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1.
J Enzyme Inhib Med Chem ; 35(1): 639-649, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32048531

ABSTRACT

Leishmaniasis is a neglected disease caused by the protozoa Leishmania ssp. Environmental differences found by the parasites in the vector and the host are translated into cellular stress, leading to the production of heat shock proteins (Hsp). These are molecular chaperones involved in the folding of nascent proteins as well as in the regulation of gene expression, signalling events and proteostasis. Since Leishmania spp. use Hsp90 to trigger important transitions between their different stages of the life cycle, this protein family becomes a profitable target in anti-parasite drug discovery. In this work, we implemented a multidisciplinary strategy coupling molecular modelling with in vitro assays to identify small molecules able to inhibit Hsp90 from L. braziliensis (LbHsp90). Overall, we identified some compounds able to kill the promastigote form of the L. braziliensis, and to inhibit LbHsp90 ATPase activity.


Subject(s)
Antiprotozoal Agents/pharmacology , Enzyme Inhibitors/pharmacology , HSP90 Heat-Shock Proteins/antagonists & inhibitors , Leishmania braziliensis/drug effects , Molecular Chaperones/pharmacology , Small Molecule Libraries/pharmacology , Adenosine Triphosphatases/antagonists & inhibitors , Adenosine Triphosphatases/metabolism , Antiprotozoal Agents/chemical synthesis , Antiprotozoal Agents/chemistry , Dose-Response Relationship, Drug , Drug Discovery , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , HSP90 Heat-Shock Proteins/metabolism , Leishmania braziliensis/chemistry , Models, Molecular , Molecular Chaperones/chemical synthesis , Molecular Chaperones/chemistry , Molecular Structure , Parasitic Sensitivity Tests , Small Molecule Libraries/chemical synthesis , Small Molecule Libraries/chemistry , Structure-Activity Relationship
2.
Mem Inst Oswaldo Cruz ; 114: e190147, 2019.
Article in English | MEDLINE | ID: mdl-31553371

ABSTRACT

BACKGROUND: Calpains are proteins belonging to the multi-gene family of calcium-dependent cysteine peptidases that undergo tight on/off regulation, and uncontrolled proteolysis of calpains is associated with severe human pathologies. Calpain orthologues are expanded and diversified in the trypanosomatids genome. OBJECTIVES: Here, we characterised calpains in Leishmania braziliensis, the main causative agent of cutaneous leishmaniasis in Brazil. METHODS/FINDINGS: In total, 34 predicted calpain-like genes were identified. After domain structure evaluation, reverse transcription-quantitative polymerase chain reaction (RT-qPCR) during in vitro metacyclogenesis revealed (i) five genes with enhanced expression in the procyclic stage, (ii) one augmented gene in the metacyclic stage, and (iii) one procyclic-exclusive transcript. Western blot analysis revealed that an antibody against a consensus-conserved peptide reacted with multiple calpain-like proteins, which is consistent with the multi-gene family characteristic. Flow cytometry and immunocytochemistry analyses revealed the presence of calpain-like molecules mainly in the cytoplasm, to a lesser extent in the plasma membrane, and negligible levels in the nucleus, which are all consistent with calpain localisation. Eventually, the calpain inhibitor MDL28170 was used for functional studies revealing (i) a leishmaniostatic effect, (ii) a reduction in the association index in mouse macrophages, (iii) ultra-structural alterations conceivable with autophagy, and (iv) an enhanced expression of the virulence factor GP63. CONCLUSION: This report adds novel insights into the domain structure, expression, and localisation of L. braziliensis calpain-like molecules.


Subject(s)
Calpain/genetics , Genome, Protozoan/genetics , Leishmania braziliensis/chemistry , Macrophages, Peritoneal/metabolism , Animals , Blotting, Western , Calpain/drug effects , Calpain/metabolism , Calpain/ultrastructure , Cysteine Proteinase Inhibitors/pharmacology , Dipeptides/pharmacology , Flow Cytometry , Gene Expression Regulation , Immunohistochemistry , Leishmania braziliensis/genetics , Leishmania braziliensis/metabolism , Leishmania braziliensis/ultrastructure , Mice , Mice, Inbred BALB C , Microscopy, Electron, Transmission , Reverse Transcriptase Polymerase Chain Reaction , Virulence Factors
3.
Mem Inst Oswaldo Cruz ; 114: e180506, 2019 Mar 21.
Article in English | MEDLINE | ID: mdl-30916117

ABSTRACT

BACKGROUND: Nicotinamide adenine dinucleotide (NAD) plays a central role in energy metabolism and integrates cellular metabolism with signalling and gene expression. NAD biosynthesis depends on the enzyme nicotinamide/nicotinate mononucleotide adenylyltransferase (NMNAT; EC: 2.7.7.1/18), in which converge the de novo and salvage pathways. OBJECTIVE: The purpose of this study was to analyse the protein-protein interactions (PPI) of NMNAT of Leishmania braziliensis (LbNMNAT) in promastigotes. METHODS: Transgenic lines of L. braziliensis promastigotes were established by transfection with the pSP72αneoαLbNMNAT-GFP vector. Soluble protein extracts were prepared, co-immunoprecipitation assays were performed, and the co-immunoprecipitates were analysed by mass spectrometry. Furthermore, bioinformatics tools such as network analysis were applied to generate a PPI network. FINDINGS: Proteins involved in protein folding, redox homeostasis, and translation were found to interact with the LbNMNAT protein. The PPI network indicated enzymes of the nicotinate and nicotinamide metabolic routes, as well as RNA-binding proteins, the latter being the point of convergence between our experimental and computational results. MAIN CONCLUSION: We constructed a model of PPI of LbNMNAT and showed its association with proteins involved in various functions such as protein folding, redox homeostasis, translation, and NAD synthesis.


