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1.
Sci Rep ; 14(1): 13616, 2024 06 13.
Article in English | MEDLINE | ID: mdl-38871988

ABSTRACT

Due to the high solubility of Cd in water, it is considered a potential toxin which can cause cancer in humans. In plants, it is associated with the development of oxidative stress due to the generation of reactive oxygen species. To overcome this issue, the roles of different plant hormones are vital. Strigolactones, one of such natural plant hormones, show promise in alleviating cadmium toxicity by mitigating its harmful effects. Acidified biochar (AB) can also effectively mitigate cadmium toxicity via ion adsorption and pH buffering. However, the combined effects of strigolactone and AB still need in-depth investigations in the context of existing literature. This study aimed to assess the individual and combined impacts of SLs (0 and 25 µM) and AB (0 and 0.75% w/w) on radish growth under Cd toxicity, i.e., 0 and 20 mg Cd/kg soil. Using a fully randomized design (CRD), each treatment was administered in four replicates. In comparison to the control under 20 mg Cd/kg soil contamination, the results showed that 25 µM strigolactone + 0.75% AB significantly improved the following: radish shoot length (~ 17%), root length (~ 47%), plant fresh weight (~ 28%), plant dry weight (~ 96%), chlorophyll a (~ 43%), chlorophyll b (~ 31%), and total chlorophyll (~ 37%). It was also noted that 0.75% AB was more pronounced in decreasing antioxidant activities than 25 µM strigolactone under 20 mg Cd/ kg soil toxicity. However, performing 25 µM strigolactone + 0.75% AB was far better than the sole application of 25 µM strigolactone and 0.75% AB in decreasing antioxidant activities in radish plants. In conclusion, by regulating antioxidant activities, 25 µM strigolactone + 0.75% AB can increase radish growth in cadmium-contaminated soils.


Subject(s)
Charcoal , Lactones , Raphanus , Soil Pollutants , Raphanus/drug effects , Raphanus/growth & development , Raphanus/metabolism , Lactones/pharmacology , Lactones/metabolism , Soil Pollutants/toxicity , Charcoal/chemistry , Cadmium/toxicity , Antioxidants/metabolism , Antioxidants/pharmacology , Metals, Heavy/toxicity , Oxidative Stress/drug effects , Chlorophyll/metabolism , Plant Roots/drug effects , Plant Roots/growth & development , Plant Roots/metabolism , Plant Growth Regulators/pharmacology , Heterocyclic Compounds, 3-Ring
2.
Chemosphere ; 360: 142385, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38777201

ABSTRACT

Heavy metal contamination poses a significant threat to soil quality, plant growth, and food safety, and directly affects multiple UN SDGs. Addressing this issue and offering a remediation solution are vital for human health. One effective approach for immobilizing heavy metals involves impregnating cypress chips with calcium hydroxide (Ca(OH)2) to enhance the chemical adsorption capacity of the resulting woody charcoal. In the present study, un-treated cypress biochar (UCBC) and calcium-treated cypress biochar (TCBC), were introduced into pristine and contaminated soil, at rates of 3, 6, and 9% (w/w). Both BCs were alkaline (UCBC pH: 8.9, TCBC pH: 9.7) with high specific surface area, which improved the soil properties (pH, EC, and OM). Radish (Raphanus sativus) cultivated in pots revealed that both UCBC and TCBC demonstrated significant improvements in growth attributes and heavy metal immobilization compared to the control, with TCBC exhibiting superior effects. The TCBC surface showed highly active nanosized precipitated calcium carbonate particles that were active in immobilizing heavy metals. The application of TCBC at a rate of 9% resulted in a substantial reduction in Zn and Cu uptake by radish roots and shoots. In contaminated soil, Zn uptake by radish roots decreased by 55% (68.3-31.0 mg kg-1), and shoots by 37% (49.3-31.0 mg kg-1); Cu uptake decreased by 40% (38.6-23.2 mg kg-1) in roots and 39% (58.2-35.2 mg kg-1) in shoots. Uptake of Pb was undetectable after TCBC application. Principal component analysis (PCA) highlighted the potential of TCBC over UCBC in reducing heavy metal concentrations and promoting radish growth. Future research should consider the long-term effects and microbial interactions of TCBC application.


Subject(s)
Calcium Hydroxide , Charcoal , Metals, Heavy , Raphanus , Soil Pollutants , Soil , Raphanus/growth & development , Raphanus/drug effects , Charcoal/chemistry , Soil/chemistry , Calcium Hydroxide/chemistry , Cupressus , Environmental Restoration and Remediation/methods , Adsorption , Plant Roots/growth & development , Plant Roots/metabolism
3.
Food Chem ; 451: 139464, 2024 Sep 01.
Article in English | MEDLINE | ID: mdl-38704990

ABSTRACT

Silver-metal organic framework (Ag@MOF) has exhibited outstanding antimicrobial activity in antimicrobial applications, and reducing the biotoxicity associated with silver has become a research priority. In this study, Ag@MOF was initially modified with sodium alginate (SA) to form SA-Ag@MOF. The results showed that SA could control the release of Ag+, reducing the release by about 8% at 24 h, and the biotoxicity was significantly reduced. Finally, SA-Ag@MOF was applied as an antimicrobial agent in citric acid-modified PVA film to develop a novel composite antimicrobial film. When added at 2 MIC, the CA3-M2 film can effectively inhibit the growth of E. coli and S. aureus, and the inhibition rate has reached 98%. For white radish packaging applications, CA3-M2 film inhibited the growth of surface microorganisms, while ensuring moisture and tissue hardness to extend shelf-life up to 7 days. Overall, the strategy conceived here can be a theoretical basis for novel antimicrobial packaging.


