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1.
Andrologia ; 54(10): e14556, 2022 Nov.
Article in English | MEDLINE | ID: mdl-36177795

ABSTRACT

This study aims to evaluate the expression of genes associated with the fertilisation potential and embryo development, sperm DNA fragmentation (SDF), and acrosome reaction in male partners of infertile couples with different sperm parameters compared to fertile men. First, male partners of infertile couples with abnormal (N = 25) and normal sperm parameters (N = 25), and fertile men (N = 10) were included in experimental groups I, II, and controls respectively. The mRNA levels of the Annexin A2 (ANXA2), Sperm protein 17 (SP17), Plasma serine protease inhibitor (SERPINA5), and Peroxiredoxin-2 (PRDX2) genes and SDF were evaluated. To evaluate the maturity of the sperm and oxidative stress, the acrosome reaction, the lipid peroxidation, and total antioxidant were measured. As result, SP17 showed a significantly lower expression in both experimental groups. SERPINA5 was significantly down-regulated in experimental group I that was aligned with the low rate of acrosome reaction. Significant overexpression of PRDX2 was found between experimental group II and controls. Significant higher rates of SDF were seen in both experimental groups compared to the controls. Finally, our data suggest that differentially gene expression of SP17 is a potential diagnostic biomarker in infertile men either with normal or abnormal sperm parameters. SDF is one of the causes of male infertility, independent of the sperm parameters.


Subject(s)
Annexin A2 , Calmodulin-Binding Proteins , Infertility, Male , Membrane Proteins , Peroxiredoxins , Protein C Inhibitor , Annexin A2/genetics , Antioxidants/metabolism , Biomarkers/metabolism , Calmodulin-Binding Proteins/genetics , DNA Fragmentation , Humans , Infertility, Male/etiology , Male , Membrane Proteins/genetics , Peroxiredoxins/genetics , Protein C Inhibitor/genetics , RNA, Messenger/metabolism , Semen/metabolism , Spermatozoa/metabolism
2.
Proc Natl Acad Sci U S A ; 118(45)2021 11 09.
Article in English | MEDLINE | ID: mdl-34740972

ABSTRACT

Serine proteases are essential for many physiological processes and require tight regulation by serine protease inhibitors (SERPINs). A disturbed SERPIN-protease balance may result in disease. The reactive center loop (RCL) contains an enzymatic cleavage site between the P1 through P1' residues that controls SERPIN specificity. This RCL can be modified to improve SERPIN function; however, a lack of insight into sequence-function relationships limits SERPIN development. This is complicated by more than 25 billion mutants needed to screen the entire P4 to P4' region. Here, we developed a platform to predict the effects of RCL mutagenesis by using α1-antitrypsin as a model SERPIN. We generated variants for each of the residues in P4 to P4' region, mutating them into each of the 20 naturally occurring amino acids. Subsequently, we profiled the reactivity of the resulting 160 variants against seven proteases involved in coagulation. These profiles formed the basis of an in silico prediction platform for SERPIN inhibitory behavior with combined P4 to P4' RCL mutations, which were validated experimentally. This prediction platform accurately predicted SERPIN behavior against five out of the seven screened proteases, one of which was activated protein C (APC). Using these findings, a next-generation APC-inhibiting α1-antitrypsin variant was designed (KMPR/RIRA; / indicates the cleavage site). This variant attenuates blood loss in an in vivo hemophilia A model at a lower dosage than the previously developed variant AIKR/KIPP because of improved potency and specificity. We propose that this SERPIN-based RCL mutagenesis approach improves our understanding of SERPIN behavior and will facilitate the design of therapeutic SERPINs.


Subject(s)
Drug Design , Models, Molecular , Protein C Inhibitor/genetics , Protein Engineering , alpha 1-Antitrypsin/genetics , Animals , Blood Coagulation Tests , Drug Evaluation, Preclinical , HEK293 Cells , Hemophilia A/drug therapy , Humans , Mice , Protein C Inhibitor/metabolism , Protein C Inhibitor/therapeutic use , Substrate Specificity , alpha 1-Antitrypsin/metabolism , alpha 1-Antitrypsin/therapeutic use
3.
Asian Pac J Cancer Prev ; 22(11): 3641-3646, 2021 Nov 01.
Article in English | MEDLINE | ID: mdl-34837923

ABSTRACT

BACKGROUND: A few researches evaluated the association of polymorphisms at SERPINA5 and fat mass and obesity-associated protein (FTO) genes with papillary thyroid cancer (PTC) globally. Here, we examined the presence of genetic variations within coding exon 3 of SERPINA5 gene and FTO rs9939609 polymorphism in Iranian PTC patients. METHODS: A total of 122 patients (42 cases for SERPINA5 and 80 cases for FTO gene) and 120 healthy subjects (40 subjects or SERPINA5 and 80 subjects for FTO gene) were recruited. The genetic variation within coding exon 3 of SERPINA5 gene was evaluated by reaction-single-strand conformation polymorphism (PCR-SSCP) and FTO rs9939609 polymorphism was evaluated by RFLP-PCR assay. RESULTS: The PCR-SSCP technique detected two rs6115G>A and rs6112T>C genetic variations within coding exon 3 of SERPINA5 gene and approved also by direct sequencing. For rs6112T>C polymorphism seven patients was heterozygous and for rs6115G>A seven PTC patients were heterozygous and two patients were homozygous. CONCLUSION: This study indicated that SERPINA5 rs6115G>A and rs6112T>C polymorphisms might be a novel susceptibility locus for PTC in Iranian patients. However, our findings do not support an association between FTO rs9939609 polymorphism and PTC risk.


