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1.
J Hazard Mater ; 468: 133485, 2024 Apr 15.
Article in English | MEDLINE | ID: mdl-38377898

ABSTRACT

Biodegradation is an efficient and cost-effective approach to remove residual penicillin G sodium (PGNa) from the environment. In this study, the effective PGNa-degrading strain SQW1 (Sphingobacterium sp.) was screened from contaminated soil using enrichment technique. The effects of critical operational parameters on PGNa degradation by strain SQW1 were systematically investigated, and these parameters were optimized by response surface methodology to maximize PGNa degradation. Comparative experiments found the extracellular enzyme to completely degrade PGNa within 60 min. Combined with whole genome sequencing of strain SQW1 and LC-MS analysis of degradation products, penicillin acylase and ß-lactamase were identified as critical enzymes for PGNa biodegradation. Moreover, three degradation pathways were postulated, including ß-lactam hydrolysis, penicillin acylase hydrolysis, decarboxylation, desulfurization, demethylation, oxidative dehydrogenation, hydroxyl reduction, and demethylation reactions. The toxicity of PGNa biodegradation intermediates was assessed using paper diffusion method, ECOSAR, and TEST software, which showed that the biodegradation products had low toxicity. This study is the first to describe PGNa-degrading bacteria and detailed degradation mechanisms, which will provide new insights into the PGNa biodegradation.


Subject(s)
Penicillin Amidase , Sphingobacterium , Sphingobacterium/genetics , Sphingobacterium/metabolism , Penicillin Amidase/metabolism , Penicillin G , Biodegradation, Environmental
2.
PLoS One ; 19(1): e0297149, 2024.
Article in English | MEDLINE | ID: mdl-38241311

ABSTRACT

With the emergence of penicillin resistance, the development of novel antibiotics has become an urgent necessity. Semi-synthetic penicillin has emerged as a promising alternative to traditional penicillin. The demand for the crucial intermediate, 6-aminopicillanic acid (6-APA), is on the rise. Enzyme catalysis is the primary method employed for its production. However, due to certain limitations, the strategy of enzyme immobilization has also gained prominence. The magnetic Ni0.4Cu0.5Zn0.1Fe2O4 nanoparticles were successfully prepared by a rapid-combustion method. Sodium silicate was used to modify the surface of the Ni0.4Cu0.5Zn0.1Fe2O4 nanoparticles to obtain silica-coated nanoparticles (Ni0.4Cu0.5Zn0.1Fe2O4-SiO2). Subsequently, in order to better crosslink PGA, the nanoparticles were modified again with glutaraldehyde to obtain glutaraldehyde crosslinked Ni0.4Cu0.5Zn0.1Fe2O4-SiO2-GA nanoparticles which could immobilize the PGA. The structure of the PGA protein was analyzed by the PyMol program and the immobilization strategy was determined. The conditions of PGA immobilization were investigated, including immobilization time and PGA concentration. Finally, the enzymological properties of the immobilized and free PGA were compared. The optimum catalytic pH of immobilized and free PGA was 8.0, and the optimum catalytic temperature of immobilized PGA was 50°C, 5°C higher than that of free PGA. Immobilized PGA in a certain pH and temperature range showed better catalytic stability. Vmax and Km of immobilized PGA were 0.3727 µmol·min-1 and 0.0436 mol·L-1, and the corresponding free PGA were 0.7325 µmol·min-1 and 0.0227 mol·L-1. After five cycles, the immobilized enzyme activity was still higher than 25%.


Subject(s)
Nanoparticles , Penicillin Amidase , Penicillin Amidase/chemistry , Penicillin Amidase/metabolism , Glutaral/chemistry , Silicon Dioxide/chemistry , Enzymes, Immobilized/chemistry , Catalysis , Nanoparticles/chemistry , Penicillins , Magnetic Phenomena , Hydrogen-Ion Concentration , Temperature , Enzyme Stability
3.
Protein Expr Purif ; 210: 106327, 2023 10.
Article in English | MEDLINE | ID: mdl-37348663

ABSTRACT

Penicillin G acylase (PGA) is a strategic enzyme in the production processes of beta-lactam antibiotics. High demand for ß-lactam semisynthetic antibiotics explain the genetic and biochemical engineering strategies devoted towards novel ways for PGA production and application. This work presents a fermentation process for the heterologous production of PGA from Alcaligenes faecalis in Bacillus megaterium with optimization. The thermal stability from A. faecalis PGA is considerably higher than other described PGA and the recombinant enzyme is secreted to the culture medium by B. megaterium, which facilitates the separation and purification steps. Media optimization using fractional factorial design experiments was used to identify factors related to PGA activity detection in supernatant and cell lysates. The optimized medium resulted in almost 6-fold increased activity in the supernatant samples when compared with the basal medium. Maximum enzyme activity in optimized medium composition achieves values between 135 and 140 IU/ml. The results suggest a promising model for recombinant production of PGA in B. megaterium with possible extracellular expression of the active enzyme.


