of genes related to differentiation. However, piwi+ stem cells behave practically as a homogeneous population after amputation, during which stem cells show accelerated proliferation, named 'induced hyperproliferation'. Here, we show that plac8-A was expressed in almost all of the stem cells, and that a decrease of the plac8-A expression level led to induced hyperproliferation uniformly in a broad stem cell subpopulation after amputation. This reduction of plac8-A expression was caused by activated JNK signaling after amputation. Pharmacological inhibition of JNK signaling caused failure to induce hyperproliferation and resulted in regenerative defects. Such defects were abrogated by simultaneous knockdown of plac8-A expression. Thus, JNK-dependent suppression of plac8-A expression is indispensable for stem cell dynamics involved in regeneration. These findings suggest that plac8-A acts as a molecular switch of piwi+ stem cells for entry into the regenerative state after amputation.


Subject(s)
Helminth Proteins/genetics , Planarians/physiology , Regeneration/physiology , Animals , Argonaute Proteins/genetics , Argonaute Proteins/metabolism , Cell Proliferation , Down-Regulation , Helminth Proteins/antagonists & inhibitors , Helminth Proteins/metabolism , MAP Kinase Signaling System , Pluripotent Stem Cells/cytology , Pluripotent Stem Cells/metabolism , RNA Interference , RNA, Double-Stranded/metabolism
4.
PLoS Negl Trop Dis ; 15(11): e0009898, 2021 11.
Article in English | MEDLINE | ID: mdl-34731172

ABSTRACT

Given the worldwide burden of neglected tropical diseases, there is ongoing need to develop novel anthelmintic agents to strengthen the pipeline of drugs to combat these burdensome infections. Many diseases caused by parasitic flatworms are treated using the anthelmintic drug praziquantel (PZQ), employed for decades as the key clinical agent to treat schistosomiasis. PZQ activates a flatworm transient receptor potential (TRP) channel within the melastatin family (TRPMPZQ) to mediate sustained Ca2+ influx and worm paralysis. As a druggable target present in many parasitic flatworms, TRPMPZQ is a promising target for a target-based screening campaign with the goal of discovering novel regulators of this channel complex. Here, we have optimized methods to miniaturize a Ca2+-based reporter assay for Schistosoma mansoni TRPMPZQ (Sm.TRPMPZQ) activity enabling a high throughput screening (HTS) approach. This methodology will enable further HTS efforts against Sm.TRPMPZQ as well as other flatworm ion channels. A pilot screen of ~16,000 compounds yielded a novel activator of Sm.TRPMPZQ, and numerous potential blockers. The new activator of Sm.TRPMPZQ represented a distinct chemotype to PZQ, but is a known chemical entity previously identified by phenotypic screening. The fact that a compound prioritized from a phenotypic screening campaign is revealed to act, like PZQ, as an Sm.TRPMPZQ agonist underscores the validity of TRPMPZQ as a druggable target for antischistosomal ligands.


Subject(s)
Anthelmintics/pharmacology , Helminth Proteins/antagonists & inhibitors , Praziquantel/pharmacology , Schistosoma mansoni/metabolism , Schistosomiasis mansoni/parasitology , Transient Receptor Potential Channels/antagonists & inhibitors , Animals , Anthelmintics/chemistry , Calcium/metabolism , Drug Evaluation, Preclinical , Female , Helminth Proteins/genetics , Helminth Proteins/metabolism , Humans , Male , Mice , Praziquantel/chemistry , Schistosoma mansoni/drug effects , Schistosoma mansoni/genetics , Schistosomiasis mansoni/drug therapy , Schistosomiasis mansoni/metabolism , Transient Receptor Potential Channels/genetics , Transient Receptor Potential Channels/metabolism
5.
Cell Rep ; 37(1): 109776, 2021 10 05.
Article in English | MEDLINE | ID: mdl-34610311

ABSTRACT

PIWI proteins are known as mediators of transposon silencing in animal germlines but are also found in adult pluripotent stem cells of highly regenerative animals, where they are essential for regeneration. Study of the nuclear PIWI protein SMEDWI-2 in the planarian somatic stem cell system reveals an intricate interplay between transposons and cell differentiation in which a subset of transposons is inevitably activated during cell differentiation, and the PIWI protein is required to regain control. Absence of SMEDWI-2 leads to tissue-specific transposon derepression related to cell-type-specific chromatin remodeling events and in addition causes reduced accessibility of lineage-specific genes and defective cell differentiation, resulting in fatal tissue dysfunction. Finally, we show that additional PIWI proteins provide a stem-cell-specific second layer of protection in planarian neoblasts. These findings reveal a far-reaching role of PIWI proteins and PIWI-interacting RNAs (piRNAs) in stem cell biology and cell differentiation.


