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1.
J Pharm Biomed Anal ; 162: 264-271, 2019 Jan 05.
Article in English | MEDLINE | ID: mdl-30268994

ABSTRACT

In the mammalian brain, d-serine acts as a co-agonist at the glycine-binding site on the N-methyl-d-aspartate receptor. Because plasma d-serine levels are significantly lower in patients with schizophrenia than in healthy subjects, d-serine has been proposed as a potential therapeutic agent for schizophrenia treatment. However, d-serine has a nephrotoxic effect in rats at high doses. The purpose of this study was to investigate the relationship between the plasma kinetics of d-serine and nephrotoxicity in rats. We administered d-serine intravenously (iv), orally (po), or intraperitoneally (ip) to male Wistar rats, and performed gas chromatography-mass spectrometry to measure the plasma concentrations of d- and l-serine. After iv administration (0.1 mmol/kg body weight (bw)), plasma d-serine declined multiexponentially with an elimination t1/2 of 108 ± 16 min, and the total clearance was 7.9 ± 0.9 ml/min/kg bw. The oral bioavailability of d-serine was estimated to be 94 ± 27%. To evaluate the dose-response relationship of d-serine-induced kidney injury and the plasma kinetics of d-serine, we injected d-serine into rats ip in doses ranging from 0.6 to 4.8 mmol/kg bw. Twenty-four hours after d-serine administration, histological changes indicating renal damage were observed in the kidneys of rats who received d-serine at doses of 1.8-4.8 mmol/kg bw; the severity of the tubular injury increased with increasing d-serine dose. When the Cmax value of d-serine was approximately >2 µmol/ml, the plasma creatinine increased remarkably 24 h after d-serine administration. This suggests that the Cmax of d-serine could be a good predictor of d-serine-induced nephrotoxicity.


Subject(s)
Kidney Diseases/chemically induced , Kidney/drug effects , Serine/pharmacokinetics , Serine/toxicity , Administration, Oral , Animals , Biomarkers/blood , Creatinine/blood , Gas Chromatography-Mass Spectrometry , Injections, Intraperitoneal , Injections, Intravenous , Kidney/metabolism , Kidney/pathology , Kidney Diseases/blood , Kidney Diseases/pathology , Male , Rats, Wistar , Serine/administration & dosage , Serine/blood , Stereoisomerism , Toxicokinetics
2.
Microbiology (Reading) ; 163(11): 1664-1679, 2017 Nov.
Article in English | MEDLINE | ID: mdl-29034854

ABSTRACT

During conditions of nutrient limitation bacteria undergo a series of global gene expression changes to survive conditions of amino acid and fatty acid starvation. Rapid reallocation of cellular resources is brought about by gene expression changes coordinated by the signalling nucleotides' guanosine tetraphosphate or pentaphosphate, collectively termed (p)ppGpp and is known as the stringent response. The stringent response has been implicated in bacterial virulence, with elevated (p)ppGpp levels being associated with increased virulence gene expression. This has been observed in the highly pathogenic Francisella tularensis sub spp. tularensis SCHU S4, the causative agent of tularaemia. Here, we aimed to artificially induce the stringent response by culturing F. tularensis in the presence of the amino acid analogue l-serine hydroxamate. Serine hydroxamate competitively inhibits tRNAser aminoacylation, causing an accumulation of uncharged tRNA. The uncharged tRNA enters the A site on the translating bacterial ribosome and causes ribosome stalling, in turn stimulating the production of (p)ppGpp and activation of the stringent response. Using the essential virulence gene iglC, which is encoded on the Francisella pathogenicity island (FPI) as a marker of active stringent response, we optimized the culture conditions required for the investigation of virulence gene expression under conditions of nutrient limitation. We subsequently used whole genome RNA-seq to show how F. tularensis alters gene expression on a global scale during active stringent response. Key findings included up-regulation of genes involved in virulence, stress responses and metabolism, and down-regulation of genes involved in metabolite transport and cell division. F. tularensis is a highly virulent intracellular pathogen capable of causing debilitating or fatal disease at extremely low infectious doses. However, virulence mechanisms are still poorly understood. The stringent response is widely recognized as a diverse and complex bacterial stress response implicated in virulence. This work describes the global gene expression profile of F. tularensis SCHU S4 under active stringent response for the first time. Herein we provide evidence for an association of active stringent response with FPI virulence gene expression. Our results further the understanding of the molecular basis of virulence and regulation thereof in F. tularensis. These results also support research into genes involved in (p)ppGpp production and polyphosphate biosynthesis and their applicability as targets for novel antimicrobials.