Subject(s)
Alcaligenes faecalis , Bacillus megaterium , Penicillin Amidase , Alcaligenes faecalis/genetics , Alcaligenes faecalis/metabolism , Penicillin Amidase/genetics , Penicillin Amidase/metabolism , Anti-Bacterial Agents , beta-Lactams
4.
Bioorg Chem ; 136: 106533, 2023 07.
Article in English | MEDLINE | ID: mdl-37084587

ABSTRACT

Penicillin G acylase (PGA) is a key biocatalyst for the enzymatic production of ß-lactam antibiotics, which can not only catalyze the synthesis of ß-lactam antibiotics but also catalyze the hydrolysis of the products to prepare semi-synthetic antibiotic intermediates. However, the high hydrolysis and low synthesis activities of natural PGAs severely hinder their industrial application. In this study, a combinatorial directed evolution strategy was employed to obtain new PGAs with outstanding performances. The best mutant ßF24G/ßW154G was obtained from the PGA of Achromobacter sp., which exhibited approximately a 129.62-fold and a 52.55-fold increase in specific activity and synthesis/hydrolysis ratio, respectively, compared to the wild-type AsPGA. Thereafter, this mutant was used to synthesize amoxicillin, cefadroxil, and ampicillin; all conversions > 99% were accomplished in 90-135 min with almost no secondary hydrolysis byproducts produced in the reaction. Molecular dynamics simulation and substrate pocket calculation revealed that substitution of the smallest glycine residue at ßF24 and ßW154 expanded the binding pocket, thereby facilitating the entry and release of substrates and products. Therefore, this novel mutant is a promising catalyst for the large-scale production of ß-lactam antibiotics.


Subject(s)
Achromobacter , Penicillin Amidase , Penicillin Amidase/metabolism , Achromobacter/metabolism , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/metabolism , Ampicillin/metabolism , Amoxicillin/metabolism , Monobactams
5.
J Chromatogr A ; 1678: 463365, 2022 Aug 16.
Article in English | MEDLINE | ID: mdl-35907366

ABSTRACT

Penicillin G acylase (PGA), as a key enzyme, is increasingly used in the commercial production of semi-synthetic ß-lactam antibiotics (SSBAs). With the substitution of conventional chemical synthesis by emerging bioconversion processes, more and more PGAs fermented from different types of strains such as Escherichia coli (E. coli, ATCC 11105), Achromobacter sp. CCM 4824 and Providencia rettgeri (ATCC 31052) have been used in this kind of enzymatic processes. As an intermediate reaction catalyst, PGA protein and its presence in the final products may cause a potential risk of human allergic reaction and bring challenges for both quality and process controls. To achieve qualitative and quantitative analysis of PGAs and their residues in SSBAs, a tryptic digestion coupled with liquid chromatography - tandem mass spectrometry (LC-MS/MS) method was developed and proposed because of advantages like high selectivity and sensitivity. A suitable filter aided sample preparation (FASP) method was also used to remove matrix interference and to enrich the target PGA retained in the ultrafiltration membrane for an efficient enzymatic hydrolysis and subsequent accurate MS detection. Finally, twelve batches of PGAs from eight companies were identified and categorized into two types of strains (E. coli and Achromobacter sp. CCM 4824) using proteomic analysis. In total nine batches of five types of SSBAs (amoxicillin, cephalexin, cefprozil, cefdinir and cefaclor) from eight manufacturers were selected for investigation. Trace levels of PGA residual proteins ranging from 0.01 to 0.44 ppm were detected in six batches of different SSBAs which were far lower than the safety limit of 35 ppm reported by DSM, a manufacturer with expertise in the production of SSBAs by enzymatic processes. The developed FASP with LC-MS/MS method is superior to traditional protein assays in terms of selectivity, sensitivity and accuracy. Moreover, it could provide in-depth analysis of amino acid sequences and signature peptides contributing to assignment of the strain sources of PGAs. This method could become a promising and powerful tool to monitor enzymatic process robustness and reliability of this kind of SSBAs manufacturing.