Subject(s)
Alpha-Ketoglutarate-Dependent Dioxygenase FTO/genetics , Polymorphism, Single-Stranded Conformational/genetics , Protein C Inhibitor/genetics , Thyroid Cancer, Papillary/genetics , Thyroid Neoplasms/genetics , Alpha-Ketoglutarate-Dependent Dioxygenase FTO/blood , Case-Control Studies , Exons , Female , Humans , Iran , Male , Polymerase Chain Reaction , Protein C Inhibitor/blood , Thyroid Cancer, Papillary/blood , Thyroid Neoplasms/blood
4.
Nat Commun ; 12(1): 2311, 2021 04 19.
Article in English | MEDLINE | ID: mdl-33875655

ABSTRACT

Selective vulnerability of different brain regions is seen in many neurodegenerative disorders. The hippocampus and cortex are selectively vulnerable in Alzheimer's disease (AD), however the degree of involvement of the different brain regions differs among patients. We classified corticolimbic patterns of neurofibrillary tangles in postmortem tissue to capture extreme and representative phenotypes. We combined bulk RNA sequencing with digital pathology to examine hippocampal vulnerability in AD. We identified hippocampal gene expression changes associated with hippocampal vulnerability and used machine learning to identify genes that were associated with AD neuropathology, including SERPINA5, RYBP, SLC38A2, FEM1B, and PYDC1. Further histologic and biochemical analyses suggested SERPINA5 expression is associated with tau expression in the brain. Our study highlights the importance of embracing heterogeneity of the human brain in disease to identify disease-relevant gene expression.


Subject(s)
Alzheimer Disease/genetics , Cerebral Cortex/metabolism , Gene Expression Profiling/methods , Hippocampus/metabolism , Aged , Aged, 80 and over , Alzheimer Disease/diagnosis , Autopsy , Cerebral Cortex/pathology , Female , Hippocampus/pathology , Humans , Machine Learning , Male , Neurofibrillary Tangles/genetics , Neurofibrillary Tangles/metabolism , Protein C Inhibitor/genetics , Protein C Inhibitor/metabolism , RNA-Seq/methods , tau Proteins/genetics , tau Proteins/metabolism
5.
Exp Cell Res ; 391(1): 111987, 2020 06 01.
Article in English | MEDLINE | ID: mdl-32240661

ABSTRACT

BACKGROUND: The protein plasminogen activator inhibitor-1 (PAI-1), an inhibitor specific for urokinase plasminogen activator (uPA) and tissue plasminogen activator (tPA), has been shown to have a key role in cancer metastases. Currently, it is unknown as to whether the exocellular inhibition of PAI-1 can inhibit the migration of cancer cells. METHODS: By fusing the mutated serine protease domain (SPD) of uPA and human serum albumin (HSA), PAItrap3, a protein that traps PAI-1, was synthesized and experiments were conducted to determine if exocellular PAItrap3 attenuates PAI-1-induced cancer cell migration in vitro. RESULTS: PAItrap3 (0.8 µM) significantly inhibited the motility of MCF-7, MDA-MB-231, HeLa and 4T1 cancer cells, by 90%, 50%, 30% and 20%, respectively, without significantly altering their proliferation. The PAI-1-induced rearrangement of F-actin was significantly inhibited by PAItrap3, which produced a decrease in the number of cell protrusions by at least 20%. CONCLUSIONS: In vitro, PAItrap3 inhibited PAI-1-induced cancer cell migration, mainly through inhibiting the rearrangement of F-actin. Overall, these results, provided they can be extrapolated to humans, suggest that the PAItrap3 protein could be used as an exocellular inhibitor to attenuate cancer metastases.


Subject(s)
Actins/genetics , Cell Movement/drug effects , Plasminogen Activator Inhibitor 1/pharmacology , Protein C Inhibitor/pharmacology , Actins/antagonists & inhibitors , Actins/metabolism , Binding Sites , Cell Line , Cell Movement/genetics , Cell Proliferation/drug effects , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , HeLa Cells , Hepatocytes/cytology , Hepatocytes/drug effects , Hepatocytes/metabolism , Histidine/genetics , Histidine/metabolism , Humans , MCF-7 Cells , Oligopeptides/genetics , Oligopeptides/metabolism , Pichia/genetics , Pichia/metabolism , Plasminogen Activator Inhibitor 1/chemistry , Plasminogen Activator Inhibitor 1/genetics , Plasminogen Activator Inhibitor 1/metabolism , Protein Binding , Protein C Inhibitor/chemistry , Protein C Inhibitor/genetics , Protein C Inhibitor/metabolism , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism
6.
Int Urogynecol J ; 31(1): 117-122, 2020 01.
Article in English | MEDLINE | ID: mdl-30715578

