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Methods ; 57(2): 179-86, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22503776

ABSTRACT

The recent advent in single-molecule imaging and manipulation methods has made a significant impact on the understanding of molecular mechanisms underlying many essential cellular processes. Single-molecule techniques such as electron microscopy and DNA fiber assays have been employed to study the duplication of genome in eukaryotes. Here, we describe a single-molecule assay that allows replication of DNA attached to the functionalized surface of a microfluidic flow cell in a soluble Xenopus leavis egg extract replication system and subsequent visualization of replication products via fluorescence microscopy. We also explain a method for detection of replication proteins, through fluorescently labeled antibodies, on partially replicated DNA immobilized at both ends to the surface.


Subject(s)
Cell Extracts/genetics , DNA Replication , DNA, Viral/biosynthesis , Immobilized Nucleic Acids/biosynthesis , Oocytes/cytology , Animals , Base Sequence , Cell Separation , DNA, Viral/chemistry , Female , Flow Cytometry , Fluorescent Antibody Technique, Indirect , Immobilized Nucleic Acids/chemistry , Microfluidic Analytical Techniques/instrumentation , Proliferating Cell Nuclear Antigen/chemistry , Protein Binding , Staining and Labeling , Xenopus laevis
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