Subject(s)
Penicillin Amidase , Humans , Anti-Bacterial Agents/metabolism , Chromatography, Liquid , Escherichia coli/metabolism , Penicillin Amidase/chemistry , Penicillin Amidase/metabolism , Proteomics , Reproducibility of Results , Tandem Mass Spectrometry
6.
Chem Commun (Camb) ; 58(19): 3166-3169, 2022 Mar 03.
Article in English | MEDLINE | ID: mdl-35170593

ABSTRACT

This article reports the synthesis and characterization of a novel self-immolative linker, based on thiocarbonates, which releases a free thiol upon activation via enzymes. We demonstrate that thiocarbonate self-immolative linkers can be used to detect the enzymes penicillin G amidase (PGA) and nitroreductase (NTR) with high sensitivity using absorption spectroscopy. Paired with modern thiol amplification technology, the detection of PGA and NTR were achieved at concentrations of 160 nM and 52 nM respectively. In addition, the PGA probe was shown to be compatible with both biological thiols and enzymes present in cell lysates.


Subject(s)
Nitroreductases/analysis , Penicillin Amidase/analysis , Sulfhydryl Compounds/chemistry , Molecular Structure , Nitroreductases/metabolism , Penicillin Amidase/metabolism , Spectrometry, Fluorescence
7.
Biotechnol Lett ; 43(7): 1467-1473, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33891232

ABSTRACT

OBJECTIVE: To change the specificity of a glutaryl-7-aminocephalosporanic acid acylase (GCA) towards N-acyl homoserine lactones (AHLs; quorum sensing signalling molecules) by site-directed mutagenesis. RESULTS: Seven residues were identified by analysis of existing crystal structures as potential determinants of substrate specificity. Site-saturation mutagenesis libraries were created for each of the seven selected positions. High-throughput activity screening of each library identified two variants-Arg255Ala, Arg255Gly-with new activities towards N-acyl homoserine lactone substrates. Structural modelling of the Arg255Gly mutation suggests that the smaller side-chain of glycine (as compared to arginine in the wild-type enzyme) avoids a key clash with the acyl group of the N-acyl homoserine lactone substrate. CONCLUSIONS: Mutation of a single amino acid residue successfully converted a GCA (with no detectable activity against AHLs) into an AHL acylase. This approach may be useful for further engineering of 'quorum quenching' enzymes.


Subject(s)
Acyl-Butyrolactones/metabolism , Penicillin Amidase/metabolism , Point Mutation , Pseudomonas aeruginosa/growth & development , Arginine/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biofilms/growth & development , Crystallography, X-Ray , Gene Expression Regulation, Bacterial , Models, Molecular , Molecular Docking Simulation , Mutagenesis, Site-Directed , Penicillin Amidase/chemistry , Penicillin Amidase/genetics , Protein Conformation , Pseudomonas aeruginosa/enzymology , Pseudomonas aeruginosa/genetics , Quorum Sensing , Substrate Specificity
8.
Int J Biol Macromol ; 175: 322-329, 2021 Apr 01.
Article in English | MEDLINE | ID: mdl-33549660

ABSTRACT

Penicillin G acylase (PGA) was an important biocatalyst for enzymatic production of second-generation cephalosporin. PGA from Achromobacter xylosoxidans PX02 (AxPGA) showed relatively lower identity to EcPGA (54.9% in α subunit and 51.7% in ß subunit), which could synthesize cefamandole in the kinetically controlled N-acylation (kcNa). Semi-rational design of AxPGA and "small and smart" mutant libraries were developed with minimal screening to improve cefamandole production. A triple mutant αR141A/αF142I/ßF24G by combining the mutational sites (ßF24, αR141, and αF142) from different subunits of AxPGA showed better performance in cefamandole production, with 4.2-fold of improvement in the (kcat/Km)AD value for activated acyl donor (R)-Methyl mandelate. Meanwhile, the (kcat/Km)Ps value for cefamandole by mutant αR141A/αF142I/ßF24G was sharply dropped by 25.5 times, indicating its highly synthetic activity and extremely low hydrolysis of cefamandole. Strikingly, the triple mutant αR141A/αF142I/ßF24G could form cefamandole with a yield of 85% at an economical substrate ratio (acyl donor/nucleophile) of 1.3:1 (82% at 1.1:1), which advanced the greener and more sustainable process of cefamandole production than the wild type. Furtherly, the improved synthetic ability and lower hydrolysis of cefamandole by mutant were rationalized using molecular docking.