Subject(s)
Adaptation, Biological/physiology , Francisella tularensis/physiology , Gene Expression Regulation, Bacterial/physiology , Genomic Islands/genetics , Transcriptome/physiology , Virulence/physiology , Bacterial Proteins/biosynthesis , Bacterial Proteins/genetics , Francisella tularensis/genetics , Francisella tularensis/pathogenicity , Gene Expression Regulation, Bacterial/genetics , Genes, Bacterial/genetics , Genes, Regulator/genetics , Genes, Regulator/physiology , Genomic Islands/physiology , High-Throughput Nucleotide Sequencing , Metabolic Networks and Pathways/genetics , Metabolic Networks and Pathways/physiology , Oxidative Stress/genetics , Oxidative Stress/physiology , Proteome/physiology , Sequence Analysis, RNA , Serine/analogs & derivatives , Serine/toxicity , Stress, Physiological , Transcriptional Activation/genetics , Transcriptional Activation/physiology , Transcriptome/genetics , Virulence/genetics
3.
Biotechnol Bioeng ; 113(4): 807-16, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26416585

ABSTRACT

L-serine is a widely used amino acid that has been proposed as a potential building block biochemical. The high theoretical yield from glucose makes a fermentation based production attractive. In order to achieve this goal, serine degradation to pyruvate and glycine in E. coli MG1655 was prevented by deletion of three L-serine deaminases sdaA, sdaB, and tdcG, as well as serine hydroxyl methyl transferase (SHMT) encoded by glyA. Upon overexpression of the serine production pathway, consisting of a feedback resistant version of serA along with serB and serC, this quadruple deletion strain showed a very high serine production yield (0.45 g/g glucose) during small-scale batch fermentation in minimal medium. Serine, however, was found to be highly toxic even at low concentrations to this strain, which lead to slow growth and production during fed batch fermentation, resulting in a serine production of 8.3 g/L. The production strain was therefore evolved by random mutagenesis to achieve increased tolerance towards serine. Additionally, overexpression of eamA, a cysteine/homoserine transporter was demonstrated to increase serine tolerance from 1.6 g/L to 25 g/L. During fed batch fermentation, the resulting strain lead to the serine production titer of 11.7 g/L with yield of 0.43 g/g glucose, which is the highest yield reported so far for any organism.


Subject(s)
Escherichia coli/genetics , Escherichia coli/metabolism , Metabolic Engineering/methods , Serine/metabolism , Biological Transport , Drug Tolerance , Escherichia coli/growth & development , Gene Deletion , Gene Expression , Metabolic Networks and Pathways/genetics , Mutation , Serine/toxicity
4.
Eur J Pharm Biopharm ; 93: 205-13, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25748796

ABSTRACT

This work aims at studying the efficacy of a series of novel biocompatible, serine-based surfactants as chemical permeation enhancers for two different local anesthetics, tetracaine and ropivacaine, combining an experimental and computational approach. The surfactants consist of gemini molecules structurally related, but with variations in headgroup charge (nonionic vs. cationic) and in the hydrocarbon chain lengths (main and spacer chains). In vitro permeation and molecular dynamics studies combined with cytotoxicity profiles were performed to investigate the permeation of both drugs, probe skin integrity, and rationalize the interactions at molecular level. Results show that these enhancers do not have significant deleterious effects on the skin structure and do not cause relevant changes on cell viability. Permeation across the skin is clearly improved using some of the selected serine-based gemini surfactants, namely the cationic ones with long alkyl chains and shorter spacer. This is noteworthy in the case of ropivacaine hydrochloride, which is not easily administered through the stratum corneum. Molecular dynamics results provide a mechanistic view of the surfactant action on lipid membranes that essentially corroborate the experimental observations. Overall, this study suggests the viability of these serine-based surfactants as suitable and promising delivery agents in pharmaceutical formulations.


