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1.
Mol Cell Biol ; 32(23): 4861-76, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23028048

ABSTRACT

The histone demethylase LSD1, a component of the CoREST (corepressor for element 1-silencing transcription factor) corepressor complex, plays an important role in the downregulation of gene expression during development. However, the activities of LSD1 in mediating short-time-scale gene expression changes have not been well understood. To reveal the mechanisms underlying these two distinct functions of LSD1, we performed genome-wide mapping and cellular localization studies of LSD1 and its dimethylated histone 3 lysine 4 (substrate H3K4me2) in mouse embryonic stem cells (ES cells). Our results showed an extensive overlap between the LSD1 and H3K4me2 genomic regions and a correlation between the genomic levels of LSD1/H3K4me2 and gene expression, including many highly expressed ES cell genes. LSD1 is recruited to the chromatin of cells in the G(1)/S/G(2) phases and is displaced from the chromatin of M-phase cells, suggesting that LSD1 or H3K4me2 alternatively occupies LSD1 genomic regions during cell cycle progression. LSD1 knockdown by RNA interference or its displacement from the chromatin by antineoplastic agents caused an increase in the levels of a subset of LSD1 target genes. Taken together, these results suggest that cell cycle-dependent association and dissociation of LSD1 with chromatin mediates short-time-scale gene expression changes during embryonic stem cell cycle progression.


Subject(s)
Cell Cycle , Embryonic Stem Cells/cytology , Gene Expression Regulation, Developmental , Oxidoreductases, N-Demethylating/metabolism , Animals , Cell Line , Embryonic Stem Cells/metabolism , Histone Demethylases , Histones/genetics , Histones/metabolism , Mice , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/genetics , Promoter Regions, Genetic
2.
Antivir Ther ; 16(8): 1287-95, 2011.
Article in English | MEDLINE | ID: mdl-22155910

ABSTRACT

BACKGROUND: Alternatives to the available stavudine-containing paediatric fixed-dose combination (FDC) tablets are rapidly needed due to concerns regarding the cumulative toxicity of long-term stavudine exposure. We report the bioavailability and short-term safety of a novel paediatric FDC tablet of zidovudine (ZDV)/lamivudine (3TC)/nevirapine (NVP; 30/15/28 mg) in HIV-infected children. METHODS: In this Phase I/II open-label pharmacokinetic study, 42 children weighing 6-30 kg treated with NVP-based HAART for ≥4 weeks were randomized to receive the FDC tablets (GPO-VIR Z30) or the liquid formulations. Dosing was weight-based. Intensive 12-h blood sampling was performed after 2 weeks; subjects then crossed-over to the alternate formulation at equal doses and sampling repeated 2 weeks later. Pharmacokinetic parameters were determined by non-compartmental analysis. Buccal-swab samples were collected for cytochrome P450 (CYP)2B6 polymorphism analysis. RESULTS: With the FDC tablet, the geometric mean (90% CI) area under the curve (AUC) for ZDV, 3TC and NVP was 1.58 (1.49-1.68), 7.78 (7.38-8.19) and 68.88 (62.13-76.36) µg•h/ml, respectively. Rules for NVP therapeutic inadequacy were defined a priori, and despite lower NVP exposure with the tablet (P<0.001), the levels remained therapeutically adequate. ZDV AUC was similar between formulations. 3TC exposure was significantly higher with the tablet but comparable to historical data in adults and children taking branded tablets. While receiving the tablet, NVP AUC in children with CYP2B 516 GG (45%), GT (45%) and TT (10%) genotypes were 67.0, 74.5 and 106.4 µg•h/ml, respectively (P=0.04). CONCLUSIONS: Disparities in drug exposure between formulations were observed; however, the FDC tablet delivered therapeutically adequate exposures of each drug and could well play an important role in simplifying antiretroviral treatment for children.


Subject(s)
Drug Therapy, Combination/methods , HIV Infections/drug therapy , HIV/drug effects , Lamivudine/blood , Nevirapine/blood , Zidovudine/blood , Anti-HIV Agents/blood , Anti-HIV Agents/pharmacokinetics , Area Under Curve , Aryl Hydrocarbon Hydroxylases/analysis , Aryl Hydrocarbon Hydroxylases/genetics , Biological Availability , Body Weight , Child , Child, Preschool , Cytochrome P-450 CYP2B6 , Drug Administration Schedule , Drug Combinations , Drug Dosage Calculations , Drug-Related Side Effects and Adverse Reactions , Female , HIV/physiology , HIV Infections/blood , HIV Infections/virology , Humans , Infant , Lamivudine/pharmacokinetics , Male , Nevirapine/pharmacokinetics , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/genetics , Reverse Transcriptase Inhibitors/blood , Reverse Transcriptase Inhibitors/pharmacokinetics , Tablets , Zidovudine/pharmacokinetics
3.
EMBO J ; 29(9): 1510-22, 2010 May 05.
Article in English | MEDLINE | ID: mdl-20379134

ABSTRACT

The rate-limiting step in ribosome biogenesis is the transcription of ribosomal RNA, which is controlled by environmental conditions. The JmjC enzyme KDM2A/JHDM1A/FbxL11 demethylates mono- and dimethylated Lys 36 of histone H3, but its function is unclear. Here, we show that KDM2A represses the transcription of ribosomal RNA. KDM2A was localized in nucleoli and bound to the ribosomal RNA gene promoter. Overexpression of KDM2A repressed the transcription of ribosomal RNA in a demethylase activity-dependent manner. When ribosomal RNA transcription was reduced under starvation, a cell-permeable succinate that inhibited the demethylase activity of KDM2A prevented the reduction of ribosomal RNA transcription. Starvation reduced the levels of mono- and dimethylated Lys 36 of histone H3 marks on the rDNA promoter, and treatment with the cell-permeable succinate suppressed the reduction of the marks during starvation. The knockdown of KDM2A increased mono- and dimethylated Lys 36 of histone H3 marks, and suppressed the reduction of ribosomal RNA transcription under starvation. These results show a novel mechanism by which KDM2A activity is stimulated by starvation to reduce ribosomal RNA transcription.


