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1.
Antonie Van Leeuwenhoek ; 117(1): 92, 2024 Jul 01.
Article in English | MEDLINE | ID: mdl-38949726

ABSTRACT

Biological control is a promising approach to enhance pathogen and pest control to ensure high productivity in cash crop production. Therefore, PGPR biofertilizers are very suitable for application in the cultivation of tea plants (Camellia sinensis) and tobacco, but it is rarely reported so far. In this study, production of a consortium of three strains of PGPR were applied to tobacco and tea plants. The results demonstrated that plants treated with PGPR exhibited enhanced resistance against the bacterial pathogen Pseudomonas syringae (PstDC3000). The significant effect in improving the plant's ability to resist pathogen invasion was verified through measurements of oxygen activity, bacterial colony counts, and expression levels of resistance-related genes (NPR1, PR1, JAZ1, POD etc.). Moreover, the application of PGPR in the tea plantation showed significantly reduced population occurrences of tea green leafhoppers (Empoasca onukii Matsuda), tea thrips (Thysanoptera:Thripidae), Aleurocanthus spiniferus (Quaintanca) and alleviated anthracnose disease in tea seedlings. Therefore, PGPR biofertilizers may serve as a viable biological control method to improve tobacco and tea plant yield and quality. Our findings revealed part of the mechanism by which PGPR helped improve plant biostresses resistance, enabling better application in agricultural production.


Subject(s)
Nicotiana , Pest Control, Biological , Plant Diseases , Pseudomonas syringae , Animals , Plant Diseases/microbiology , Plant Diseases/prevention & control , Nicotiana/microbiology , Pseudomonas syringae/physiology , Pest Control, Biological/methods , Camellia sinensis/microbiology , Camellia sinensis/growth & development , Insecta/microbiology , Thysanoptera/microbiology , Disease Resistance , Plant Development , Biological Control Agents , Hemiptera/microbiology
2.
PeerJ ; 12: e17578, 2024.
Article in English | MEDLINE | ID: mdl-38948222

ABSTRACT

In the eastern coastal regions of Odisha, wilt caused by Fusarium oxysporum f. sp.capsici is an extremely damaging disease in chilli. This disease is very difficult to manage with chemical fungicides since it is soil-borne in nature. The natural rhizosphere soil of the chilli plant was used to isolate and test bacterial antagonists for their effectiveness and ability to promote plant growth. Out of the fifty-five isolates isolated from the rhizosphere of healthy chilli plants, five isolates, namely Iso 01, Iso 17, Iso 23, Iso 24, and Iso 32, showed their highly antagonistic activity against F. oxysporum f. sp. capsici under in vitro. In a dual culture, Iso 32 (73.3%) and Iso 24 (71.5%) caused the highest level of pathogen inhibition. In greenhouse trials, artificially inoculated chilli plants treated with Iso 32 (8.8%) and Iso 24 (10.2%) had decreased percent disease incidence (PDI), with percent disease reduction over control of 85.6% and 83.3%, respectively. Iso 32 and Iso 24 treated chilli seeds have shown higher seed vigor index of 973.7 and 948.8, respectively, as compared to untreated control 636.5. Furthermore, both the isolates significantly increased plant height as well as the fresh and dry weight of chilli plants under the rolled paper towel method. Morphological, biochemical, and molecular characterization identified Bacillus amyloliquefaciens (MH491049) as the key antagonist. This study demonstrates that rhizobacteria, specifically Iso 32 and Iso 24, can effectively protect chilli plants against Fusarium wilt while promoting overall plant development. These findings hold promise for sustainable and eco-friendly management of Fusarium wilt in chilli cultivation.