Subject(s)
Leishmania braziliensis/metabolism , NAD/metabolism , Nicotinamide-Nucleotide Adenylyltransferase/metabolism , Protein Interaction Mapping/methods , Leishmania braziliensis/chemistry , Leishmania braziliensis/enzymology , Models, Molecular , Signal Transduction
4.
Mol Biochem Parasitol ; 227: 47-52, 2019 01.
Article in English | MEDLINE | ID: mdl-30571993

ABSTRACT

Glucokinase from pathogenic protozoa of the genus Leishmania is a potential drug target for the chemotherapeutic treatment against leishmaniasis because this enzyme is located at a nodal point between two critically important metabolic pathways, glycolysis and the pentose phosphate pathway (PPP). L. braziliensis glucokinase (LbGlcK) was evaluated for its structural characterization and enzymatic performance. The enzyme catalyzes the phosphorylation of d-glucose with co-substrate ATP to yield the products G6P and ADP. LbGlcK had KM values determined as 6.61 ± 2.63 mM and 0.338 ± 0.080 mM for d-glucose and ATP, respectively. The 1.85 Å resolution X-ray crystal structure of the apo form of LbGlcK was determined and a homodimer was revealed where each subunit (both in open conformations) included the typical small and large domains. Structural comparisons were assessed in relationship to Homo sapiens hexokinase IV and Trypanosoma cruzi glucokinase. Comparisons revealed that all residues important for making hydrogen bonding interactions with d-glucose in the active site and catalysis were strictly conserved. LbGlcK was screened against four glucosamine analogue inhibitors and the stronger inhibitor of the series, HPOP-GlcN, had a Ki value of 56.9 ± 16.6 µM that exhibited competitive inhibition. For the purpose of future structure-based drug design experimentation, L. braziliensis glucokinase was observed to be very similar to T. cruzi glucokinase even though there was a 44% protein sequence identity between the two enzymes.


Subject(s)
Glucokinase/chemistry , Glucokinase/metabolism , Leishmania braziliensis/enzymology , Leishmaniasis, Cutaneous/parasitology , Protozoan Proteins/chemistry , Protozoan Proteins/metabolism , Adenosine Diphosphate/metabolism , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Crystallography, X-Ray , Glucokinase/genetics , Glucose/metabolism , Humans , Kinetics , Leishmania braziliensis/chemistry , Leishmania braziliensis/genetics , Models, Molecular , Phosphorylation , Protozoan Proteins/genetics , Sequence Alignment , Substrate Specificity
5.
Mem. Inst. Oswaldo Cruz ; 114: e190147, 2019. tab, graf
Article in English | LILACS | ID: biblio-1040618

ABSTRACT

BACKGROUND Calpains are proteins belonging to the multi-gene family of calcium-dependent cysteine peptidases that undergo tight on/off regulation, and uncontrolled proteolysis of calpains is associated with severe human pathologies. Calpain orthologues are expanded and diversified in the trypanosomatids genome. OBJECTIVES Here, we characterised calpains in Leishmania braziliensis, the main causative agent of cutaneous leishmaniasis in Brazil. METHODS/FINDINGS In total, 34 predicted calpain-like genes were identified. After domain structure evaluation, reverse transcription-quantitative polymerase chain reaction (RT-qPCR) during in vitro metacyclogenesis revealed (i) five genes with enhanced expression in the procyclic stage, (ii) one augmented gene in the metacyclic stage, and (iii) one procyclic-exclusive transcript. Western blot analysis revealed that an antibody against a consensus-conserved peptide reacted with multiple calpain-like proteins, which is consistent with the multi-gene family characteristic. Flow cytometry and immunocytochemistry analyses revealed the presence of calpain-like molecules mainly in the cytoplasm, to a lesser extent in the plasma membrane, and negligible levels in the nucleus, which are all consistent with calpain localisation. Eventually, the calpain inhibitor MDL28170 was used for functional studies revealing (i) a leishmaniostatic effect, (ii) a reduction in the association index in mouse macrophages, (iii) ultra-structural alterations conceivable with autophagy, and (iv) an enhanced expression of the virulence factor GP63. CONCLUSION This report adds novel insights into the domain structure, expression, and localisation of L. braziliensis calpain-like molecules.


