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1.
J Agric Food Chem ; 68(27): 7093-7102, 2020 Jul 08.
Article in English | MEDLINE | ID: mdl-32530619

ABSTRACT

Succinate dehydrogenase (SDH) is regarded as a promising target for fungicide discovery. To continue our ongoing studies on the discovery of novel SDH inhibitors as fungicides, novel pyrazole-thiazole carboxamides were designed, synthesized, and evaluated for their antifungal activity. The results indicated that compounds 9ac, 9bf, and 9cb showed excellent in vitro activities against Rhizoctonia cerealis with EC50 values from 1.1 to 4.9 mg/L, superior to that of the commercial fungicide thifluzamide (EC50 = 23.1 mg/L). Compound 9cd (EC50 = 0.8 mg/L) was far more active than thifluzamide (EC50 = 4.9 mg/L) against Sclerotinia sclerotiorum. Compound 9ac exhibited promising in vivo activity against Rhizoctonia solani (90% at 10 mg/L), which was better than that of thifluzamide (80% at 10 mg/L). The field experiment showed that compound 9ac had 74.4% efficacy against Rhizoctonia solani on the 15th day after two consecutive sprayings at an application rate of 4.80 g a.i./667 m2, which was close to that of thifluzamide (83.3%). Furthermore, molecular docking explained the possible binding mode of compound 9ac in the RcSDH active site. Our studies indicated that the pyrazole-thiazole carboxamide hybrid is a new scaffold of SDH inhibitors.


Subject(s)
Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/pharmacology , Fungal Proteins/antagonists & inhibitors , Fungicides, Industrial/chemical synthesis , Fungicides, Industrial/pharmacology , Pyrazoles/chemistry , Succinate Dehydrogenase/antagonists & inhibitors , Thiazoles/chemistry , Ascomycota/chemistry , Ascomycota/drug effects , Ascomycota/enzymology , Drug Design , Enzyme Inhibitors/chemistry , Fungal Proteins/metabolism , Fungicides, Industrial/chemistry , Molecular Docking Simulation , Pyrazoles/pharmacology , Rhizoctonia/chemistry , Rhizoctonia/drug effects , Rhizoctonia/genetics , Structure-Activity Relationship , Succinate Dehydrogenase/metabolism , Thiazoles/pharmacology
2.
J Agric Food Chem ; 67(47): 13185-13194, 2019 Nov 27.
Article in English | MEDLINE | ID: mdl-31697490

ABSTRACT

In searching for novel fungicidal leads, the novel bioactive succinate dehydrogenase inhibitor (SDHI) derivatives were designed and synthesized by the inversion of carbonyl and amide groups. Bioassay indicated that compound 5i stood out with a broad spectrum of in vitro activity against five fungi. Its EC50 value (0.73 µg/mL) was comparable to that of boscalid (EC50 of 0.51 µg/mL) and fluxapyroxad (EC50 of 0.19 µg/mL) against Sclerotinia sclerotiorum. For Rhizoctonia cerealis, 5i and 5p with EC50 values of 4.61 and 6.48 µg/mL, respectively, showed significantly higher activity than fluxapyroxad with the EC50 value of 16.99 µg/mL. In vivo fungicidal activity of 5i exhibited an excellent inhibitory rate (100%) against Puccinia sorghi at 50 µg/mL, while the positive control boscalid showed only a 70% inhibitory rate. Moreover, 5i showed promising fungicidal activity with a 60% inhibitory rate against Rhizoctonia solani at 1 µg/mL, which was better than that of boscalid (30%). Compound 5i possessed better in vivo efficacy against P. sorghi and R. solani than boscalid. Molecular docking showed that even the carbonyl oxygen atom of 5i was far from the pyrazole ring. It could also form hydrogen bonds toward the hydroxyl hydrogen and amino hydrogen of TYR58 and TRP173 on SDH, respectively, which consisted of the positive control fluxapyroxad. Fluorescence quenching analysis and SDH enzymatic inhibition studies also validated its mode of action. Our studies showed that 5i was worthy of further investigation as a promising fungicide candidate.