Subject(s)
Amides/administration & dosage , Anesthetics, Local/administration & dosage , Serine/administration & dosage , Skin Absorption/drug effects , Skin/drug effects , Surface-Active Agents/administration & dosage , Tetracaine/administration & dosage , Administration, Cutaneous , Amides/chemistry , Amides/metabolism , Anesthetics, Local/chemistry , Anesthetics, Local/metabolism , Animals , Cells, Cultured , Chemistry, Pharmaceutical , Keratinocytes/drug effects , Keratinocytes/metabolism , Keratinocytes/ultrastructure , Kinetics , Microscopy, Electron, Scanning , Models, Biological , Molecular Dynamics Simulation , Molecular Structure , Permeability , Ropivacaine , Serine/analogs & derivatives , Serine/chemistry , Serine/toxicity , Skin/metabolism , Skin/ultrastructure , Structure-Activity Relationship , Surface-Active Agents/chemistry , Surface-Active Agents/toxicity , Swine , Technology, Pharmaceutical/methods , Tetracaine/chemistry , Tetracaine/metabolism
5.
Br J Pharmacol ; 170(5): 1053-63, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23962079

ABSTRACT

BACKGROUND AND PURPOSE: Available medications for chronic pain provide only partial relief and often cause unacceptable side effects. There is therefore a need for novel molecular targets to develop new therapeutics with improved efficacy and tolerability. Despite encouraging efficacy data in rodents with inhibitors of the neuronal glycine transporter-2 (GlyT2), there are also some reports of toxicity and their development was discontinued. EXPERIMENTAL APPROACH: In order to clarify the possibility of targeting GlyT2 for the treatment of pain, we have used an integrated approach comprising in vitro pharmacology, selectivity, bioavailability, in vivo efficacy and safety assessment to analyse the properties and efficacy of ALX-1393 and Org-25543, the two published GlyT2 inhibitors from which in vivo data are available. KEY RESULTS: We report that these compounds have a different set of undesirable properties that limit their usefulness as pharmacological tools. Importantly, we discover that inhibitors of GlyT2 can exert an apparent reversible or irreversible inhibition of the transporter and describe a new class of reversible GlyT2 inhibitors that preserves efficacy while avoiding acute toxicity. CONCLUSIONS AND IMPLICATIONS: Our pharmacological comparison of two closely related GlyT2 inhibitors with different modes of inhibition provides important insights into their safety and efficacy profiles, uncovering that in the presence of a GlyT2 mechanism-based toxicity, reversible inhibitors might allow a tolerable balance between efficacy and toxicity. These findings shed light into the drawbacks associated with the early GlyT2 inhibitors and describe a new mechanism that might serve as the starting point for new drug development.


Subject(s)
Analgesics/pharmacology , Benzamides/pharmacology , Brain/drug effects , Glycine Agents/pharmacology , Glycine Plasma Membrane Transport Proteins/antagonists & inhibitors , Pain/prevention & control , Serine/analogs & derivatives , Analgesics/toxicity , Animals , Benzamides/toxicity , Blood-Brain Barrier/drug effects , Blood-Brain Barrier/metabolism , Brain/metabolism , Brain/physiopathology , Capillary Permeability , Cell Line , Disease Models, Animal , Dose-Response Relationship, Drug , Formaldehyde , Glycine Agents/toxicity , Glycine Plasma Membrane Transport Proteins/metabolism , Humans , Membrane Potentials , Mice , Pain/chemically induced , Pain/metabolism , Pain/physiopathology , Pain Measurement , Pain Threshold/drug effects , Serine/pharmacology , Serine/toxicity , Transfection , Xenopus laevis
6.
Bioorg Med Chem Lett ; 22(22): 6882-7, 2012 Nov 15.
Article in English | MEDLINE | ID: mdl-23044370

ABSTRACT

A series of novel pyrazole peptidomimetics was synthesized from 3-aryl-1-arylmethyl-1H-pyrazole-5-carboxylic acid and amino acid ester. Structures of the compounds were characterized by means of IR, (1)H NMR and mass spectroscopy. Compounds 5e and 5k suppress effectively the growth of A549 lung cancer cells. Preliminary research on the mechanism of action showed that the inhibition might perform through combination of apoptosis, autophagy and cell cycle arrest.