ABSTRACT

INTRODUCTION AND HYPOTHESIS: Previous studies have indicated a hereditary component of stress urinary incontinence; however, evidence on candidate genes or single-nucleotide polymorphisms (SNPs) is scarce. We hypothesize a genetic association of female stress urinary incontinence based on significant differences of the urinary and serum proteomic pattern in the identical study population. METHODS: Case-control study of 19 patients and 19 controls. We searched for known SNPs of SUI candidate genes (COL1A1, MMP1, SERPINA5, UMOD) in the database of short genetic variations and PubMed. Genomic DNA was isolated using QIAamp DNA Blood Midi Kit (Qiagen). We performed Sanger sequencing of selected exons and introns. RESULTS: The rs885786 SNP of the SERPINA5 gene was identified in 15 cases and 10 controls (p = 0.09). The rs6113 SNP of the SERPINA5 gene was present in 4 controls compared to 0 cases (p = 0.105). The rs4293393, rs13333226 and rs13335818 SNPs of the UMOD gene were identified in five cases and two controls (p = 0.20), the rs1800012 SNP of the COL1A1 gene in five cases versus four controls (p = 0.24) and the homozygous rs1799750 SNP of the MMP1 gene in eight cases versus five controls (p = 0.18). The combination of the rs885786 SNP of the SERPINA5 gene and rs179970 SNP of the MMP1 gene was detected in ten cases versus five controls (p = 0.072). CONCLUSIONS: We found nonsignificant trends toward associations of SNPs on the SERPINA5, UMOD and MMP1 gene and SUI.


Subject(s)
Matrix Metalloproteinase 1/genetics , Protein C Inhibitor/genetics , Proteome , Urinary Incontinence, Stress/genetics , Adult , Case-Control Studies , Female , Humans , Middle Aged , Polymorphism, Single Nucleotide , Urinary Incontinence, Stress/blood , Urinary Incontinence, Stress/urine
7.
Anticancer Res ; 37(12): 6609-6618, 2017 12.
Article in English | MEDLINE | ID: mdl-29187436

ABSTRACT

BACKGROUND/AIM: To date there has been no investigation into the epigenetic regulation of the serine protease inhibitor SERPINA5 in prostate cancer, where lack of this gene was considered to facilitate invasive growth patterns. MATERIALS AND METHODS: Methylation degrees of eight CpG sites of SERPINA5 were analyzed in normal and malignant prostate cells using nucleotide sequencing, methylation-specific high resolution melting and digital droplet PCR techniques. RESULTS: The methylation degree of five CpG sites significantly correlated with lower SERPINA5 expression levels. In contrast, two CpG sites (at -19 bp and -14 bp from the transcription start site) were hypermethylated in normal epithelial prostate cells, benign hyperplasic cells and low-invasive malignant LNCaP cells, whereas in aggressive DU-145 and PC-3 cell lines, these sites were essentially unmethylated. CONCLUSION: Novel methylation patterns of two distinct CpG sites of the SERPINA5 promoter may be useful for differentiating benign from malignant prostate disease.


Subject(s)
CpG Islands/genetics , DNA Methylation , Promoter Regions, Genetic/genetics , Protein C Inhibitor/genetics , Binding Sites/genetics , Cell Line, Tumor , Cells, Cultured , Epithelial Cells/metabolism , Gene Expression Regulation, Neoplastic , Humans , MCF-7 Cells , Male , Prostate/cytology , Prostate/metabolism , Prostatic Hyperplasia/genetics , Prostatic Hyperplasia/pathology , Prostatic Neoplasms/genetics , Prostatic Neoplasms/pathology
8.
Crit Care ; 21(1): 47, 2017 Mar 08.
Article in English | MEDLINE | ID: mdl-28270177

ABSTRACT

BACKGROUND: Acute kidney injury (AKI) is a multifactorial syndrome, but knowledge about its pathophysiology and possible genetic background is limited. Recently the first hypothesis-free genetic association studies have been published to explore individual susceptibility to AKI. We aimed to replicate the previously identified associations between five candidate single nucleotide polymorphisms (SNP) in apoptosis-related genes BCL2, SERPINA4, SERPINA5, and SIK3 and the development of AKI, using a prospective cohort of critically ill patients with sepsis/septic shock, in Finland. METHODS: This is a prospective, observational multicenter study. Of 2567 patients without chronic kidney disease and with genetic samples included in the Finnish Acute Kidney Injury (FINNAKI) study, 837 patients had sepsis and 627 patients had septic shock. AKI was defined according to the Kidney Disease: Improving Global Outcomes (KDIGO) criteria, considering stages 2 and 3 affected (severe AKI), stage 0 unaffected, and stage 1 indecisive. Genotyping was done using iPLEXTM Assay (Agena Bioscience). The genotyped SNPs were rs8094315 and rs12457893 in the intron of the BCL2 gene, rs2093266 in the SERPINA4 gene, rs1955656 in the SERPINA5 gene and rs625145 in the SIK3 gene. Association analyses were performed using logistic regression with PLINK software. RESULTS: We found no significant associations between the SNPs and severe AKI in patients with sepsis/septic shock, even after adjustment for confounders. Among patients with septic shock (252 with severe AKI and 226 without AKI (149 with KDIGO stage 1 excluded)), the SNPs rs2093266 and rs1955656 were significantly (odds ratio 0.63, p = 0.04276) associated with stage 2-3 AKI after adjusting for clinical and demographic variables. CONCLUSIONS: The SNPs rs2093266 in the SERPINA4 and rs1955656 in the SERPINA5 were associated with the development of severe AKI (KDIGO stage 2-3) in critically ill patients with septic shock. For the other SNPs, we did not confirm the previously reported associations.