Subject(s)
Cell Differentiation , DNA Transposable Elements/genetics , RNA, Small Interfering/metabolism , Animals , Argonaute Proteins/antagonists & inhibitors , Argonaute Proteins/genetics , Argonaute Proteins/metabolism , Chromatin/metabolism , Chromatin Assembly and Disassembly , Helminth Proteins/antagonists & inhibitors , Helminth Proteins/genetics , Helminth Proteins/metabolism , Intestines/metabolism , Planarians/cytology , Pluripotent Stem Cells/cytology , Pluripotent Stem Cells/metabolism , RNA Interference , RNA, Small Interfering/genetics
6.
Molecules ; 26(9)2021 Apr 28.
Article in English | MEDLINE | ID: mdl-33925246

ABSTRACT

Histone-modifying proteins have been identified as promising targets to treat several diseases including cancer and parasitic ailments. In silico methods have been incorporated within a variety of drug discovery programs to facilitate the identification and development of novel lead compounds. In this study, we explore the binding modes of a series of benzhydroxamates derivatives developed as histone deacetylase inhibitors of Schistosoma mansoni histone deacetylase (smHDAC) using molecular docking and binding free energy (BFE) calculations. The developed docking protocol was able to correctly reproduce the experimentally established binding modes of resolved smHDAC8-inhibitor complexes. However, as has been reported in former studies, the obtained docking scores weakly correlate with the experimentally determined activity of the studied inhibitors. Thus, the obtained docking poses were refined and rescored using the Amber software. From the computed protein-inhibitor BFE, different quantitative structure-activity relationship (QSAR) models could be developed and validated using several cross-validation techniques. Some of the generated QSAR models with good correlation could explain up to ~73% variance in activity within the studied training set molecules. The best performing models were subsequently tested on an external test set of newly designed and synthesized analogs. In vitro testing showed a good correlation between the predicted and experimentally observed IC50 values. Thus, the generated models can be considered as interesting tools for the identification of novel smHDAC8 inhibitors.


Subject(s)
Helminth Proteins/chemistry , Histone Deacetylase Inhibitors/chemistry , Histone Deacetylases/chemistry , Quantitative Structure-Activity Relationship , Schistosoma mansoni/enzymology , Animals , Dose-Response Relationship, Drug , Helminth Proteins/antagonists & inhibitors , Histone Deacetylase Inhibitors/pharmacology , Molecular Conformation , Molecular Docking Simulation , Molecular Dynamics Simulation , Protein Binding , Reproducibility of Results
7.
PLoS Pathog ; 17(2): e1008982, 2021 02.
Article in English | MEDLINE | ID: mdl-33544769

ABSTRACT

In the absence of efficient alternative strategies, the control of parasitic nematodes, impacting human and animal health, mainly relies on the use of broad-spectrum anthelmintic compounds. Unfortunately, most of these drugs have a limited single-dose efficacy against infections caused by the whipworm, Trichuris. These infections are of both human and veterinary importance. However, in contrast to a wide range of parasitic nematode species, the narrow-spectrum anthelmintic oxantel has a high efficacy on Trichuris spp. Despite this knowledge, the molecular target(s) of oxantel within Trichuris is still unknown. In the distantly related pig roundworm, Ascaris suum, oxantel has a small, but significant effect on the recombinant homomeric Nicotine-sensitive ionotropic acetylcholine receptor (N-AChR) made up of five ACR-16 subunits. Therefore, we hypothesized that in whipworms, a putative homolog of an ACR-16 subunit, can form a functional oxantel-sensitive receptor. Using the pig whipworm T. suis as a model, we identified and cloned a novel ACR-16-like subunit and successfully expressed the corresponding homomeric channel in Xenopus laevis oocytes. Electrophysiological experiments revealed this receptor to have distinctive pharmacological properties with oxantel acting as a full agonist, hence we refer to the receptor as an O-AChR subtype. Pyrantel activated this novel O-AChR subtype moderately, whereas classic nicotinic agonists surprisingly resulted in only minor responses. We observed that the expression of the ACR-16-like subunit in the free-living nematode Caenorhabditis elegans conferred an increased sensitivity to oxantel of recombinant worms. We demonstrated that the novel Tsu-ACR-16-like receptor is indeed a target for oxantel, although other receptors may be involved. These finding brings new insight into the understanding of the high sensitivity of whipworms to oxantel, and highlights the importance of the discovery of additional distinct receptor subunit types within Trichuris that can be used as screening tools to evaluate the effect of new synthetic or natural anthelmintic compounds.