Subject(s)
Fusarium , Plant Diseases , Rhizosphere , Soil Microbiology , Fusarium/isolation & purification , Fusarium/pathogenicity , Fusarium/drug effects , Fusarium/growth & development , Plant Diseases/microbiology , Plant Diseases/prevention & control , Capsicum/microbiology , Capsicum/growth & development , Antibiosis/physiology , Plant Development
3.
Mol Biol Rep ; 51(1): 810, 2024 Jul 13.
Article in English | MEDLINE | ID: mdl-39001942

ABSTRACT

Carotenoids, natural tetraterpenoids found abundantly in plants, contribute to the diverse colors of plant non-photosynthetic tissues and provide fragrance through their cleavage products, which also play crucial roles in plant growth and development. Understanding the synthesis, degradation, and storage pathways of carotenoids and identifying regulatory factors represents a significant strategy for enhancing plant quality. Chromoplasts serve as the primary plastids responsible for carotenoid accumulation, and their differentiation is linked to the levels of carotenoids, rendering them a subject of substantial research interest. The differentiation of chromoplasts involves alterations in plastid structure and protein import machinery. Additionally, this process is influenced by factors such as the ORANGE (OR) gene, Clp proteases, xanthophyll esterification, and environmental factors. This review shows the relationship between chromoplast and carotenoid accumulation by presenting recent advances in chromoplast structure, the differentiation process, and key regulatory factors, which can also provide a reference for rational exploitation of chromoplasts to enhance plant quality.


Subject(s)
Carotenoids , Gene Expression Regulation, Plant , Plastids , Plastids/metabolism , Carotenoids/metabolism , Plants/metabolism , Plants/genetics , Plant Proteins/metabolism , Plant Proteins/genetics , Plant Development/genetics , Cell Differentiation
4.
Sci Rep ; 14(1): 15546, 2024 Jul 05.
Article in English | MEDLINE | ID: mdl-38969785

ABSTRACT

Plant growth-promoting rhizobacteria (PGPR) boost crop yields and reduce environmental pressures through biofilm formation in natural climates. Recently, biofilm-based root colonization by these microorganisms has emerged as a promising strategy for agricultural enhancement. The current work aims to characterize biofilm-forming rhizobacteria for wheat growth and yield enhancement. For this, native rhizobacteria were isolated from the wheat rhizosphere and ten isolates were characterized for plant growth promoting traits and biofilm production under axenic conditions. Among these ten isolates, five were identified as potential biofilm-producing PGPR based on in vitro assays for plant growth-promoting traits. These were further evaluated under controlled and field conditions for their impact on wheat growth and yield attributes. Surface-enhanced Raman spectroscopy analysis further indicated that the biochemical composition of the biofilm produced by the selected bacterial strains includes proteins, carbohydrates, lipids, amino acids, and nucleic acids (DNA/RNA). Inoculated plants in growth chamber resulted in larger roots, shoots, and increase in fresh biomass than controls. Similarly, significant increases in plant height (13.3, 16.7%), grain yield (29.6, 17.5%), number of tillers (18.7, 34.8%), nitrogen content (58.8, 48.1%), and phosphorus content (63.0, 51.0%) in grains were observed in both pot and field trials, respectively. The two most promising biofilm-producing isolates were identified through 16 s rRNA partial gene sequencing as Brucella sp. (BF10), Lysinibacillus macroides (BF15). Moreover, leaf pigmentation and relative water contents were significantly increased in all treated plants. Taken together, our results revealed that biofilm forming PGPR can boost crop productivity by enhancing growth and physiological responses and thus aid in sustainable agriculture.


Subject(s)
Biofilms , Plant Roots , Rhizosphere , Soil Microbiology , Triticum , Triticum/microbiology , Triticum/growth & development , Biofilms/growth & development , Plant Roots/microbiology , Plant Roots/growth & development , Bacteria/classification , Bacteria/genetics , Bacteria/metabolism , Bacteria/growth & development , Bacteria/isolation & purification , Plant Development , Biomass
5.
BMC Genomics ; 25(1): 672, 2024 Jul 05.
Article in English | MEDLINE | ID: mdl-38969999