Subject(s)
Alginates , Citric Acid , Escherichia coli , Food Packaging , Metal-Organic Frameworks , Silver , Staphylococcus aureus , Alginates/chemistry , Alginates/pharmacology , Food Packaging/instrumentation , Citric Acid/chemistry , Citric Acid/pharmacology , Silver/chemistry , Silver/pharmacology , Escherichia coli/drug effects , Escherichia coli/growth & development , Staphylococcus aureus/drug effects , Staphylococcus aureus/growth & development , Metal-Organic Frameworks/chemistry , Metal-Organic Frameworks/pharmacology , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/chemistry , Microbial Sensitivity Tests , Raphanus/chemistry , Raphanus/growth & development , Raphanus/drug effects , Anti-Infective Agents/pharmacology , Anti-Infective Agents/chemistry
4.
Braz J Biol ; 84: e281235, 2024.
Article in English | MEDLINE | ID: mdl-38656077

ABSTRACT

The increase in prices of fertilizers, energy and other materials necessary for the industry triggered a global economic crisis. Reason that was investigated on the biological and chemical characteristics in relation to the yield of radish nourished with humus from plant residue. The objective was to determine the appropriate dose of humus to obtain greater yield and its relationship with the chemical and biological characteristics of the radish. It is based on applied methodology with an experimental approach; Therefore, the Completely Random Block Design model was used, which consisted of 3 blocks and 5 treatments that were T1 with 0, T2 with 4, T3 with 6, T4 with 8 and T5 with 10 t/ha of humus and They applied 15 days after sowing. The physical characteristics of the radish were evaluated and processed using analysis of variance and Duncan. Concentration of elements in leaves and stomatal density were also analyzed. It was determined that T5 stood out in total plant length with 28.95 cm, plant weight with 76.87 g, equatorial diameter with 4,404 cm and commercial yield with 20,296 t/ha. Nitrogen consumption in relation to yield with 247.44 kg/ha. Stomatal density 459 stomata/mm2 and profitability with 150% and nutrient concentration in leaves highlighted T4 with N, K, Ca, Mg, Mo and Zn. It concludes that T5 stood out with 20,296 t/ha, which differed by 26.04% in relation to the control (T1) with 15,011 t/ha. Therefore, this dose added nutrients to the soil that improved the availability for plant absorption and this influenced the concentration of nutrients in leaves such as N, P and Fe and stomatal density with 459 stomata/mm2, which had a response in good development, strengthening against environmental stress and therefore greater performance.


Subject(s)
Fertilizers , Raphanus , Raphanus/chemistry , Raphanus/growth & development , Fertilizers/analysis , Humic Substances/analysis , Plant Leaves/chemistry , Nitrogen/analysis , Nitrogen/metabolism , Biomass
5.
Plant Physiol Biochem ; 210: 108563, 2024 May.
Article in English | MEDLINE | ID: mdl-38554535

ABSTRACT

The purpose of this study was to investigate the effects of root biomass during the later stage of growth on fatty acid composition and lipid peroxidation, and to clarify the physiological mechanisms by which these differences affect internal browning (IB) development in radish roots. Therefore, we controlled the enlargement of roots by changing the thinning period and generated plots composed of roots with different biomass in the latter half of growth. The earlier the radish seedlings were thinned, the more vigorous the root growth from an earlier stage was achieved. Earlier thinning caused IB from the early stage of root maturation, and IB severity progressed with subsequent age progression; however, IB damage did not occur when root size during the later growth stage was kept small by later thinning. Higher levels of hydrogen peroxide, peroxidase activity, NADPH-dependent reactive oxygen species (ROS) burst-related genes, and carbonyl compounds were detected in earlier-thinned large-sized roots compared to later-thinned small-sized ones. Compared with the latter small-sized roots, the former large-sized roots had a lower ratio of linoleic acid (18:2) and a higher ratio of α-linolenic acid (α-18:3). Furthermore, in earlier-thinned large-sized roots, higher levels of phospholipase- and/or lipoxygenase-related genes were detected compared to later-thinned small-sized ones. These facts suggest the possibility that root biomass in the later stage of growth affects the desaturation of membrane fatty acids, ROS concentration, and activity of fatty acid degrading enzymes, and controls the occurrence of IB injury through membrane oxidative degradation.