Subject(s)
Cefamandole/chemical synthesis , Penicillin Amidase/chemistry , Penicillin Amidase/genetics , Achromobacter denitrificans/genetics , Achromobacter denitrificans/metabolism , Catalysis , Cefamandole/metabolism , Hydrolysis , Kinetics , Molecular Docking Simulation , Mutagenesis, Site-Directed/methods , Penicillin Amidase/metabolism , Protein Engineering/methods , beta-Lactams/chemistry
9.
Int Microbiol ; 24(1): 37-45, 2021 Jan.
Article in English | MEDLINE | ID: mdl-32705496

ABSTRACT

Penicillin acylases (penicillin amidohydrolase, EC 3.5.1.11) are a group of enzymes with many applications within the pharmaceutical industry, and one of them is the production of semi-synthetic beta-lactam antibiotics. This enzyme is mainly produced by bacteria but also by some fungi. In the present study, the filamentous fungus Mucor griseocyanus was used to produce penicillin acylase enzyme (PGA). Its ability to express PGA enzyme in submerged fermentation process was assessed, finding that this fungal strain produces the biocatalyst of interest in an extracellular way at a level of 570 IU/L at 72 h of fermentation; in this case, a saline media using lactose as carbon source and penicillin G as inducer was employed. In addition, a DNA fragment (859 bp) of the pga from a pure Mucor griseocyanus strain was amplified, sequenced, and analyzed in silico. The partial sequence of pga identified in the fungi showed high identity percentage with penicillin G acylase sequences deposited in NCBI through BLAST, especially with the ß subunit of PGA from the Alcaligenes faecalis bacterium¸ which is a region involved in the catalytic function of this protein. Besides, the identification of domains in the penicillin G acylase sequence of Mucor griseocyanus showed three conserved regions of this protein. The bioinformatic results support the identity of the gen as penicillin G acylase. This is the first report that involves sequencing and in silico analysis of Mucor griseocyanus strain gene encoding PGA.


Subject(s)
Fungal Proteins/metabolism , Mucor/enzymology , Penicillin Amidase/genetics , Amino Acid Sequence , Base Sequence , Biocatalysis , Fermentation , Fungal Proteins/chemistry , Fungal Proteins/genetics , Mucor/classification , Mucor/genetics , Mucor/metabolism , Penicillin Amidase/chemistry , Penicillin Amidase/metabolism , Phylogeny , Protein Domains , Sequence Alignment
10.
Biotechnol Prog ; 37(1): e3063, 2021 01.
Article in English | MEDLINE | ID: mdl-32776709

ABSTRACT

During enzyme immobilization, enzyme activity and protein distribution are affected by various factors such as enzyme load, temperature, and pH. In general, two types of protein distribution patterns (heterogeneous or homogeneous) are observed inside a porous carrier, owing to differences in preparation parameters. During the immobilization of a fusion protein (CCApH) of cephalosporin C acylase (CCA) and pHluorin (a pH-sensitive mutant of green fluorescent protein), different shaking speeds induced obvious differences in protein distribution on an epoxy carrier, LX-1000EPC. Enzyme immobilization with a homogeneous distribution pattern was observed at a low shaking speed (120 rpm) with an operational stability of 10 batches at 37°C. The operational stability of an immobilisate with heterogeneous protein distribution prepared at a high shaking speed (200 rpm) was six batches. Given the pH-sensitive characteristics of pHluorin in the fusion protein, the intraparticle pH of CCApH immobilisates during catalysis was monitored using confocal laser scanning microscopy. The microenvironmental pH of the immobilisate with heterogeneous protein distribution sharply decreased by about 2 units; this decrease in the pH may be detrimental to the life-span of immobilized CCA. Thus, this work demonstrates the good operational stability of pH-sensitive proton-forming immobilized enzymes with homogeneous protein distribution.