Subject(s)
Antineoplastic Agents/chemical synthesis , Pyrazoles/chemistry , Pyrazoles/chemical synthesis , Serine/analogs & derivatives , Antineoplastic Agents/chemistry , Antineoplastic Agents/toxicity , Apoptosis/drug effects , Autophagy/drug effects , Carboxylic Acids/chemistry , Cell Line, Tumor , G1 Phase Cell Cycle Checkpoints/drug effects , Humans , Peptidomimetics , Pyrazoles/toxicity , Serine/chemical synthesis , Serine/chemistry , Serine/toxicity , Structure-Activity Relationship
7.
Drug Chem Toxicol ; 35(4): 393-8, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22486999

ABSTRACT

Inflammation is deleterious for organs with reduced capacity of regeneration, such as the brain. Recently, studies have focused on investigating the therapeutic effects of nonsteroidal anti-inflammatory drugs (NSAIDs) in Alzheimer's disease, Parkinson's disease, Huntington's disease, and multiple sclerosis. Excitotoxicity is the pathological process when receptors for the excitatory neurotransmitter glutamate, such as the N-methyl-D-aspartate (NMDA), receptors are overactivated. This process may be involved in neurodegenerative diseases. D-serine is one of the coagonist of NMDA receptors, and increased levels of D-serine are associated with excitotoxicity. In our study, the potential neuroprotective effects of mefenamic acid, acetaminophen, and naproxen sodium were investigated against D-serine-induced oxidative stress in the rat brain in vitro. To show their potential neuroprotective properties, NSAIDs were incubated with D-serine and reactive oxygen species (ROS), malondialdehyde, and protein carbonyl content of the brain after different treatments were measured. Our results demostrate that NSAIDs used in the present study significantly reduced ROS production, lipid peroxidation, and protein oxidation against D-serine treatment.


Subject(s)
Anti-Inflammatory Agents, Non-Steroidal/pharmacology , Inflammation/drug therapy , Neuroprotective Agents/pharmacology , Oxidative Stress/drug effects , Acetaminophen/pharmacology , Animals , Brain/drug effects , Brain/pathology , Inflammation/pathology , Lipid Peroxidation/drug effects , Malondialdehyde/metabolism , Mefenamic Acid/pharmacology , Naproxen/pharmacology , Protein Carbonylation/drug effects , Rats , Rats, Sprague-Dawley , Reactive Oxygen Species/metabolism , Receptors, N-Methyl-D-Aspartate/drug effects , Receptors, N-Methyl-D-Aspartate/metabolism , Serine/toxicity
8.
J Mass Spectrom ; 46(5): 502-7, 2011 May.
Article in English | MEDLINE | ID: mdl-21500319

ABSTRACT

D-Serine is a co-agonist of the N-methyl-D-aspartate receptor in glutamate neurotransmission and has been proposed as a potential therapeutic agent for schizophrenia. However, D-serine also acts as a nephrotoxic substance in rats at high doses. To investigate the pharmacokinetics and toxicokinetics of D-serine, a method for the stereoselective determination of serine enantiomers in rat plasma was developed using GC-MS with selected ion monitoring (GC-MS-SIM). DL-[(2)H(3)]Serine was used as an internal standard to account for losses associated with the extraction, derivatization and chromatography. Serine enantiomers were purified by cation-exchange chromatography using BondElut SCX cartridge and derivatized with HCl in methanol to form methyl ester followed by subsequent N,O-diacylation with optically active (+)-α-methoxy-α-trifluoromethylphenylacetyl chloride to form epimeric amide. Quantitation was performed by SIM of the molecular-related ions of the epimers in the chemical ionization mode. The intra- and inter-day reproducibility of the assay was less than 5% for D-serine and 3% for L-serine. The method was successively applied to study the pharmacokinetics of D-serine in rats.