Subject(s)
Biomass , Plant Roots , Raphanus , Plant Roots/growth & development , Plant Roots/metabolism , Raphanus/growth & development , Raphanus/metabolism , Fatty Acids/metabolism , Lipid Peroxidation , Hydrogen Peroxide/metabolism , Reactive Oxygen Species/metabolism , Maillard Reaction , Linoleic Acid/metabolism , alpha-Linolenic Acid/metabolism
6.
Pest Manag Sci ; 80(7): 3470-3477, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38415813

ABSTRACT

BACKGROUND: This study introduces a wild radish population collected from Yelbeni in the Western Australian grainbelt that evolved an early silique abscission (shedding) trait to persist despite long-term harvest weed seed control (HWSC) use. In 2017, field-collected seed (known herein as Yelbeni) was compared to surrounding ruderal and field-collected populations in a fully randomized common garden study. RESULTS: The Yelbeni population exhibited a higher rate of silique abscission when compared to the ruderal populations collected from the site before wheat (Triticum aestivum L.) harvest (assessed at soft dough stage, Zadoks 83). A similar common garden study was conducted in the subsequent season (2018) using progeny reproduced on a single site without stress. The HWSC-selected progeny (Yelbeni P) shed 1048 (±288) siliques before wheat maturity at the soft dough stage (Zadoks 83) compared to 25 (±7) siliques from the pooled control populations. The Yelbeni P population only flowered 6 days earlier (FT50 as determined by log-logistic analysis) than pooled control populations, which is unlikely to fully account for the increased rate of silique abscission. The Yelbeni P population also located its lowest siliques below the lowest height for harvest interception (10 cm), which is likely to increase HWSC evasion. The mechanism inducing early silique-shedding is yet to be determined; however, wild radish is known for its significant genetic variability and has demonstrated its capacity to adapt to environmental and management stresses. CONCLUSION: This study demonstrates that the repeated use of HWSC can lead to the selection of HWSC-avoidance traits including early silique-shedding before harvest and/or locating siliques below the harvest cutting height for interception. © 2024 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.


Subject(s)
Phenotype , Raphanus , Seeds , Weed Control , Raphanus/growth & development , Raphanus/genetics , Raphanus/physiology , Western Australia , Seeds/growth & development , Weed Control/methods , Flowers/growth & development
7.
J Sci Food Agric ; 104(9): 5010-5020, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38314949

ABSTRACT

BACKGROUND: Cruciferous vegetable sprout has been highlighted as a promising functional material rich in bioactive compounds called isothiocyanates (ITCs) and it can be grown in very short periods in controlled indoor farms. However, because ITCs content depends on multiple factors such as cultivar, germination time and myrosinase activity, those variables need to be controlled during germination or extraction to produce functional materials enriched in ITCs. Sulforaphene (SFEN), an ITC found primarily in radishes (Raphanus sativus L.), exerts beneficial effects on obesity. However, the optimal germination and extraction conditions for radish sprout (RSP) to increase SFEN content remain unascertained, and the extract's anti-obesity effect has yet to be evaluated. RESULTS: The present study found that the SFEN content was highest in purple radish sprout (PRSP) among the six cultivars investigated. Optimal SFEN content occurred after 2 days of PRSP germination (2 days PRSP). To maximize the dry matter yield, total ITCs and SFEN contents in RSP extract, we found the optimal conditions for extracting PRSP [27.5 °C, 60 min, 1:75.52 solute/solvent (w/v), no ascorbic acid] using response surface methodology. Consistent with high SFEN content, 2 days PRSP extract significantly outperformed 3 days or 4 days PRSP extract in inhibiting lipid accumulation in 3T3-L1 cells. Moreover, 2 days PRSP extract suppressed adipogenesis and lipogenesis-related protein expression. CONCLUSION: Regarding the cultivar, germination time and extraction conditions, optimally produced PRSP extract contains high SFEN content and exerts anti-obesity effects. Thus, we suggest PRSP extract as a potent functional material for obesity prevention. © 2024 Society of Chemical Industry.


Subject(s)
Germination , Isothiocyanates , Plant Extracts , Raphanus , Raphanus/chemistry , Raphanus/growth & development , Raphanus/metabolism , Germination/drug effects , Plant Extracts/chemistry , Plant Extracts/isolation & purification , Plant Extracts/pharmacology , Isothiocyanates/pharmacology , Isothiocyanates/isolation & purification , Isothiocyanates/chemistry , Isothiocyanates/analysis , Mice , Animals , 3T3-L1 Cells , Sulfoxides
8.
Gene ; 815: 146180, 2022 Mar 20.
Article in English | MEDLINE | ID: mdl-34990794

ABSTRACT

Histone, a predominant protein component of chromatin, participates in DNA packaging and transcriptional regulation. However, the available information of Histone gene family is limited in radish. In this study, a total of 42 Histone gene family members were identified from the radish genome. Sequence alignment and phylogenetic analyses classified the Histone family into three groups (H2A, H2B and H3). Motif analysis showed that the functions of some motifs shared by H3 subfamily genes were related to chromosome regulation and cell development activities, such as motif 5 containing Cks1 and PPR region. Analysis of intron/exon structure indicated that RsCENH3 (RsHistone 18) has the characteristics of variant Histone. Furthermore, several motifs, including the LTR, G-box and TC-elements, were found in the promoters of RsHistone genes, which involved in cell development or various abiotic stresses responses. Transcriptome analysis indicated that the RsHistone genes exhibited higher expression level in floral buds than in roots and leaves. Subcellular localization showed that the RsCENH3 was localized on the nucleus, and it was highly expressed in the floral bud of 3.0-4.0 mm in radish. These findings would provide valuable information for characterization and potential utilization of Histone genes, and facilitate the efficient induction of double haploid plants in radish.