Subject(s)
Antinematodal Agents/pharmacology , Helminth Proteins/antagonists & inhibitors , Pyrantel/analogs & derivatives , Receptors, Cholinergic/chemistry , Trichuriasis/drug therapy , Trichuris/drug effects , Animals , Caenorhabditis elegans/drug effects , Female , Helminth Proteins/classification , Helminth Proteins/metabolism , Male , Pyrantel/pharmacology , Receptors, Cholinergic/classification , Receptors, Cholinergic/metabolism , Swine , Trichuriasis/metabolism , Trichuriasis/parasitology , Xenopus laevis/metabolism
8.
Med Chem ; 17(4): 332-343, 2021.
Article in English | MEDLINE | ID: mdl-32242785

ABSTRACT

BACKGROUND: The 26kDa glutathione transferase (GST, EC 2.5.1.18) from Schistosoma japonicum (SjGST) is recognized as the major detoxification enzyme of S. japonicum, a pathogenic helminth causing schistosomiasis. OBJECTIVE: In the present study, the interaction of the chlorotriazine dye Cibacron blue 3GA (CB3GA) and its structural analogues with SjGST was investigated. The work aimed to shed light on the non-substrate ligand-binding properties of the enzyme. METHODS: Kinetic inhibition analysis, affinity labelling experiments and molecular modelling studies were employed. RESULTS: The results showed that CB3GA is a potent inhibitor (IC50 0.057 ± 0.003 µM) towards SjGST. The enzyme was specifically and irreversibly inactivated by the dichlorotriazine-analogue of CB3GA (IC50 0.190 ± 0.024 µM), following a biphasic pseudo-first-order saturation kinetics with approximately 1 mol of inhibitor per mol of the dimeric enzyme being incorporated. All other monochlorotriazine analogues behave as reversible inhibitors with lower inhibition potency (IC50 5.2-82.3 µM). Kinetic inhibition studies, together with molecular modelling and molecular dynamics simulations, established that the CB3GA binding site overlaps both the G- and H-sites. Both hydrophobic/ polar interactions, as well as steric effects, have decisive roles in determining the inhibitory strength of CB3GA and its analogues. CONCLUSION: The results of the present study might be useful in future drug design and development efforts towards SjGST.


Subject(s)
Glutathione Transferase/metabolism , Helminth Proteins/metabolism , Schistosoma japonicum/enzymology , Triazines/metabolism , Animals , Enzyme Assays , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/metabolism , Glutathione Transferase/antagonists & inhibitors , Glutathione Transferase/chemistry , Helminth Proteins/antagonists & inhibitors , Helminth Proteins/chemistry , Kinetics , Ligands , Molecular Docking Simulation , Protein Binding , Triazines/chemistry
9.
J Comput Aided Mol Des ; 34(12): 1275-1288, 2020 12.
Article in English | MEDLINE | ID: mdl-33067653

ABSTRACT

Fatty acid binding proteins (FABPs) are small intracellular proteins that reversibly bind fatty acids and other hydrophobic ligands. In cestodes, due to their inability to synthesise fatty acids and cholesterol de novo, FABPs, together with other lipid binding proteins, have been proposed as essential, involved in the trafficking and delivery of such lipophilic metabolites. Pharmacological agents that modify specific parasite FABP function may provide control of lipid signalling pathways, inflammatory responses and metabolic regulation that could be of crucial importance for the parasite development and survival. Echinococcus multilocularis and Echinococcus granulosus are, respectively, the causative agents of alveolar and cystic echinococcosis (or hydatidosis). These diseases are included in the World Health Organization's list of priority neglected tropical diseases. Here, we explore the potential of FABPs from cestodes as drug targets. To this end, we have applied a target repurposing approach to identify novel inhibitors of Echinococcus spp. FABPs. An ensemble of computational models was developed and applied in a virtual screening campaign of DrugBank library. 21 hits belonging to the applicability domain of the ensemble models were identified, and 3 of the hits were assayed against purified E. multilocularis FABP, experimentally confirming the model's predictions. Noteworthy, this is to our best knowledge the first report on isolation and purification of such four FABP, for which initial structural and functional characterization is reported here.