Subject(s)
Animals , Mice , Leishmania braziliensis/chemistry , Calpain/genetics , Macrophages, Peritoneal/metabolism , Genome, Protozoan/genetics , Leishmania braziliensis/genetics , Leishmania braziliensis/metabolism , Leishmania braziliensis/ultrastructure , Immunohistochemistry , Calpain/drug effects , Calpain/metabolism , Calpain/ultrastructure , Cysteine Proteinase Inhibitors/pharmacology , Gene Expression Regulation , Blotting, Western , Reverse Transcriptase Polymerase Chain Reaction , Virulence Factors , Microscopy, Electron, Transmission , Dipeptides/pharmacology , Flow Cytometry , Mice, Inbred BALB C
6.
Biochim Biophys Acta Proteins Proteom ; 1866(11): 1190-1198, 2018 11.
Article in English | MEDLINE | ID: mdl-30248409

ABSTRACT

In Brazil, the mucocutaneous form of leishmaniasis, caused by the parasite Leishmania braziliensis, is a widespread and very challenging disease responsible for disfiguration and, in the most severe cases, death. Heat shock protein 90 (Hsp90) is a ubiquitous molecular chaperone playing a pivotal role in the folding process of client proteins, and therefore its activity is fundamental for cell survival and proliferation. Since the chaperone activity requires ATP hydrolysis, molecules able to occupy the ATP binding pocket in the protein N-terminal domain (NTD) act as Hsp90 inhibitors. The development of selective molecules targeting the ATPase site of protozoan Hsp90 is tricky for the high homology with the human Hsp90 NTD (hNTD). Notably, only the human Lys112 is replaced by Arg97 in the L. braziliensis enzyme. Recently, this difference has been probed to design selective inhibitors targeting parasite Hsp90s. Here, a reliable protocol for expression and purification of LbHsp90-NTD (LbNTD) was developed but its structural characterization was unsuccessful. The role of Arg97 in LbNTD was hence probed by means of the "leishmanized" K112R variant of hNTDα. To deeply investigate the role of this residue, also the hNTDα K112A variant was generated. Structural studies performed on hNTDα and its variants using various ADP and ATP analogues and cAMP revealed that this residue is not crucial for nucleotide binding. This finding strongly suggests that Arg97 in LbNTD and more generally the conserved arginine residue in parasite Hsp90s are not exploitable for the development of selective inhibitors.


Subject(s)
HSP90 Heat-Shock Proteins/chemistry , Leishmania braziliensis/chemistry , Mutagenesis, Site-Directed , Protozoan Proteins/chemistry , Adenosine Triphosphate/chemistry , Binding Sites , Brazil , Cloning, Molecular , HSP90 Heat-Shock Proteins/genetics , Humans , Hydrolysis , Leishmania braziliensis/genetics , Molecular Chaperones/chemistry , Molecular Chaperones/genetics , Protein Binding , Protein Conformation , Protozoan Proteins/genetics
7.
Parasitol Int ; 67(3): 344-350, 2018 Jun.
Article in English | MEDLINE | ID: mdl-29408435

ABSTRACT

New candidates for serological markers against leishmaniasis are required to be identified, since the presence of high titers of anti-Leishmania antibodies remain detected in sera of treated and cured patients, when current antigens have being employed. In this study, the diagnostic performance of a conserved Leishmania hypothetical protein was evaluated against a human and canine serological panel. The serological follow-up of the patients was also evaluated, using this recombinant antigen (rLiHyS) in ELISA assays. In the results, high sensitivity and specificity values were found when rLiHyS was used in the serological tests, while when the recombinant A2 (rA2) protein or an antigenic Leishmania preparation were used as controls, low sensitivity and specificity were found. Regarding the serological follow-up of the patients, significant reductions in the anti-rLiHyS antibody levels were found and, one year after the treatments, the anti-protein IgG production was similar to this found in the non-infected groups, reflecting a drop of the anti-rLiHyS antibody production. In conclusion, the present study shows for the first time a new recombinant antigen used to identify tegumentary and visceral leishmaniasis, as well as being able to serologically distinguish treated and cured patients from those developing active disease.


Subject(s)
Leishmania braziliensis/immunology , Leishmania infantum/immunology , Leishmaniasis, Cutaneous/diagnosis , Leishmaniasis, Visceral/diagnosis , Protozoan Proteins/immunology , Adult , Amino Acid Sequence , Animals , Antigens, Helminth/genetics , Antigens, Helminth/immunology , Biomarkers/blood , Chagas Disease/diagnosis , Chagas Disease/immunology , Dog Diseases/blood , Dog Diseases/immunology , Dog Diseases/parasitology , Dogs , Enzyme-Linked Immunosorbent Assay , Female , Humans , Leishmania braziliensis/chemistry , Leishmania infantum/chemistry , Leishmaniasis, Cutaneous/immunology , Leishmaniasis, Visceral/diet therapy , Leishmaniasis, Visceral/immunology , Male , Middle Aged , Prognosis , Protozoan Proteins/genetics , Recombinant Proteins/immunology , Sensitivity and Specificity , Serologic Tests/methods , Young Adult
8.
J Microbiol Methods ; 148: 46-48, 2018 05.
Article in English | MEDLINE | ID: mdl-29289564

ABSTRACT

This work developed a simple empirical algorithm to distinguish three Leishmania species using MALDI-TOF mass spectrometry. It suggests that complicated computer algorithms may not always be necessary for clinically useful microbiology applications.


