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1.
Nucleic Acids Res ; 48(16): 9019-9036, 2020 09 18.
Article in English | MEDLINE | ID: mdl-32725242

ABSTRACT

Cilia assembly is under strict transcriptional control during animal development. In vertebrates, a hierarchy of transcription factors (TFs) are involved in controlling the specification, differentiation and function of multiciliated epithelia. RFX TFs play key functions in the control of ciliogenesis in animals. Whereas only one RFX factor regulates ciliogenesis in C. elegans, several distinct RFX factors have been implicated in this process in vertebrates. However, a clear understanding of the specific and redundant functions of different RFX factors in ciliated cells remains lacking. Using RNA-seq and ChIP-seq approaches we identified genes regulated directly and indirectly by RFX1, RFX2 and RFX3 in mouse ependymal cells. We show that these three TFs have both redundant and specific functions in ependymal cells. Whereas RFX1, RFX2 and RFX3 occupy many shared genomic loci, only RFX2 and RFX3 play a prominent and redundant function in the control of motile ciliogenesis in mice. Our results provide a valuable list of candidate ciliary genes. They also reveal stunning differences between compensatory processes operating in vivo and ex vivo.


Subject(s)
Cilia/physiology , Ependyma/cytology , Gene Expression Regulation, Developmental , Regulatory Factor X Transcription Factors/physiology , Regulatory Factor X1/physiology , Animals , Cilia/genetics , Mice , Mice, Inbred C57BL
2.
Zhong Nan Da Xue Xue Bao Yi Xue Ban ; 41(11): 1117-1123, 2016 Nov 28.
Article in Chinese | MEDLINE | ID: mdl-27932754

ABSTRACT

OBJECTIVE: To construct overexpression lentivirus vector for human regulatory factor X1 (RFX1) gene, and to explore its effect on proliferation of F98 cell line.
 Methods: Huamn RFX1 gene was amplified by polymerase reaction. Gene amplification products were inserted into lentivirus vector pITA, and the lentivirus vector pITA-RFX1 was constructed. The constructed vector was verified by agarose gel electrophoresis and DNA sequencing. Lentivirus vector pITA-RFX1 and virus packaging plasmids were cotransfected into 293T cells, and then transfected into F98 cells. RFX1 protein expression were detected by Western blot and laser confocal before and after transfection. Flow cytometry and cell counting kit-8 were used to detect cellular proliferation.
 Results: Agarose gel electrophoresis and DNA sequencing showed that recombinant lentivirus plasmids pITA-RFX1 were constructed successfully. After transfection of pITA-RFX1, the RFX1 protein were over-expressed, which significantly inhibited the proliferation of F98 cells.
 Conclusion: The overexpression lentivirus vector for RFX1 was constrcted successfully, and the up-regulation of RFX1 can prevent the proliferation of glioblastoma cells.


Subject(s)
Glioblastoma/genetics , Glioblastoma/physiopathology , Regulatory Factor X1/physiology , Animals , Cell Line, Tumor , Cell Proliferation/genetics , Genetic Vectors , HEK293 Cells , Humans , Lentivirus/genetics , Plasmids , Rats , Regulatory Factor X1/genetics , Transfection , Up-Regulation
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