Subject(s)
Gas Chromatography-Mass Spectrometry/methods , Phenylacetates/chemistry , Serine/blood , Animals , Chromatography, Ion Exchange , Deuterium/analysis , Deuterium/chemistry , Isotope Labeling , Male , Rats , Rats, Sprague-Dawley , Reproducibility of Results , Sensitivity and Specificity , Serine/chemistry , Serine/pharmacokinetics , Serine/toxicity , Stereoisomerism
9.
Drug Chem Toxicol ; 34(2): 129-38, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21314463

ABSTRACT

D-serine plays a significant role in neuronal activity, including learning, memory, neuronal migration at developmental stages, and cell-death signaling. It has been also suggested that D-serine can potantiate the neurotoxicity induced by N-methyl-D-aspartate (NMDA) receptor activation due to its coagonist function. However, little is known about the role of D-serine in oxidative stress mechanisms. The aim of this study was to determine the possible neurotoxic or oxidative effects of the dose- (50-200 mg/kg) and time-dependent (2 or 6 hours) D-serine administration on lipid, protein, DNA, mitochondrial integrity (i.e., function), levels of antioxidant enzyme activities (e.g., catalase, glutathione peroxidase, and superoxide dismutase), and glutathione (GSH) in the rat brain. Our results showed that D-serine significantly increases the levels of lipid peroxidation, protein carbonyls, and DNA damage. In addition, D-serine treatment changes cellular antioxidant status due to the decreased levels of antioxidant enzymes, GSH, and mitochondrial function. Therefore, it is concluded that the regulation of D-serine levels in the brain may be an important target for the development of neuroprotective strategies against neurodegenerative processes where excitotoxicity is involved.


Subject(s)
Brain/drug effects , Oxidants/toxicity , Oxidative Stress/drug effects , Serine/toxicity , Animals , Brain/metabolism , Cell Fractionation , DNA/drug effects , DNA Damage , Dose-Response Relationship, Drug , Lipid Peroxidation/drug effects , Malondialdehyde/metabolism , Mitochondria/drug effects , Mitochondria/metabolism , Oxidative Stress/physiology , Oxidoreductases/metabolism , Rats , Rats, Sprague-Dawley , Synaptosomes/drug effects
10.
FEBS Lett ; 585(4): 623-9, 2011 Feb 18.
Article in English | MEDLINE | ID: mdl-21219901

ABSTRACT

Moderate lysosomal membrane permeabilization (LMP) is an important inducer of apoptosis. Macrophages are professional scavengers and are rich in hydrolytic enzymes and iron. In the present study, we found that LMP by lysosomotropic detergent MSDH resulted in early up-regulation of lysosomal cathepsins, oxidative stress and ferritin up-regulation, and cell death. Lysosomotropic base NH(4)Cl reduced the ferritin induction and oxidative stress in apoptotic cells induced by MSDH. Cysteine cathepsin inhibitors significantly protected cell death and oxidative stress, but had less effect on ferritin induction. We conclude that oxidative stress induced by lysosomal rupture causes ferritin induction with concomitant mitochondrial damage, which are the potential target for prevention of cellular oxidative stress and cell death induced by typical lysosomotropic substances in different disorders.


Subject(s)
Ferritins/metabolism , Intracellular Membranes/drug effects , Lysosomes/drug effects , Macrophages/drug effects , Macrophages/metabolism , Oxidative Stress/drug effects , Up-Regulation/drug effects , Alkalies/pharmacology , Amides/toxicity , Animals , Apoptosis/drug effects , Cathepsins/antagonists & inhibitors , Cathepsins/metabolism , Cell Line , Detergents/toxicity , Humans , Lysosomes/enzymology , Macrophages/pathology , Mice , Mitochondria/drug effects , Permeability/drug effects , RNA, Messenger/metabolism , Serine/analogs & derivatives , Serine/toxicity , Serine Proteinase Inhibitors/pharmacology , Time Factors
11.
Food Chem Toxicol ; 48(8-9): 2193-9, 2010.
Article in English | MEDLINE | ID: mdl-20488221