Subject(s)
Acute Kidney Injury/genetics , Protein C Inhibitor/genetics , Serpins/genetics , Shock, Septic/complications , Acute Kidney Injury/diagnosis , Acute Kidney Injury/physiopathology , Aged , Critical Illness/epidemiology , Female , Finland , Genetic Variation/physiology , Humans , Intensive Care Units/organization & administration , Logistic Models , Male , Middle Aged , Odds Ratio , Prospective Studies , Protein Kinases/genetics , Proto-Oncogene Proteins c-bcl-2/genetics , Retrospective Studies , Shock, Septic/physiopathology
9.
Carcinogenesis ; 37(7): 677-684, 2016 07.
Article in English | MEDLINE | ID: mdl-27207655

ABSTRACT

Several single-nucleotide polymorphisms (SNPs) have been associated with papillary and follicular thyroid cancer (PTC and FTC, respectively) risk, but few have replicated. After analyzing 17525 tag SNPs in 1129 candidate genes, we found associations with PTC risk in SERPINA5, FTO, HEMGN (near FOXE1) and other genes. Here, we report results from a replication effort in a large independent PTC/FTC case-control study conducted in Germany. We evaluated the best tagging SNPs from our previous PTC study and additionally included SNPs in or near FOXE1 and NKX2-1 genes, known susceptibility loci for thyroid cancer. We genotyped 422 PTC and 130 FTC cases and 752 controls recruited from three German clinical centers. We used polytomous logistic regression to simultaneously estimate PTC and FTC associations for 79 SNPs based on log-additive models. We assessed effect modification by body mass index (BMI), gender and age for all SNPs, and selected SNP by SNP interactions. We confirmed associations with PTC and SNPs in FOXE1/HEMGN, SERPINA5 (rs2069974), FTO (rs8047395), EVPL (rs2071194), TICAM1 (rs8120) and SCARB1 (rs11057820) genes. We found associations with SNPs in FOXE1, SERPINA5, FTO, TICAM1 and HSPA6 and FTC. We found two significant interactions between FTO (rs8047395) and BMI (P = 0.0321) and between TICAM1 (rs8120) and FOXE1 (rs10984377) (P = 0.0006). Besides the known associations with FOXE1 SNPs, we confirmed additional PTC SNP associations reported previously. We also found several new associations with FTC risk and noteworthy interactions. We conclude that multiple variants and host factors might interact in complex ways to increase risk of PTC and FTC.


Subject(s)
Adaptor Proteins, Vesicular Transport/genetics , Adenocarcinoma, Follicular/genetics , Alpha-Ketoglutarate-Dependent Dioxygenase FTO/genetics , Carcinoma/genetics , Forkhead Transcription Factors/genetics , Protein C Inhibitor/genetics , Scavenger Receptors, Class B/genetics , Thyroid Neoplasms/genetics , Adenocarcinoma, Follicular/pathology , Adult , Aged , Carcinoma/pathology , Carcinoma, Papillary , Female , Genetic Association Studies , Genetic Predisposition to Disease , Genotype , Germany , Humans , Male , Middle Aged , Polymorphism, Single Nucleotide , Risk Factors , Thyroid Cancer, Papillary , Thyroid Neoplasms/pathology
10.
J Mol Neurosci ; 57(1): 48-62, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25982926

ABSTRACT

Neuroinflammation is thought to contribute to cell death in neurodegenerative disorders, but the factors involved in the inflammatory process are not completely understood. Proteinase-activated receptor-2 (PAR2) expression in brain is increased in Alzheimer's disease and multiple sclerosis, but the status of PAR2 in Parkinson's disease is unknown. This study examined expression of PAR2 and endogenous proteinase activators (trypsin-2, mast cell tryptase) and proteinase inhibitors (serpin-A5, serpin-A13) in areas vulnerable and resistant to neurodegeneration in Parkinson's disease at different Braak α-synuclein stages of the disease in post-mortem brain. In normal aged brain, expression of PAR-2, trypsin-2, and serpin-A5 and serpin-A13 was found in neurons and microglia, and alterations in the amount of immunoreactivity for these proteins were found in some brain regions. Namely, there was a decrease in neurons positive for serpin-A5 in the dorsal motor nucleus, and serpin-A13 expression was reduced in the locus coeruleus and primary motor cortex, while expression of PAR2, trypsin-2 and both serpins was reduced in neurons within the substantia nigra. There was an increased number of microglia that expressed serpin-A5 in the dorsal motor nucleus of vagus and elevated numbers of microglia that expressed serpin-A13 in the substantia nigra of late Parkinson's disease cases. The number of microglia that expressed trypsin-2 increased in primary motor cortex of incidental Lewy body disease cases. Analysis of Parkinson's disease cases alone indicated that serpin-A5 and serpin-A13, and trypsin-2 expression in midbrain and cerebral cortex was different in cases with a high incidence of L-DOPA-induced dyskinesia and psychosis compared to those with low levels of these treatment-induced side effects. This study showed that there was altered expression in brain of PAR2 and some proteins that can control its function in Parkinson's disease. Given the role of PAR2 in neuroinflammation, drugs that mitigate these changes may be neuroprotective when administered to patients with Parkinson's disease.