Subject(s)
Enzymes, Immobilized/metabolism , Escherichia coli Proteins/metabolism , Escherichia coli/metabolism , Green Fluorescent Proteins/metabolism , Penicillin Amidase/metabolism , Recombinant Fusion Proteins/metabolism , Catalysis , Enzyme Stability , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/genetics , Escherichia coli/genetics , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/genetics , Green Fluorescent Proteins/chemistry , Green Fluorescent Proteins/genetics , Hydrogen-Ion Concentration , Kinetics , Penicillin Amidase/chemistry , Penicillin Amidase/genetics , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Temperature
11.
Appl Microbiol Biotechnol ; 104(13): 5787-5800, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32424437

ABSTRACT

To take full advantage of recombinant Pichia pastoris (Komagataella phaffii) as a production system for heterologous proteins, the complex protein secretory process should be understood and optimised by circumventing bottlenecks. Typically, little or no attention has been paid to the fate of newly synthesised protein inside the cell, or its passage through the secretory pathway, and only the secreted product is measured. However, the system's productivity (i.e. specific production rate qp), includes productivity of secreted (qp,extra) plus intracellularly accumulated (qp,intra) protein. In bioreactor cultivations with P. pastoris producing penicillin G acylase, we studied the dynamics of product formation, i.e. both the specific product secretion (qp,extra) and product retention (qp,intra) as functions of time, as well as the kinetics, i.e. productivity in relation to specific growth rate (µ). Within the time course, we distinguished (I) an initial phase with constant productivities, where the majority of product accumulated inside the cells, and qp,extra, which depended on µ in a bell-shaped manner; (II) a transition phase, in which intracellular product accumulation reached a maximum and productivities (intracellular, extracellular, overall) were changing; (III) a new phase with constant productivities, where secretion prevailed over intracellular accumulation, qp,extra was linearly related to µ and was up to three times higher than in initial phase (I), while qp,intra decreased 4-6-fold. We show that stress caused by heterologous protein production induces cellular imbalance leading to a secretory bottleneck that ultimately reaches equilibrium. This understanding may help to develop cultivation strategies for improving protein secretion from P. pastoris.Key Points• A novel concept for industrial bioprocess development.• A Relationship between biomass growth and product formation in P. pastoris.• A Three (3) phases of protein production/secretion controlled by the AOX1-promoter.• A Proof of concept in production of industrially relevant penicillin G acylase.


Subject(s)
Bacterial Proteins/metabolism , Penicillin Amidase/metabolism , Saccharomycetales/metabolism , Bacterial Proteins/genetics , Batch Cell Culture Techniques , Biomass , Bioreactors , Extracellular Space/metabolism , Intracellular Space/metabolism , Kinetics , Models, Theoretical , Penicillin Amidase/genetics , Promoter Regions, Genetic , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Saccharomycetales/genetics , Saccharomycetales/growth & development
12.
Chembiochem ; 21(15): 2143-2148, 2020 08 03.
Article in English | MEDLINE | ID: mdl-32189429

ABSTRACT

Penicillin G acylase (PGA) has been immobilized on a lanthanum-incorporated mesostructured cellular foam (La-MCF) support by using the interaction between the strong Lewis acid sites on the surface of La-MCF and the free amino groups of lysine residues of PGA. The La-MCF support was successfully synthesized in situ through the addition of a citric acid (CA) complexant. The results of pyridine-IR spectroscopy show the presence of strong Lewis acid sites on the surface of the prepared La-MCF (with CA), attributed to the incorporation of lanthanum species into the framework of MCF. Through interaction with the strong Lewis acid sites, the enzymes can be firmly immobilized on the surface of the support. The results indicate that PGA/La-MCF (with CA) exhibits a high specific activity and greatly enhanced operational stability. For the hydrolysis of penicillin G potassium salt, the initial specific activity of PGA/La-MCF (with CA) reaches 10023 U/g. Even after being recycled 10 times, PGA/La-MCF (with CA) retains 89 % of its initial specific activity, much higher than the 77 % of PGA/Si-MCF.


Subject(s)
Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Lanthanum/chemistry , Penicillin Amidase/chemistry , Penicillin Amidase/metabolism , Silicon Dioxide/chemistry , Lewis Acids/chemistry , Lewis Bases/chemistry , Porosity
13.
J Pharm Biomed Anal ; 185: 113229, 2020 Jun 05.
Article in English | MEDLINE | ID: mdl-32163852