ABSTRACT

The scarcity of freshwater resources resulting in a significant yield loss presents a pressing challenge in agriculture. To address this issue, utilizing abundantly available saline water could offer a smart solution. In this study, we demonstrate that the genome sequence rhizosphere bacterium Tritonibacter mobilis AK171, a halophilic marine bacterium recognized for its ability to thrive in saline and waterlogged environments, isolated from mangroves, has the remarkable ability to enable plant growth using saline irrigation. AK171 is characterized as rod-shaped cells, displays agile movement in free-living conditions, and adopts a rosette arrangement in static media. Moreover, The qualitative evaluation of PGP traits showed that AK171 could produce siderophores and IAA but could not solubilize phosphate nor produce hydrolytic enzymes it exhibits a remarkable tolerance to high temperatures and salinity. In this study, we conducted a comprehensive genome sequence analysis of T. mobilis AK171 to unravel the genetic mechanisms underlying its plant growth-promoting abilities in such challenging conditions. Our analysis revealed diverse genes and pathways involved in the bacterium's adaptation to salinity and waterlogging stress. Notably, T. mobilis AK171 exhibited a high level of tolerance to salinity and waterlogging through the activation of stress-responsive genes and the production of specific enzymes and metabolites. Additionally, we identified genes associated with biofilm formation, indicating its potential role in establishing symbiotic relationships with host plants. Furthermore, our analysis unveiled the presence of genes responsible for synthesizing antimicrobial compounds, including tropodithietic acid (TDA), which can effectively control phytopathogens. This genomic insight into T. mobilis AK171 provides valuable information for understanding the molecular basis of plant-microbial interactions in saline and waterlogged environments. It offers potential applications for sustainable agriculture in challenging conditions.


Subject(s)
Avicennia , Avicennia/microbiology , Genome, Bacterial , Genomics , Rhizosphere , Salinity , Phylogeny , Plant Development , Siderophores/metabolism
6.
Int J Mol Sci ; 25(13)2024 Jun 21.
Article in English | MEDLINE | ID: mdl-38999944

ABSTRACT

Bri1-EMS Suppressor 1 (BES1) and Brassinazole Resistant 1 (BZR1) are two key transcription factors in the brassinosteroid (BR) signaling pathway, serving as crucial integrators that connect various signaling pathways in plants. Extensive genetic and biochemical studies have revealed that BES1 and BZR1, along with other protein factors, form a complex interaction network that governs plant growth, development, and stress tolerance. Among the interactome of BES1 and BZR1, several proteins involved in posttranslational modifications play a key role in modifying the stability, abundance, and transcriptional activity of BES1 and BZR1. This review specifically focuses on the functions and regulatory mechanisms of BES1 and BZR1 protein interactors that are not involved in the posttranslational modifications but are crucial in specific growth and development stages and stress responses. By highlighting the significance of the BZR1 and BES1 interactome, this review sheds light on how it optimizes plant growth, development, and stress responses.


Subject(s)
Arabidopsis Proteins , DNA-Binding Proteins , Gene Expression Regulation, Plant , Nuclear Proteins , Plant Development , Stress, Physiological , Plant Development/genetics , Nuclear Proteins/metabolism , Nuclear Proteins/genetics , DNA-Binding Proteins/metabolism , DNA-Binding Proteins/genetics , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Transcription Factors/metabolism , Brassinosteroids/metabolism , Signal Transduction , Protein Processing, Post-Translational , Protein Binding
7.
Curr Microbiol ; 81(9): 270, 2024 Jul 16.
Article in English | MEDLINE | ID: mdl-39012372

ABSTRACT

Plant development and yield are severely hampered by climate change. Plants are very prone to a variety of abiotic stressors during growth, making them susceptible to destruction which can reduce the productivity by 20-60%. These stresses generate reactive oxygen species (ROS), which damage lipids, proteins, and nucleic acids. Microalgae and plant growth-promoting bacteria (PGPB) are remarkably effective at reducing the effects of salt stress and promoting plant growth, thereby increasing agricultural yield, and helping ensure global food security. Through a variety of mechanisms, including the production of phytohormones, 1-aminocyclopropane-1-carboxylic acid deaminase, exopolysaccharide, siderophores, hydrogen cyanide, extracellular polymeric substances, volatile organic compounds, and modulation of antioxidants defense machinery under abiotic stresses promote plant growth after inoculation of PGPB and microalgae. These microorganisms also maintain ion homeostasis, offer osmotic balance, stimulate genes that respond to salt and drought, rewire the metabolism, modify the transcription of ion transporter genes, and more. To counteract the negative consequences of salinity stress, this study summarizes the effects of PGPB- microalgae along with a tentative protective mechanism during salinity stress for sustainable agriculture.


