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1.
Cell Cycle ; 15(11): 1405-9, 2016 06 02.
Article in English | MEDLINE | ID: mdl-27097296

ABSTRACT

Numerous regulatory factors in epidermal differentiation and their role in regulating different cell states have been identified in recent years. However, the genetic interactions between these regulators over the dynamic course of differentiation have not been studied. In this Extra-View article, we review recent work by Lopez-Pajares et al. that explores a new regulatory network in epidermal differentiation. They analyze the changing transcriptome throughout epidermal regeneration to identify 3 separate gene sets enriched in the progenitor, early and late differentiation states. Using expression module mapping, MAF along with MAFB, are identified as transcription factors essential for epidermal differentiation. Through double knock-down of MAF:MAFB using siRNA and CRISPR/Cas9-mediated knockout, epidermal differentiation was shown to be impaired both in-vitro and in-vivo, confirming MAF:MAFB's role to activate genes that drive differentiation. Lopez-Pajares and collaborators integrated 42 published regulator gene sets and the MAF:MAFB gene set into the dynamic differentiation gene expression landscape and found that lncRNAs TINCR and ANCR act as upstream regulators of MAF:MAFB. Furthermore, ChIP-seq analysis of MAF:MAFB identified key transcription factor genes linked to epidermal differentiation as downstream effectors. Combined, these findings illustrate a dynamically regulated network with MAF:MAFB as a crucial link for progenitor gene repression and differentiation gene activation.


Subject(s)
Epithelial Cells/metabolism , Gene Expression Regulation, Developmental , MafB Transcription Factor/genetics , Proto-Oncogene Proteins c-maf/genetics , Stem Cells/metabolism , Animals , CRISPR-Cas Systems , Cell Differentiation , Cytoskeletal Proteins/genetics , Cytoskeletal Proteins/metabolism , Enhancer of Zeste Homolog 2 Protein/genetics , Enhancer of Zeste Homolog 2 Protein/metabolism , Epidermal Cells , Epidermis/metabolism , Epithelial Cells/cytology , Gene Regulatory Networks , Humans , MafB Transcription Factor/antagonists & inhibitors , MafB Transcription Factor/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism , Proto-Oncogene Proteins c-maf/antagonists & inhibitors , Proto-Oncogene Proteins c-maf/metabolism , RNA, Long Noncoding/genetics , RNA, Long Noncoding/metabolism , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , RNA-Binding Proteins/genetics , RNA-Binding Proteins/metabolism , Signal Transduction , Stem Cells/cytology
2.
BMC Cancer ; 15: 461, 2015 Jun 09.
Article in English | MEDLINE | ID: mdl-26055874

ABSTRACT

BACKGROUND: Mounting evidence suggests that miRNAs have major functions in tumor pathogenesis, and this study aimed to identify the candidate miRNA and investigate its role in nasopharyngeal carcinoma (NPC). METHODS: MiRNA and mRNA expressions were screened by microarray assays. The cell proliferation, colony formation and migration ability were measured by MTT, soft agar and wound healing assays, respectively. The tumor growth suppression was evaluated by xenografting in nude mice. The plasma miR-223 levels in NPC patients were detected by TaqMan analysis. Real-time quantitative PCR and Western blotting were used to confirm miR-223 and MAFB expression levels. The targeting relationship between miR-223 and MAFB was verified using dual luciferase reporter assay. RESULTS: The miR-223 expression was decreased in CNE-1, CNE-2 cells as compared with NP69 cells, an immortalized human nasopharyngeal epithelial cell line, and its level also reduced in NPC patients' plasma as compared with healthy controls. Exogenous expression of miR-223 in CNE-2 cells could inhibit cell proliferation both in vitro and in vivo. Extrogenous miR-223 in CNE-2 cells would decrease the ability of colony formation and migration. MAFB, a transcription factor of Maf family members, was identified as a target gene of miR-223. We found that migration and invasion abilities were inhibited by MAFB silencing. CONCLUSIONS: MiR-223 negatively regulates the growth and migration of NPC cells via reducing MAFB expression, and this finding provides a novel insight into understanding miR-223 regulation mechanism in nasopharyngeal carcinoma tumorigenesis.