Subject(s)
Gene Expression Regulation, Plant , Histones/genetics , Plant Proteins/genetics , Raphanus/genetics , Chromosomes, Plant , Evolution, Molecular , Flowers/genetics , Flowers/growth & development , Gene Ontology , Genome, Plant , Multigene Family , Phylogeny , Plant Proteins/metabolism , Raphanus/growth & development , Stress, Physiological/genetics
9.
Molecules ; 26(22)2021 Nov 16.
Article in English | MEDLINE | ID: mdl-34834009

ABSTRACT

The aim of this study was to propose a complete approach for macroalgae biomass valorization into products useful for sustainable agriculture and environmental protection. In the first stage, the effects of macroalgal extracts and ZnO NPs (zinc oxide nanoparticles) on the germination and growth of radish were examined. Macroalgal extract was produced from freshwater macroalga, i.e., Cladophora glomerata by ultrasound assisted extraction (UAE). The extract was used to biosynthesize zinc oxide nanoparticles. In germination tests, extracts and solutions of ZnO NPs were applied on paper substrate before sowing. In the second stage, sorption properties of macroalga, post-extraction residue, and ZnO NPs to absorb Cr(III) ions were examined. In the germination tests, the highest values of hypocotyl length (the edible part of radish), i.e., 3.3 and 2.6 cm were obtained for 60 and 80% extract (among the tested concentrations 20, 40, 60, 80, and 100%) and 10 and 50 mg/L NPs, respectively. The highest sorption capacity of Cr(III) ions (344.8 mg/g) was obtained by both macroalga and post-extraction residue at a pH of 5 and initial Cr(III) ions concentration of 200 mg/L. This study proves that macroalgae and products based on them can be applied in both sustainable agriculture and wastewater treatment.


Subject(s)
Biomass , Chlorophyta/chemistry , Chromium , Hypocotyl/growth & development , Nanoparticles/chemistry , Plant Extracts/chemistry , Raphanus/growth & development , Seaweed/chemistry , Zinc Oxide , Chromium/chemistry , Chromium/metabolism , Ions/chemistry , Ions/metabolism , Zinc Oxide/chemistry , Zinc Oxide/pharmacology
10.
Proc Natl Acad Sci U S A ; 118(33)2021 08 17.
Article in English | MEDLINE | ID: mdl-34389664

ABSTRACT

As they develop, many plants deploy shifts in antiherbivore defense allocation due to changing costs and benefits of their defensive traits. Plant defenses are known to be primed or directly induced by herbivore damage within generations and across generations by long-lasting epigenetic mechanisms. However, little is known about the differences between life stages of epigenetically inducible defensive traits across generations. To help fill this knowledge gap, we conducted a multigenerational experiment to determine whether defense induction in wild radish plants was reflected in chromatin modifications (DNA methylation); we then examined differences between seedlings and reproductive plants in current and transgenerational plasticity in chemical (glucosinolates) and physical (trichomes) defenses in this species. Herbivory triggered genome methylation both in targeted plants and their offspring. Within one generation, both defenses were highly inducible at the seedling stage, but only chemical defenses were inducible in reproductive plants. Across generations, herbivory experienced by mother plants caused strong direct induction of physical defenses in their progeny, with effects lasting from seedling to reproductive stages. For chemical defenses, however, this transgenerational induction was evident only in adults. Transgenerational priming was observed in physical and chemical defenses, particularly in adult plants. Our results show that transgenerational plasticity in plant defenses in response to herbivore offense differs for physical and chemical defense and changes across plant life stages.


Subject(s)
Adaptation, Physiological/genetics , Herbivory/physiology , Lepidoptera/physiology , Raphanus/growth & development , Raphanus/genetics , Animals , DNA/genetics , DNA Methylation , Epigenesis, Genetic , Larva/physiology , Phenotype , Plant Leaves
11.
Methods Mol Biol ; 2288: 217-232, 2021.
Article in English | MEDLINE | ID: mdl-34270014

ABSTRACT

Here, we describe the first protocol of European radish (Raphanus sativus L. subsp. sativus convar. radicula) for obtaining doubled haploid plants through in vitro microspore culture, in which the full cycle of doubled haploid formation was successfully achieved. Using this protocol, a yield of up to eight embryoids per Petri dish can be obtained. Effectiveness of this protocol was confirmed for several genotypes of European radish.