Subject(s)
Microalgae , Salt Stress , Microalgae/metabolism , Microalgae/growth & development , Bacteria/metabolism , Bacteria/genetics , Bacteria/classification , Plants/metabolism , Plants/microbiology , Plant Development , Plant Growth Regulators/metabolism
8.
Sci Rep ; 14(1): 15934, 2024 Jul 10.
Article in English | MEDLINE | ID: mdl-38987320

ABSTRACT

The draft genome sequence of an agriculturally important actinobacterial species Amycolatopsis sp. BCA-696 was developed and characterized in this study. Amycolatopsis BCA-696 is known for its biocontrol properties against charcoal rot and also for plant growth-promotion (PGP) in several crop species. The next-generation sequencing (NGS)-based draft genome of Amycolatopsis sp. BCA-696 comprised of ~ 9.05 Mb linear chromosome with 68.75% GC content. In total, 8716 protein-coding sequences and 61 RNA-coding sequences were predicted in the genome. This newly developed genome sequence has been also characterized for biosynthetic gene clusters (BGCs) and biosynthetic pathways. Furthermore, we have also reported that the Amycolatopsis sp. BCA-696 produces the glycopeptide antibiotic vancomycin that inhibits the growth of pathogenic gram-positive bacteria. A comparative analysis of the BCA-696 genome with publicly available closely related genomes of 14 strains of Amycolatopsis has also been conducted. The comparative analysis has identified a total of 4733 core and 466 unique orthologous genes present in the BCA-696 genome The unique genes present in BCA-696 was enriched with antibiotic biosynthesis and resistance functions. Genome assembly of the BCA-696 has also provided genes involved in key pathways related to PGP and biocontrol traits such as siderophores, chitinase, and cellulase production.


Subject(s)
Amycolatopsis , Genome, Bacterial , Genomics , Genomics/methods , Amycolatopsis/genetics , Amycolatopsis/metabolism , Multigene Family , Plant Development/genetics , High-Throughput Nucleotide Sequencing , Phylogeny , Vancomycin/pharmacology
9.
Methods Mol Biol ; 2827: 35-50, 2024.
Article in English | MEDLINE | ID: mdl-38985261

ABSTRACT

Temporary immersion systems (TIS) have been widely recognized as a promising technology for micropropagation of various plant species. The TIS provides a suitable environment for culture and allows intermittent contact of the explant with the culture medium at different immersion frequencies and aeration of the culture in each cycle. The frequency or immersion is one of the most critical parameters for the efficiency of these systems. The design, media volume, and container capacity substantially improve cultivation efficiency. Different TIS have been developed and successfully applied to micropropagation in various in vitro systems, such as sprout proliferation, microcuttings, and somatic embryos. TIS increases multiplication and conversion rates to plants and a better response during the ex vitro acclimatization phase. This article covers the use of different immersion systems and their applications in plant biotechnology, particularly in plant tissue culture, as well as its use in the massive propagation of plants of agroeconomic interest.


Subject(s)
Acclimatization , Plant Development , Culture Media/chemistry , Tissue Culture Techniques/methods , Tissue Culture Techniques/instrumentation , Plant Shoots/growth & development , Plant Shoots/physiology , Plants , Immersion , Plant Somatic Embryogenesis Techniques/methods
10.
Methods Mol Biol ; 2827: 109-143, 2024.
Article in English | MEDLINE | ID: mdl-38985266

ABSTRACT

Plant growth regulators are routinely added to in vitro culture media to foster the growth and differentiation of the cells, tissues, and organs. However, while the literature on usage of the more common auxins, cytokinins, gibberellins, abscisic acid, and ethylene is vast, other compounds that also have shown a growth-regulating activity have not been studied as frequently. Such substances are also capable of modulating the responses of plant cells and tissues in vitro by regulating their growth, differentiation, and regeneration competence, but also by enhancing their responses toward biotic and abiotic stress agents and improving the production of secondary metabolites of interest. This chapter will discuss the in vitro effects of several of such less frequently added plant growth regulators, including brassinosteroids (BRS), strigolactones (SLs), phytosulfokines (PSKs), methyl jasmonate, salicylic acid (SA), sodium nitroprusside (SNP), hydrogen sulfite, various plant growth retardants and inhibitors (e.g., ancymidol, uniconazole, flurprimidol, paclobutrazol), and polyamines.