Subject(s)
Leishmania braziliensis/chemistry , Leishmania braziliensis/classification , Leishmaniasis, Cutaneous/parasitology , Microbiological Techniques/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Algorithms , Humans
9.
Protein Pept Lett ; 24(10): 982-988, 2017.
Article in English | MEDLINE | ID: mdl-28758598

ABSTRACT

BACKGROUND: The serological diagnostic methods currently available for mucocutaneous leishmaniasis (MCL) lack specificity when complete parasites are used; however, such specificity increases when protein fractions are used. Ribosomal proteins have been reported to induce antibodies in animal and humans infected with the parasite, making them a worth candidate to assess its diagnosis potential. OBJECTIVE: This study was thus aimed at evaluating synthetic peptides derived from Leishmania braziliensis ribosomal proteins S25 and S5 as antigen candidates for diagnosing MCL by ELISA Methods: It was used 8 and 13 peptides derived from ribosomal proteins 25 and S5 respectively as antigens in order to detect IgG antibodies by ELISA in people with active MCL, Chagas disease (CH) and autoimmune disease (AID). RESULTS: 4 of these 21 peptides (P4, P6, P19 and P21) had the greatest sensitivity (21.7%, 13.04%, 20% and 20%, respectively) as well as having 95%, 100%, 100% and 82.5% specificity, respectively. CONCLUSION: The study revealed the limited usefulness of the peptides being studied as a diagnostic tool in the conditions used here, because its low sensitivity, but it is worth highlighting that the use of peptides as antigen in the serodiagnosis of MCL may overcome the cross reaction presented with other antigens, thus avoiding false positives.


Subject(s)
Leishmania braziliensis/chemistry , Leishmaniasis, Mucocutaneous/diagnosis , Peptides/chemistry , Protozoan Proteins/chemistry , Ribosomal Proteins/chemistry , Amino Acid Sequence , Autoimmune Diseases/diagnosis , Chagas Disease/diagnosis , Cross Reactions , Enzyme-Linked Immunosorbent Assay , Humans , Peptides/immunology , Sensitivity and Specificity , Serologic Tests
10.
Proteins ; 84(4): 473-87, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26798994

ABSTRACT

New strategies to control Leishmania disease demand an extensive knowledge about several aspects of infection including the understanding of its molecular events. In murine models, cysteine proteinase B from Leishmania amazonensis promotes regulation of immune response, and fragments from its C-terminus extension (cyspep) can play a decisive role in the host-parasite interaction. The interaction between cyspep-derived peptides and major histocompatibility complex (MHC) proteins is a crucial factor in Leishmania infections. Seven cyspep-derived peptides, previously identified as capable of interacting with H-2 (murine) MHC class I proteins, were studied in this work. We established a protocol to simulate the unbinding of these peptides from the cleft of H-2 receptors. From the simulations, we estimated the corresponding free energy of dissociation (ΔGd ) and described the molecular events that occur during the exit of peptides from the cleft. To test the reliability of this method, we first applied it to a calibration set of four crystallographic MHC/peptide complexes. Next, we explored the unbinding of the seven complexes mentioned above. Results were consistent with ΔGd values obtained from surface plasmon resonance (SPR) experiments. We also identified some of the primary interactions between peptides and H-2 receptors, and we detected three regions of influence for the interaction. This pattern was systematically observed for the peptides and helped determine a minimum distance for the real interaction between peptides and H-2 proteins occurring at ∼ 25 Å.


Subject(s)
Cysteine Proteases/chemistry , Epitopes/chemistry , Histocompatibility Antigens Class I/chemistry , Leishmania braziliensis/chemistry , Peptides/chemistry , Protozoan Proteins/chemistry , Amino Acid Sequence , Animals , Crystallography, X-Ray , Cysteine Proteases/genetics , Cysteine Proteases/immunology , Epitopes/genetics , Epitopes/immunology , Gene Expression , Histocompatibility Antigens Class I/genetics , Histocompatibility Antigens Class I/immunology , Leishmania braziliensis/pathogenicity , Leishmaniasis, Cutaneous/immunology , Leishmaniasis, Cutaneous/parasitology , Mice , Molecular Dynamics Simulation , Peptides/genetics , Peptides/immunology , Protein Binding , Protein Folding , Protein Interaction Domains and Motifs , Protein Structure, Secondary , Protozoan Proteins/genetics , Protozoan Proteins/immunology , Surface Plasmon Resonance , Thermodynamics
11.
Immunobiology ; 221(2): 253-9, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26572279

ABSTRACT

Besides the Th1×Th2 paradigm, Treg and Th17 cytokines may play a role in the response to American tegumentary leishmaniasis. Considering the sensitivity and accuracy of qPCR and the lack of studies using this approach, we evaluated mRNA expression for IFN-γ, TNF-α, IL-4, IL-10, IL-6, IL-17A, IL-22, TGF-ß, Foxp3 and RORC in peripheral blood mononuclear cells (PBMC) from patients with active disease, after stimulation with L. (V.) braziliensis soluble or insoluble fractions. Our results show that the antigens promoted specific mRNA expression related to the immune response in patients with ATL, and the insoluble fraction seems to stimulate the immune response in a higher intensity. The pro-inflammatory response was also fueled by IFN-γ and TNF-α, probably due to the active disease. IL-4, in certain way, seems to regulate this response along with IL-10 that may be produced by Treg cells, which are supposedly present in the patients' samples due the evidenced expression of Foxp3, in the presence of AgIns. In contrast, down-regulated RORC suggests that the significant levels of IL-6 expressed in response to AgSol were not able to induce an expressive Th17 profile along with TGF-ß, which might have predominantly contributed to the development of a regulatory profile in the active disease.