Subject(s)
Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/pharmacology , Fungal Proteins/antagonists & inhibitors , Fungicides, Industrial/chemical synthesis , Fungicides, Industrial/pharmacology , Succinate Dehydrogenase/antagonists & inhibitors , Ascomycota/chemistry , Ascomycota/drug effects , Ascomycota/enzymology , Enzyme Inhibitors/chemistry , Fungal Proteins/chemistry , Fungal Proteins/metabolism , Fungicides, Industrial/chemistry , Molecular Docking Simulation , Rhizoctonia/chemistry , Rhizoctonia/drug effects , Rhizoctonia/enzymology , Structure-Activity Relationship , Succinate Dehydrogenase/chemistry , Succinate Dehydrogenase/metabolism
3.
Spectrochim Acta A Mol Biomol Spectrosc ; 222: 117236, 2019 Nov 05.
Article in English | MEDLINE | ID: mdl-31200265

ABSTRACT

Synthesis and chelation induced fluorescence emission from two imidazo[1,2-a]pyridine derivatives are described. The nonfluorescent molecule 1 containing N and O donor atoms, achieves coplanarity upon interactions with trivalent cations Al3+, Fe3+ and Cr3+, that favors fluorescence emission. Molecule 2 containing two N donor atoms attains coplanarity upon interaction with the only Zn2+ and becomes fluorescent. Both molecules 1 and 2 form a 1:1 complex with interacting metal ions. Other trivalent metal ions (including Bi3+ and In3+) and common divalent metal ions (including Hg2+ and Cd2+) fail to form any complex with 1 or 2, and they do not interfere in the detection of Zn2+, Al3+, Fe3+ or Cr3+ ions. Noninterference of other metal ions renders 1 and 2 suitable for the detection of fungal cells contaminated with Zn2+, Al3+, Fe3+ or Cr3+ ions.


Subject(s)
Chelating Agents/chemistry , Fluorescent Dyes/chemistry , Metals/analysis , Pyridines/chemistry , Cations/analysis , Microscopy, Fluorescence/methods , Models, Molecular , Optical Imaging/methods , Rhizoctonia/chemistry , Rhizoctonia/cytology , Spectrometry, Fluorescence/methods
4.
Lipids ; 53(5): 527-537, 2018 05.
Article in English | MEDLINE | ID: mdl-30009385

ABSTRACT

Oxylipin biosynthesis by fungi is catalyzed by both the lipoxygenase (LOX) family and the linoleate diol synthase (LDS) family of the peroxidase-cyclooxygenase superfamily. Rhizoctonia solani, a pathogenic fungus, infects staple crops such as potato and rice. The genome predicts three genes with 9-13 introns, which code for tentative dioxygenase (DOX)-cytochrome P450 fusion enzymes of the LDS family, and one gene, which might code for a 13-LOX. The objective was to determine whether mycelia or nitrogen powder of mycelia oxidized unsaturated C18 fatty acids to LDS- or LOX-related metabolites. Mycelia converted 18:2n-6 to 8R-hydroxy-9Z,12Z-octadecadienoic acid and to an α-ketol, 9S-hydroxy-10-oxo-12Z-octadecenoic acid. In addition to these metabolites, nitrogen powder of mycelia oxidized 18:2n-6 to 9S-hydroperoxy-10E, 12Z-octadecadienoic, and 13S-hydroperoxy-9Z,11E-octadecadienoic acids; the latter was likely formed by the predicted 13-LOX. 18:1n-9 was transformed into 8S-hydroperoxy-9Z-octadecenoic and into 8S,9S-dihydroxy-10E-octadecenoic acids, indicating the expression of 8,9-diol synthase. The allene oxide, 9S(10)epoxy-10,12Z-octadecadienoic acid, is unstable and decomposes rapidly to the α-ketol above, indicating biosynthesis by 9S-DOX-allene oxide synthase. This allene oxide and α-ketol are also formed by potato stolons, which illustrates catalytic similarities between the plant host and fungal pathogen.


Subject(s)
Ethylenes/metabolism , Oxides/metabolism , Oxygenases/metabolism , Oxylipins/metabolism , Rhizoctonia/chemistry , Ethylenes/chemistry , Oxides/chemistry , Oxygenases/genetics , Oxylipins/chemistry , Rhizoctonia/metabolism
5.
Int J Biol Macromol ; 115: 106-113, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29649535

ABSTRACT

A fucomannogalactan from Rhizoctonia solani biomass was obtained after hot aqueous extraction and purified by freeze-thaw cycles and gel filtration chromatography on Sepharose CL-6B. The polysaccharide was homogeneous after HPSEC/RID analysis (Mw/Mn~1.1), displaying an average molecular weight of 15.4×103Da. Its chemical structure was determined by methylation analysis (GC/MS) and spectroscopy (FTIR, 1D and 2D NMR). The polysaccharide had a branched α-1,6-linked Galp backbone with 66% linear residues, a number of which were at O-3 methylated. Side chains (34%) were always linked at O-2 positions of the main chain and consisted of single, non-reducing ends of α-d-Manp (6%) and α-l-Fucp (28%). Analysis of its biological activity showed that the highly purified fucomannogalactan from R. solani inhibited the proliferation of colon cancer cells in vitro, but that it did not have the same activity against lung cancer cells.


