Temporal genetic patterns of root growth in Brassica napus L. revealed by a low-cost, high-efficiency hydroponic system.

KEY MESSAGE: Application of a low-cost and high-efficiency hydroponic system in a rapeseed population verified two types of genetic factors ("persistent" and "stage-specific") that control root development. The root system is a vital plant component for nutrient and water acquisition and is targeted to enhance plant productivity. Genetic dissection of the root system generally focuses on a single stage, but roots grow continuously during plant development. To reveal the temporal genetic patterns of root development, we measured nine root-related traits in a rapeseed recombinant inbred line population at six continuous stages during vegetative growth, using a modified hydroponic system with low-cost and high-efficiency features that could synchronize plant growth under controlled conditions. Phenotypic correlation and growth dynamic analysis suggested the existence of two types of genetic factors ("persistent" and "stage-specific") that control root development. Dynamic (unconditional and conditional) quantitative trait loci (QTL) mapping detected 28 stage-specific and 23 persistent QTLs related to root growth. Among them, 13 early stage-specific, 19 persistent and 8 later stage-specific QTLs were detected at 7 DAS (days after sowing), 16 DAS and 5 EL (expanding leaf stage), respectively, providing efficient and adaptable stages for QTL identification. The effective prediction of biomass accumulation using root morphological traits (up to 96.6% or 92.64% at a specific stage or the final stage, respectively) verified that root growth allocation with maximum root uptake area facilitated biomass accumulation. Furthermore, marker-assistant selection, which combined the "persistent" and "stage-specific" QTLs, proved their effectiveness for root improvement with an excellent uptake area. Our results highlight the potential of high-throughput and precise phenotyping to assess the dynamic genetics of root growth and provide new insights into ideotype root system-based biomass breeding.

Hydroponics: are we moving towards that direction only because of the environment? A discussion on forecasting and a systems review.

During the evolution of the human, agriculture and land utilization was inevitably connected with survival in nature. Human activity was not only restricted to the production of agricultural products but also extended into many other sectors, such as the production of several industrial-made products, mining, and usage of fossil fuels as a standard method of generating electricity. However, the intense urbanization phenomenon ultimately caused, during the last few decades, the degradation of our natural environment. As a result, the quality (and quantity) of produced food we consume has significantly decreased. The need for the evolution of alternative methods of cultivation is constant and always a hot topic, especially in order to confront the multiple problems that conventional agriculture has. Hydroponics, an innovative cultivation method, comes to solve many of these problems.

A Flexible Low Cost Hydroponic System for Assessing Plant Responses to Small Molecules in Sterile Conditions.

A wide range of studies in plant biology are performed using hydroponic cultures. In this work, an in vitro hydroponic growth system designed for assessing plant responses to chemicals and other substances of interest is presented. This system is highly efficient in obtaining homogeneous and healthy seedlings of the C3 and C4 model species Arabidopsis thaliana and Setaria viridis, respectively. The sterile cultivation avoids algae and microorganism contamination, which are known limiting factors for plant normal growth and development in hydroponics. In addition, this system is scalable, enabling the harvest of plant material on a large scale with minor mechanical damage, as well as the harvest of individual parts of a plant if desired. A detailed protocol demonstrating that this system has an easy and low-cost assembly, as it uses pipette racks as the main platform for growing plants, is provided. The feasibility of this system was validated using Arabidopsis seedlings to assess the effect of the drug AZD-8055, a chemical inhibitor of the target of rapamycin (TOR) kinase. TOR inhibition was efficiently detected as early as 30 min after an AZD-8055 treatment in roots and shoots. Furthermore, AZD-8055-treated plants displayed the expected starch-excess phenotype. We proposed this hydroponic system as an ideal method for plant researchers aiming to monitor the action of plant inducers or inhibitors, as well as to assess metabolic fluxes using isotope-labeling compounds which, in general, requires the use of expensive reagents.

Effectiveness of the California state ban on the sale of Caulerpa species in aquarium retail stores in southern California.