Subject(s)
Plant Breeding/methods , Raphanus/growth & development , Raphanus/genetics , Crops, Agricultural/genetics , Crops, Agricultural/growth & development , Crops, Agricultural/physiology , Culture Media/chemistry , Diploidy , Fluorescent Dyes , Genotype , Haploidy , Homozygote , Indoles , Molecular Biology/methods , Ploidies , Pollen/genetics , Pollen/growth & development , Raphanus/physiology , Regeneration/genetics , Staining and Labeling , Tissue Culture Techniques
12.
Gene ; 795: 145782, 2021 Aug 30.
Article in English | MEDLINE | ID: mdl-34146634

ABSTRACT

Auxin/indole-3-acetic acid (Aux/IAA) genes encode short lived nuclear proteins that cooperated with auxin or auxin response factor (ARF), which are involved in plant growth and developmental processes. However, it's still ambiguous how the Aux/IAA genes regulate the process governing taproot thickening in radish. Herein, 65 Aux/IAA genes were identified from the radish genome. Gene duplication analysis showed that two pairs of tandem duplication and 17 (27%) segmental duplication events were identified among Aux/IAA family genes in radish. Transcriptomic analysis revealed that most of Aux/IAA genes (52/65) exhibited differential expression pattern in different root tissues, and six root-specific genes were highly expressed in root cortex, cambium, xylem, and root tip in radish. RT-qPCR analysis showed that the expression level of RsIAA33 was the highest at cortex splitting stage (CSS), and early expanding stage (ES). Furthermore, amiRNA-mediated gene silencing of RsIAA33 indicated that it could inhibit the reproductive growth, thus promoting taproot thickening and development. These results would provide valuable information for elucidating the molecular function of Aux/IAA genes involved in taproot thickening in radish.


Subject(s)
Gene Expression Regulation, Plant , Genes, Plant , Indoleacetic Acids/immunology , Plant Roots/growth & development , Plant Roots/genetics , Raphanus/growth & development , Raphanus/genetics , Gene Duplication , Gene Expression Profiling , Indoleacetic Acids/metabolism , Multigene Family , Real-Time Polymerase Chain Reaction
13.
Food Microbiol ; 99: 103805, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34119098

ABSTRACT

This study was done to develop a method to inactivate Escherichia coli O157:H7 on radish and cabbage seeds using simultaneous treatments with gaseous chlorine dioxide (ClO2) and heat at high relative humidity (RH) without decreasing seeds' viability. Gaseous ClO2 was spontaneously vaporized from a solution containing hydrochloric acid (HCl, 1 N) and sodium chlorite (NaClO2, 100,000 ppm). Using a sealed container (1.8 L), an equation (y = 5687×, R2 = 0.9948) based on the amount of gaseous ClO2 generated from HCl-NaClO2 solution at 60 °C and 85% RH was developed. When radish or cabbage seeds were exposed to gaseous ClO2 at concentrations up to 3,000 ppm for 120 min, germination rates did not significantly decrease (P > 0.05). When seeds inoculated with E. coli O157:H7 were treated with 2,000 or 3,000 ppm of gaseous ClO2 in an atmosphere with 85% RH at 60 °C, populations (6.8-6.9 log CFU/g) on both types of seeds were decreased to below the detection limit for enrichment (-0.5 log CFU/g) within 90 min. This study provides useful information for developing a decontamination method to control E. coli O157:H7 and perhaps other foodborne pathogens on plant seeds by simultaneous treatment with gaseous ClO2 and heat at high RH.


Subject(s)
Brassica/growth & development , Chlorine Compounds/pharmacology , Decontamination/methods , Disinfectants/pharmacology , Escherichia coli O157/drug effects , Oxides/pharmacology , Raphanus/growth & development , Seeds/microbiology , Brassica/microbiology , Chlorine/pharmacology , Escherichia coli O157/growth & development , Germination/drug effects , Hot Temperature , Humidity , Microbial Viability/drug effects , Raphanus/microbiology , Seeds/chemistry , Seeds/growth & development
14.
PLoS One ; 16(5): e0252031, 2021.
Article in English | MEDLINE | ID: mdl-34043661

ABSTRACT

The flesh of the taproot of Raphanus sativus L. is rich in chlorophyll (Chl) throughout the developmental process, which is why the flesh is green. However, little is known about which genes are associated with Chl accumulation in this non-foliar, internal green tissue and whether the green flesh can perform photosynthesis. To determine these aspects, we measured the Chl content, examined Chl fluorescence, and carried out comparative transcriptome analyses of taproot flesh between green-fleshed "Cuishuai" and white-fleshed "Zhedachang" across five developmental stages. Numerous genes involved in the Chl metabolic pathway were identified. It was found that Chl accumulation in radish green flesh may be due to the low expression of Chl degradation genes and high expression of Chl biosynthesis genes, especially those associated with Part Ⅳ (from Protoporphyrin Ⅸ to Chl a). Bioinformatics analysis revealed that differentially expressed genes between "Cuishuai" and "Zhedachang" were significantly enriched in photosynthesis-related pathways, such as photosynthesis, antenna proteins, porphyrin and Chl metabolism, carbon fixation, and photorespiration. Twenty-five genes involved in the Calvin cycle were highly expressed in "Cuishuai". These findings suggested that photosynthesis occurred in the radish green flesh, which was also supported by the results of Chl fluorescence. Our study provides transcriptome data on radish taproots and provides new information on the formation and function of radish green flesh.