Subject(s)
Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Galactans/chemistry , Polysaccharides/chemistry , Polysaccharides/pharmacology , Rhizoctonia/chemistry , Antineoplastic Agents/isolation & purification , Cell Line, Tumor , Cell Proliferation/drug effects , Colonic Neoplasms/pathology , Humans , Molecular Weight , Polysaccharides/isolation & purification , Water/chemistry
6.
J Photochem Photobiol B ; 180: 155-165, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29433053

ABSTRACT

Early detection of soil-borne pathogens, which have a negative effect on almost all agricultural crops, is crucial for effective targeting with the most suitable antifungal agents and thus preventing and/or reducing their severity. They are responsible for severe diseases in various plants, leading in many cases to substantial economic losses. In this study, infrared (IR) spectroscopic method, which is known as sensitive, accurate and rapid, was used to discriminate between different fungi in a mixture was evaluated. Mixed and pure samples of Colletotrichum, Verticillium, Rhizoctonia, and Fusarium genera were measured using IR microscopy. Our spectral results showed that the best differentiation between pure and mixed fungi was obtained in the 675-1800 cm-1 wavenumber region. Principal components analysis (PCA), followed by linear discriminant analysis (LDA) as a linear classifier, was performed on the spectra of the measured classes. Our results showed that it is possible to differentiate between mixed-calculated categories of phytopathogens with high success rates (~100%) when the mixing percentage range is narrow (40-60) in the genus level; when the mixing percentage range is wide (10-90), the success rate exceeded 85%. Also, in the measured mixed categories of phytopathogens it is possible to differentiate between the different categories with ~100% success rate.


Subject(s)
Fungi/isolation & purification , Soil Microbiology , Spectroscopy, Fourier Transform Infrared , Colletotrichum/chemistry , Colletotrichum/isolation & purification , Discriminant Analysis , Fungi/chemistry , Fusarium/chemistry , Fusarium/isolation & purification , Microscopy , Multivariate Analysis , Principal Component Analysis , Rhizoctonia/chemistry , Rhizoctonia/isolation & purification , Verticillium/chemistry , Verticillium/isolation & purification
7.
Protoplasma ; 255(1): 359-373, 2018 Jan.
Article in English | MEDLINE | ID: mdl-28879466

ABSTRACT

In the present study, the spread of Rhizoctonia solani-induced disease was limited when cucumber plants were pretreated with Trichoderma atroviride TRS25. The systemic disease suppression was related to TRS25-induced resistance (TISR) induction with simultaneous plant growth promotion. Protection of cucumber was related to enhanced activity of defense enzymes, e.g., guaiacol peroxidase (GPX), syringaldazine peroxidase (SPX), phenylalanine ammonia lyase (PAL), and polyphenol oxidase (PPO) as well as phenolic (PC) concentration increases in the conditions of hydrogen peroxide (H2O2) accumulation, resulting in thiobarbituric acid reactive substance (TBARS) decrease. Moreover, the obtained results indicated that TISR might depend on accumulation of salicylic acid derivatives, that is methyl salicylate (MeSA), ethylhexyl salicylate (EHS), salicylic acid glucosylated conjugates (SAGC), and ß-cyclocitral as well as volatile organic compounds (VOC) such as Z-3-hexanal, Z-3-hexenol, and E-2-hexenal. The results point to important, not previously documented, roles of these VOC in TISR signaling with up-regulation of PR1 and PR5 gene characteristic of systemic acquired resistance (SAR) and of PR4 gene, marker of induced systemic resistance (ISR). The study established that TRS25 enhanced deposition of callose and lignin in specialized plant cells, which protected vascular system in cucumber shoots and roots as well as assimilation cells and dermal tissues in shoots and leaves. These compounds protected cucumber organs against R. solani influence and made them more flexible and resilient, which contributed to better nutrition and hydration of plants. The growth promotion coupled with systemic mobilization of biochemical and mechanical strengthening might be involved in multilayer protection of cucumber against R. solani activated by TRS25.