ABSTRACT

There is a growing trend in the pharmaceutical industry towards substituting conventional chemical synthesis routes of semi-synthetic ß-lactam antibiotics (SSBAs) through environmentally sustainable enzymatic processes. These have advantages such as cost reduction in terms of solvent and waste treatment and time saving owing to fewer reaction steps. Penicillin G acylase (PGA) is an industrially important enzyme that is mainly used to catalyze the synthesis of SSBAs. In this study, we established an integrative strategy using three different analytical methods for determining the PGA-associated residual protein content, which is a critical quality issue in the end product. Cefaclor was taken as representative example of SSBAs. High-performance liquid chromatography coupled with fluorescence detection (HPLC-FD) allowed the routine analysis of PGA residual proteins and other low molecular weight (MW) impurities with high detection specificity and sensitivity, comparable to those of the Bradford assay and microfluidic protein chip electrophoresis. However, these latter two methods were superior for quantitative and qualitative analysis, respectively, and should be regarded as necessary adjuncts to the HPLC-FD method. By combining the three methods, trace levels of residual proteins were detected in four (out of 13) cefaclor bulk samples from two different manufacturers, with a major protein MW of ∼63 kDa. This suggests that the higher MW PGA subunit tends to persist in the end product. The integrative determination strategy described here can be used to evaluate SSBA bulk samples and monitor the process of SSBA manufacturing by enzymatic methods, especially in terms of inter-batch consistency and process stability.


Subject(s)
Anti-Bacterial Agents/analysis , Cefaclor/analysis , Penicillin Amidase/analysis , Quality Control , Technology, Pharmaceutical/methods , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/standards , Biocatalysis , Cefaclor/chemical synthesis , Cefaclor/standards , Chromatography, High Pressure Liquid , Enzymes, Immobilized/analysis , Enzymes, Immobilized/metabolism , Penicillin Amidase/metabolism , Technology, Pharmaceutical/standards
14.
Bioorg Chem ; 99: 103765, 2020 06.
Article in English | MEDLINE | ID: mdl-32213361

ABSTRACT

A penicillin G acylase (PGA) from Achromobacter xylosoxidans PX02 was newly isolated, and site-directed mutagenesis at three important positions αR141, αF142, ßF24 was carried out for improving the enzymatic synthesis of ß-lactam antibiotics. The efficient mutant ßF24A was selected, and the (Ps/Ph)ini (ratio between the initial rate of synthesis and hydrolysis of the activated acyl donor) dramatically increased from 1.42-1.50 to 23.8-24.1 by means of the optimization of reaction conditions. Interestingly, the efficient enzymatic synthesis of ampicillin (99.1% conversion) and amoxicillin (98.7% conversion) from a high concentration (600 mM) of substrate 6-APA in the low acyl donor/nucleus ratio (1.1:1) resulted in a large amount of products precipitation from aqueous reaction solution. Meanwhile, the by-product D-phenylglycine was hardly precipitated, and 93.5% yield of precipitated ampicillin (561 mM) and 94.6% yield of precipitated amoxicillin (568 mM) were achieved with high purity (99%), which significantly simplified the downstream purification. This was the first study to achieve efficient ß-lactam antibiotics synthesis process with in situ product removal, with barely any by-product formation. The effect enzymatic synthesis of antibiotics in aqueous reaction solution with in situ product removal provides a promising model for the industrial semi-synthesis of ß-lactam antibiotics.


Subject(s)
Achromobacter denitrificans/enzymology , Anti-Bacterial Agents/biosynthesis , Penicillin Amidase/metabolism , beta-Lactams/metabolism , Anti-Bacterial Agents/chemistry , Molecular Docking Simulation , Molecular Structure , Penicillin Amidase/genetics , Penicillin Amidase/isolation & purification , Solubility , beta-Lactams/chemistry
15.
Curr Pharm Biotechnol ; 21(4): 287-297, 2020.
Article in English | MEDLINE | ID: mdl-31713475

ABSTRACT

BACKGROUND: ß-lactam antibiotics are the most used worldwide for the treatment of bacterial infections. The consumption of these classes of drugs is high, and it is increasing around the world. To date, the best way to produce them is using penicillin G Acylase (PGA) as a biocatalyst. OBJECTIVE: This manuscript offers an overview of the most recent advances in the current tools to improve the activity of the PGA and its pharmaceutical application. RESULTS: Several microorganisms produce PGA, but some bacterial strains represent the primary source of this enzyme. The activity of bacterial PGA depends on its adequate expression and carbon or nitrogen source, as well as a specific pH or temperature depending on the nature of the PGA. Additionally, the PGA activity can be enhanced by immobilizing it to a solid support to recycle it for a prolonged time. Likewise, PGAs more stable and with higher activity are obtained from bacterial hosts genetically modified. CONCLUSION: PGA is used to produce b-lactam antibiotics. However, this enzyme has pharmaceutical potential to be used to obtain critical molecules for the synthesis of anti-tumor, antiplatelet, antiemetic, antidepressive, anti-retroviral, antioxidant, and antimutagenic drugs.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Biotechnology/methods , Penicillin Amidase/metabolism , Technology, Pharmaceutical/methods , beta-Lactams/chemical synthesis , Gram-Negative Bacteria/enzymology , Gram-Positive Bacteria/enzymology , Penicillin Amidase/genetics , Temperature
16.
Biotechnol Appl Biochem ; 66(6): 990-998, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31502318