Subject(s)
Chlorophyll/analogs & derivatives , Gene Expression Regulation, Plant , Plant Proteins/genetics , Plant Roots/genetics , Raphanus/genetics , Transcriptome , Chlorophyll/biosynthesis , Computational Biology/methods , Gene Expression Profiling , Gene Expression Regulation, Developmental , Metabolic Networks and Pathways/genetics , Photosynthesis/genetics , Plant Proteins/classification , Plant Proteins/metabolism , Plant Roots/anatomy & histology , Plant Roots/growth & development , Plant Roots/metabolism , Protoporphyrins/biosynthesis , Raphanus/anatomy & histology , Raphanus/growth & development , Raphanus/metabolism
15.
Appl Environ Microbiol ; 87(10)2021 04 27.
Article in English | MEDLINE | ID: mdl-33712421

ABSTRACT

A controlled greenhouse study was performed to determine the effect of manure or compost amendments, derived during or in the absence of antibiotic treatment of beef and dairy cattle, on radish taproot-associated microbiota and indicators of antibiotic resistance when grown in different soil textures. Bacterial beta diversity, determined by 16S rRNA gene amplicon sequencing, bifurcated according to soil texture (P < 0.001, R = 0.501). There was a striking cross-effect in which raw manure from antibiotic-treated and antibiotic-free beef and dairy cattle added to loamy sand (LS) elevated relative (16S rRNA gene-normalized) (by 0.9 to 1.9 log10) and absolute (per-radish) (by 1.1 to 3.0 log10) abundances of intI1 (an integrase gene and indicator of mobile multiantibiotic resistance) on radishes at harvest compared to chemical fertilizer-only control conditions (P < 0.001). Radishes tended to carry fewer copies of intI1 and sul1 when grown in silty clay loam than LS. Composting reduced relative abundance of intI1 on LS-grown radishes (0.6 to 2.4 log10 decrease versus corresponding raw manure; P < 0.001). Effects of antibiotic use were rarely discernible. Heterotrophic plate count bacteria capable of growth on media containing tetracycline, vancomycin, sulfamethazine, or erythromycin tended to increase on radishes grown in turned composted antibiotic-treated dairy or beef control (no antibiotics) manures relative to the corresponding raw manure in LS (0.8- to 2.3-log10 increase; P < 0.001), suggesting that composting sometimes enriches cultivable bacteria with phenotypic resistance. This study demonstrates that combined effects of soil texture and manure-based amendments influence the microbiota of radish surfaces and markers of antibiotic resistance, illuminating future research directions for reducing agricultural sources of antibiotic resistance.IMPORTANCE In working toward a comprehensive strategy to combat the spread of antibiotic resistance, potential farm-to-fork routes of dissemination are gaining attention. The effects of preharvest factors on the microbiota and corresponding antibiotic resistance indicators on the surfaces of produce commonly eaten raw is of special interest. Here, we conducted a controlled greenhouse study, using radishes as a root vegetable grown in direct contact with soil, and compared the effects of manure-based soil amendments, antibiotic use in the cattle from which the manure was sourced, composting of the manure, and soil texture, with chemical fertilizer only as a control. We noted significant effects of amendment type and soil texture on the composition of the microbiota and genes used as indicators of antibiotic resistance on radish surfaces. The findings take a step toward identifying agricultural practices that aid in reducing carriage of antibiotic resistance and corresponding risks to consumers.


Subject(s)
Drug Resistance, Microbial , Fertilizers , Manure , Raphanus/microbiology , Soil Microbiology , Animals , Anti-Bacterial Agents/pharmacology , Bacterial Proteins/genetics , Cattle , Drug Resistance, Microbial/genetics , Microbiota , RNA, Ribosomal, 16S/genetics , Raphanus/growth & development , Soil
16.
Microb Cell Fact ; 20(1): 40, 2021 Feb 08.
Article in English | MEDLINE | ID: mdl-33557838