Subject(s)
Oxidoreductases, N-Demethylating/metabolism , RNA, Ribosomal/genetics , Transcription, Genetic , Cell Line, Tumor , Cell Nucleolus/metabolism , DNA, Ribosomal/genetics , DNA, Ribosomal/metabolism , F-Box Proteins , Gene Expression Regulation , Genes, rRNA , Histones/metabolism , Humans , Jumonji Domain-Containing Histone Demethylases/metabolism , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/genetics , Promoter Regions, Genetic , Protein Binding
4.
Cancer Res ; 69(5): 2065-71, 2009 Mar 01.
Article in English | MEDLINE | ID: mdl-19223552

ABSTRACT

Aberrant epigenetic changes in DNA methylation and histone acetylation are hallmarks of most cancers, whereas histone methylation was previously considered to be irreversible and less versatile. Recently, several histone demethylases were identified catalyzing the removal of methyl groups from histone H3 lysine residues and thereby influencing gene expression. Neuroblastomas continue to remain a clinical challenge despite advances in multimodal therapy. Here, we address the functional significance of the chromatin-modifying enzyme lysine-specific demethylase 1 (LSD1) in neuroblastoma. LSD1 expression correlated with adverse outcome and was inversely correlated with differentiation in neuroblastic tumors. Differentiation of neuroblastoma cells resulted in down-regulation of LSD1. Small interfering RNA-mediated knockdown of LSD1 decreased cellular growth, induced expression of differentiation-associated genes, and increased target gene-specific H3K4 methylation. Moreover, LSD1 inhibition using monoamine oxidase inhibitors resulted in an increase of global H3K4 methylation and growth inhibition of neuroblastoma cells in vitro. Finally, targeting LSD1 reduced neuroblastoma xenograft growth in vivo. Here, we provide the first evidence that a histone demethylase, LSD1, is involved in maintaining the undifferentiated, malignant phenotype of neuroblastoma cells. We show that inhibition of LSD1 reprograms the transcriptome of neuroblastoma cells and inhibits neuroblastoma xenograft growth. Our results suggest that targeting histone demethylases may provide a novel option for cancer therapy.


Subject(s)
Neuroblastoma/enzymology , Oxidoreductases, N-Demethylating/physiology , Animals , Cell Differentiation , Cell Line, Tumor , Epigenesis, Genetic , Female , Histone Demethylases , Humans , Mice , Monoamine Oxidase Inhibitors/therapeutic use , Neuroblastoma/pathology , Neuroblastoma/therapy , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/antagonists & inhibitors , Oxidoreductases, N-Demethylating/genetics , RNA, Small Interfering/genetics , Xenograft Model Antitumor Assays
5.
Curr Protoc Toxicol ; Chapter 4: Unit4.27, 2009.
Article in English | MEDLINE | ID: mdl-23045012

ABSTRACT

Cytochrome P450 2B6 (CYP2B6) is responsible for the metabolism of a number of therapeutically relevant drugs and environmental chemicals. While not as frequently involved in xenobiotic metabolism as other more commonly studied P450 enzymes such as CYP3A, CYP2D6, or CYP2C9, its importance is becoming increasingly realized. Bupropion hydroxylase activity is an excellent indicator of in vitro CYP2B6 activity, and the metabolite formed is easily measured by HPLC/MS/MS. This assay allows the use of very low concentrations of human liver microsomes or recombinant enzyme, and it represents a selective, sensitive approach to assessing in vitro CYP2B6 activity, with minimal sample preparation.


Subject(s)
Aryl Hydrocarbon Hydroxylases/metabolism , Microsomes, Liver/enzymology , Oxidoreductases, N-Demethylating/metabolism , Aryl Hydrocarbon Hydroxylases/analysis , Aryl Hydrocarbon Hydroxylases/antagonists & inhibitors , Biological Assay , Bupropion/metabolism , Cytochrome P-450 CYP2B6 , Enzyme Inhibitors/pharmacology , Humans , Hydroxylation/drug effects , Hydroxylation/physiology , Microsomes, Liver/drug effects , Oxidation-Reduction , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/antagonists & inhibitors , Recombinant Proteins/metabolism
6.
Curr Drug Metab ; 9(7): 598-610, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18781911

ABSTRACT

Human CYP2B6 has been thought to account for a minor portion (<1%) of total hepatic cytochrome P450 (CYP) content and to have a minor function in human drug metabolism. Recent studies, however, indicate that the average relative contribution of CYP2B6 to total hepatic CYP content ranges from 2% to 10%. An increased interest in CYP2B6 research has been stimulated by the identification of an ever-increasing substrate list for this enzyme, polymorphic and ethnic variations in expression levels, and evidence for cross-regulation with CYP3A4, UGT1A1 and several hepatic drug transporters by the nuclear receptors pregnane X receptor and constitutive androstane receptor. Moreover, 20- to 250-fold interindividual variation in CYP2B6 expression has been demonstrated, presumably due to transcriptional regulation and polymorphisms. These individual differences may result in variable systemic exposure to drugs metabolized by CYP2B6, including the antineoplastics cyclophosphamide and ifosfamide, the antiretrovirals nevirapine and efavirenz, the anesthetics propofol and ketamine, the synthetic opioid methadone, and the anti-Parkinsonian selegiline. The potential clinical significance of CYP2B6 further enforces the need for a comprehensive review of this xenobiotic metabolizing enzyme. This communication summarizes recent advances in our understanding of this traditionally neglected enzyme and provides an overall picture of CYP2B6 with respect to expression, localization, substrate-specificity, inhibition, regulation, polymorphisms and clinical significance. Emphasis is given to nuclear receptor mediated transcriptional regulation, genetic polymorphisms, and their clinical significance.