ABSTRACT

In this work, TiO2 , which was modified by glutaraldehyde, was adopted as the carrier; the penicillin G acylase (PGA) was immobilized and the influence of immobilized conditions, such as pH of solution, the concentration of PGA, the immobilization temperature, and the reaction time, on the catalytic performance of the immobilized PGA was investigated and optimized. During this process, potassium penicillin G (PG) was chosen as substrate, and the quantity of 6-aminopenicillanic acid (6-APA) produced by PG at the temperature of 25 °C for 3 Min in neutral solution was conscripted as the evaluation foundation, indexes, containing the loading capacity (ELC), the activity (EA), and activity retention rate (EAR), were calculated based on quantities of produced 6-APA and compared with finding out the suitable conditions. Results showed that when the solution pH, PGA concentration, immobilization temperature, and reaction time were 8.0, 2.5% (v/v), 35 °C, and 24 H, respectively, ELC, EA, and EAR presented optimal values of 9,190 U, 14,969 U/g, and 88.5% relatedly. After that, the stability and reusability of immobilized PGA were studied, and the results documented that the pH resistance, thermal stability, and storage stability of immobilized PGA were significantly improved. This work provided technique support for the practical application of immobilized PGA carrier.


Subject(s)
Glutaral/metabolism , Penicillin Amidase/metabolism , Titanium/metabolism , Enzymes, Immobilized/metabolism , Glutaral/chemistry , Hydrogen-Ion Concentration , Solutions , Temperature
17.
Sci Rep ; 9(1): 12402, 2019 08 27.
Article in English | MEDLINE | ID: mdl-31455800

ABSTRACT

Semisynthetic cephalosporins are widely used antibiotics currently produced by different chemical steps under harsh conditions, which results in a considerable amount of toxic waste. Biocatalytic synthesis by the cephalosporin acylase from Pseudomonas sp. strain N176 is a promising alternative. Despite intensive engineering of the enzyme, the catalytic activity is still too low for a commercially viable process. To identify the bottlenecks which limit the success of protein engineering efforts, a series of MD simulations was performed to study for two acylase variants (WT, M6) the access of the substrate cephalosporin C from the bulk to the active site and the stability of the enzyme-substrate complex. In both variants, cephalosporin C was binding to a non-productive substrate binding site (E86α, S369ß, S460ß) at the entrance to the binding pocket, preventing substrate access. A second non-productive binding site (G372ß, W376ß, L457ß) was identified within the binding pocket, which competes with the active site for substrate binding. Noteworthy, substrate binding to the protein surface followed a Langmuir model resulting in binding constants K = 7.4 and 9.2 mM for WT and M6, respectively, which were similar to the experimentally determined Michaelis constants KM = 11.0 and 8.1 mM, respectively.


Subject(s)
Bacterial Proteins/metabolism , Penicillin Amidase/metabolism , Pseudomonas/enzymology , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Binding Sites , Biocatalysis , Catalytic Domain , Cephalosporins/chemistry , Cephalosporins/metabolism , Kinetics , Molecular Dynamics Simulation , Penicillin Amidase/chemistry , Penicillin Amidase/genetics , Protein Engineering , Substrate Specificity , Thermodynamics
18.
J Microbiol Biotechnol ; 29(6): 913-922, 2019 Jun 28.
Article in English | MEDLINE | ID: mdl-31154745