Subject(s)
Computer Simulation , Drug Repositioning/methods , Echinococcosis/drug therapy , Echinococcus multilocularis/drug effects , Fatty Acid-Binding Proteins/antagonists & inhibitors , Pharmaceutical Preparations/administration & dosage , Pharmaceutical Preparations/chemistry , Animals , Anthelmintics/pharmacology , Echinococcosis/parasitology , Fatty Acid-Binding Proteins/metabolism , Helminth Proteins/antagonists & inhibitors
10.
PLoS Negl Trop Dis ; 14(10): e0008762, 2020 10.
Article in English | MEDLINE | ID: mdl-33044977

ABSTRACT

Deoxyhypusine synthase (DHS) catalyzes the first step of the post-translational modification of eukaryotic translation factor 5A (eIF5A), which is the only known protein containing the amino acid hypusine. Both proteins are essential for eukaryotic cell viability, and DHS has been suggested as a good candidate target for small molecule-based therapies against eukaryotic pathogens. In this work, we focused on the DHS enzymes from Brugia malayi and Leishmania major, the causative agents of lymphatic filariasis and cutaneous leishmaniasis, respectively. To enable B. malayi (Bm)DHS for future target-based drug discovery programs, we determined its crystal structure bound to cofactor NAD+. We also reported an in vitro biochemical assay for this enzyme that is amenable to a high-throughput screening format. The L. major genome encodes two DHS paralogs, and attempts to produce them recombinantly in bacterial cells were not successful. Nevertheless, we showed that ectopic expression of both LmDHS paralogs can rescue yeast cells lacking the endogenous DHS-encoding gene (dys1). Thus, functionally complemented dys1Δ yeast mutants can be used to screen for new inhibitors of the L. major enzyme. We used the known human DHS inhibitor GC7 to validate both in vitro and yeast-based DHS assays. Our results show that BmDHS is a homotetrameric enzyme that shares many features with its human homologue, whereas LmDHS paralogs are likely to form a heterotetrameric complex and have a distinct regulatory mechanism. We expect our work to facilitate the identification and development of new DHS inhibitors that can be used to validate these enzymes as vulnerable targets for therapeutic interventions against B. malayi and L. major infections.


Subject(s)
Anthelmintics/pharmacology , Antiprotozoal Agents/pharmacology , Brugia malayi/drug effects , Enzyme Inhibitors/pharmacology , Helminth Proteins/antagonists & inhibitors , Leishmania major/drug effects , Oxidoreductases Acting on CH-NH Group Donors/antagonists & inhibitors , Protozoan Proteins/antagonists & inhibitors , Amino Acid Sequence , Animals , Anthelmintics/chemistry , Antiprotozoal Agents/chemistry , Brugia malayi/enzymology , Brugia malayi/genetics , Brugia malayi/growth & development , Drug Evaluation, Preclinical , Enzyme Inhibitors/chemistry , Helminth Proteins/chemistry , Helminth Proteins/genetics , Helminth Proteins/metabolism , High-Throughput Screening Assays , Leishmania major/enzymology , Leishmania major/genetics , Leishmania major/growth & development , Oxidoreductases Acting on CH-NH Group Donors/chemistry , Oxidoreductases Acting on CH-NH Group Donors/genetics , Oxidoreductases Acting on CH-NH Group Donors/metabolism , Protozoan Proteins/chemistry , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Sequence Alignment
11.
Science ; 369(6511): 1649-1653, 2020 09 25.
Article in English | MEDLINE | ID: mdl-32973031

ABSTRACT

Schistosome parasites kill 250,000 people every year. Treatment of schistosomiasis relies on the drug praziquantel. Unfortunately, a scarcity of molecular tools has hindered the discovery of new drug targets. Here, we describe a large-scale RNA interference (RNAi) screen in adult Schistosoma mansoni that examined the function of 2216 genes. We identified 261 genes with phenotypes affecting neuromuscular function, tissue integrity, stem cell maintenance, and parasite survival. Leveraging these data, we prioritized compounds with activity against the parasites and uncovered a pair of protein kinases (TAO and STK25) that cooperate to maintain muscle-specific messenger RNA transcription. Loss of either of these kinases results in paralysis and worm death in a mammalian host. These studies may help expedite therapeutic development and invigorate studies of these neglected parasites.


