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1.
Biochemistry ; 45(24): 7644-53, 2006 Jun 20.
Article in English | MEDLINE | ID: mdl-16768460

ABSTRACT

Polycyclic aromatic hydrocarbon (PAH)-DNA adducts pervert the execution or fidelity of enzymatic DNA transactions and cause mutations and cancer. Here, we examine the effects of intercalating PAH-DNA adducts on the religation reaction of vaccinia DNA topoisomerase, a prototypal type IB topoisomerase (TopIB), and the 3' end-resection reaction of Escherichia coli exonuclease III (ExoIII), a DNA repair enzyme. Vaccinia TopIB forms a covalent DNA-(3'-phosphotyrosyl)-enzyme intermediate at a target site 5'-C(+5)C(+4)C(+3)T(+2)T(+1)p / N(-1) in duplex DNA. The rate of the forward cleavage reaction is suppressed to varying degrees by benzo[a]pyrene (BP) or benzo[c]phenanthrene (BPh) adducts at purine bases within the 3'-G(+5)G(+4)G(+3)A(+2)A(+1)T(-1)A(-2) sequence of the nonscissile strand. We report that BP adducts at the +1 and -2 N6-deoxyadenosine (dA) positions flanking the scissile phosphodiester slow the rate of DNA religation to a greater degree than they do the cleavage rate. By increasing the cleavage equilibrium constant > or = 10-fold, the BPdA adducts, which are intercalated via the major groove, act as TopIB poisons. With respect to ExoIII, we find that (i) single BPdA adducts act as durable roadblocks to ExoIII digestion, which is halted at sites 1 and 2 nucleotides prior to the modified base; (ii) single BPhdA adducts, which also intercalate via the major groove, elicit a transient pause prior to the lesion, which is eventually resected; and (iii) BPh adducts at N2-deoxyguanosine, which intercalate via the minor groove, are durable impediments to ExoIII digestion. These results highlight the sensitivity of repair outcomes to the structure of the PAH ring system and whether intercalation occurs via the major or minor groove.


Subject(s)
DNA Adducts/poisoning , DNA Topoisomerases/metabolism , DNA/metabolism , Exodeoxyribonucleases/metabolism , Polycyclic Aromatic Hydrocarbons/poisoning , Vaccinia virus/enzymology , Base Sequence , Binding Sites , DNA/chemistry , DNA Adducts/chemistry , Escherichia coli/enzymology , Intercalating Agents/chemistry , Intercalating Agents/poisoning , Kinetics , Nucleic Acid Conformation , Polycyclic Aromatic Hydrocarbons/chemistry , Substrate Specificity
2.
Indian Pediatr ; 31(6): 671-4, 1994 Jun.
Article in English | MEDLINE | ID: mdl-7896391

ABSTRACT

Thirty patients of epidemic dropsy from seven families scattered in different areas of East Delhi and UP were studied. The age group of the affected individuals varied from 2 years to 55 years. Argemone oil contamination was found in mustard oil used for cooking. Sanguinarine was detected in all suspected oil samples. Pitting edema of legs was the most consistent feature present in all cases. Other prominent features like local erythema and tenderness were present in 80% and 70% cases, respectively. In contrast to earlier epidemics, two striking features were presence of persistent tachycardia without any pyrexia in all the cases and absence of any ocular problems. There was one death due to congestive heart failure and partial recovery in all others in a 2 months follow up.


Subject(s)
Alkaloids/poisoning , Edema/epidemiology , Food Contamination , Intercalating Agents/poisoning , Leg , Mustard Plant/poisoning , Plant Extracts/poisoning , Plant Oils/poisoning , Plants, Medicinal , Adolescent , Adult , Benzophenanthridines , Child , Child, Preschool , Edema/chemically induced , Humans , India/epidemiology , Isoquinolines , Middle Aged
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