ABSTRACT

N-Acetyl-L-serine (NAS) is a component of dietary proteins and a minor constituent of foods as a free amino acid. The current paper reports the outcome of toxicology studies conducted to assess the safety of NAS. No evidence of mutagenicity was observed in the reverse bacterial mutation assay. Genotoxicity was not observed in the bone marrow micronucleus assay conducted in mice. No mortalities or evidence of adverse effects were observed in Sprague-Dawley (SD) rats following acute oral administration at a dose of 2000 mg of NAS/kg of body weight. Similarly, no evidence of adverse effects was observed in SD rats following repeated dose dietary exposure (28-days) to targeted doses of 100, 500, or 1000 mg of NAS/kg of body weight/day. All rats survived until scheduled sacrifice and no biologically significant differences were observed in any of the response variables from the NAS exposure groups compared with untreated control groups. Based on these results, NAS does not represent a risk for mutagenicity or genotoxicity, is not acutely toxic, and the no-observed-adverse-effect-level (NOAEL) for systemic toxicity from repeated dose dietary exposure to NAS is 839.7 and 893.6 mg of NAS/kg of body weight/day for male and female rats, respectively.


Subject(s)
Mutagens , Serine/analogs & derivatives , Animals , Blood Cell Count , Blood Chemical Analysis , Blood Coagulation , Body Weight/drug effects , Bone Marrow Cells , Diet , Dose-Response Relationship, Drug , Eating , Erythrocytes/drug effects , Female , Male , Mice , Mice, Inbred ICR , Micronucleus Tests , Mutagenicity Tests , No-Observed-Adverse-Effect Level , Organ Size/drug effects , Rats , Rats, Sprague-Dawley , Serine/toxicity
12.
Food Chem Toxicol ; 47(9): 2356-60, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19559067

ABSTRACT

A subchronic oral toxicity study was conducted to evaluate the safety of L-serine in Sprague-Dawley rats. The test article was administered once daily by gavage in male and female rats at dose levels of 0, 500, 1500, and 3000 mg/kg body weight/day for 13 weeks. Daily clinical signs, body weight, and food consumption were not affected by ingestion of the test article. There were no treatment-related adverse effects on urinalysis, hematology, serum biochemistry, organ weights, gross and histopathological examination. It was concluded that the no-observed-effect level (NOEL) for L-serine was 3000 mg/kg bw/day for both genders.


Subject(s)
Food Additives/toxicity , Serine/toxicity , Administration, Oral , Animals , Blood Chemical Analysis , Body Weight/drug effects , Eating/drug effects , Female , Hematologic Tests , Longevity/drug effects , Male , No-Observed-Adverse-Effect Level , Organ Size/drug effects , Rats , Rats, Sprague-Dawley , Urinalysis
13.
Bioorg Med Chem Lett ; 19(7): 1896-8, 2009 Apr 01.
Article in English | MEDLINE | ID: mdl-19269172

ABSTRACT

The artificial actin-depolymerizing compounds 3-6, based on aplyronine A, an actin-depolymerizing antitumor marine macrolide, were synthesized, and their actin-depolymerizing activities and cytotoxicities were evaluated.


Subject(s)
Actins/antagonists & inhibitors , Lactones/chemical synthesis , Macrolides/chemical synthesis , Serine/analogs & derivatives , Actins/metabolism , Cell Line , HeLa Cells , Humans , Lactones/chemistry , Lactones/toxicity , Macrolides/chemistry , Macrolides/toxicity , Serine/chemical synthesis , Serine/chemistry , Serine/toxicity
14.
Toxicology ; 243(1-2): 177-92, 2008 Jan 14.
Article in English | MEDLINE | ID: mdl-18061331