Subject(s)
Gene Expression Regulation, Plant/genetics , Plant Proteins/genetics , Rhizoctonia/chemistry , Trichoderma/chemistry
8.
Molecules ; 22(8)2017 Aug 16.
Article in English | MEDLINE | ID: mdl-28813015

ABSTRACT

Bacterial volatile compounds (BVCs) have been reported to enhance plant growth and elicit plant defenses against fungal infection and insect damage. The objective of this study was to determine transcriptomic changes in response to synthetic BVC that could be associated with plant resistance to Rhizoctonia solani in creeping bentgrass. The 2,3-butanediol (BD) (250 µM) was sprayed on creeping bentgrass leaves grown in jam jars. The result showed that synthetic BD induced plant defense against R. solani for creeping bentgrass. Transcriptomic analysis demonstrated that more genes were repressed by BD while less showed up-regulation. BD suppressed the expression of some regular stress-related genes in creeping bentgrass, such as pheromone activity, calcium channel activity, photosystem II oxygen evolving complex, and hydrolase activity, while up-regulated defense related transcription factors (TFs), such as basic helix-loop-helix (bHLH) TFs, cysteine2-cysteine2-contans-like (C2C2-CO) and no apical meristem TFs (NAC). Other genes related to disease resistance, such as jasmonic acid (JA) signaling, leucine rich repeats (LRR)-transmembrane protein kinase, pathogen-related (PR) gene 5 receptor kinase and nucleotide binding site-leucine rich repeats (NBS-LRR) domain containing plant resistance gene (R-gene) were also significantly up-regulated. These results suggest that BD may induce changes to the plant transcriptome in induced systemic resistance (ISR) pathways.


Subject(s)
Agrostis/drug effects , Butylene Glycols/pharmacology , Gene Expression Regulation, Plant/drug effects , Volatile Organic Compounds/pharmacology , Agrostis/genetics , Agrostis/growth & development , Butylene Glycols/chemistry , Disease Resistance/genetics , Gene Expression Profiling , Plant Development/drug effects , Plant Development/genetics , Plant Leaves/drug effects , Plant Leaves/genetics , Plant Leaves/growth & development , Rhizoctonia/chemistry , Rhizoctonia/pathogenicity , Transcription Factors/genetics , Volatile Organic Compounds/chemistry
9.
PLoS One ; 12(5): e0177464, 2017.
Article in English | MEDLINE | ID: mdl-28489938

ABSTRACT

Rhizoctonia solani is a causative agent of sheath blight, which results in huge economic losses every year. During its life cycle, the formation of sclerotia helps Rhizoctonia solani withstand a variety of unfavorable factors. Oxidative stress is a key factor that induces sclerotium formation. The differentiated and undifferentiated phenotypes of R. solani AG-1-IA were obtained by controlling aerial conditions. Metabolomics based on the mass spectrometry technique combined with multivariate and univariate analyses was used to investigate the metabolic variation in vegetative, differentiated and undifferentiated mycelia. Our results revealed that during maturation, the metabolic levels of N2-acetyl-L-ornithine, 3,1'-(OH)2-Gamma-carotene, (5Z,7E)-(1S,3R)-24,24-difluoro-24a-homo-9,10-seco-5,7,10(19)-cholestatrien-1,3,25-triol, stoloniferone O, PA(O-18:0/12:0), PA(P-16:0/14:0), PA(P-16:0/16:(19Z)) and PA(P-16:0/17:2(9Z,12Z)) were suppressed in both differentiated and undifferentiated mycelia. The concentrations of PE(20:1(11Z)/14:1(9Z)), PE(P-16:0/20:4(5Z,8Z,11Z,13E)(15OH[S])) and PS(12:0/18:1(9Z)) were increased in the differentiated group, while increased levels of N(gamma)-nitro-L-arginine, tenuazonic acid and 9S,10S,11R-trihydroxy-12Z,15Z-octadecadienoic acid were found in the undifferentiated group. Our results suggest that different levels of these metabolites may act as biomarkers for the developmental stages of R. solani AG-1-IA. Moreover, the mechanisms of sclerotium formation and mycelium differentiation were elucidated at the metabolic level.


Subject(s)
Mycelium/growth & development , Mycelium/metabolism , Rhizoctonia/growth & development , Rhizoctonia/metabolism , Chromatography, High Pressure Liquid , Mass Spectrometry , Metabolomics , Mycelium/chemistry , Phenotype , Plant Diseases/microbiology , Rhizoctonia/chemistry
10.
Proteomics ; 17(11)2017 Jun.
Article in English | MEDLINE | ID: mdl-28445005