Subject(s)
Plant Growth Regulators , Plant Growth Regulators/pharmacology , Plant Growth Regulators/metabolism , Tissue Culture Techniques/methods , Brassinosteroids/pharmacology , Brassinosteroids/metabolism , Plant Development/drug effects , Plants/metabolism , Plants/drug effects , Lactones/pharmacology , Lactones/metabolism , Oxylipins/pharmacology , Oxylipins/metabolism , Cyclopentanes/pharmacology , Cyclopentanes/metabolism , Salicylic Acid/pharmacology , Salicylic Acid/metabolism , Acetates/pharmacology , Acetates/metabolism
11.
Postepy Biochem ; 69(4): 245-253, 2024 01 30.
Article in Polish | MEDLINE | ID: mdl-39012701

ABSTRACT

Vacuolar processing enzymes (VPEs) are plant proteases belonging to the C13 protease family. The specific activity of VPEs was characterized by comparing them to animal caspases. VPEs perform many important functions at various stages of plant ontogenesis, playing a role not only in the proper development of the plant organism but also in plant reactions to biotic and abiotic stress factors. A particularly important role of VPEs is noted in the processing of vacuolar proteins, enabling the production of their mature and active forms. VPEs are involved in programmed cell death, but despite residual evidence, we also suggest that VPEs are involved in autophagy. Based on literature data on autophagy in yeast, we formulate a hypothesis that VPEs during autophagy in plant cells are involved in the degradation of autophagic bodies - one of the final stages of autophagy.


Subject(s)
Autophagy , Vacuoles , Autophagy/physiology , Vacuoles/metabolism , Plants , Plant Proteins/metabolism , Plant Development/physiology , Cysteine Endopeptidases
12.
Plant Cell Rep ; 43(8): 198, 2024 Jul 18.
Article in English | MEDLINE | ID: mdl-39023775

ABSTRACT

KEY MESSAGE: Plants respond to environmental challenges by producing reactive species such as ROS and RNS, which play critical roles in signaling pathways that lead to adaptation and survival strategies. Understanding these pathways, as well as their detection methods and effects on plant development and metabolism, provides insight into increasing crop tolerance to combined stresses. Plants encounter various environmental stresses (abiotic and biotic) that affect plant growth and development. Plants sense biotic and abiotic stresses by producing different molecules, including reactive species, that act as signaling molecules and stimulate secondary messengers and subsequent gene transcription. Reactive oxygen and nitrogen species (ROS and RNS) are produced in both physiological and pathological conditions in the plasma membranes, chloroplasts, mitochondria, and endoplasmic reticulum. Various techniques, including spectroscopy, chromatography, and fluorescence methods, are used to detect highly reactive, short-half-life ROS and RNS either directly or indirectly. In this review, we highlight the roles of ROS and RNS in seed germination, root development, senescence, mineral nutrition, and post-harvest control. In addition, we provide information on the specialized metabolism involved in plant growth and development. Secondary metabolites, including alkaloids, flavonoids, and terpenoids, are produced in low concentrations in plants for signaling and metabolism. Strategies for improving crop performance under combined drought and pathogen stress conditions are discussed in this review.


Subject(s)
Plants , Reactive Nitrogen Species , Reactive Oxygen Species , Signal Transduction , Stress, Physiological , Reactive Oxygen Species/metabolism , Reactive Nitrogen Species/metabolism , Plants/metabolism , Plant Physiological Phenomena , Plant Development
13.
Nat Commun ; 15(1): 5969, 2024 Jul 16.
Article in English | MEDLINE | ID: mdl-39013920

ABSTRACT

The proficiency of phyllosphere microbiomes in efficiently utilizing plant-provided nutrients is pivotal for their successful colonization of plants. The methylotrophic capabilities of Methylobacterium/Methylorubrum play a crucial role in this process. However, the precise mechanisms facilitating efficient colonization remain elusive. In the present study, we investigate the significance of methanol assimilation in shaping the success of mutualistic relationships between methylotrophs and plants. A set of strains originating from Methylorubrum extorquens AM1 are subjected to evolutionary pressures to thrive under low methanol conditions. A mutation in the phosphoribosylpyrophosphate synthetase gene is identified, which converts it into a metabolic valve. This valve redirects limited C1-carbon resources towards the synthesis of biomass by up-regulating a non-essential phosphoketolase pathway. These newly acquired bacterial traits demonstrate superior colonization capabilities, even at low abundance, leading to increased growth of inoculated plants. This function is prevalent in Methylobacterium/Methylorubrum strains. In summary, our findings offer insights that could guide the selection of Methylobacterium/Methylorubrum strains for advantageous agricultural applications.