Subject(s)
Anthelmintics/pharmacology , Helminth Proteins/antagonists & inhibitors , Molecular Targeted Therapy , Protein Serine-Threonine Kinases/antagonists & inhibitors , Schistosoma mansoni/enzymology , Schistosomiasis mansoni/drug therapy , Animals , Anthelmintics/chemistry , Anthelmintics/therapeutic use , Genes, Helminth , Genetic Testing , Helminth Proteins/genetics , Protein Serine-Threonine Kinases/genetics , RNA Interference , Schistosoma mansoni/drug effects , Schistosoma mansoni/genetics , Schistosomiasis mansoni/parasitology , Transcription, Genetic/drug effects
12.
Int J Biol Macromol ; 165(Pt A): 249-267, 2020 Dec 15.
Article in English | MEDLINE | ID: mdl-32961182

ABSTRACT

The thiol-based glutathione reductase (GR) and thioredoxin reductase (TrxR) are the major antioxidant enzymes present in various organisms that maintain the internal redox homeostasis. The thioredoxin system has attracted the attention of researchers from diverse investigation fields of biological sciences. Apart from redox regulation, this system is thought to be the major regulator of various biological processes including transcription, apoptosis, etc. Identification and physicobiochemical characterization of the reductase enzyme i.e. Thioredoxin reductase (TrxR) revealed the potency of it to become a promising target. Novel therapeutic interventions by selective targeting of TrxR in parasitic organisms as well as in the cancer cells have now become a usual treatment approach. However, different isoforms and their variation in the penultimate amino acid (Selenocysteine or cysteine) present in the catalytic site of the enzyme have made this enzyme to respond differently towards various drugs and synthetic and/or natural compounds. Therefore, the present article seeks to highlight the importance and the detailed molecular mechanism, functional perspective underlying the TrxR inhibition in various parasitic protozoans, helminthes as well as in cancer cells for devising suitable anti-TrxR candidates.


Subject(s)
Antineoplastic Agents , Antioxidants , Antiparasitic Agents , Drug Delivery Systems , Enzyme Inhibitors , Helminth Proteins/antagonists & inhibitors , Neoplasm Proteins/antagonists & inhibitors , Protozoan Proteins/antagonists & inhibitors , Thioredoxin-Disulfide Reductase/antagonists & inhibitors , Animals , Antineoplastic Agents/chemistry , Antineoplastic Agents/therapeutic use , Antiparasitic Agents/chemistry , Antiparasitic Agents/therapeutic use , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/therapeutic use , Helminth Proteins/metabolism , Humans , Neoplasm Proteins/metabolism , Protozoan Proteins/metabolism , Thioredoxin-Disulfide Reductase/metabolism
13.
Mol Biochem Parasitol ; 240: 111319, 2020 11.
Article in English | MEDLINE | ID: mdl-32961204

ABSTRACT

Schistosoma japonicum glutathione transferase (Sj26GST), an enzyme central to detoxification of electrophilic compounds in the parasite, is upregulated in response to drug treatment. Therefore, Sj26GST may serve as a potential therapeutic target for the treatment of schistosomiasis. Herewith, we describe the structural basis of inhibition of Sj26GST by ellagic acid (EA). Using 1-chloro-2,4-dinitrobenzene and reduced glutathione (GSH) as Sj26GST substrates, EA was shown to inhibit Sj26GST activity by 66 % with an IC50 of 2.4 µM. Fluorescence spectroscopy showed that EA altered the polarity of the environment of intrinsic tryptophan and that EA decreased (in a dose-dependent manner) the interaction between Sj26GST and 8-Anilino-1-naphthalenesulfonate (ANS), which is a known GST H-site ligand. Thermodynamic studies indicated that the interaction between Sj26GST and EA is spontaneous (ΔG = -29.88 ± 0.07 kJ/mol), enthalpically-driven (ΔH = -9.48 ± 0.42 kJ/mol) with a favourable entropic change (ΔS = 20.40 ± 0.08 kJ/mol/K), and with a stoichiometry of four EA molecules bound per Sj26GST dimer. The 1.53 Å-resolution Sj26GST crystal structure (P 21 21 21 space group) complexed with GSH and EA shows that EA binds primarily at the dimer interface, stabilised largely by Van der Waal forces and H-bonding. Besides, EA bound near the H-site and less than 3.5 Å from the ε-NH2 of the γ-glutamyl moiety of GSH, in each subunit.