ABSTRACT

Rhizochalinin (Rhiz) is a novel marine natural sphingolipid-like compound, which shows promising in vitro and in vivo activity in human castration-resistant prostate cancer. In the present study, a global proteome screening approach was applied to investigate molecular targets and biological processes affected by Rhiz in castration-resistant prostate cancer. Bioinformatical analysis of the data predicted an antimigratory effect of Rhiz on cancer cells. Validation of proteins involved in the cancer-associated processes, including cell migration and invasion, revealed downregulation of specific isoforms of stathmin and LASP1, as well as upregulation of Grp75, keratin 81, and precursor IL-1ß by Rhiz. Functional analyses confirmed an antimigratory effect of Rhiz in PC-3 cells. Additionally, predicted ERK1/2 activation was confirmed by Western blotting analysis, and revealed prosurvival effects in Rhiz-treated prostate cancer cells indicating a potential mechanism of resistance. A combination of Rhiz with MEK/ERK inhibitors PD98059 (non-ATP competitive MEK1 inhibitor) and FR180204 (ATP-competitive ERK1/2 inhibitor) resulted in synergistic effects. This work provides further insights into the molecular mechanisms underlying Rhiz bioactivity. Furthermore, our research is exemplary for the ability of proteomics to predict drug targets and mode of action of natural anticancer agents.


Subject(s)
Antineoplastic Agents/pharmacology , Fatty Alcohols/pharmacology , Gene Expression Regulation, Neoplastic/drug effects , Prostatic Neoplasms/metabolism , Proteome/analysis , Adaptor Proteins, Signal Transducing/metabolism , Cell Movement/drug effects , Cell Proliferation/drug effects , Cells, Cultured , Cytoskeletal Proteins/metabolism , Drug Screening Assays, Antitumor , Fibroblasts/drug effects , Fibroblasts/metabolism , HSP70 Heat-Shock Proteins/metabolism , Humans , Interleukin-1beta/metabolism , Keratins, Hair-Specific/metabolism , Keratins, Type II/metabolism , LIM Domain Proteins/metabolism , MAP Kinase Signaling System/drug effects , Male , Membrane Proteins/metabolism , Prostatic Neoplasms/drug therapy , Prostatic Neoplasms/pathology , Proteomics/methods , Rhizoctonia/chemistry , Stathmin/metabolism
11.
Proteomics ; 16(11-12): 1742-6, 2016 06.
Article in English | MEDLINE | ID: mdl-26959280

ABSTRACT

Studying microbial interactions by MALDI mass spectrometry imaging (MSI) directly from growing media is a difficult task if high sensitivity is demanded. We present a quick and robust sample preparation strategy for growing fungi (Trichoderma atroviride, Rhizoctonia solani) on glass slides to establish a miniaturized confrontation assay. By this we were able to visualize metabolite distributions by MALDI MSI after matrix deposition with a home-built sublimation device and thorough recrystallization. We present for the first time MALDI MSI data for secondary metabolite release during active mycoparasitism.


Subject(s)
Rhizoctonia/metabolism , Specimen Handling/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Trichoderma/metabolism , Gene Expression Regulation, Fungal , Microbial Interactions , Rhizoctonia/chemistry , Trichoderma/chemistry
12.
J Agric Food Chem ; 64(15): 3101-10, 2016 Apr 20.
Article in English | MEDLINE | ID: mdl-27019116

ABSTRACT

Rhizoctonia solani AG 4 is a soilborne necrotrophic fungal plant pathogen that causes economically important diseases on agronomic crops worldwide. This study used a proteomics approach to characterize both intracellular proteins and the secretome of R. solani AG 4 isolate Rs23A under several growth conditions, the secretome being highly important in pathogenesis. From over 500 total secretome and soluble intracellular protein spots from 2-D gels, 457 protein spots were analyzed and 318 proteins positively matched with fungal proteins of known function by comparison with available R. solani genome databases specific for anastomosis groups 1-IA, 1-IB, and 3. These proteins were categorized to possible cellular locations and functional groups and for some proteins their putative roles in plant cell wall degradation and virulence. The majority of the secreted proteins were grouped to extracellular regions and contain hydrolase activity.


Subject(s)
Plant Cells/metabolism , Plants/genetics , Proteomics , Rhizoctonia/chemistry , Virulence/physiology , Fungal Proteins/metabolism
13.
J Biomol Struct Dyn ; 34(1): 152-62, 2016.
Article in English | MEDLINE | ID: mdl-25932774

ABSTRACT

We have investigated in vitro antifungal efficiency of nitrogen-doped carbon nanohorn (NCNH) against Rhizoctonia solani (R. solani) plant pathogenic fungi. NCNH with size of 50-60 nm and concentrations of 10, 50, 100, and 150 µg mL(-1) were used. The results showed that growth of fungi in the presence of NCNH was significantly (p > .05) inhibited at 150 µg mL(-1) (85.13 ± .97) after 72 h. The results were validated through computational approaches. Molecular docking analysis of NCNH with endochitinase protein of R. solani was performed to validate the potential of antifungal activity of NCNH. Docking results showed different conformations of interaction of NCNH with endochitinase enzyme. The conformation with least binding energy -13.54 kcal/mol was considered further. It is likely that NCNH interacts with the pathogens by mechanically wrapping, which may be one of the major toxicity actions of NCNH against R. solani. The analysis showed that NCNH might interwinds to endochitinase of R. solani leading to the deactivation of the enzyme. To best of our knowledge, this is the first report of antifungal efficacy of NCNH against R. solani and provides useful information about the application of NCNH in resisting crop disease.