Subject(s)
Aryl Hydrocarbon Hydroxylases/physiology , Oxidoreductases, N-Demethylating/physiology , Animals , Aryl Hydrocarbon Hydroxylases/analysis , Aryl Hydrocarbon Hydroxylases/genetics , Cytochrome P-450 CYP2B6 , Gene Expression Regulation, Enzymologic , Humans , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/genetics , Polymorphism, Single Nucleotide , Promoter Regions, Genetic , Receptors, Cytoplasmic and Nuclear/physiology , Response Elements
7.
Proteins ; 71(4): 2065-75, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18186483

ABSTRACT

The X-ray structure of monomeric N-methyltryptophan oxidase from Escherichia coli (MTOX) has been solved at 3.2 A resolution by molecular replacement methods using Bacillus sp. sarcosine oxidase structure (MSOX, 43% sequence identity) as search model. The analysis of the substrate binding site highlights the structural determinants that favour the accommodation of the bulky N-methyltryptophan residue in MTOX. In fact, although the nature and geometry of the catalytic residues within the first contact shell of the FAD moiety appear to be virtually superposable in MTOX and MSOX, the presence of a Thr residue in position 239 in MTOX (Met245 in MSOX) located at the entrance of the active site appears to play a key role for the recognition of the amino acid substrate side chain. Accordingly, a 15 fold increase in k(cat) and 100 fold decrease in K(m) for sarcosine as substrate has been achieved in MTOX upon T239M mutation, with a concomitant three-fold decrease in activity towards N-methyltryptophan. These data provide clear evidence for the presence of a catalytic core, common to the members of the methylaminoacid oxidase subfamily, and of a side chain recognition pocket, located at the entrance of the active site, that can be adjusted to host diverse aminoacids in the different enzyme species. The site involved in the covalent attachment of flavin has also been addressed by screening degenerate mutants in the relevant positions around Cys308-FAD linkage. Lys341 appears to be the key residue involved in flavin incorporation and covalent linkage.


Subject(s)
Escherichia coli Proteins/analysis , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/metabolism , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/chemistry , Oxidoreductases, N-Demethylating/metabolism , Amino Acid Sequence , Binding Sites , Catalysis , Catalytic Domain , Crystallography, X-Ray , Escherichia coli/enzymology , Escherichia coli/genetics , Escherichia coli Proteins/genetics , Escherichia coli Proteins/isolation & purification , Flavin-Adenine Dinucleotide/metabolism , Kinetics , Models, Molecular , Molecular Sequence Data , Molecular Weight , Mutation , Oxidoreductases, N-Demethylating/genetics , Oxidoreductases, N-Demethylating/isolation & purification , Protein Binding , Protein Structure, Secondary , Protein Structure, Tertiary , Sequence Homology, Amino Acid , Spectrophotometry, Ultraviolet , Spectrum Analysis, Raman , Substrate Specificity , Threonine/chemistry
8.
Biol Reprod ; 77(5): 754-64, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17634443

ABSTRACT

Spermatogenesis is a highly complex cell differentiation process that is governed by unique transcriptional regulation and massive chromatin alterations, which are required for meiosis and postmeiotic maturation. The underlying mechanisms involve alterations to the epigenetic layer, including histone modifications and incorporation of testis-specific nuclear proteins, such as histone variants and protamines. Histones can undergo methylation, acetylation, and phosphorylation among other modifications at their N-terminus, and these modifications can signal changes in chromatin structure. We have identified the temporal and spatial distributions of histone H3 mono-, di-, and trimethylation at lysine 4 (K4), and the lysine-specific histone demethylase AOF2 (amine oxidase flavin-containing domain 2, previously known as LSD1) during mammalian spermatogenesis. Our results reveal tightly regulated distributions of H3-K4 methylation and AOF2, and that H3-K4 methylation is very similar between the mouse and the marmoset. The AOF2 protein levels were found to be higher in the testes than in the somatic tissues. The distribution of AOF2 matched the cell- and stage-specific patterns of H3-K4 methylation. Interaction studies revealed unique epigenetic regulatory complexes associated with H3-K4 methylation in the testis, including the association of AOF2 and methyl-CpG-binding domain protein 2 (MBD2a/b) in a complex with histone deacetylase 1 (HDAC1). These studies enhance our understanding of epigenetic modifications and their roles in chromatin organization during male germ cell differentiation in both normal and pathologic states.