Subject(s)
Enzyme Inhibitors/chemistry , Glutathione Transferase/chemistry , Helminth Proteins/chemistry , Schistosoma japonicum/enzymology , Animals , Calorimetry , Chemical Phenomena , Dose-Response Relationship, Drug , Enzyme Activation/drug effects , Enzyme Inhibitors/pharmacology , Glutathione Transferase/antagonists & inhibitors , Helminth Proteins/antagonists & inhibitors , Kinetics , Ligands , Models, Molecular , Molecular Conformation , Molecular Structure , Protein Binding , Schistosoma japonicum/drug effects , Structure-Activity Relationship , Thermodynamics
14.
Biochem Biophys Res Commun ; 532(3): 355-361, 2020 11 12.
Article in English | MEDLINE | ID: mdl-32888646

ABSTRACT

Dugesia japonica, belonging to Platyhelminthes, plays an important role in the animal evolution and is well known for its extraordinary regenerative ability. Mitogen activated protein kinase (MAPK) pathway is an important cell signaling pathway that converts extracellular stimuli into a wide range of cellular responses. The MAP-extracellular signal-regulated kinase (MEK) is a main component of MAPK/ERK signaling, but there are few studies on mek gene in planarians. In this study, we observe the expression patterns of Djmek1 and Djmek2 in planarians, and find that both of the two genes are required for the planarian regeneration. At the same time, we also find that both Djmek1 and Djmek2 are involved in the planarian regeneration by regulation of cell proliferation and apoptosis. Together, our findings show that the functions of the two genes are similar and complementary, and they play an important role in the regeneration of planarians.


Subject(s)
Helminth Proteins/genetics , Helminth Proteins/physiology , Mitogen-Activated Protein Kinase Kinases/genetics , Mitogen-Activated Protein Kinase Kinases/physiology , Planarians/genetics , Planarians/physiology , Regeneration/genetics , Regeneration/physiology , Animals , Apoptosis/genetics , Apoptosis/physiology , Cell Proliferation/genetics , Cell Proliferation/physiology , Gene Expression Regulation , Helminth Proteins/antagonists & inhibitors , MAP Kinase Signaling System , Mitogen-Activated Protein Kinase Kinases/antagonists & inhibitors , RNA Interference , RNA, Messenger/genetics , RNA, Messenger/metabolism
15.
Sci Rep ; 10(1): 12710, 2020 07 29.
Article in English | MEDLINE | ID: mdl-32728104

ABSTRACT

Plant-parasitic nematodes pose a significant threat to agriculture causing annual yield losses worth more than 100 billion US$. Nematode control often involves the use of nematicides, but many of them including non-selective fumigants have been phased out, particularly due to ecotoxicological concerns. Thus new control strategies are urgently needed. Spirotetramat (SPT) is used as phloem-mobile systemic insecticide targeting acetyl-CoA carboxylase (ACC) of pest insects and mites upon foliar application. However, in nematodes the mode of action of SPT and its effect on their development have not been studied so far. Our studies revealed that SPT known to be activated in planta to SPT-enol acts as a developmental inhibitor of the free-living nematode Caenorhabditis elegans and the plant-parasitic nematode Heterodera schachtii. Exposure to SPT-enol leads to larval arrest and disruption of the life cycle. Furthermore, SPT-enol inhibits nematode ACC activity, affects storage lipids and fatty acid composition. Silencing of H. schachtii ACC by RNAi induced similar phenotypes and thus mimics the effects of SPT-enol, supporting the conclusion that SPT-enol acts on nematodes by inhibiting ACC. Our studies demonstrated that the inhibition of de novo lipid biosynthesis by interfering with nematode ACC is a new nematicidal mode of action addressed by SPT, a well-known systemic insecticide for sucking pest control.


Subject(s)
Acetyl-CoA Carboxylase/genetics , Antinematodal Agents/pharmacology , Aza Compounds/pharmacology , Chromadorea/growth & development , Spiro Compounds/pharmacology , Acetyl-CoA Carboxylase/antagonists & inhibitors , Animals , Caenorhabditis elegans/drug effects , Caenorhabditis elegans/growth & development , Caenorhabditis elegans/metabolism , Chromadorea/drug effects , Chromadorea/metabolism , Fatty Acids/metabolism , Helminth Proteins/antagonists & inhibitors , Helminth Proteins/genetics , Larva/drug effects , Larva/growth & development , Larva/metabolism , Life Cycle Stages/drug effects , Tylenchoidea/drug effects , Tylenchoidea/growth & development , Tylenchoidea/metabolism
16.
Methods Mol Biol ; 2137: 221-231, 2020.
Article in English | MEDLINE | ID: mdl-32399933

ABSTRACT

The in vitro screening of small molecules for enzymatic inhibition provides an efficient means of finding new compounds for developing drug candidates. This strategy has the advantage of being rapid and inexpensive to perform. Enzymes are suitable targets for screening when simple methods to obtain them and measure their activities are available and there is evidence of their essential role in the parasite's life cycle. Here, we describe the screening of small molecules as inhibitors of two Fasciola hepatica enzyme targets (cathepsin L and triose phosphate isomerase), an initial step to find new potential compounds for drug development strategies.