Subject(s)
Parkinson Disease/metabolism , Protein C Inhibitor/metabolism , Receptor, PAR-2/metabolism , Serpins/metabolism , Trypsin/metabolism , Trypsinogen/metabolism , Aged , Aged, 80 and over , Brain/cytology , Brain/metabolism , Case-Control Studies , Female , Humans , Male , Microglia/metabolism , Middle Aged , Neurons/metabolism , Organ Specificity , Protein C Inhibitor/genetics , Receptor, PAR-2/genetics , Serpins/genetics , Trypsin/genetics , Trypsinogen/genetics
11.
Virology ; 458-459: 11-21, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24928035

ABSTRACT

HIV-exposed seronegative individuals (HESNs) are persons who remain seronegative despite repeated exposure to HIV, suggesting an in vivo resistance mechanism to HIV. Elucidation of endogenous factors responsible for this phenomenon may aid in the development of new classes of microbicides and therapeutics. We compared cervicovaginal protein abundance profiles between high-risk HESN and two control groups: low-risk HESN and HIV-positives. Four iTRAQ-based quantitative experiments were performed using samples classified based on presence/absence of particular gynaecological conditions. After statistical analysis, two proteins were shown to be differentially abundant between high-risk HESNs and control groups. Serpin A5, a serine proteinase inhibitor and Myeloblastin, a serine protease, were up- and downregulated, respectively. Commercially available ELISA assays were used to confirm differential Serpin A5 levels. These results suggest that HIV resistance in CVF of HESNs is the result of a delicate balance between two complementary mechanisms: downregulation of serine proteinases and upregulation of their inhibitors.


Subject(s)
Body Fluids/enzymology , HIV Infections/immunology , HIV-1/physiology , Protein C Inhibitor/metabolism , Serine Proteases/metabolism , Cote d'Ivoire/epidemiology , Female , Gene Expression Regulation, Enzymologic/immunology , Genetic Predisposition to Disease , HIV Infections/epidemiology , HIV Infections/virology , Humans , Protein C Inhibitor/chemistry , Protein C Inhibitor/genetics , Serine Endopeptidases/genetics , Serine Endopeptidases/metabolism , Serine Proteases/genetics , Sex Workers
12.
Mol Oncol ; 8(2): 366-77, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24388360

ABSTRACT

In our previous study, we identified 1241 loci with somatic copy number alterations in human hepatocellular carcinoma (HCC) using Affymetrix SNP 6.0 arrays, and a putative cancer gene SERPINA5 was uncovered in a novel chromosomal region with recurrent copy number loss at 14q31.1-32.13. The SERPINA5 was reported to be deregulated in renal, breast, prostate and ovarian cancers. However, the roles of SERPINA5 in cancer remain greatly elusive. In this study, we found that the DNA dosage and expression level of the SERPINA5 gene were significantly decreased in HCC by quantitative real-time PCR. Notably, the expression levels of SERPINA5 negatively correlated with malignant progression of HCC. The SERPINA5 gene was further observed to reduce in vitro and in vivo metastatic potential of HCC cells. Moreover, secreted SERPINA5 protein also could inhibit the metastatic ability of HCC cells. Finally, we discovered that one of the mechanisms explaining SERPINA5 inhibition of HCC metastasis is through direct interaction with fibronectin and disruption of the fibronectin-integrin signaling pathway. These findings highlight an important role of SERPINA5 in the regulation of migratory and metastatic potentials of HCC and suggest a potential application of SERPINA5 in cancer treatment.