Subject(s)
Histones/metabolism , Lysine/metabolism , Spermatogenesis , Testis/metabolism , Animals , Callithrix , Histone Deacetylase 1 , Histone Deacetylases/analysis , Histone Deacetylases/metabolism , Histone Demethylases , Histones/analysis , Male , Methylation , Mice , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/metabolism , Testis/cytology
9.
Methods ; 40(4): 318-26, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17101443

ABSTRACT

Posttranslational histone modifications play an important role in regulating chromatin dynamics and function. One of the modifications, methylation, occurs on both lysine and arginine residues and participates in diverse range of biological processes including heterochromatin formation, X-chromosome inactivation, and transcriptional regulation. While acetylation, phosphorylation, and ubiquitylation are dynamically regulated by enzymes that catalyze the addition and removal of a particular modification, enzymes that are capable of removing methyl groups were not known until recently. Thus far, two families of histone demethylases with distinct cofactor requirements and reaction mechanisms have been identified. One is the FAD (flavin adenine dinucleotide)-dependent amine oxidase family LSD1 (lysine-specific demethylase), the other is the Fe(II) and alpha-KG (alpha-ketoglutarate)-dependent dioxygenase family JHDM (JmjC domain-containing histone demethylase). Identification and characterization of these histone demethylases is an important step towards understanding both the function and regulation of histone methylation. Here, we describe assays currently used for measuring histone demethylase activity and chromatography strategies used in purifying histone demethylases from HeLa cells.


Subject(s)
Histones/metabolism , Multiprotein Complexes/isolation & purification , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/isolation & purification , Chromatography/methods , F-Box Proteins , HeLa Cells , Histone Demethylases , Humans , Jumonji Domain-Containing Histone Demethylases , Methylation
10.
Br J Pharmacol ; 148(6): 786-94, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16751792

ABSTRACT

1. CYP2B6 is a drug-metabolizing enzyme expressed in the liver and brain that can metabolize bupropion (Zyban), a smoking cessation drug), activate tobacco-smoke nitrosamines, and inactivate nicotine. Hepatic CYP2B6 is induced by phenobarbital and induction may affect in vivo nicotine disposition, while brain CYP2B6 induction may affect local levels of centrally acting substrates. We investigated the effect of chronic phenobarbital treatment on induction of in vivo nicotine disposition and CYP2B6 expression in the liver and brain of African Green (Vervet) monkeys. 2. Monkeys were split into two groups (n=6 each) and given oral saccharin daily for 22 days; one group was supplemented with 20 mg kg(-1) phenobarbital. Monkeys were given a 0.1 mg kg(-1) nicotine dose subcutaneously before and after treatment. 3. Phenobarbital treatment resulted in a significant, 56%, decrease (P=0.04) in the maximum nicotine plasma concentration and a 46% decrease (P=0.003) in the area under the concentration-time curve. Phenobarbital also increased hepatic CYP2B6 protein expression. In monkey brain, significant induction (P<0.05) of CYP2B6 protein levels was observed in all regions tested (caudate, putamen, hippocampus, cerebellum, brain stem and frontal cortex) ranging from 2-fold to 150-fold. CYP2B6 expression was induced in specific cells, such as frontal cortical pyramidal cells and thalamic neurons. 4. In conclusion, chronic phenobarbital treatment in monkeys resulted in increased in vivo nicotine disposition, and induced hepatic and brain CYP2B6 protein levels and cellular expression. This induction may alter the metabolism of CYP2B6 substrates including peripherally acting drugs such as cyclophosphamide and centrally acting drugs such as bupropion, ecstasy and phencyclidine.


Subject(s)
Aryl Hydrocarbon Hydroxylases/biosynthesis , Brain/enzymology , Liver/enzymology , Nicotine/pharmacokinetics , Oxidoreductases, N-Demethylating/biosynthesis , Phenobarbital/pharmacology , Animals , Aryl Hydrocarbon Hydroxylases/analysis , Chlorocebus aethiops , Cytochrome P-450 CYP2B6 , Enzyme Induction/drug effects , Immunohistochemistry , Male , Oxidoreductases, N-Demethylating/analysis
11.
Biochem Biophys Res Commun ; 333(2): 359-66, 2005 Jul 29.
Article in English | MEDLINE | ID: mdl-15946648

ABSTRACT

Sarcosine oxidase from Corynebacterium sp. U-96 is a heterotetrameric enzyme. Here we report the crystal structures of the enzyme in complex with dimethylglycine and folinic acid. The alpha subunit is composed of two domains, contains NAD(+), and binds folinic acid. The beta subunit contains dimethylglycine, FAD, and FMN, and these flavins are approximately 10A apart. The gamma subunit is in contact with two domains of alpha subunit and has possibly a folate-binding structure. The delta subunit contains a single atom of zinc and has a Cys(3)His zinc finger structure. Based on the structures determined and on the previous works, the structure-function relationship on the heterotetrameric sarcosine oxidase is discussed.


Subject(s)
Corynebacterium/enzymology , Leucovorin/chemistry , Models, Chemical , Models, Molecular , Oxidoreductases, N-Demethylating/chemistry , Sarcosine/analogs & derivatives , Binding Sites , Computer Simulation , Crystallography , Dimerization , Enzyme Activation , Leucovorin/analysis , Multiprotein Complexes/analysis , Multiprotein Complexes/chemistry , Multiprotein Complexes/ultrastructure , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/ultrastructure , Protein Binding , Protein Conformation , Protein Structure, Tertiary , Sarcosine/analysis , Sarcosine/chemistry , Sarcosine Oxidase , Structure-Activity Relationship
12.
Arch Toxicol ; 78(3): 131-8, 2004 Mar.
Article in English | MEDLINE | ID: mdl-14600803