Subject(s)
Anthelmintics/pharmacology , Fasciola hepatica/drug effects , Helminth Proteins/antagonists & inhibitors , Small Molecule Libraries/pharmacology , Animals , Drug Delivery Systems/methods , Life Cycle Stages/drug effects
17.
Int J Mol Sci ; 21(3)2020 Jan 29.
Article in English | MEDLINE | ID: mdl-32013251

ABSTRACT

Protein ADP-ribosylation is a reversible post-translational modification (PTM) process that plays fundamental roles in cell signaling. The covalent attachment of ADP ribose polymers is executed by PAR polymerases (PARP) and it is essential for chromatin organization, DNA repair, cell cycle, transcription, and replication, among other critical cellular events. The process of PARylation or polyADP-ribosylation is dynamic and takes place across many tissues undergoing renewal and repair, but the molecular mechanisms regulating this PTM remain mostly unknown. Here, we introduce the use of the planarian Schmidtea mediterranea as a tractable model to study PARylation in the complexity of the adult body that is under constant renewal and is capable of regenerating damaged tissues. We identified the evolutionary conservation of PARP signaling that is expressed in planarian stem cells and differentiated tissues. We also demonstrate that Smed-PARP-3 homolog is required for proper regeneration of tissues in the anterior region of the animal. Furthermore, our results demonstrate, Smed-PARP-3(RNAi) disrupts the timely location of injury-induced cell death near the anterior facing wounds and also affects the regeneration of the central nervous system. Our work reveals novel roles for PARylation in large-scale regeneration and provides a simplified platform to investigate PARP signaling in the complexity of the adult body.


Subject(s)
Helminth Proteins/metabolism , Planarians/physiology , Poly(ADP-ribose) Polymerases/metabolism , Regeneration/physiology , Animals , Cell Death , DNA Repair/genetics , Genomic Instability , Helminth Proteins/antagonists & inhibitors , Helminth Proteins/classification , Helminth Proteins/genetics , Humans , Neurogenesis , Phylogeny , Planarians/genetics , Poly(ADP-ribose) Polymerases/chemistry , Poly(ADP-ribose) Polymerases/classification , Poly(ADP-ribose) Polymerases/genetics , Protein Processing, Post-Translational , RNA Interference , RNA, Double-Stranded/metabolism , Signal Transduction
18.
Sci Rep ; 9(1): 16165, 2019 11 07.
Article in English | MEDLINE | ID: mdl-31700060

ABSTRACT

Protein-based drug discovery strategies have the distinct advantage of providing insights into the molecular mechanisms of chemical effectors. Currently, there are no known trehalose-6-phosphate phosphatase (TPP) inhibitors that possess reasonable inhibition constants and chemical scaffolds amenable to convenient modification. In the present study, we subjected recombinant TPPs to a two-tiered screening approach to evaluate several diverse compound groups with respect to their potential as TPP inhibitors. From a total of 5452 compounds tested, N-(phenylthio)phthalimide was identified as an inhibitor of nematode TPPs with apparent Ki values of 1.0 µM and 0.56 µM against the enzymes from the zoonotic roundworms Ancylostoma ceylanicum and Toxocara canis, respectively. Using site-directed mutagenesis, we demonstrate that this compound acts as a suicide inhibitor that conjugates a strictly conserved cysteine residue in the vicinity of the active site of nematode TPPs. The anthelmintic properties of N-(phenylthio)phthalimide were assessed in whole nematode assays using larvae of the ascaroids T. canis and T. cati, as well as the barber's pole worm Haemonchus contortus. The compound was particularly effective against each of the ascaroids with an IC50 value of 9.3 µM in the survival assay of T. cati larvae, whereas no bioactivity was observed against H. contortus.


