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1.
Methods Enzymol ; 569: 177-96, 2016.
Article in English | MEDLINE | ID: mdl-26778559

ABSTRACT

Plectin and BPAG1e belong to the plakin family of high-molecular-weight proteins that interconnect the cytoskeletal systems and anchor them to junctional complexes. Plectin and BPAG1e are prototypical plakins with a similar tripartite modular structure. The N- and C-terminal regions are built of multiple discrete structural domains, while the central rod domain mediates dimerization by coiled-coil interactions. Owing to the mosaic organization of plakins, the structure of their constituent individual domains or small multi-domain segments can be analyzed isolated. Yet, understanding the integrated function of large regions, oligomers, and heterocomplexes of plakins is difficult due to the large and segmented structure. Here, we describe methods for the production of plectin and BPAG1e samples suitable for structural and biophysical analysis. In addition, we discuss the combination of hybrid methods that yield information at several resolution levels to study the complex, multi-domain, and flexible structure of plakins.


Subject(s)
Carrier Proteins/isolation & purification , Cytoskeletal Proteins/isolation & purification , Nerve Tissue Proteins/isolation & purification , Plectin/isolation & purification , Carrier Proteins/chemistry , Crystallography, X-Ray , Cytoskeletal Proteins/chemistry , Dystonin , Escherichia coli , Humans , Models, Molecular , Nerve Tissue Proteins/chemistry , Peptide Fragments/chemistry , Peptide Fragments/isolation & purification , Plectin/chemistry , Protein Structure, Secondary , Scattering, Small Angle
2.
Methods Enzymol ; 569: 235-59, 2016.
Article in English | MEDLINE | ID: mdl-26778562

ABSTRACT

Plectin is a large cytoskeletal linker protein with a multitude of functions affecting various cellular processes. It is expressed as several different isoforms from a highly complex gene. Both, this transcript diversity (mainly caused by short 5'-sequences contained in alternative first exons) and the size (>500 kDa) of the resulting proteins, present considerable challenges to plectin researchers. In this chapter, we will consider these problems and offer advice on how to tackle them best. As plectin has been studied most extensively in skin and muscle, we will focus on these types of tissues and describe some selected methods in detail. Foremost, however, we aim to give the readers some good pointers to available tools and into the existing literature.


Subject(s)
Muscle, Skeletal/metabolism , Plectin/genetics , Skin/metabolism , Animals , Cell Fractionation , Cells, Cultured , Escherichia coli , Gene Expression , Humans , Immunoprecipitation , Mice, Knockout , Muscle, Skeletal/cytology , Plectin/isolation & purification , Plectin/metabolism , Protein Isoforms/genetics , Protein Isoforms/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Skin/cytology
3.
Exp Cell Res ; 324(2): 172-82, 2014 Jun 10.
Article in English | MEDLINE | ID: mdl-24726610

ABSTRACT

Hemidesmosomes are cell-to-matrix adhesion complexes anchoring keratinocytes to basement membranes. For the first time, we present a method to prepare a fraction from human cultured cells that are highly enriched in hemidesmosomal proteins. Using DJM-1 cells derived from human squamous cell carcinoma, accumulation of hemidesmosomes was observed when these cells were cultured for more than 10 days in a commercial serum-free medium without supplemental calcium. Electron microscopy demonstrated that numerous electron-dense adhesion structures were present along the basal cell membranes of DJM-1 cells cultured under the aforementioned conditions. After removing cellular materials using an ammonia solution, hemidesmosomal proteins and deposited extracellular matrix were collected and separated by electrophoresis. There were eight major polypeptides, which were determined to be plectin, BP230, BP180, integrin α6 and ß4 subunits, and laminin-332 by immunoblotting and mass spectrometry. Therefore, we designated this preparation as a hemidesmosome-rich fraction. This fraction contained laminin-332 exclusively in its unprocessed form, which may account for the promotion of laminin deposition, and minimal amounts of Lutheran blood group protein, a nonhemidesmosomal transmembrane protein. This hemidesmosome-rich fraction would be useful not only for biological research on hemidesmosomes but also for developing a serum test for patients with blistering skin diseases.


Subject(s)
Carcinoma, Squamous Cell/ultrastructure , Hemidesmosomes/ultrastructure , Skin Neoplasms/ultrastructure , Autoantigens/isolation & purification , Autoantigens/metabolism , Carrier Proteins , Cell Adhesion Molecules/isolation & purification , Cell Adhesion Molecules/metabolism , Cell Fractionation , Cell Line, Tumor , Cytoskeletal Proteins , Dystonin , Hemidesmosomes/chemistry , Humans , Integrin alpha6/isolation & purification , Integrin alpha6/metabolism , Integrin beta4/isolation & purification , Integrin beta4/metabolism , Membrane Glycoproteins/isolation & purification , Membrane Glycoproteins/metabolism , Nerve Tissue Proteins , Non-Fibrillar Collagens/isolation & purification , Non-Fibrillar Collagens/metabolism , Plectin/isolation & purification , Plectin/metabolism , Subcellular Fractions , Kalinin , Collagen Type XVII
4.
J Cell Sci ; 120(Pt 14): 2435-43, 2007 Jul 15.
Article in English | MEDLINE | ID: mdl-17606998

ABSTRACT

Plectin, a widespread intermediate filament-based cytolinker protein capable of interacting with a variety of cytoskeletal structures and plasma membrane-bound junctional complexes, serves essential functions in maintenance of cell and tissue cytoarchitecture. We have generated a mouse line bearing floxed plectin alleles and conditionally deleted plectin in stratified epithelia. This strategy enabled us to study the consequences of plectin deficiency in this particular type of tissues in the context of the whole organism without plectin loss affecting other tissues. Conditional knockout mice died early after birth, showing signs of starvation and growth retardation. Blistering was observed on their extremities and on the oral epithelium after initial nursing, impairing food uptake. Knockout epidermis was very fragile and showed focal epidermal barrier defects caused by the presence of small skin lesions. Stratification, proliferation and differentiation of knockout skin seemed unaffected by epidermis-restricted plectin deficiency. In an additionally generated mouse model, tamoxifen-induced Cre-ER(T)-mediated recombination led to mice with a mosaic plectin deletion pattern in adult epidermis, combined with microblister formation and epidermal barrier defects. Our study explains the early lethality of plectin-deficient mice and provides a model to ablate plectin in adult animals which could be used for developing gene or pharmacological therapies.


Subject(s)
Epidermis/metabolism , Keratin-5/metabolism , Keratinocytes/pathology , Plectin/genetics , Plectin/metabolism , Skin Diseases/pathology , Animals , Blister/pathology , Carrier Proteins/isolation & purification , Carrier Proteins/metabolism , Cytoskeletal Proteins/isolation & purification , Cytoskeletal Proteins/metabolism , Cytoskeleton/metabolism , Dystonin , Epidermis/pathology , Gene Targeting , Integrases/genetics , Integrases/metabolism , Keratin-15 , Keratin-5/genetics , Keratinocytes/metabolism , Mice , Mice, Knockout , Nerve Tissue Proteins/isolation & purification , Nerve Tissue Proteins/metabolism , Plectin/isolation & purification , Skin Diseases/genetics , Skin Diseases/metabolism , Wnt Proteins/isolation & purification , Wnt Proteins/metabolism , Wnt3 Protein
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