ABSTRACT

Drug biotransformation and its therapeutic effect may be modified during ageing. Among different causative factors of ageing, the impairment of normal cellular functions by free radicals has been evoked as playing a critical role. The effect of age on the expression and activity of CYP2E1 and CYP3A was investigated in male Wistar rats of 3, 8, 11 and 18 months old. The total cytochrome P450 as well as the expression and the activity (midazolam oxidation) of CYP3A isoforms did not change until 18 months of age. Chlorzoxazone hydroxylation (CYP2E1 activity) increased from 3 to 8 months, remained constant between 8 and 11 months and then progressively decreased until 18 months. Interestingly, CYP2E1 microsomal protein followed the same enzyme activity profile from 3 to 8 months, but remained constant thereafter. The level of CYP2E1 mRNA did not change over the whole period. While the amount of proteins did not change after 8 months, their functionality may be affected by oxidative stress (increase in thiobarbituric acid reactive substances, decrease in reduced glutathione level). However, no changes in carbonyl protein content were observed. The decrease in CYP2E1 activity in rats after 11 months is most probably due to post-translational modifications of CYP2E1 proteins. Indeed, it may be correlated with an accumulation of oxidative damage. Since no change was observed in CYP3A activity or in their protein and mRNA content, it seems that such isoforms should be less affected by oxidative stress.


Subject(s)
Aging/metabolism , Aryl Hydrocarbon Hydroxylases/metabolism , Cytochrome P-450 CYP2E1/metabolism , Gene Expression Regulation, Enzymologic , Liver/enzymology , Oxidoreductases, N-Demethylating/metabolism , RNA, Messenger/metabolism , Age Factors , Animals , Aryl Hydrocarbon Hydroxylases/analysis , Aryl Hydrocarbon Hydroxylases/genetics , Blotting, Western , Chlorzoxazone/metabolism , Cytochrome P-450 CYP2E1/analysis , Cytochrome P-450 CYP2E1/genetics , Cytochrome P-450 CYP3A , Cytosol/enzymology , Isoenzymes/metabolism , Lipid Peroxidation , Male , Microsomes, Liver/enzymology , Midazolam/metabolism , Oxidative Stress , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/genetics , Proteasome Endopeptidase Complex/analysis , Proteasome Endopeptidase Complex/metabolism , RNA, Messenger/analysis , Rats , Rats, Wistar , Reverse Transcriptase Polymerase Chain Reaction
13.
Crit Care Med ; 31(5): 1338-46, 2003 May.
Article in English | MEDLINE | ID: mdl-12771600

ABSTRACT

OBJECTIVE: To evaluate the relationship between the acute inflammatory response after surgical trauma and changes in hepatic cytochrome P450 3A4 activity, compare changes in cytochrome P450 3A4 activity after procedures with varying degrees of surgical stress, and to explore the time course of any potential drug-cytokine interaction after surgery. DESIGN: Prospective, open-label study with each patient serving as his or her own control. SETTING: University-affiliated, acute care, general hospital. PATIENTS: A total of 16 patients scheduled for elective repair of an abdominal aortic aneurysm (n = 5), complete or partial colectomy (n = 6), or peripheral vascular surgery with graft (n = 5). INTERVENTIONS: Cytochrome P450 3A4 activity was estimated using the carbon-14 [14C]erythromycin breath test (ERMBT) before surgery and 24, 48, and 72 hrs after surgery. Abdominal aortic aneurysm and colectomy patients also had an ERMBT performed at discharge. Blood samples were obtained before surgery, immediately after surgery, and 6, 24, 32, 48, and 72 hrs after surgery for determination of plasma concentrations of interleukin-6, interleukin-1beta, and tumor necrosis factor-alpha. Clinical markers of surgical stress that were collected included duration of surgery, estimated blood loss, and volume of fluids administered in the operating room. MEASUREMENTS AND MAIN RESULTS: ERMBT results significantly declined in all three surgical groups, with the lowest value at the time of the 72-hr study in all three groups. There was a trend toward differences in ERMBT results among groups that did not reach statistical significance (p =.06). The nadir ERMBT result was significantly and negatively correlated with both peak interleukin-6 concentration (r(s) = -.541, p =.03) and log interleukin-6 area under the curve from 0 to 72 hrs (r(s) = -.597, p =.014). Subjects with a peak interleukin-6 of >100 pg/mL had a significantly lower nadir ERMBT compared with subjects with a peak interleukin-6 of <100 pg/mL (35.5% +/- 5.2% vs. 74.7% +/- 5.1%, p <.001). CONCLUSIONS: Acute inflammation after elective surgery was associated with a significant decline in cytochrome P450 3A4 activity, which is predictive of clinically important changes in the metabolism of commonly used drugs that are substrates for this enzyme.


Subject(s)
Aryl Hydrocarbon Hydroxylases/analysis , Liver/enzymology , Oxidoreductases, N-Demethylating/analysis , Stress, Physiological/etiology , Stress, Physiological/metabolism , Surgical Procedures, Operative/adverse effects , Acute Disease , Aged , Aortic Aneurysm, Abdominal/surgery , Aryl Hydrocarbon Hydroxylases/drug effects , Blood Loss, Surgical/statistics & numerical data , Body Height , Body Weight , Breath Tests , Colectomy/adverse effects , Cytochrome P-450 CYP3A , Female , Fluid Therapy/statistics & numerical data , Humans , Inflammation , Interleukin-1/blood , Interleukin-6/blood , Linear Models , Male , Middle Aged , Oxidoreductases, N-Demethylating/drug effects , Peripheral Vascular Diseases/surgery , Predictive Value of Tests , Prospective Studies , Time Factors , Tumor Necrosis Factor-alpha/metabolism
14.
Biochim Biophys Acta ; 1588(2): 139-48, 2002 Nov 20.
Article in English | MEDLINE | ID: mdl-12385778