Subject(s)
Carcinoma, Hepatocellular/metabolism , Integrin beta1/metabolism , Liver Neoplasms/metabolism , Neoplasm Proteins/metabolism , Protein C Inhibitor/metabolism , Signal Transduction , Carcinoma, Hepatocellular/genetics , Carcinoma, Hepatocellular/pathology , Cell Line, Tumor , Fibronectins/genetics , Fibronectins/metabolism , Gene Expression Regulation, Neoplastic/genetics , Humans , Integrin beta1/genetics , Liver Neoplasms/genetics , Liver Neoplasms/pathology , Neoplasm Proteins/genetics , Protein C Inhibitor/genetics
13.
Anticancer Res ; 33(11): 4833-9, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24222120

ABSTRACT

BACKGROUND: The purpose of this study was to identify the DNA methylation status of the mitogen-activated protein kinase (MAPK) signal-inhibiting genes dual-specificity phosphatase 4 (DUSP4) and 6 (DUSP6); and serpin peptidase inhibitor A member 5 (SERPINA5) in thyroid cancer. MATERIALS AND METHODS: Using 76 papillary thyroid cancer(PTC) tissues and three thyroid cancer cell lines (TPC1, WRO82-1 and XTC), the expression of three genes and DNA methylation were determined by reverse transcription-PCR and methylation-specific PCR. RESULTS: In all cell lines, the expression of DUSP4 and DUSP6 increased; the corresponding gene promoters were unmethylated. However, SERPINA5 gene expression decreased and SERPINA5 DNA was methylated in the TPC1 cell line. With the de-methylating agent 5'-aza-2'-deoxycytidine, SERPINA5 gene expression was restored. In 82.9% of PTC tissues (63/76), the SERPINA5 DNA promoter was methylated, which was associated with a higher v-raf murine sarcoma viral oncogene homolog B1(BRAF) mutation rate in PTC tissues based on multivariate regression (odds ratio=3.573; 95% confidence interval=1.122-11.379; p=0.031). CONCLUSION: The expression of the MAPK signal-inhibiting gene SERPINA5 decreased in the TPC1 cell line, SERPINA5 expression was regulated by DNA methylation, which was associated with a higher BRAF mutation rate in PTC.


Subject(s)
Carcinoma, Papillary/genetics , DNA Methylation , Dual Specificity Phosphatase 6/genetics , Dual-Specificity Phosphatases/genetics , Gene Expression Regulation, Neoplastic , Mitogen-Activated Protein Kinase Phosphatases/genetics , Mitogen-Activated Protein Kinases/genetics , Protein C Inhibitor/genetics , Thyroid Neoplasms/genetics , Biomarkers, Tumor/genetics , Carcinoma, Papillary/pathology , Female , Follow-Up Studies , Humans , Male , Middle Aged , Mutation/genetics , Neoplasm Staging , Polymerase Chain Reaction , Prognosis , Promoter Regions, Genetic/genetics , Proto-Oncogene Proteins B-raf/genetics , Thyroid Gland/metabolism , Thyroid Neoplasms/pathology , Tumor Cells, Cultured
14.
Mol Biol Rep ; 40(9): 5465-8, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23670045

ABSTRACT

Protein C inhibitor is a heparin dependent serine protease inhibitor found in human plasma, urine and other body fluids. It was originally identified as an inhibitor of activated protein C. Stroke is an important cause of morbidity and mortality in the pediatric age group. In this study we analyzed the protein C inhibitor gene mutations in Turkish pediatric stroke patients. We found a missense mutation of G to A at nucleotide 6760 in exon 2, resulting in a transition serine to asparagine (p.Ser188Asp) and in a child and his father and also we found same alteration in exon 2 in an another pediatric stroke case following bone marrow transplantation.


Subject(s)
Evolution, Molecular , Protein C Inhibitor/genetics , Stroke/genetics , Base Sequence , Bone Marrow Transplantation , DNA Primers/genetics , Electrophoresis, Agar Gel , Humans , Molecular Sequence Data , Mutation, Missense/genetics , Pedigree , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Sequence Analysis, DNA , Turkey
15.
PLoS One ; 8(3): e57243, 2013.
Article in English | MEDLINE | ID: mdl-23520464

ABSTRACT

Accumulating evidence suggests that alterations in immune function may be important in the etiology of papillary thyroid cancer (PTC). To identify genetic markers in immune-related pathways, we evaluated 3,985 tag single nucleotide polymorphisms (SNPs) in 230 candidate gene regions (adhesion-extravasation-migration, arachidonic acid metabolism/eicosanoid signaling, complement and coagulation cascade, cytokine signaling, innate pathogen detection and antimicrobials, leukocyte signaling, TNF/NF-kB pathway or other) in a case-control study of 344 PTC cases and 452 controls. We used logistic regression models to estimate odds ratios (OR) and calculate one degree of freedom P values of linear trend (P(SNP-trend) ) for the association between genotype (common homozygous, heterozygous, variant homozygous) and risk of PTC. To correct for multiple comparisons, we applied the false discovery rate method (FDR). Gene region- and pathway-level associations (P(Region) and P(Pathway)) were assessed by combining individual P(SNP-trend) values using the adaptive rank truncated product method. Two SNPs (rs6115, rs6112) in the SERPINA5 gene were significantly associated with risk of PTC (P(SNP-FDR)/P(SNP-trend)= 0.02/6×10(-6) and P(SNP-FDR)/P(SNP-trend)= 0.04/2×10(-5), respectively). These associations were independent of a history of autoimmune thyroiditis (OR = 6.4; 95% confidence interval: 3.0-13.4). At the gene region level, SERPINA5 was suggestively associated with risk of PTC (P(Region-FDR)/P(Region)= 0.07/0.0003). Overall, the complement and coagulation cascade pathway was the most significant pathway (P(Pathway)= 0.02) associated with PTC risk largely due to the strong effect of SERPINA5. Our results require replication but suggest that the SERPINA5 gene, which codes for the protein C inhibitor involved in many biological processes including inflammation, may be a new susceptibility locus for PTC.