The invasion of the aquarium strain of the green alga Caulerpa taxifolia and subsequent alteration of community structure in the Mediterranean Sea raised awareness of the potential for non-native seaweeds to impact coastal communities. An introduction of C. taxifolia in southern California in 2000, presumably from the release of aquarium specimens, cost ~$7 million for eradication efforts. Besides C. taxifolia, other Caulerpa species being sold for aquarium use also may have the potential to invade southern Californian and U.S. waters. Surveys of the availability of Caulerpa species in southern California aquarium retail stores in 2000-2001 revealed that 26 of 50 stores sold at least one Caulerpa species (52 %) with seven stores selling C. taxifolia. In late 2001, California imposed a ban on the importation, sale, or possession of nine Caulerpa species; the City of San Diego expanded these regulations to include the entire genus. To determine the effectiveness of the California ban, we resurveyed Caulerpa availability at 43 of the 50 previously sampled retail stores in southern California in ~2006, ~4 years following the ban. Of the 43 stores, 23 sold Caulerpa (53 %) with four stores selling C. taxifolia. A χ(2) test of frequency of availability before and after the California ban suggests that the ban has not been effective and that the aquarium trade continues to represent a potential vector for distributing Caulerpa specimens, including C. taxifolia. This study underscores the need for increased enforcement and outreach programs to increase awareness among the aquarium industry and aquarium hobbyists.

Hydroponics reducing effluent's heavy metals discharge.

This paper investigates the capacity of Nutrient Film Technique (NFT) to control effluent's heavy metals discharge. A commercial hydroponic system was adapted to irrigate lettuces with primary treated wastewater for studying the potential heavy metals removal. A second commercial hydroponic system was used to irrigate the same type of lettuces with nutrient solution and this system was used as a control. Results showed that lettuces grew well when irrigated with primary treated effluent in the commercial hydroponic system. The NFT-plant system heavy metals removal efficiency varied amongst the different elements, The system's removal efficiency for Cr was more than 92%, Ni more than 85%, in addition to more than 60% reduction of B, Pb, and Zn. Nonetheless, the NFT-plants system removal efficiencies for As, Cd and Cu were lower than 30%. Results show that lettuces accumulated heavy metals in leaves at concentrations higher than the maximum acceptable European and Australian levels. Therefore, non-edible plants such as flowers or pyrethrum are recommended as value added crops for the proposed NFT.

Greenhouse tomato limited cluster production systems: crop management practices affect yield.

Limited-cluster production systems may be a useful strategy to increase crop production and profitability for the greenhouse tomato (Lycopersicon esculentum Mill). In this study, using an ebb-and-flood hydroponics system, we modified plant architecture and spacing and determined the effects on fruit yield and harvest index at two light levels. Single-cluster plants pruned to allow two leaves above the cluster had 25% higher fruit yields than did plants pruned directly above the cluster; this was due to an increase in fruit weight, not fruit number. Both fruit yield and harvest index were greater for all single-cluster plants at the higher light level because of increases in both fruit weight and fruit number. Fruit yield for two-cluster plants was 30% to 40% higher than for single-cluster plants, and there was little difference in the dates or length of the harvest period. Fruit yield for three-cluster plants was not significantly different from that of two-cluster plants; moreover, the harvest period was delayed by 5 days. Plant density (5.5, 7.4, 9.2 plants/m2) affected fruit yield/plant, but not fruit yield/unit area. Given the higher costs for materials and labor associated with higher plant densities, a two-cluster crop at 5.5 plants/m2 with two leaves above the cluster was the best of the production system strategies tested.

Using mini-rockwool blocks as growing media for limited-cluster tomato production.

Rockwool is an excellent growing medium for the hydroponic production of tomato; however, the standard size rockwool blocks [4 x 4 x 2.5 inches (10 x 10 x 6.3 cm) or 3 x 3 x 2.5 inches (7.5 x 7.5 x 6.3 cm)] are expensive. The following experiments were conducted with less expensive minirock wool blocks (MRBs), on rayon polyester material (RPM) as a bench top liner, to reduce the production cost of tomatoes (Lycopersicon esculentum) grown in a limited-cluster, ebb and flood hydroponic cultivation system. Fruit yield for single-cluster plants growing in MRBs [2 x 2 x 1.6 inches (5 x 5 x 4 cm) and 1.6 x 1.6 x 1.6 inches (4 x 4 x 4 cm)] was not significantly different from plants grown in larger sized blocks (3 x 3 x 2.5 inches). When the bench top was lined with RPM, roots penetrated the RPM, and an extensive root mat developed between the RPM and the bench top. The fruit yield from plants on RPM was significantly increased compared to plants without RPM due to increases in fruit size and fruit number. RPM also significantly reduced the incidence of blossom-end rot. In a second experiment, single- and double-cluster plants were grown on RPM. Fruit yield for double-cluster plants was 40% greater than for single-cluster plants due to an increase in fruit number, although the fruit were smaller in size. As in the first experiment, fruit yield for all plants grown in MRBs was not significantly different from plants grown in the larger sized blocks. MRBs and a RPM bench liner are an effective combination in the production of limited-cluster hydroponic tomatoes.