Subject(s)
Antifungal Agents/chemistry , Carbon/chemistry , Nanostructures/chemistry , Rhizoctonia/drug effects , Antifungal Agents/pharmacology , Carbon/pharmacology , Molecular Docking Simulation , Nitrogen/chemistry , Plants/chemistry , Plants/microbiology , Rhizoctonia/chemistry
14.
Appl Spectrosc ; 69(10): 1129-36, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26449805

ABSTRACT

The amount of Rhizoctonia solani in the soil and how much must be present to cause disease in sugar beet (Beta vulgaris L.) is relatively unknown. This is mostly because of the usually low inoculum densities found naturally in soil and the low sensitivity of traditional serial dilution assays. We investigated the usefulness of Fourier transform mid-infrared (MIR) and near-infrared (NIR) spectroscopic properties in identifying the artificial colonization of barley grains with R. solani AG 2-2 IIIB and in detecting R. solani populations in plant tissues and inoculants. The objectives of this study were to compare the ability of traditional plating assays to NIR and MIR spectroscopies to identify R. solani in different-size fractions of colonized ground barley (used as an artificial inoculum) and to differentiate colonized from non-inoculated barley. We found that NIR and MIR spectroscopies were sensitive in resolving different barley particle sizes, with particles that were <0.25 and 0.25-0.5 mm having different spectral properties than coarser particles. Moreover, we found that barley colonized with R. solani had different MIR spectral properties than the non-inoculated samples for the larger fractions (0.5-1.0, 1.0-2.0, and >2.0 mm) of the ground barley. This colonization was confirmed using traditional plating assays. Comparisons with the spectra from pure fungal cultures and non-inoculated barley suggest that the MIR spectrum of colonized barley is different because of the consumption of C substrates by the fungus rather than because of the presence of fungal bands in the spectra of the colonized samples. We found that MIR was better than NIR spectroscopy in differentiating the colonized from the control samples.


Subject(s)
Hordeum/microbiology , Plant Diseases/microbiology , Rhizoctonia/isolation & purification , Spectroscopy, Near-Infrared/methods , Rhizoctonia/chemistry
15.
Org Lett ; 17(9): 2074-7, 2015 May 01.
Article in English | MEDLINE | ID: mdl-25860081

ABSTRACT

Solanioic acid (1), a degraded and rearranged steroid that exhibits in vitro antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA), has been isolated from laboratory cultures of the fungus Rhizoctonia solani obtained from tubers of the plant Cyperus rotundus collected in Sri Lanka. The structure of solanioic acid (1) was elucidated by detailed analysis of NMR data, a single crystal X-ray diffraction analysis of a reduction product 2, and Mosher ester analysis on a derivative of the natural product. Solanioic acid (1) has an unprecedented carbon skeleton.


Subject(s)
Anti-Bacterial Agents/isolation & purification , Cyperus/chemistry , Methicillin-Resistant Staphylococcus aureus/drug effects , Plants, Medicinal/chemistry , Rhizoctonia/chemistry , Steroids/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Crystallography, X-Ray , Molecular Conformation , Molecular Structure , Sri Lanka , Steroids/chemistry , Steroids/isolation & purification
16.
Immunol Lett ; 163(2): 163-72, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25555439

ABSTRACT

We have previously reported that a fungal lectin, Rhizoctonia bataticola lectin (RBL), stimulates proliferation and secretion of Th1/Th2 cytokines in human peripheral blood mononuclear cells (PBMC). In the present study, we evaluated the ability of RBL to differentiate human monocytes to macrophages. RBL induced morphological changes indicative of differentiation in primary monocytes and THP-1 cells. Stimulation with RBL resulted in significant up-regulation of differentiation markers - CD54, HLA-DR, CD11b and CD11c and secretion of proinflammatory cytokines - IL-1ß, TNF-α and IL-6. Functionally, RBL profoundly increased phagocytic activity in monocytes. In THP-1 cells, RBL-induced phagocytosis was higher compared to the effect induced by combination of phorbol-12-myristate-13-acetate (PMA) and lipopolysaccharide (LPS). RBL induced a significant increase in matrix metalloproteinase-9 (MMP-9) activity in comparison with a combined treatment of PMA+LPS. Mechanistic studies revealed the involvement of the NF-κB pathway in RBL-induced differentiation of monocytes. The data suggest that RBL mimics the combined action of PMA and LPS to induce morphological and functional differentiation in human monocytes and monocytic cell line - THP-1 to macrophages. Human monocytes differentiated to macrophages with RBL have the potential as an in vitro model to study macrophage biology.