Subject(s)
Leishmania braziliensis/immunology , Leishmaniasis, Cutaneous/immunology , RNA, Messenger/immunology , T-Lymphocytes, Regulatory/immunology , Th1 Cells/immunology , Adolescent , Adult , Aged , Antigens, Protozoan/pharmacology , Case-Control Studies , Complex Mixtures/pharmacology , Female , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/immunology , Gene Expression Regulation/drug effects , Humans , Interferon-gamma/genetics , Interferon-gamma/immunology , Interleukins/genetics , Interleukins/immunology , Leishmania braziliensis/chemistry , Leishmaniasis, Cutaneous/genetics , Leishmaniasis, Cutaneous/parasitology , Leishmaniasis, Cutaneous/pathology , Male , Middle Aged , Nuclear Receptor Subfamily 1, Group F, Member 3/genetics , Nuclear Receptor Subfamily 1, Group F, Member 3/immunology , Primary Cell Culture , RNA, Messenger/genetics , T-Lymphocytes, Regulatory/drug effects , T-Lymphocytes, Regulatory/parasitology , Th1 Cells/drug effects , Th1 Cells/parasitology , Transforming Growth Factor beta/genetics , Transforming Growth Factor beta/immunology , Tumor Necrosis Factor-alpha/genetics , Tumor Necrosis Factor-alpha/immunology
12.
Clin Vaccine Immunol ; 22(11): 1187-96, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26376929

ABSTRACT

The serodiagnosis of human tegumentary leishmaniasis (TL) presents some problems, such as the low level of antileishmanial antibodies found in most of the patients, as well as the cross-reactivity in subjects infected by other trypanosomatids. In the present study, an immunoproteomic approach was performed aimed at identification of antigens in total extracts of stationary-phase promastigote and amastigote-like forms of Leishmania (Viannia) braziliensis using sera from TL patients. With the purpose of reducing the cross-reactivity of the identified proteins, spots recognized by sera from TL patients, as well as those recognized by antibodies present in sera from noninfected patients living in areas where TL is endemic and sera from Chagas disease patients, were discarded. Two Leishmania hypothetical proteins and 18 proteins with known functions were identified as antigenic. The study was extended with some of them to validate the results of the immunoscreening. The coding regions of five of the characterized antigens (enolase, tryparedoxin peroxidase, eukaryotic initiation factor 5a, ß-tubulin, and one of the hypothetical proteins) were cloned in a prokaryotic expression vector, and the corresponding recombinant proteins were purified and evaluated for the serodiagnosis of TL. The antigens presented sensitivity and specificity values ranging from 95.4 to 100% and 82.5 to 100%, respectively. As a comparative antigen, a preparation of Leishmania extract showed sensitivity and specificity values of 65.1 and 57.5%, respectively. The present study has enabled the identification of proteins able to be employed for the serodiagnosis of TL.


Subject(s)
Bacterial Proteins/immunology , Leishmania braziliensis/immunology , Leishmaniasis, Cutaneous/diagnosis , Adult , Aged , Antigens, Bacterial/genetics , Bacterial Proteins/genetics , Cross Reactions , Enzyme-Linked Immunosorbent Assay/methods , Female , Humans , Leishmania braziliensis/chemistry , Leishmania braziliensis/genetics , Leishmaniasis, Cutaneous/immunology , Male , Middle Aged , Peroxidases/genetics , Proteomics/methods , Protozoan Proteins/genetics , Recombinant Proteins/immunology , Sensitivity and Specificity , Serologic Tests/methods
13.
Int J Biol Macromol ; 79: 903-12, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26071939

ABSTRACT

Hep1 is a mitochondrial Hsp70 (mtHsp70) co-chaperone that presents a zinc finger domain essential for its function. This co-chaperone acts to maintain mtHsp70 in its soluble and functional state. In this work, we have demonstrated that Leishmania braziliensis mtHsp70 (LbmtHsp70) is also dependent on the assistance of Hep1. To understand the L. braziliensis Hep1 (LbHep1) structure-function relationship, we produced LbHep1 and two truncated mutants corresponding to the C-terminal zinc finger domain and the N-terminal region. We observed that LbHep1 is composed of an unfolded N-terminal region and a ß-sheet-folded C-terminal domain, which holds the zinc-binding motif. Both LbHep1 and the zinc finger domain construction maintained LbmtHsp70 solubility in co-expression systems after cell lysis. In solution, LbHep1 behaved as a highly elongated monomer, probably due to the unfolded N-terminal region. Furthermore, we also observed that the zinc ion interacted with LbHep1 with high affinity and was critical for LbHep1 structure and stability because its removal from LbHep1 solutions altered the protein structure and stability. In vitro, LbHep1 protected, in sub-stoichiometric fashion, LbmtHsp70 from thermally induced aggregation but did not present intrinsic chaperone activity on model client proteins. Therefore, LbHep1 is a specific chaperone for LbmtHsp70.