Subject(s)
Carcinoma/genetics , Genetic Loci , Genetic Predisposition to Disease , Polymorphism, Single Nucleotide , Protein C Inhibitor/genetics , Thyroid Neoplasms/genetics , Adult , Aged , Autoimmune Diseases/genetics , Autoimmune Diseases/metabolism , Blood Coagulation/genetics , Carcinoma/metabolism , Carcinoma/pathology , Carcinoma, Papillary , Female , Humans , Male , Middle Aged , Protein C Inhibitor/metabolism , Risk Factors , Thyroid Cancer, Papillary , Thyroid Neoplasms/metabolism , Thyroid Neoplasms/pathology
16.
J Biol Chem ; 287(19): 15739-48, 2012 May 04.
Article in English | MEDLINE | ID: mdl-22416129

ABSTRACT

The activation of coagulation factors V and X by Russell's viper venom (RVV) has been implicated in the development of consumptive coagulopathies in severely envenomed patients. However, factor Va is prone to inactivation by activated protein C (APC), an important serine protease that negatively regulates blood coagulation. It is therefore hypothesized that APC may be down-regulated by some of the venom components. In this study, we managed to isolate a potent Kunitz-type APC inhibitor, named DrKIn-I. Using chromogenic substrate, DrKIn-I dose-dependently inhibited the activity of APC. Heparin potentiated the inhibition and reduced the IC(50) of DrKIn-I by 25-fold. DrKIn-I, together with heparin, also protected factor Va from APC-mediated inactivation. Using surface plasmon resonance, DrKIn-I exhibited fast binding kinetics with APC (association rate constant = 1.7 × 10(7) M(-1) s(-1)). Direct binding assays and kinetic studies revealed that this inhibition (K(i) = 53 pM) is due to the tight binding interactions of DrKIn-I with both heparin and APC. DrKIn-I also effectively reversed the anticoagulant activity of APC and completely restored the thrombin generation in APC-containing plasma. Furthermore, although the injection of either DrKIn-I or RVV-X (the venom factor X-activator) into ICR mice did not significantly deplete the plasma fibrinogen concentration, co-administration of DrKIn-I with RVV-X resulted in complete fibrinogen consumption and the deposition of fibrin thrombi in the glomerular capillaries. Our results provide new insights into the pathogenesis of RVV-induced coagulopathies and indicate that DrKIn-I is a novel APC inhibitor that is associated with potentially fatal thrombotic complications in Russell's viper envenomation.


Subject(s)
Daboia/metabolism , Disseminated Intravascular Coagulation/metabolism , Heparin/pharmacology , Protein C Inhibitor/pharmacology , Protein C/antagonists & inhibitors , Amino Acid Sequence , Animals , Blood Coagulation/drug effects , Carrier Proteins/genetics , Carrier Proteins/metabolism , Carrier Proteins/pharmacology , Cloning, Molecular , DNA, Complementary/chemistry , DNA, Complementary/genetics , Disseminated Intravascular Coagulation/chemically induced , Drug Synergism , Humans , Kinetics , Mice , Mice, Inbred ICR , Molecular Sequence Data , Protein Binding , Protein C/metabolism , Protein C Inhibitor/genetics , Protein C Inhibitor/metabolism , Daboia/genetics , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Viper Venoms/genetics , Viper Venoms/metabolism , Viper Venoms/pharmacology , Viper Venoms/poisoning
17.
J Mol Histol ; 41(1): 27-37, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20229239

ABSTRACT

Proteolysis of extracellular matrix is an important requirement for embryonic development and is instrumental in processes such as morphogenesis, angiogenesis, and cell migration. Efficient remodeling requires controlled spatio-temporal expression of both the proteases and their inhibitors. Protein C inhibitor (PCI) effectively blocks a range of serine proteases, and recently has been suggested to play a role in cell differentiation and angiogenesis. In this study, we mapped the expression pattern of PCI throughout mouse development using in situ hybridization and immunohistochemistry. We detected a wide-spread, yet distinct expression pattern with prominent PCI levels in skin including vibrissae, and in fore- and hindgut. Further sites of PCI expression were choroid plexus of brain ventricles, heart, skeletal muscles, urogenital tract, and cartilages. A strong and stage-dependent PCI expression was observed in the developing lung. In the pseudoglandular stage, PCI expression was present in distal branching tubules whereas proximal tubules did not express PCI. Later in development, in the saccular stage, PCI expression was restricted to distal bronchioli whereas sacculi did not express PCI. PCI expression declined in postnatal stages and was not detected in adult lungs. In general, embryonic PCI expression indicates multifunctional roles of PCI during mouse development. The expression pattern of PCI during lung development suggests its possible involvement in lung morphogenesis and angiogenesis.