ABSTRACT

The aim of this study was to explore the regulation of serum cholic acid (CA)/chenodeoxycholic acid (CDCA) ratio in cholestatic hamster induced by ligation of the common bile duct for 48 h. The serum concentration of total bile acids and CA/CDCA ratio were significantly elevated, and the serum proportion of unconjugated bile acids to total bile acids was reduced in the cholestatic hamster similar to that in patients with obstructive jaundice. The hepatic CA/CDCA ratio increased from 3.6 to 11.0 (P<0.05) along with a 2.9-fold elevation in CA concentration (P<0.05) while the CDCA level remained unchanged. The hepatic mRNA and protein level as well as microsomal activity of the cholesterol 7alpha-hydroxylase, 7alpha-hydroxy-4-cholesten-3-one 12alpha-hydroxylase and 5beta-cholestane-3alpha,7alpha,12alpha-triol 25-hydroxylase were not significantly affected in cholestatic hamsters. In contrast, the mitochondrial activity and enzyme mass of the sterol 27-hydroxylase were significantly reduced, while its mRNA levels remained normal in bile duct-ligated hamster. In conclusion, bile acid biosynthetic pathway via mitochondrial sterol 27-hydroxylase was preferentially inhibited in bile duct-ligated hamsters. The suppression of CYP27A1 is, at least in part, responsible for the relative decreased production of CDCA and increased CA/CDCA ratio in the liver, bile and serum of cholestatic hamsters.


Subject(s)
Chenodeoxycholic Acid/biosynthesis , Cholestasis/metabolism , Liver/metabolism , Steroid Hydroxylases/antagonists & inhibitors , Animals , Aryl Hydrocarbon Hydroxylases/analysis , Bile/metabolism , Chenodeoxycholic Acid/analysis , Cholestanetriol 26-Monooxygenase , Cholestasis/blood , Cholestasis/enzymology , Cholesterol/metabolism , Cholesterol 7-alpha-Hydroxylase/analysis , Cholesterol 7-alpha-Hydroxylase/genetics , Cricetinae , Cytochrome P-450 CYP3A , Disease Models, Animal , Down-Regulation , Microsomes, Liver/metabolism , Models, Chemical , Oxidoreductases, N-Demethylating/analysis , RNA, Messenger/analysis , Steroid 12-alpha-Hydroxylase/analysis , Steroid Hydroxylases/genetics
15.
J Pharmacol Exp Ther ; 301(3): 945-52, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12023523

ABSTRACT

Tamoxifen is primarily used in the treatment of breast cancer. It has been approved as a chemopreventive agent for individuals at high risk for this disease. Tamoxifen is metabolized to a number of different products by cytochrome P450 enzymes. The effect of tamoxifen on the enzymatic activity of bacterially expressed human cytochrome CYP2B6 in a reconstituted system has been investigated. The 7-ethoxy-4-(trifluoromethyl)coumarin O-deethylation activity of purified CYP2B6 was inactivated by tamoxifen in a time- and concentration-dependent manner. Enzymatic activity was lost only in samples that were incubated with both tamoxifen and NADPH. The inactivation was characterized by a K(I) of 0.9 microM, a k(inact) of 0.02 min(-1), and a t(1/2) of 34 min. The loss in the 7-ethoxy-4-(trifluoromethyl)coumarin O-deethylation activity did not result in a similar percentage loss in the reduced carbon monoxide spectrum, suggesting that the heme moiety was not the major site of modification. The activity of CYP2B6 was not recovered after removal of free tamoxifen using spin column gel filtration. The loss in activity seemed to be due to a modification of the CYP2B6 and not reductase because adding fresh reductase back to the inactivated samples did not restore enzymatic activity. A reconstituted system containing purified CYP2B6, NADPH-reductase, and NADPH-generating system was found to catalyze tamoxifen metabolism to 4-OH-tamoxifen, 4'-OH-tamoxifen, and N-desmethyl-tamoxifen as analyzed by high-performance liquid chromatography analysis. Preliminary studies showed that tamoxifen had no effect on the activities of CYP1B1 and CYP3A4, whereas CYP2D6 and CYP2C9 exhibited a 25% loss in enzymatic activity.


Subject(s)
Antineoplastic Agents, Hormonal/pharmacology , Aryl Hydrocarbon Hydroxylases , Benzylisoquinolines , Cytochrome P-450 Enzyme System/metabolism , Oxidoreductases, N-Demethylating/metabolism , Tamoxifen/pharmacology , Alkaloids , Antineoplastic Agents, Hormonal/chemistry , Coumarins/antagonists & inhibitors , Coumarins/metabolism , Cytochrome P-450 CYP2B6 , Cytochrome P-450 Enzyme Inhibitors , Cytochrome P-450 Enzyme System/analysis , Dose-Response Relationship, Drug , Enzyme Activation/drug effects , Enzyme Activation/physiology , Enzyme Inhibitors/pharmacology , Escherichia coli/drug effects , Escherichia coli/enzymology , Heme/metabolism , Humans , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/antagonists & inhibitors , Substrate Specificity/drug effects , Substrate Specificity/physiology
16.
Toxicol Pathol ; 30(2): 247-53, 2002.
Article in English | MEDLINE | ID: mdl-11950168