ABSTRACT

Magnetic Ni0.7Co0.3Fe2O4 nanoparticles that were prepared via the rapid combustion process were functionalized and modified to obtain magnetic Ni0.7Co0.3Fe2O4@SiO2-CHO nanocomposites, on which penicillin G acylase (PGA) was covalently immobilized. Selections of immobilization concentration and time of fixation were explored. Catalytic performance of immobilized PGA was characterized. The free PGA had greatest activity at pH 8.0 and 45oC while immobilized PGA's a ctivities peaked a t pH 7.5 and 45°C. Immobilized PGA had better thermal stability than free PGA at the range of 30-50°C for different time intervals. The activity of free PGA would be 0 and that of immobilized PGA still retained some activities at 60°C after 2 h. Vmax and Km of immobilized PGA were 1.55 mol/min and 0.15 mol/l, respectively. Free PGA's Vmax and Km separately were 0.74 mol/min and 0.028 mol/l. Immobilized PGA displayed more than 50% activity after 10 successive cycles. We concluded that immobilized PGA with magnetic Ni0.7Co0.3Fe2O4@SiO2-CHO nanocomposites could become a novel example for the immobilization of other amidohydrolases.


Subject(s)
Cobalt/chemistry , Enzymes, Immobilized/chemistry , Magnetite Nanoparticles/chemistry , Nanocomposites/chemistry , Nickel/chemistry , Penicillin Amidase/chemistry , Penicillin Amidase/metabolism , Catalysis , Enzyme Stability , Enzymes, Immobilized/metabolism , Glutaral/chemistry , Hydrogen-Ion Concentration , Silicon Dioxide/chemistry , Temperature
19.
Biotechnol Prog ; 35(5): e2846, 2019 09.
Article in English | MEDLINE | ID: mdl-31099990

ABSTRACT

In a stirred tank reactor, during catalysis with immobilized cephalosporin C acylase (CCA), the microenvironmental pH dropped to 7.2 in a nonbuffered system (with the pH maintained at 8.5 by adding alkali) due to the existence of diffusional resistance. Moreover, the immobilized CCA only catalyzed five batch reactions, suggesting that the sharp pH gradient impaired the enzyme stability. To buffer the protons produced in the hydrolysis of cephalosporin C by CCA, phosphate and bicarbonate buffers were introduced. When CCA was catalyzed with 0.1 M ammonium bicarbonate buffer, no obvious gradient between the bulk solution and intraparticle pH was detected, and the catalysis of 15 batch reactions was achieved. Accordingly, with 0.2 M ammonium bicarbonate buffer in a packed bed reactor, the immobilized CCA exhibited continuous catalysis with high conversion rates (≥95%) for 21 days. Reactions with ammonium bicarbonate buffer showed significant increases in the stability and catalytic efficiency of the immobilized CCA in different reactors compared to those in nonbuffered systems.


Subject(s)
Bicarbonates/chemistry , Bioreactors , Cephalosporins/metabolism , Enzymes, Immobilized/metabolism , Penicillin Amidase/metabolism , Bicarbonates/pharmacology , Enzyme Stability/drug effects , Hydrogen-Ion Concentration
20.
Colloids Surf B Biointerfaces ; 179: 153-160, 2019 Jul 01.
Article in English | MEDLINE | ID: mdl-30954878

ABSTRACT

The immobilized penicillin G acylase (PGA) is an important industrial catalyst, the activity recovery rate of it directly affects enterprise efficiency. How to improve the enzyme activity recovery rate has been a research focus in this field. Based on the above problems, this work further improved the activity recovery rate by adjusting the target spacing for the first time. Glycidyl methacrylate (GMA) was used as the immobilized target and methyl methacrylate (MMA) as the copolymer monomer. According to the copolymer composition equation of P(MMA-co-GMA), the thermo-sensitive copolymers, PDEA-b-PHEMA-b-P(MMA-co-GMA) with different target spacings, were synthesized rapidly and efficiently via reversible addition-fragmentation chain transfer (RAFT) polymerization method. The error range between the theoretical and actual values of MMA and GMA in the copolymers carrier was (0-4)%, which demonstrated that the reliability of using composition equation to accurately and quickly synthesize copolymers with specific spacing. Studies on the thermo-sensitive showed that the low critical solution temperature (LCST) of the copolymer carrier decreased with the increase of hydrophobic monomer. Most importantly, the activity recovery rate increased with the increase of target spacing, and when the molar ratio of MMA to GMA in the copolymer was 8.75:1, the recovery of activity of immobilized PGA could be up to 63.50%, which was 21.70% higher than that of pure GMA. This work provided an important idea for improving the activity of immobilized PGA.


Subject(s)
Drug Carriers/chemistry , Enzymes, Immobilized/metabolism , Penicillin Amidase/metabolism , Temperature , Molecular Weight , Polymers/chemistry , Proton Magnetic Resonance Spectroscopy , Regression Analysis
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