Subject(s)
Cell Proliferation/genetics , MafB Transcription Factor/biosynthesis , MicroRNAs/genetics , Nasopharyngeal Neoplasms/genetics , Animals , Carcinogenesis , Carcinoma , Cell Line, Tumor , Cell Movement/genetics , Gene Expression Regulation, Neoplastic , Humans , MafB Transcription Factor/antagonists & inhibitors , MafB Transcription Factor/genetics , Mice , MicroRNAs/biosynthesis , MicroRNAs/blood , Nasopharyngeal Carcinoma , Nasopharyngeal Neoplasms/blood , Nasopharyngeal Neoplasms/pathology , RNA, Messenger/biosynthesis , Xenograft Model Antitumor Assays
3.
PLoS One ; 8(12): e83980, 2013.
Article in English | MEDLINE | ID: mdl-24391856

ABSTRACT

MicroRNA-199a (miRNA-199a) has been shown to have comprehensive functions and behave differently in different systems and diseases. It is encoded by two loci in the human genome, miR-199a-1 in chromosome 19 and miR-199a-2 in chromosome 1. Both loci give rise to the same miRNAs (miR-199a-5p and miR-199a-3p). The cause of the diverse action of the miRNA in different systems is not clear. However, it is likely due to different regulation of the two genomic loci and variable targets of the miRNA in different cells and tissues. Here we studied promoter methylation of miR-199a in testicular germ cell tumors (TGCTs) and glioblastomas (gliomas) and discovered that hypermethylation in TGCTs of both miR-199a-1 and -2 resulted in its reduced expression, while hypomethylation of miR-199a-2 but not -1 in gliomas may be related to its elevated expression. We also identified a common regulator, REST, which preferentially bound to the methylated promoters of both miR-199a-1 and miR-199a-2. The action of miR-199a is dependent on its downstream targets. We identified MAFB as a putative target of miRNA-199a-5p in TGCTs and confirmed that the tumor suppression activity of the microRNA is mediated by its target MAFB. By studying the mechanisms that control the expressions of miR-199a and its various downstream targets, we hope to use miR-199a as a model to understand the complexity of miRNA biology.


Subject(s)
DNA Methylation , Gene Expression Regulation, Neoplastic , Glioblastoma/genetics , MafB Transcription Factor/metabolism , MicroRNAs/genetics , Neoplasms, Germ Cell and Embryonal/genetics , Promoter Regions, Genetic/genetics , Testicular Neoplasms/genetics , Biomarkers, Tumor/genetics , Biomarkers, Tumor/metabolism , Blotting, Western , Brain/metabolism , Cell Proliferation , Chromatin Immunoprecipitation , Gene Expression Profiling , Humans , Immunoenzyme Techniques , MafB Transcription Factor/antagonists & inhibitors , MafB Transcription Factor/genetics , Male , Oligonucleotide Array Sequence Analysis , RNA, Messenger/genetics , RNA, Small Interfering/genetics , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Testis/metabolism , Tumor Cells, Cultured
4.
Cell Death Differ ; 13(10): 1686-96, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16456583

ABSTRACT

Upregulation of specific transcription factors is a generally accepted mechanism to explain the commitment of hematopoietic stem cells along precise maturation lineages. Based on this premise, transduction of primary hematopoietic stem/progenitor cells with viral vectors containing the investigated transcription factors appears as a suitable experimental model to identify such regulators. Although MafB transcription factor is believed to play a role in the regulation of monocytic commitment, no demonstration is, to date, available supporting this function in normal human hematopoiesis. To address this issue, we retrovirally transduced cord blood CD34+ hematopoietic progenitors with a MafB cDNA. Immunophenotypic and morphological analysis of transduced cells demonstrated the induction of a remarkable monomacrophage differentiation. Microarray analysis confirmed these findings and disclosed the upregulation of macrophage-related transcription factors belonging to the AP-1, MAF, PPAR and MiT families. Altogether our data allow to conclude that MafB is a key regulator of human monocytopoiesis.


Subject(s)
Hematopoietic Stem Cells/cytology , Hematopoietic Stem Cells/metabolism , MafB Transcription Factor/genetics , MafB Transcription Factor/metabolism , Monocytes/cytology , Monocytes/metabolism , Antigens, CD34/metabolism , Cell Line , Colony-Forming Units Assay , DNA, Complementary/genetics , Fetal Blood/cytology , Fetal Blood/immunology , Fetal Blood/metabolism , Gene Expression Profiling , Hematopoietic Stem Cells/immunology , Humans , In Vitro Techniques , Infant, Newborn , MafB Transcription Factor/antagonists & inhibitors , Monocytes/immunology , Myelopoiesis , Oligonucleotide Array Sequence Analysis , RNA, Small Interfering/genetics , Retroviridae/genetics , Transduction, Genetic , Up-Regulation
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