ABSTRACT

We investigated the cellular expression of 9 cytochrome P450-isozymes (CYP1A1, CYPIA2, CYP2B6, CYP2C8,9,19, CYP2D1, CYP2E1, CYP3A1, CYP3A2, CYP3A4) and 3 glutathione S-transferase-isozymes (GST-pi, GST-alpha. GST-mu) in the pancreas of hamsters, mice, rats, rabbits, pigs, dogs and monkeys, and in comparison with the human pancreas. A wide variation was found in the cellular localization of these enzymes between the 8 species. Most enzymes were expressed in the pancreas of the hamster, mouse, monkey and human, whereas rats, pigs, rabbits and dogs were lacking several isozymes. However, in all of the species the islet cells expressed more enzymes than ductal and acinar cells. An exclusive expression of enzymes in the islet cells was found in the hamster (CYP2E1). mouse (CYP1A1 , CYP1A2, GST-alpha, GST-mu), rat (CYP2C8,9, 19). rabbit (CYP1A2, CYP2B6, GST-pi), and pig (CYP1AI). Although no polymorphism was found in the pancreas of animals, in human tissue four enzymes were missing in about 50% of the cases. The results imply a greater importance of the islet cells in the metabolism of xenobiotics within the pancreas. The differences in the distribution of these drug-metabolizing enzymes in the pancreas between the species call for caution when extrapolating experimental results to humans.


Subject(s)
Aryl Hydrocarbon Hydroxylases , Cytochrome P-450 Enzyme System/analysis , Glutathione Transferase/analysis , Isoenzymes/metabolism , Pancreas/enzymology , Adolescent , Adult , Aged , Aged, 80 and over , Animals , Child , Child, Preschool , Cytochrome P-450 CYP1A1/analysis , Cytochrome P-450 CYP1A2/analysis , Cytochrome P-450 CYP2B6 , Female , Humans , Immunohistochemistry , Infant , Male , Middle Aged , Oxidoreductases, N-Demethylating/analysis , Species Specificity
17.
Biochem Biophys Res Commun ; 291(4): 1031-7, 2002 Mar 08.
Article in English | MEDLINE | ID: mdl-11866469

ABSTRACT

Development of hepatocellular carcinoma (HCC) is a complex process involving multiple changes in gene expression and usually occurs in the presence of liver cirrhosis. In this research, we observed proteome alterations of three tissue types isolated from livers of HCC patients: normal, cirrhotic, and tumorous tissue. Proteome alterations were observed using two-dimensional polyacrylamide gel electrophoresis and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Comparing the tissue types with each other, a significant change in expression level was found in 21 proteins. Of these proteins, sarcosine dehydrogenase, liver carboxylesterase, peptidyl-prolyl isomerase A, and lamin B1 are considered novel HCC marker candidates. In particular, lamin B1 may be considered as a marker for cirrhosis, because its expression level changes considerably in cirrhotic tissue compared with normal tissue. The proteins revealed in this experiment can be used in the future for studies pertaining to hepatocarcinogenesis, or as diagnostic markers and therapeutic targets for HCC.


Subject(s)
Carcinoma, Hepatocellular/metabolism , Lamin Type B , Liver Neoplasms/metabolism , Neoplasm Proteins/analysis , Proteome/analysis , Biomarkers, Tumor/analysis , Carboxylic Ester Hydrolases/analysis , Cyclophilin A/analysis , Down-Regulation , Electrophoresis, Gel, Two-Dimensional , Humans , Lamins , Liver/metabolism , Liver Cirrhosis/metabolism , Neoplasm Proteins/metabolism , Nuclear Proteins/analysis , Oxidoreductases, N-Demethylating/analysis , Proteome/metabolism , Sarcosine Dehydrogenase , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Up-Regulation
18.
Clin Pharmacol Ther ; 70(5): 446-54, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11719731

ABSTRACT

BACKGROUND: Interindividual variation in the pharmacokinetics of the immunosuppressive agents cyclosporine (INN, ciclosporin) and tacrolimus may result from differences in the activity of cytochrome P4503A (CYP3A). The erythromycin breath test is an in vivo assay of hepatic CYP3A activity, but the method has never been directly validated. The aim of the study was to investigate whether an early postoperative erythromycin breath test correlated with the hepatic CYP3A protein level and catalytic activity in liver transplant recipients. METHODS: In 18 liver transplant recipients, the erythromycin breath test was performed within 2 hours after transplantation. A graft biopsy was obtained during surgery and analyzed for the CYP3A protein level by Western blotting and for CYP3A activity with erythromycin demethylation and testosterone 6beta- hydroxylation assays. RESULTS: The erythromycin breath test values ranged from 0.14% to 1.65% of carbon 14 per hour, and the CYP3A protein level ranged from 732 to 7822 as measured by optical density. The in vitro catalytic activity determined by the erythromycin demethylation assay ranged from 94 to 902 disintegrations per minute per 5 minutes per milligram of protein, and the activity determined by testosterone 6beta-hydroxylation ranged from 0.030 to 0.627 nmol per minute per milligram of protein. Significant correlation was demonstrated between the erythromycin breath test and both the erythromycin demethylation (Spearman correlation coefficient: R = 0.76, R (2) = 0.57; P =.0004) and the testosterone 6beta-hydroxylation (Spearman correlation coefficient: R = 0.79, R (2) = 0.63; P =.0001) assays. The erythromycin breath test also correlated with the CYP3A protein level (Spearman correlation coefficient: R = 0.60, R (2) = 0.36; P =.01). CONCLUSION: Our data support the erythromycin breath test as a specific in vivo assay of CYP3A activity in humans. The test is applicable in liver transplant recipients in the early postoperative phase. Future studies should evaluate the clinical usefulness of an early postoperative erythromycin breath test as a predictor of cyclosporine-tacrolimus pharmacokinetics in liver transplantation.