Subject(s)
Methanol , Methylobacterium , Methylobacterium/metabolism , Methylobacterium/genetics , Methylobacterium/enzymology , Methylobacterium/growth & development , Methanol/metabolism , Symbiosis , Mutation , Aldehyde-Lyases/metabolism , Aldehyde-Lyases/genetics , Bacterial Proteins/metabolism , Bacterial Proteins/genetics , Plant Leaves/microbiology , Plant Leaves/growth & development , Methylobacterium extorquens/genetics , Methylobacterium extorquens/metabolism , Methylobacterium extorquens/growth & development , Methylobacterium extorquens/enzymology , Plant Development , Microbiota/genetics , Biomass
14.
Gen Physiol Biophys ; 43(4): 347-351, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38953576

ABSTRACT

Since the acid growth theory was introduced in plant physiology and mainframe computers became more widely available in the mid-20th century, there has been a growing need to accurately predict plant cell morphological parameters during growth. This article presents a computer program that uses an original numerical method to solve a highly nonlinear growth equation. The program is written in Python, a popular open-source scientific software environment called CoCalc or SAGE. This program can be used to determine the growth of an individual plant cell or multicellular organ, such as a coleoptile or hypocotyl segment, at the non-meristemic limit. This standalone program is designed to be user-friendly and accessible to all readers, without barriers. With only a few key parameters, including pH and temperature, this program provides a practical set of tools for comparing growth-related experimental data across various areas of plant biology. Additionally, it could be useful in predicting plant growth during assisted migration, particularly in the face of climate change.


Subject(s)
Plant Development , Software , Plant Development/physiology , Models, Biological , Computer Simulation , Algorithms
15.
Arch Microbiol ; 206(8): 341, 2024 Jul 05.
Article in English | MEDLINE | ID: mdl-38967784

ABSTRACT

Soil salinization poses a great threat to global agricultural ecosystems, and finding ways to improve the soils affected by salt and maintain soil health and sustainable productivity has become a major challenge. Various physical, chemical and biological approaches are being evaluated to address this escalating environmental issue. Among them, fully utilizing salt-tolerant plant growth-promoting bacteria (PGPB) has been labeled as a potential strategy to alleviate salt stress, since they can not only adapt well to saline soil environments but also enhance soil fertility and plant development under saline conditions. In the last few years, an increasing number of salt-tolerant PGPB have been excavated from specific ecological niches, and various mechanisms mediated by such bacterial strains, including but not limited to siderophore production, nitrogen fixation, enhanced nutrient availability, and phytohormone modulation, have been intensively studied to develop microbial inoculants in agriculture. This review outlines the positive impacts and growth-promoting mechanisms of a variety of salt-tolerant PGPB and opens up new avenues to commercialize cultivable microbes and reduce the detrimental impacts of salt stress on plant growth. Furthermore, considering the practical limitations of salt-tolerant PGPB in the implementation and potential integration of advanced biological techniques in salt-tolerant PGPB to enhance their effectiveness in promoting sustainable agriculture under salt stress are also accentuated.