Subject(s)
Anthelmintics/pharmacology , Enzyme Inhibitors/pharmacology , Helminth Proteins/antagonists & inhibitors , Nematoda/enzymology , Phosphoric Monoester Hydrolases/antagonists & inhibitors , Phthalimides/pharmacology , Animals , Helminth Proteins/metabolism , Phosphoric Monoester Hydrolases/metabolism
19.
Molecules ; 24(20)2019 Oct 22.
Article in English | MEDLINE | ID: mdl-31652525

ABSTRACT

Root-knot nematodes (RKN), from the Meloidogyne genus, have a worldwide distribution and cause severe economic damage to many life-sustaining crops. Because of their lack of specificity and danger to the environment, most chemical nematicides have been banned from use. Thus, there is a great need for new and safe compounds to control RKN. Such research involves identifying beforehand the nematode proteins essential to the invasion. Since G protein-coupled receptors GPCRs are the target of a large number of drugs, we have focused our research on the identification of putative nematode GPCRs such as those capable of controlling the movement of the parasite towards (or within) its host. A datamining procedure applied to the genome of Meloidogyne incognita allowed us to identify a GPCR, belonging to the neuropeptide GPCR family that can serve as a target to carry out a virtual screening campaign. We reconstructed a 3D model of this receptor by homology modeling and validated it through extensive molecular dynamics simulations. This model was used for large scale molecular dockings which produced a filtered limited set of putative antagonists for this GPCR. Preliminary experiments using these selected molecules allowed the identification of an active compound, namely C260-2124, from the ChemDiv provider, which can serve as a starting point for further investigations.


Subject(s)
Antinematodal Agents/chemistry , Helminth Proteins/chemistry , Helminth Proteins/genetics , Receptors, G-Protein-Coupled/chemistry , Receptors, G-Protein-Coupled/genetics , Tylenchoidea/genetics , Animals , Antinematodal Agents/metabolism , Antinematodal Agents/pharmacology , Genome, Helminth , Helminth Proteins/antagonists & inhibitors , Host-Parasite Interactions/genetics , Solanum lycopersicum/parasitology , Molecular Dynamics Simulation , Phylogeny , Plant Diseases/parasitology , Plant Diseases/prevention & control , Plant Roots/parasitology , Protein Structure, Secondary , Receptors, G-Protein-Coupled/antagonists & inhibitors
20.
J Med Chem ; 62(19): 8733-8759, 2019 10 10.
Article in English | MEDLINE | ID: mdl-31496251

ABSTRACT

The only drug currently available for treatment of the neglected disease Schistosomiasis is Praziquantel, and the possible emergence of resistance makes research on novel therapeutic agents necessary and urgent. To this end, the targeting of Schistosoma mansoni epigenetic enzymes, which regulate the parasitic life cycle, emerged as a promising approach. Due to the strong effects of human sirtuin inhibitors on parasite survival and reproduction, Schistosoma sirtuins were postulated as potential therapeutic targets. In vitro testing of synthetic substrates of S. mansoni sirtuin 2 (SmSirt2) and kinetic experiments on a myristoylated peptide demonstrated lysine long-chain deacylation as an intrinsic SmSirt2 activity in addition to its known deacetylase activity for the first time. Focused in vitro screening of the GSK Kinetobox library and structure-activity relationships of identified hits led to the first SmSirt2 inhibitors with activity in the low micromolar range. Several SmSirt2 inhibitors showed potency against both larval schistosomes (viability) and adult worms (pairing, egg laying) in culture without general toxicity to human cancer cells.


Subject(s)
Helminth Proteins/antagonists & inhibitors , Schistosoma mansoni/metabolism , Sirtuin 2/antagonists & inhibitors , Animals , Helminth Proteins/metabolism , Humans , Kinetics , Larva/drug effects , Larva/metabolism , Lysine/chemistry , Niacinamide/chemistry , Niacinamide/metabolism , Niacinamide/pharmacology , Niacinamide/therapeutic use , Oxadiazoles/chemistry , Oxadiazoles/metabolism , Oxadiazoles/pharmacology , Oxadiazoles/therapeutic use , Peptides/chemistry , Peptides/metabolism , Peptides/pharmacology , Peptides/therapeutic use , Pyrimidines/chemistry , Pyrimidines/metabolism , Pyrimidines/pharmacology , Pyrimidines/therapeutic use , Schistosoma mansoni/growth & development , Schistosomiasis/drug therapy , Sirtuin 2/metabolism , Structure-Activity Relationship , Substrate Specificity
SELECTION OF CITATIONS
SEARCH DETAIL
...