Subject(s)
Lectins/pharmacology , Macrophages/drug effects , Monocytes/drug effects , Rhizoctonia/chemistry , Binding, Competitive , Cell Adhesion/drug effects , Cell Differentiation/drug effects , Cell Line, Tumor , Cells, Cultured , Cytokines/metabolism , Enzyme-Linked Immunosorbent Assay , Flow Cytometry , Humans , Intercellular Adhesion Molecule-1/metabolism , Lectins/metabolism , Lipopolysaccharides/pharmacology , Macrophage Activation/drug effects , Macrophages/metabolism , Matrix Metalloproteinase 9/metabolism , Microscopy, Confocal , Monocytes/metabolism , NF-kappa B/antagonists & inhibitors , NF-kappa B/metabolism , Nitriles/pharmacology , Phagocytosis/drug effects , Sulfones/pharmacology , Tetradecanoylphorbol Acetate/pharmacology
17.
World J Microbiol Biotechnol ; 30(12): 3037-45, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25164959

ABSTRACT

Rice sheath blight, caused by Rhizoctonia solani, is considered a worldwide destructive rice disease and leads to considerable yield losses. A bio-control agent, Paenibacillus kribbensis PS04, was screened to resist against the pathogen. The inhibitory effects were investigated (>80 %) by the growth of the hyphae. Microscopic observation of the hypha structure manifested that the morphology of the pathogenic mycelium was strongly affected by P. kribbensis PS04. To explore essentially inhibitory mechanisms, proteomic approach was adopted to identify differentially expressed proteins from R. solani GD118 in response to P. kribbensis PS04 using two-dimensional gel electrophoresis. Protein profiling was used to identify 13 differential proteins: 10 proteins were found to be down-regulated while 3 proteins were up-regulated. These proteins were involved in material and energy metabolism, antioxidant activity, protein folding and degradation, and cytoskeleton regulation. Among them, material and energy metabolism was differentially regulated by P. kribbensis PS04. Protein expression was separately inhibited by the bio-control agent in oxidation resistance, protein folding and degradation, and cytoskeleton regulation. Proteome changes of the mycelium assist in understanding how the pathogen was directly suppressed by P. kribbensis PS04.


Subject(s)
Fungal Proteins/analysis , Microbial Interactions , Paenibacillus/physiology , Proteome/analysis , Rhizoctonia/chemistry , Rhizoctonia/physiology , Electrophoresis, Gel, Two-Dimensional , Hyphae/cytology , Hyphae/growth & development , Mass Spectrometry , Microscopy , Oryza/microbiology , Rhizoctonia/cytology , Rhizoctonia/growth & development
18.
Fungal Biol ; 118(5-6): 433-43, 2014.
Article in English | MEDLINE | ID: mdl-24863472

ABSTRACT

Rhizoctonia solani (R. solani), a soil-borne necrotrophic pathogen, causes various plant diseases. Rhizoctonia solani is a mitosporic fungus, the sclerotium of which is the primary inoculum and ensures survival of the fungus during the offseason of the host crop. Since the fungus does not produce any asexual or sexual spores, understanding the biology of sclerotia is important to examine pathogen ecology and develop more efficient methods for crop protection. Here, one- and two-dimensional gel electrophoresis (1-DE and 2-DE, respectively) were used to examine protein regulation during the maturation of fungal sclerotia. A total of 75 proteins (20 proteins from 1-DE using matrix-assisted laser desorption/ionization (MALDI)-time of flight (TOF) mass spectrometry (MS) and 55 proteins from 2-DE using MALDI-TOF MS or MALDI-TOF/TOF MS) were differentially expressed during sclerotial maturation. The identified proteins were classified into ten categories based on their biological functions, including genetic information processing, carbohydrate metabolism, cell defense, amino acid metabolism, nucleotide metabolism, cellular processes, pathogenicity and mycotoxin production, and hypothetical or unknown functions. Interestingly, two vacuole function-related proteins were highly up-regulated throughout sclerotial maturation, which was confirmed at the transcript level by reverse transcriptase polymerase chain reaction (RT-PCR) analysis. These findings contribute to our understanding of the biology of R. solani sclerotia.