Subject(s)
Bacteria , Crops, Agricultural , Salt Stress , Soil Microbiology , Crops, Agricultural/microbiology , Crops, Agricultural/growth & development , Bacteria/metabolism , Bacteria/genetics , Bacteria/growth & development , Plant Development , Salt Tolerance , Plant Growth Regulators/metabolism , Soil/chemistry , Salt-Tolerant Plants/microbiology , Salt-Tolerant Plants/growth & development , Salinity
16.
Methods Mol Biol ; 2827: 1-13, 2024.
Article in English | MEDLINE | ID: mdl-38985259

ABSTRACT

Plant cell, tissue, and organ cultures (PCTOC) have been used as experimental systems in basic research, allowing gene function demonstration through gene overexpression or repression and investigating the processes involved in embryogenesis and organogenesis or those related to the potential production of secondary metabolites, among others. On the other hand, PCTOC has also been applied at the commercial level for the vegetative multiplication (micropropagation) of diverse plant species, mainly ornamentals but also horticultural crops such as potato or fruit and tree species, and to produce high-quality disease-free plants. Moreover, PCTOC protocols are important auxiliary systems in crop breeding crops to generate pure lines (homozygous) to produce hybrids for the obtention of polyploid plants with higher yields or better performance. PCTOC has been utilized to preserve and conserve the germplasm of different crops or threatened species. Plant genetic improvement through genetic engineering and genome editing has been only possible thanks to the establishment of efficient in vitro plant regeneration protocols. Different companies currently focus on commercializing plant secondary metabolites with interesting biological activities using in vitro PCTOC. The impact of omics on PCTOC is discussed.


Subject(s)
Plant Cells , Tissue Culture Techniques , Cell Culture Techniques/methods , Crops, Agricultural/genetics , Crops, Agricultural/growth & development , Plant Breeding/methods , Plant Cells/metabolism , Plant Development/genetics , Plants/genetics , Plants/metabolism , Tissue Culture Techniques/methods
17.
Sci Rep ; 14(1): 15830, 2024 Jul 09.
Article in English | MEDLINE | ID: mdl-38982145

ABSTRACT

Demequina, commonly found in coastal and marine environments, represents a genus of Actinomycetes. In this study, strains Demequina PMTSA13T and OYTSA14 were isolated from the rhizosphere of Capsicum annuum, leading to the discovery of a novel species, Demequina capsici. Bacteria play a significant role in plant growth, yet there have been no reports of the genus Demequina acting as plant growth-promoting bacteria (PGPB). Comparative genomics analysis revealed ANI similarity values of 74.05-80.63% for PMTSA13T and 74.02-80.54% for OYTSA14, in comparison to various Demequina species. The digital DNA-DNA hybridization (dDDH) values for PMTSA13T ranged from 19 to 39%, and 19.1-38.6% for OYTSA14. Genome annotation revealed the presence of genes associated with carbohydrate metabolism and transport, suggesting a potential role in nutrient cycling and availability for plants. These strains were notably rich in genes related to 'carbohydrate metabolism and transport (G)', according to their Cluster of Orthologous Groups (COG) classification. Additionally, both strains were capable of producing auxin (IAA) and exhibited enzymatic activities for cellulose degradation and catalase. Furthermore, PMTSA13T and OYTSA14 significantly induced the growth of Arabidopsis thaliana seedlings primarily attributed to their capacity to produce IAA, which plays a crucial role in stimulating plant growth and development. These findings shed light on the potential roles of Demequina strains in plant-microbe interactions and agricultural applications. The type strain is Demequina capsici PMTSA13T (= KCTC 59028T = GDMCC 1.4451T), meanwhile OYTSA14 is identified as different strains of Demequina capsici.


Subject(s)
Capsicum , Phylogeny , Rhizosphere , Capsicum/microbiology , Capsicum/growth & development , Soil Microbiology , Actinobacteria/genetics , Actinobacteria/isolation & purification , Actinobacteria/classification , RNA, Ribosomal, 16S/genetics , Genome, Bacterial , Plant Development
18.
Glob Chang Biol ; 30(7): e17406, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38982862

ABSTRACT

Temperature extremes exert a significant influence on terrestrial ecosystems, but the precise levels at which these extremes trigger adverse shifts in vegetation productivity have remained elusive. In this study, we have derived two critical thresholds, using standard deviations (SDs) of growing-season temperature and satellite-based vegetation productivity as key indicators. Our findings reveal that, on average, vegetation productivity experiences rapid suppression when confronted with temperature anomalies exceeding 1.45 SD above the mean temperature during 2001-2018. Furthermore, at temperatures exceeding 2.98 SD above the mean, we observe the maximum level of suppression, particularly in response to the most extreme high-temperature events. When Earth System Models are driven by a future medium emission scenario, they project that mean temperatures will routinely surpass both of these critical thresholds by approximately the years 2050 and 2070, respectively. However, it is important to note that the timing of these threshold crossings exhibits spatial variation and will appear much earlier in tropical regions. Our finding highlights that restricting global warming to just 1.5°C can increase safe areas for vegetation growth by 13% compared to allowing warming to reach 2°C above preindustrial levels. This mitigation strategy helps avoid exposure to detrimental extreme temperatures that breach these thresholds. Our study underscores the pivotal role of climate mitigation policies in fostering the sustainable development of terrestrial ecosystems in a warming world.