ABSTRACT

BACKGROUND: Microbial surfactants called biosurfactants, thanks to their high biodegradability, low toxicity and stability can be used not only in bioremediation and oil processing, but also in the food and cosmetic industries, and even in medicine. However, the high production costs of microbial surfactants and low efficiency limit their large-scale production. This requires optimization of management conditions, including the possibility of using waste as a carbon source, such as food processing by-products. This papers describes the production and characterization of the biosurfactant obtained from the endophytic bacterial strain Bacillus pumilus 2A grown on various by-products of food processing and its potential applications in supporting plant growth. Four different carbon and nitrogen sources, pH, inoculum concentration and temperature were optimized within Taguchi method. RESULTS: Optimization of bioprocess within Taguchi method and experimental analysis revealed that the optimal conditions for biosurfactant production were brewer's spent grain (5% w/v), ammonium nitrate (1% w/v), pH of 6, 5% of inoculum, and temperature at 30 °C, leading to 6.8 g/L of biosurfactant. Based on gas chromatography-mass spectrometry and Fourier transform infrared spectroscopy analysis produced biosurfactant was determined as glycolipid. Obtained biosurfactant has shown high and long term thermostability, surface tension of 47.7 mN/m, oil displacement of 8 cm and the emulsion index of 69.11%. The examined glycolipid, used in a concentration of 0.2% significantly enhanced growth of Phaseolus vulgaris L. (bean), Raphanus L. (radish), Beta vulgaris L. (beetroot). CONCLUSIONS: The endophytic Bacillus pumilus 2A produce glycolipid biosurfactant with high and long tem thermostability, what makes it useful for many purposes including food processing. The use of brewer's spent grain as the sole carbon source makes the production of biosurfactants profitable, and from an environmental point of view, it is an environmentally friendly way to remove food processing by products. Glycolipid produced by endophytic Bacillus pumilus 2A significantly improve growth of Phaseolus vulgaris L. (bean), Raphanus L. (radish), Beta vulgaris L. (beetroot). Obtained results provide new insight to the possible use of glycolipids as plant growth promoting agents.


Subject(s)
Bacillus pumilus , Beta vulgaris/growth & development , Endophytes , Phaseolus/growth & development , Raphanus/growth & development , Surface-Active Agents , Bacillus pumilus/chemistry , Bacillus pumilus/metabolism , Endophytes/chemistry , Endophytes/metabolism , Surface-Active Agents/isolation & purification , Surface-Active Agents/metabolism , Surface-Active Agents/pharmacology
17.
J Sci Food Agric ; 101(4): 1685-1698, 2021 Mar 15.
Article in English | MEDLINE | ID: mdl-33275790

ABSTRACT

BACKGROUND: Raphanus sativus var. caudatus or Thai rat-tailed radish (RTR) contains glucosinolates and isothiocyanates with chemopreventive effects; however, only mature plants have been investigated to date. Thus, the present study aimed to determine isothiocyanates, phenolic compounds and flavonoid compounds, antioxidant activity, cytotoxicity, and antiproliferative activity of RTR microgreens grown from seeds treated with cold plasma (21 kV for 5 min), organic elicitor (160 mmol L-1 NaCl, 10 mmol L-1 CaCl2 or 176 mmol L-1 sucrose) or both in combination. Seeds were germinated on vermiculite and sprayed with deionized water or elicitor for 7 days before harvest. RESULTS: Cold plasma had insignificant effect on growth, whereas NaCl and CaCl2 increased fresh weight. Plasma with CaCl2 led to the highest total isothiocyanate (ITC) content [1.99 g kg-1 dry weight (DW)] in RTR microgreens containing raphasatin as the only ITC detected. Plasma treatment gave the highest total phenolic content (7.56 mg gallic acid equivalents g-1 DW), antioxidant activity from a 2,2-diphenyl-1-picrylhydrazyl assay (7.70 mg trolox equivalents g-1 DW) and ferric reducing antioxidant power assay (21.72 mg Fe2+ g-1 DW). Microgreen extracts from plasma showed an IC50 value of 29.28 and 13.83 µg mL-1 towards MCF-7 and HepG2, respectively, with inhibitory properties on matrix metalloproteinase (MMP)-2 and MMP-9 proteins. Plasma enhanced Bax and Caspase-3 gene expression but reduced Bcl-2 and MMP-9 expression, indicating activation of apoptosis. CONCLUSION: Cold plasma shows promise as an innovative tool to enhance bioactive compounds with chemopreventive benefits in microgreens. © 2020 Society of Chemical Industry.


Subject(s)
Antioxidants/analysis , Plant Extracts/analysis , Plasma Gases/pharmacology , Raphanus/chemistry , Raphanus/drug effects , Antineoplastic Agents, Phytogenic/analysis , Antineoplastic Agents, Phytogenic/pharmacology , Antioxidants/pharmacology , Cell Proliferation/drug effects , Gallic Acid/analysis , Gallic Acid/pharmacology , Glucosinolates/analysis , Glucosinolates/pharmacology , Hep G2 Cells , Humans , Phenols/analysis , Phenols/pharmacology , Plant Extracts/pharmacology , Raphanus/growth & development , Thailand
18.
J Sci Food Agric ; 101(2): 536-541, 2021 Jan 30.
Article in English | MEDLINE | ID: mdl-32662095

ABSTRACT

BACKGROUND: Splitting is a problem that seriously affects appearance and marketability in a number of fruit and vegetables. In summer radish (Raphanus sativus L.), splitting can occur during growth, harvesting and postharvest. We investigated the factors affecting splitting susceptibility in summer radish cv. Celesta during postharvest handling. RESULTS: Splitting susceptibility was negatively related to temperature, with higher temperature reducing splitting due to dropping impact. Radish diameter was positively associated with compression failure force, suggesting that larger radishes are more resistant to compressive splitting. An increase in radish hypocotyl water content (WC) was associated with an increase in splitting susceptibility due to impact and decrease in failure force for both compression and puncture forces. Increased hypocotyl WC may increase splitting susceptibility by increasing the water potential of the radish tissue. In agreement, we found that increased hypocotyl WC was associated with higher internal water potential in radish tissue. CONCLUSIONS: We therefore recommend that the hypocotyl WC of summer radish crops be managed during the harvest and postharvest phases, and that crops are processed at higher, ambient, temperature in order to reduce splitting, before storing at low temperature and high humidity to maintain quality and shelf life. © 2020 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.