Subject(s)
Embryonic Development , Gene Expression Regulation, Developmental , Protein C Inhibitor/genetics , Protein C Inhibitor/metabolism , Animals , Animals, Newborn , Embryo, Mammalian/cytology , Embryo, Mammalian/metabolism , Embryonic Development/genetics , Fetus/cytology , Fetus/metabolism , Immunohistochemistry , In Situ Hybridization , Mice , Organ Specificity
18.
Strahlenther Onkol ; 186(2): 91-98, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20127226

ABSTRACT

PURPOSE: To unravel biological mechanisms potentially resulting in the obliteration process after radiosurgery (RS) of human cerebral arteriovenous malformations (AVMs) by investigating molecular signatures on the transcriptomic level in peripheral blood of patients. PATIENTS AND METHODS: Venous blood samples were obtained at definite points of time before and after RS. The samples were tested for radiation-induced changes regarding biological markers (mRNA) using cDNA and oligo-microarray technology. The corresponding expression profiles were correlated with clinical data and obliteration signs in radiologic imaging. RESULTS: The proof of principle that RS outcome can be successfully correlated with transcriptomics of cellular blood components as disease parameter was demonstrated. The authors identified 76 differentially regulated genes (p < 0.001) after RS. Interestingly, in particular genes with known roles in anti-angiogenic and pro-coagulative pathways were identified as potentially relevant. In particularly, the authors found a significant downregulation of neuropilin-2, protein C inhibitor and cyclin-dependent kinase 6. They also found that low pretreatment blood mRNA levels of TLR4 (toll-like receptor 4) and STAT3 (signal transducer and activator of transcription 3) correlated with fast obliteration of AVMs. CONCLUSION: The authors report on a novel technique for molecular biological analysis of blood from patients with cerebral AVM treated with RS. Differential regulation of genes in peripheral blood was successfully correlated with RS and time to obliteration of AVMs. The identified genes indicate a potential new methodology to monitor RS, which may result in an individualized therapy and optimized follow-up.


Subject(s)
Blood Proteins/genetics , Gene Expression Profiling , Intracranial Arteriovenous Malformations/genetics , Intracranial Arteriovenous Malformations/surgery , Radiosurgery , Adult , Aged , Cyclin-Dependent Kinase 6/genetics , Down-Regulation/genetics , Down-Regulation/radiation effects , Female , Humans , Male , Middle Aged , Neuropilin-2/genetics , Oligonucleotide Array Sequence Analysis , Prognosis , Protein C Inhibitor/genetics , RNA, Messenger/genetics , RNA, Messenger/radiation effects , STAT3 Transcription Factor/genetics , Toll-Like Receptor 4/genetics , Treatment Outcome , Young Adult
19.
Fertil Steril ; 93(1): 277-9, 2010 Jan.
Article in English | MEDLINE | ID: mdl-19765701

ABSTRACT

The aim of this study was to determine whether total fertilization failure in human IVF can be partially explained by alterations in the gene that codes for protein C inhibitor. Forty-six men had IVF total fertilization failure and 51 controls with normal fertilization were screened for mutations in the protein C inhibitor gene by direct sequencing. The main finding was that in men involved in total fertilization failure, a heterozygous adenosine/guanine (A/G) base combination in position 1389 (rs2069990) (exon 6) in the protein C inhibitor gene was significantly more common compared with controls (10.9% vs. 0).


Subject(s)
Fertilization in Vitro , Polymorphism, Single Nucleotide , Protein C Inhibitor/genetics , Adult , Case-Control Studies , Exons , Female , Gene Frequency , Heterozygote , Humans , Male , Phenotype , Pilot Projects , Treatment Failure
20.
J Thromb Haemost ; 6(12): 2017-26, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18983517

ABSTRACT

Protein C inhibitor (PCI) is a member of the serine protease inhibitor (serpin) family. PCI was initially found to be an inhibitor of activated protein C, and later shown to be a potent inhibitor of blood coagulation and fibrinolysis such as that mediated by urokinase type-plasminogen activator. Therefore, the protein came to be known as plasminogen activator inhibitor-3. It also inhibits proteases involved in fertilization. PCI is broadly conserved, and is found in human, rhesus monkey, cow, rabbit, rat, mouse and chicken. The human PCI gene is located on chromosome 14q32.1 in a cluster of genes encoding related serpins. Sp1- and AP2-binding sites in the 5'-flanking region act as promoter and enhancer, respectively, for its expression in the liver. PCI mRNA is expressed in many organs in primates, but only in the reproductive organs in rodents. Recent studies using transgenic mice expressing the human gene have suggested that PCI is also involved in regulation of lung remodeling, tissue regeneration, vascular permeability, proteolysis in the kidney and tumor cell invasion. A protease inhibitor-independent activity of PCI, the prevention of anti-angiogenesis and metastasis of tumor cells, has also been observed. Thus, PCI is a unique multi-functional serpin playing diverse roles in the thrombosis and hemostasis in multiple organs and tissues of a variety of species.


Subject(s)
Hemostasis , Protein C Inhibitor/physiology , Thrombosis , Animals , Capillary Permeability , Fertilization , Humans , Neoplasm Invasiveness , Protein C Inhibitor/genetics , Regeneration , Serine Proteinase Inhibitors
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