Subject(s)
Global Warming , Ecosystem , Plant Development , Temperature , Seasons , Hot Temperature , Climate Models , Plants , Climate Change
19.
Int J Mol Sci ; 25(12)2024 Jun 20.
Article in English | MEDLINE | ID: mdl-38928504

ABSTRACT

Melatonin (MEL), a hormone primarily known for its role in regulating sleep and circadian rhythms in animals, has emerged as a multifaceted molecule in plants. Recent research has shed light on its diverse functions in plant growth and defense mechanisms. This review explores the intricate roles of MEL in plant growth and defense responses. MEL is involved in plant growth owing to its influence on hormone regulation. MEL promotes root elongation and lateral root formation and enhances photosynthesis, thereby promoting overall plant growth and productivity. Additionally, MEL is implicated in regulating the circadian rhythm of plants, affecting key physiological processes that influence plant growth patterns. MEL also exhibits antioxidant properties and scavenges reactive oxygen species, thereby mitigating oxidative stress. Furthermore, it activates defense pathways against various biotic stressors. MEL also enhances the production of secondary metabolites that contribute to plant resistance against environmental changes. MEL's ability to modulate plant response to abiotic stresses has also been extensively studied. It regulates stomatal closure, conserves water, and enhances stress tolerance by activating stress-responsive genes and modulating signaling pathways. Moreover, MEL and nitric oxide cooperate in stress responses, antioxidant defense, and plant growth. Understanding the mechanisms underlying MEL's actions in plants will provide new insights into the development of innovative strategies for enhancing crop productivity, improving stress tolerance, and combating plant diseases. Further research in this area will deepen our knowledge of MEL's intricate functions and its potential applications in sustainable agriculture.


Subject(s)
Melatonin , Plant Development , Melatonin/metabolism , Antioxidants/metabolism , Stress, Physiological , Plants/metabolism , Circadian Rhythm/physiology , Plant Growth Regulators/metabolism , Gene Expression Regulation, Plant
20.
Plant Physiol Biochem ; 213: 108813, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38861821

ABSTRACT

In land plants plastid type differentiation occurs concomitantly with cellular differentiation and the transition from one type to another is under developmental and environmental control. Plastid dynamism is based on a bilateral communication between plastids and nucleus through anterograde and retrograde signaling. Signaling occurs through the interaction with specific phytohormones (abscisic acid, strigolactones, jasmonates, gibberellins, brassinosteroids, ethylene, salicylic acid, cytokinin and auxin). The review is focused on the modulation of plastid capabilities at both transcriptional and post-translational levels at the crossroad between development and stress, with a particular attention to the chloroplast, because the most studied plastid type. The role of plastid-encoded and nuclear-encoded proteins for plastid development and stress responses, and the changes of plastid fate through the activity of stromules and plastoglobules, are discussed. Examples of plastid dynamism in response to soil stress agents (salinity, lead, cadmium, arsenic, and chromium) are described. Albinism and root greening are described based on the modulation activities of auxin and cytokinin. The physiological and functional responses of the sensory epidermal and vascular plastids to abiotic and biotic stresses along with their specific roles in stress sensing are described together with their potential modulation of retrograde signaling pathways. Future research perspectives include an in-depth study of sensory plastids to explore their potential for establishing a transgenerational memory to stress. Suggestions about anterograde and retrograde pathways acting at interspecific level and on the lipids of plastoglobules as a novel class of plastid morphogenic agents are provided.


Subject(s)
Plastids , Plastids/metabolism , Plant Growth Regulators/metabolism , Signal Transduction , Stress, Physiological , Plant Development/physiology
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