Subject(s)
HSP70 Heat-Shock Proteins/chemistry , Mitochondrial Proteins/chemistry , Molecular Chaperones/chemistry , HSP70 Heat-Shock Proteins/metabolism , Leishmania braziliensis/chemistry , Mitochondria/chemistry , Mitochondria/genetics , Mitochondrial Proteins/genetics , Molecular Chaperones/genetics , Protein Binding , Protein Folding , Protein Structure, Secondary , Zinc Fingers/genetics
14.
Acta Crystallogr F Struct Biol Commun ; 71(Pt 5): 547-52, 2015 May.
Article in English | MEDLINE | ID: mdl-25945707

ABSTRACT

The enzyme dihydroorotate dehydrogenase (DHODH) is a flavoenzyme that catalyses the oxidation of dihydroorotate to orotate in the de novo pyrimidine-biosynthesis pathway. In this study, a reproducible protocol for the heterologous expression of active dihydroorotate dehydrogenase from Leishmania (Viannia) braziliensis (LbDHODH) was developed and its crystal structure was determined at 2.12 Å resolution. L. (V.) braziliensis is the species responsible for the mucosal form of leishmaniasis, a neglected disease for which no cure or effective therapy is available. Analyses of sequence, structural and kinetic features classify LbDHODH as a member of the class 1A DHODHs and reveal a very high degree of structural conservation with the previously reported structures of orthologous trypanosomatid enzymes. The relevance of nucleotide-biosynthetic pathways for cell metabolism together with structural and functional differences from the respective host enzyme suggests that inhibition of LbDHODH could be exploited for antileishmanicidal drug development. The present work provides the framework for further integrated in vitro, in silico and in vivo studies as a new tool to evaluate DHODH as a drug target against trypanosomatid-related diseases.


Subject(s)
Leishmania braziliensis/chemistry , Leishmania braziliensis/enzymology , Oxidoreductases Acting on CH-CH Group Donors/chemistry , Protozoan Proteins/chemistry , Protozoan Proteins/genetics , Amino Acid Sequence , Crystallization , Crystallography, X-Ray , Dihydroorotate Dehydrogenase , Leishmania braziliensis/genetics , Molecular Sequence Data , Oxidoreductases Acting on CH-CH Group Donors/genetics , Protein Structure, Secondary , Protein Structure, Tertiary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics
15.
BMC Struct Biol ; 15: 2, 2015 Feb 03.
Article in English | MEDLINE | ID: mdl-25643978

ABSTRACT

BACKGROUND: Nucleoside diphosphate kinase (NDK) is a housekeeping enzyme that plays key roles in nucleotide recycling and homeostasis in trypanosomatids. It is also secreted by the intracellular parasite Leishmania to modulate the host response. These functions make NDK an attractive target for drug design and for studies aiming at a better understanding of the mechanisms mediating host-pathogen interactions. RESULTS: We report the crystal structure and biophysical characterization of the NDK from Leishmania braziliensis (LbNDK). The subunit consists of six α-helices along with a core of four ß-strands arranged in a ß2ß3ß1ß4 antiparallel topology order. In contrast to the NDK from L. major, the LbNDK C-terminal extension is partially unfolded. SAXS data showed that LbNDK forms hexamers in solution in the pH range from 7.0 to 4.0, a hydrodynamic behavior conserved in most eukaryotic NDKs. However, DSF assays show that acidification and alkalization decrease the hexamer stability. CONCLUSIONS: Our results support that LbNDK remains hexameric in pH conditions akin to that faced by this enzyme when secreted by Leishmania amastigotes in the parasitophorous vacuoles (pH 4.7 to 5.3). The unusual unfolded conformation of LbNDK C-terminus decreases the surface buried in the trimer interface exposing new regions that might be explored for the development of compounds designed to disturb enzyme oligomerization, which may impair the important nucleotide salvage pathway in these parasites.


Subject(s)
Leishmania braziliensis/enzymology , Nucleoside-Diphosphate Kinase/chemistry , Protozoan Proteins/chemistry , Crystallography, X-Ray , Enzyme Stability , Hydrogen-Ion Concentration , Leishmania braziliensis/chemistry , Models, Molecular , Nucleoside-Diphosphate Kinase/genetics , Protein Multimerization , Protein Structure, Secondary , Protein Structure, Tertiary , Protein Unfolding , Protozoan Proteins/genetics , Scattering, Small Angle
16.
Appl Microbiol Biotechnol ; 99(3): 1323-36, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25359475

ABSTRACT

The correct and early identification of humans and dogs infected with Leishmania are key steps in the control of leishmaniasis. Additionally, a method with high sensitivity and specificity at low cost that allows the screening of a large number of samples would be extremely valuable. In this study, we analyzed the potential of mitogen-activated protein kinase 3 (MAPK3) and mitogen-activated protein kinase 4 (MAPK4) proteins from Leishmania braziliensis to serve as antigen candidates for the serodiagnosis of human visceral and tegumentary leishmaniasis, as well as canine visceral disease. Moreover, we mapped linear B-cell epitopes in these proteins and selected those epitopes with sequences that were divergent in the corresponding orthologs in Homo sapiens, in Canis familiaris, and in Trypanosoma cruzi. We compared the performance of these peptides with the recombinant protein using ELISA. Both MAPK3 and MAPK4 recombinant proteins showed better specificity in the immunodiagnosis of human and canine leishmaniasis than soluble parasite antigens and the EIE-leishmaniose-visceral-canina-bio-manguinhos (EIE-LVC) kit. Furthermore, the performance of this serodiagnosis assay was improved using synthetic peptides corresponding to B-cell epitopes derived from both proteins.