Subject(s)
Plant Tubers/chemistry , Raphanus/chemistry , Water/analysis , Plant Tubers/growth & development , Raphanus/growth & development , Raphanus/metabolism , Seasons , Temperature , Water/metabolism
19.
Dokl Biochem Biophys ; 495(1): 296-299, 2020 Nov.
Article in English | MEDLINE | ID: mdl-33368038

ABSTRACT

The growth-stimulating activity of three selenium nanocomposites (NCs) in various matrices based on arabinogalactan (NC Se/AG, 6.4% Se), starch (NC Se/St, 2% Se), and carrageenan (NC Se/Car, 12% Se) with respect to plants of radish, soybean, and potato was investigated. It was shown that the treatment of plant seeds with NCs stimulated root growth during germination. It was found that the studied NCs affected both the level of lipid peroxidation and the activity of the antioxidant enzyme glutathione peroxidase (GPX). The treatment of radish seeds with NCs stimulated root growth during their germination and reduced the content of diene conjugates (DC) in root tissues. It was shown that soaking seeds in NC Se/AG solution increased the GPX activity in the tissues of the radish root by 40%. Stimulation of soybean root growth under the influence of NC Se/Car may also be associated with the activation of GPX. Furthermore, in potato plants, this NC led to the stimulation of germination; however, this was probably due to the activation of other antioxidant enzymes. The results obtained allow us to consider Se NCs as potential plant growth stimulants.


Subject(s)
Glycine max/drug effects , Nanocomposites/chemistry , Raphanus/drug effects , Selenium/pharmacology , Solanum tuberosum/drug effects , Antioxidants/chemistry , Antioxidants/pharmacology , Germination/drug effects , Glutathione Peroxidase/metabolism , Lipid Peroxidation/drug effects , Nanocomposites/administration & dosage , Polymers/chemistry , Polymers/pharmacology , Raphanus/growth & development , Raphanus/metabolism , Seeds/drug effects , Seeds/growth & development , Seeds/metabolism , Selenium/chemistry , Solanum tuberosum/growth & development , Solanum tuberosum/metabolism , Glycine max/growth & development , Glycine max/metabolism
20.
Article in English | MEDLINE | ID: mdl-33020389

ABSTRACT

Excessive use of fungicides in agriculture may result in substantial accumulation of active residues in soil, which affect crop health and yield. We investigated the response of Raphanus sativus (white radish) to fungicides in soil and potential beneficial interactions of radish plants with fungicide-tolerant plant growth-promoting rhizobacteria (PGPR). The PGPR were isolated from cabbage and mustard rhizospheres. Morphological and biochemical characteristics measured using standard methods, together with analysis of partial 16S rRNA gene sequences, revealed that fungicide-tolerant PGPR, isolates PS3 and AZ2, were closely related to Pseudomonas spp. These PGPR survived in the presence of high fungicide concentrations i.e., up to 2400 µg mL-1 carbendazim (CBZM) and 3200 µg mL-1 hexaconazole (HEXA). Bacterial isolates produced plant growth stimulants even under fungicide stress, though fungicides induced surface morphological distortion and alteration in membrane permeability of these bacteria, which was proved by a set of microscopic observations. Fungicides considerably affected the germination efficiency, growth, and physiological development of R. sativus, but these effects were relieved when inoculated with PGPR isolates. For instance, CBZM at 1500 mg kg-1 decreased whole dry biomass by 71%, whole plant length by 54%, total chlorophyll by 50%, protein content by 61%, and carotenoid production by 29%. After applying isolate AZ2 for white radish grown in CBZM (10 mg kg-1)-amended soil, it could improve plant growth and development with increased whole plant dry weight (10%), entire plant length (13%) and total chlorophyll content (18%). Similarly, isolate PS3 enhanced plant survival by relieving plant stress with declined biomarkers, i.e., proline (12%), malondialdehyde (3%), ascorbate peroxidase (6.5%), catalase (18%), and glutathione reductase (4%). Application of isolates AZ2 and PS3 could be effective for remediation of fungicide-contaminated soil and for improving the cultivation of radish plants while minimizing inputs of fungicides.


Subject(s)
Fungicides, Industrial/adverse effects , Raphanus/growth & development , Soil Microbiology , Plant Roots , RNA, Ribosomal, 16S , Raphanus/drug effects , Soil
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