Subject(s)
Anti-Bacterial Agents/pharmacokinetics , Aryl Hydrocarbon Hydroxylases , Breath Tests , Cytochrome P-450 Enzyme System/metabolism , Erythromycin/pharmacokinetics , Liver Transplantation , Liver/enzymology , Oxidoreductases, N-Demethylating/metabolism , Adolescent , Adult , Aged , Cytochrome P-450 CYP3A , Cytochrome P-450 Enzyme System/analysis , Female , Humans , Male , Middle Aged , Oxidoreductases, N-Demethylating/analysis
19.
Biol Neonate ; 80(3): 193-201, 2001.
Article in English | MEDLINE | ID: mdl-11585982

ABSTRACT

CYP3A is the major cytochrome P450 subfamily constitutively expressed in the human liver. CYP3A4 is the predominant hepatic P450 form in adults and it is expressed at high but very variable levels among individuals. The fetal liver contains mainly CYP3A7, while the presence of the other CYP3A enzymes in fetal liver has remained controversial. In this study, the relative levels of CYP3A4, CYP3A5 and CYP3A7 expression were determined in a panel of 9-11 fetal livers with a similar gestation age (9-12 weeks) and compared to adult livers. CYP3A7 was found to be the major CYP3A form in all the fetal liver samples. The abundance of CYP3A7 varied more at the mRNA (77-fold variation) than at the protein level (4.8-fold variation). CYP3A5 mRNA was also detected in all of the fetal liver samples, but the average level was 700-fold lower than that of CYP3A7. CYP3A5 protein was detected by immunoblot analysis in only 1 fetal liver out of the 9 investigated, the level of expression being moderately high in this sample. CYP3A4 mRNA was detected in only a subset of the fetal liver samples and its level was the lowest of the CYP3A forms. This is the first study to demonstrate the polymorphic expression of CYP3A5 and the variability of CYP3A7 expression in fetal liver and suggests that significant interindividual differences in the metabolism of xenobiotics may already exist at the prenatal stage. These differences may contribute to individual pharmacological and/or toxicological responses in the fetus.


Subject(s)
Aryl Hydrocarbon Hydroxylases , Cytochrome P-450 Enzyme System/analysis , Cytochrome P-450 Enzyme System/genetics , Gene Expression , Liver/embryology , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/genetics , Cloning, Molecular , Cytochrome P-450 CYP3A , Gestational Age , Humans , Immunoblotting , Isoenzymes/analysis , Isoenzymes/genetics , Liver/enzymology , Mixed Function Oxygenases/analysis , Mixed Function Oxygenases/genetics , Polymerase Chain Reaction , RNA, Messenger/analysis , Reverse Transcriptase Polymerase Chain Reaction
20.
Toxicol Appl Pharmacol ; 173(3): 129-36, 2001 Jun 15.
Article in English | MEDLINE | ID: mdl-11437634

ABSTRACT

This study was designed to elucidate the mechanism of retinol's potentiation of acetaminophen-induced hepatotoxicity. To accomplish this, the major bioactivation and detoxification pathways for acetaminophen were investigated following retinol (75 mg/kg/day, 4 days), acetaminophen (400 mg/kg), and retinol + acetaminophen treatment. Hepatic microsomes were used to determine the catalytic activity and polypeptide levels of cytochrome P450 enzymes involved in the murine metabolism of acetaminophen. Results showed that the catalytic activity and polypeptide levels of CYP1A2, CYP2E1, and CYP3A were unchanged in the treatment groups compared to vehicle and untreated controls. In combination, retinol + acetaminophen caused a significantly greater depletion of GSH compared to corn oil + acetaminophen (0.36 +/- 0.11 vs 0.89 +/- 0.19 micromol/g, respectively, p < 0.05). This greater GSH depletion correlated with a higher degree of hepatic injury in the retinol + acetaminophen-treated animals but is probably not the cause of the potentiated injury since the results showed that retinol treatment itself did not alter hepatic glutathione (3.34 +/- 0.43 vs 3.44 +/- 0.46 micromol/g for retinol vs vehicle, respectively). However, hepatic UDPGA stores were decreased in the retinol-treated group compared to untreated and corn oil controls (54.6 +/- 10.6 vs 200.6 +/- 17.6 nmol/g for retinol and untreated control, respectively, p < 0.001). This demonstrates that there is significantly less hepatic UDPGA available for conjugation following retinol administration. The results suggest that decreased hepatic UDPGA is likely the cause of retinol's potentiation of acetaminophen-induced hepatic injury.


Subject(s)
Acetaminophen/toxicity , Aryl Hydrocarbon Hydroxylases , Chemical and Drug Induced Liver Injury , Vitamin A/toxicity , Acetaminophen/administration & dosage , Animals , Blotting, Western , Catalysis , Cytochrome P-450 CYP1A2/analysis , Cytochrome P-450 CYP1A2/metabolism , Cytochrome P-450 CYP2E1/analysis , Cytochrome P-450 CYP2E1/metabolism , Cytochrome P-450 CYP3A , Cytochrome P-450 Enzyme System/analysis , Cytochrome P-450 Enzyme System/metabolism , Drug Synergism , Glutathione/analysis , Glutathione/metabolism , Liver/chemistry , Male , Mice , Mice, Inbred BALB C , Microsomes, Liver/enzymology , Oxidoreductases, N-Demethylating/analysis , Oxidoreductases, N-Demethylating/metabolism , Uridine Diphosphate Glucuronic Acid/analysis , Vitamin A/administration & dosage
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