Subject(s)
Dog Diseases/parasitology , Epitopes, B-Lymphocyte/chemistry , Leishmania braziliensis/enzymology , Leishmaniasis/parasitology , Leishmaniasis/veterinary , Mitogen-Activated Protein Kinase 3/chemistry , Mitogen-Activated Protein Kinases/chemistry , Protozoan Proteins/chemistry , Amino Acid Sequence , Animals , Antibodies/analysis , Antibodies/immunology , Cell Line , Dog Diseases/diagnosis , Dog Diseases/immunology , Dogs , Epitope Mapping , Epitopes, B-Lymphocyte/genetics , Epitopes, B-Lymphocyte/immunology , Humans , Leishmania braziliensis/chemistry , Leishmania braziliensis/genetics , Leishmania braziliensis/immunology , Leishmaniasis/diagnosis , Leishmaniasis/immunology , Mitogen-Activated Protein Kinase 3/genetics , Mitogen-Activated Protein Kinase 3/immunology , Mitogen-Activated Protein Kinases/genetics , Mitogen-Activated Protein Kinases/immunology , Models, Molecular , Molecular Sequence Data , Protozoan Proteins/genetics , Protozoan Proteins/immunology , Sequence Alignment , Serologic Tests
17.
Parasit Vectors ; 7: 573, 2014 Dec 12.
Article in English | MEDLINE | ID: mdl-25498946

ABSTRACT

BACKGROUND: Replication factor A (RPA) is a single-strand DNA binding protein involved in DNA replication, recombination and repair processes. It is composed by the subunits RPA-1, RPA-2 and RPA-3; the major DNA-binding activity resides in the subunit 1 of the heterotrimeric RPA complex. In yeast and higher eukaryotes, besides the three basic structural DNA-binding domains, the RPA-1 subunit contains an N-terminal region involved in protein-protein interactions with a fourth DNA-binding domain. Remarkably, the N-terminal extension is absent in the RPA-1 of the pathogenic protozoan Leishmania (Leishmania) amazonensis; however, the protein maintains its ability to bind ssDNA. In a recent work, we identify Leishmania (Viannia) braziliensis RPA-1 by its specific binding to the untranslated regions of the HSP70 mRNAs, suggesting that this protein might be also an RNA-binding protein. METHODS: Both rLbRPA-1 purified by His-tag affinity chromatography as well as the in vitro transcribed L. braziliensis 3' HSP70-II UTR were used to perform pull down assays to asses nucleic acid binding properties. Also, homology modeling was carried out to construct the LbRPA-1 tridimensional structure to search relevant amino acid residues to bind nucleic acids. RESULTS: In this work, after obtaining the recombinant L. braziliensis RPA-1 protein under native conditions, competitive and non-competitive pull-down assays confirmed the single-stranded DNA binding activity of this protein and demonstrated its interaction with the 3' UTR from the HSP70-II mRNA. As expected, this protein exhibits a high affinity for ssDNA, but we have found that RPA-1 interacts also with RNA. Additionally, we carried out a structural analysis of L. braziliensis RPA-1 protein using the X-ray diffraction structure of Ustilago maydis homologous protein as a template. Our results indicate that, in spite of the evolutionary divergence between both organisms, the structure of these two RPA-1 proteins seems to be highly conserved. CONCLUSION: The LbRPA-1 protein is a ssDNA binding protein, but also it shows affinity in vitro for the HSP70 mRNA; this finding supports a possible in vivo role in the HSP70 mRNA metabolism. On the other hand, the three dimensional model of Leishmania RPA-1 serves as a starting point for both functional analysis and its exploration as a chemotherapeutic target to combat leishmaniasis.


Subject(s)
DNA-Binding Proteins/metabolism , DNA/metabolism , Leishmania braziliensis/enzymology , Leishmaniasis, Cutaneous/metabolism , Leishmaniasis, Cutaneous/parasitology , Protozoan Proteins/metabolism , RNA/metabolism , Replication Protein A/metabolism , Amino Acid Sequence , DNA/genetics , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , HSP72 Heat-Shock Proteins/genetics , HSP72 Heat-Shock Proteins/metabolism , Humans , Kinetics , Leishmania braziliensis/chemistry , Leishmania braziliensis/genetics , Leishmaniasis, Cutaneous/genetics , Models, Molecular , Molecular Sequence Data , Protein Binding , Protein Subunits/chemistry , Protein Subunits/genetics , Protein Subunits/metabolism , Protozoan Proteins/chemistry , Protozoan Proteins/genetics , RNA/genetics , Replication Protein A/chemistry , Replication Protein A/genetics , Sequence Alignment
18.
BMC Res Notes ; 7: 70, 2014 Feb 01.
Article in English | MEDLINE | ID: mdl-24484604

ABSTRACT

BACKGROUND: It has been reported that repeated intravenous injections of a relatively large amount of Leishmania amazonensis amastigote extract (LaE) in BALB/c mice exacerbates the infection of these mice by Leishmania braziliensis. The identification of the extract active principle(s) through physicochemical purification often involves dilution and losses of protein in the course of successive purification procedures. The large amount of the extract required to induce the phenomenon, therefore, hinders the carrying out of experiments aimed at identifying the active molecule(s) through extract purification. In the present work, a dose-response experiment was done to find out if smaller amounts of LaE than that necessary to be used by the intravenous route would reproduce the phenomenon when injected by the intradermal route. In addition, it was also investigated whether a Leishmania braziliensis amastigote extract (LbE) would exert the same effect and whether the effect would occur in C57BL/6 mice. RESULTS: It was found that a single injection of either LaE or LbE containing 5 µg of protein was capable of enhancing the infection in BALB/c but not in C57BL/6 mice. In addition, it was observed that the largest tested doses of LbE (containing 30 and 180 µg of protein) failed to enhance the infection by L. braziliensis, whereas all doses of LaE enhanced equally that infection. CONCLUSIONS: Those results indicate the possible existence in LbE, and not in LaE, of molecules that interfere with the extract infection-enhancing activity when it is injected in large amounts, and that the inoculation of Leishmania extracts through the intravenous and intradermal routes potentiate the infection by L. braziliensis through the same mechanism.