Subject(s)
Fungal Proteins/genetics , Rhizoctonia/genetics , Electrophoresis, Gel, Two-Dimensional , Fungal Proteins/chemistry , Fungal Proteins/metabolism , Molecular Sequence Data , Plant Diseases/microbiology , Proteomics , Rhizoctonia/chemistry , Rhizoctonia/metabolism
19.
PLoS One ; 8(11): e79311, 2013.
Article in English | MEDLINE | ID: mdl-24244478

ABSTRACT

We have previously demonstrated immunostimulatory activity of a fungal lectin, Rhizoctonia bataticola lectin (RBL), towards normal human peripheral blood mononuclear cells. The present study aimed to explore the anticancer activities of RBL using human leukemic T-cell lines, Molt-4, Jurkat and HuT-78. RBL exhibited significant binding (>90%) to the cell membrane that was effectively inhibited by complex glycoproteins such as mucin (97% inhibition) and asialofetuin (94% inhibition) but not simple sugars such as N-acetyl-D-galactosamine, glucose and sucrose. RBL induced a dose and time dependent inhibition of proliferation and induced cytotoxicity in the cell lines. The percentage of apoptotic cells, as determined by hypodiploidy, was 33% and 42% in Molt-4 and Jurkat cells, respectively, compared to 3.11% and 2.92% in controls. This effect was associated with a concomitant decrease in the G0/G1 population. Though initiator caspase-8 and -9 were activated upon exposure to RBL, inhibition of caspase-8 but not caspase-9 rescued cells from RBL-induced apoptosis. Mechanistic studies revealed that RBL induced cleavage of Bid, loss of mitochondrial membrane potential and activation of caspase-3. The expression of the anti-apoptotic proteins Bcl-2 and Bcl-X was down regulated without altering the expression of pro-apoptotic proteins--Bad and Bax. In contrast to leukemic cells, RBL did not induce apoptosis in normal PBMC, isolated CD3+ve cells and undifferentiated CD34+ve hematopoietic stem and progenitor cells (HSPCs). The findings highlight the differential effects of RBL on transformed and normal hematopoietic cells and suggest that RBL may be explored for therapeutic applications in leukemia.


Subject(s)
Apoptosis/drug effects , Caspase 8/metabolism , Lectins/pharmacology , Leukemia, T-Cell/metabolism , Leukocytes, Mononuclear/drug effects , Leukocytes, Mononuclear/metabolism , Rhizoctonia/chemistry , Antigens, CD34/metabolism , CD3 Complex/metabolism , Carbohydrate Metabolism , Cell Line, Tumor , Cell Proliferation/drug effects , Cell Survival/drug effects , Hematopoietic Stem Cells/drug effects , Hematopoietic Stem Cells/metabolism , Humans , Lectins/metabolism , Lectins/toxicity , Membrane Potential, Mitochondrial/drug effects , Proto-Oncogene Proteins c-bcl-2/metabolism , Signal Transduction/drug effects , T-Lymphocytes/drug effects , T-Lymphocytes/metabolism
20.
Biochim Biophys Acta ; 1828(9): 2230-7, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23756779

ABSTRACT

Bacillomycin L, a natural iturinic lipopeptide produced by Bacillus amyloliquefaciens, is characterized by strong antifungal activities against a variety of agronomically important filamentous fungi including Rhizoctonia solani Kühn. Prior to this study, the role of membrane permeabilization in the antimicrobial activity of bacillomycin L against plant pathogenic fungi had not been investigated. To shed light on the mechanism of this antifungal activity, the permeabilization of R. solani hyphae by bacillomycin L was investigated and compared with that by amphotericin B, a polyene antibiotic which is thought to act primarily through membrane disruption. Our results derived from electron microscopy, various fluorescent techniques and gel retardation experiments revealed that the antifungal activity of bacillomycin L may be not solely a consequence of fungal membrane permeabilization, but related to the interaction of it with intracellular targets. Our findings provide more insights into the mode of action of bacillomycin L and other iturins, which could in turn help to develop new or improved antifungal formulations or result in novel strategies to prevent fungal spoilage.


Subject(s)
Anti-Bacterial Agents/chemistry , Cell Membrane/chemistry , Hyphae/chemistry , Rhizoctonia/chemistry , Amphotericin B/chemistry , Amphotericin B/pharmacology , Anti-Bacterial Agents/pharmacology , Cell Membrane/drug effects , Cell Membrane Permeability , Dose-Response Relationship, Drug , Electrophoretic Mobility Shift Assay , Hyphae/drug effects , Microbial Sensitivity Tests , Microscopy, Electron , Peptides, Cyclic/chemistry , Peptides, Cyclic/pharmacology , Rhizoctonia/drug effects
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