Subject(s)
Leishmania/pathogenicity , Leishmaniasis, Cutaneous/parasitology , Protozoan Proteins/pharmacology , Tissue Extracts/pharmacology , Animals , Disease Susceptibility , Dose-Response Relationship, Drug , Injections, Intradermal , Injections, Intravenous , Leishmania/chemistry , Leishmania/genetics , Leishmania braziliensis/chemistry , Leishmania braziliensis/growth & development , Leishmaniasis, Cutaneous/immunology , Leishmaniasis, Cutaneous/pathology , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Protozoan Proteins/administration & dosage , Species Specificity , Specific Pathogen-Free Organisms , Tissue Extracts/administration & dosage , Virulence/drug effects
19.
Mol Biochem Parasitol ; 190(2): 63-75, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23831370

ABSTRACT

The emergence of drug-resistant Leishmania species is a significant problem in several countries. A comparative proteomic analysis of antimony-susceptible and antimony-resistant Leishmania braziliensis (LbSbR) and Leishmania infantum chagasi (LcSbR) lines was carried out using two-dimensional gel electrophoresis (2-DE) followed by mass spectrometry (LC/MS/MS) for protein identification. Out of 132 protein spots exclusive or up-regulated submitted to MS, we identified 80 proteins that corresponded to 57 distinct proteins. Comparative analysis of data showed that most of the protein spots with differential abundance in both species are involved in antioxidant defense, general stress response, glucose and amino acid metabolism, and cytoskeleton organization. Five proteins were commonly more abundant in both SbIII-resistant Leishmania lines: tryparedoxin peroxidase, alpha-tubulin, HSP70, HSP83, and HSP60. Analysis of the protein abundance by Western blotting assays confirmed our proteomic data. These assays revealed that cyclophilin-A is less expressed in both LbSbR and LcSbR lines. On the other hand, the expression of pteridine reductase is higher in the LbSbR line, whereas tryparedoxin peroxidase is overexpressed in both LbSbR and LcSbR lines. Together, these results show that the mechanism of antimony-resistance in Leishmania spp. is complex and multifactorial.


Subject(s)
Antimony/toxicity , Drug Resistance , Leishmania braziliensis/chemistry , Leishmania braziliensis/drug effects , Leishmania infantum/chemistry , Leishmania infantum/drug effects , Proteome/analysis , Electrophoresis, Gel, Two-Dimensional , Mass Spectrometry , Proteomics , Protozoan Proteins/analysis
20.
PLoS Negl Trop Dis ; 6(2): e1543, 2012.
Article in English | MEDLINE | ID: mdl-22389743

ABSTRACT

The essential role of the lipophosphoglycan (LPG) of Leishmania in innate immune response has been extensively reported. However, information about the role of the LPG-related glycoinositolphospholipids (GIPLs) is limited, especially with respect to the New World species of Leishmania. GIPLs are low molecular weight molecules covering the parasite surface and are similar to LPG in sharing a common lipid backbone and a glycan motif containing up to 7 sugars. Critical aspects of their structure and functions are still obscure in the interaction with the vertebrate host. In this study, we evaluated the role of those molecules in two medically important South American species Leishmania infantum and L. braziliensis, causative agents of visceral (VL) and cutaneous Leishmaniasis (CL), respectively. GIPLs derived from both species did not induce NO or TNF-α production by non-primed murine macrophages. Additionally, primed macrophages from mice (BALB/c, C57BL/6, TLR2-/- and TLR4-/-) exposed to GIPLs from both species, with exception to TNF-α, did not produce any of the cytokines analyzed (IL1-ß, IL-2, IL-4, IL-5, IL-10, IL-12p40, IFN-γ) or p38 activation. GIPLs induced the production of TNF-α and NO by C57BL/6 mice, primarily via TLR4. Pre incubation of macrophages with GIPLs reduced significantly the amount of NO and IL-12 in the presence of IFN-γ or lipopolysaccharide (LPS), which was more pronounced with L. braziliensis GIPLs. This inhibition was reversed after PI-specific phospholipase C treatment. A structural analysis of the GIPLs showed that L. infantum has manose rich GIPLs, suggestive of type I and Hybrid GIPLs while L. braziliensis has galactose rich GIPLs, suggestive of Type II GIPLs. In conclusion, there are major differences in the structure and composition of GIPLs from L. braziliensis and L. infantum. Also, GIPLs are important inhibitory molecules during the interaction with macrophages.


Subject(s)
Glycosphingolipids/chemistry , Glycosphingolipids/immunology , Immunity, Innate , Leishmania braziliensis/chemistry , Leishmania braziliensis/immunology , Leishmania infantum/chemistry , Leishmania infantum/immunology , Animals , Carbohydrates/analysis , Cytokines/biosynthesis , Glycosphingolipids/isolation & purification , Macrophages/immunology , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Knockout , Nitric Oxide/metabolism
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