ABSTRACT

Renal toxicity can commonly occur after exposure to xenobiotics, pharmaceutical agents or environmental pollutants. Changes in the gene expression in kidney parenchymal cells that precede and/or accompany renal injury may be hallmark critical events in the onset of pathologic changes of renal functions. Over the last several years, transcriptomic analysis has evolved to enable simultaneous analysis of the expression profiles of tens of thousands of genes in response to various endogenous and exogenous stimuli. In this study, we investigated gene expression changes in the kidney after acute exposure to a nephrotoxin, D-serine, which targets the proximal tubule of the kidney. Male F-344 rats injected intraperitoneally with a single dose of D-serine (5, 20, 50, 200 or 500 mg/kg), and gene expression profiles in the kidney were determined using the Affymetrix RAE230A gene arrays at 96 h post-dosing. D-serine treatment resulted in the up- and down-regulation of 1158 and 749 genes, respectively, over the entire dose range based on the intersection of the results of t-test, p<0.01 over two consecutive doses, and ANOVA with Bonferonni correction for multiple testing. Interestingly, both the up-and down-regulated genes show a unified dose response pattern as revealed in the self-organized map clustering analysis using the expression profiles of the 1907 differentially expressed genes as input data. There appears to be minimal changes in the expression level of these genes in the dose range of 5-50 mg/kg, while the most prominent changes were observed at the highest doses tested, i.e. 200 and 500 mg/kg. Pathway analysis of the differentially expressed genes showed perturbation of a large number of biological processes/pathways after d-serine exposure. Among the up-regulated pathways are actin cytoskeleton biogenesis and organization, apoptosis, cell cycle regulation, chromatin assembly, excision repair of damaged DNA, DNA replication and packaging, protein biosynthesis, metabolism and transport, inflammatory response, proteasome-mediated degradation of oxidatively damaged cytosolic proteins, Ras protein signal transduction, TGF-beta signaling pathway and mRNA transcription, processing, splicing and transport. On the other hand, major metabolic pathways, which include carbohydrate metabolism, TCA cycle, oxidative phosphorylation, ATP synthesis coupled electron transport, amino acid metabolism and transport, lipid metabolism, nucleotide metabolism, and vitamin metabolism, and oxidative stress response including induction of antioxidant genes and glutathione metabolism are down-regulated. As tubular epithelia have strong energy demand for normal functions, down-regulation of energy metabolism after D-serine treatment may be related to the mechanism of its nephrotoxicity. In addition, hydrogen peroxide, a reactive oxygen species, is produced as a byproduct of the metabolism of D-serine by D-amino acid oxidase in the peroxisomes of the tubular epithelia. Down-regulation of pathways for antioxidant genes induction and glutathione metabolism will likely exacerbate the cytotoxicity of this reactive oxygen species. The observation that the genes involved in apoptosis, DNA repair, proteasome pathway for the degradation of oxidatively damaged cytosolic proteins were up-regulated lends some supports to this premise. Up-regulation of pathways of cell proliferation cycle, DNA replication and gene expression process, including mRNA transcription, processing, splicing, transport, translation initiation, and protein transport along with protein complex assembly, suggests ongoing tissue repair and regeneration. Consistent with the fibrogenic function of the TGF-beta signaling pathway in various experimental renal diseases, genes encoding major extracellular matrix components such as collagens, laminins, fibronectin 1 and tenascins are also strongly up-regulated. Taken together, the results of this study provide important insights into the molecular mechanism of D-serine nephrotoxicity, as well as the activation of specific cellular pathways in response to this toxic insult.


Subject(s)
Energy Metabolism/drug effects , Gene Expression/drug effects , Kidney , Oxidative Stress/drug effects , Serine/toxicity , Animals , Cluster Analysis , Dose-Response Relationship, Drug , Down-Regulation , Energy Metabolism/genetics , Fibrosis , Gene Expression Profiling , Kidney/drug effects , Kidney/metabolism , Kidney/pathology , Kidney Function Tests , Male , Oligonucleotide Array Sequence Analysis , Oxidative Stress/genetics , Rats , Rats, Inbred F344 , Serine/chemistry , Stereoisomerism , Up-Regulation
15.
Am J Physiol Renal Physiol ; 293(1): F382-90, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17429029

ABSTRACT

D-Serine selectively causes necrosis of S(3) segments of proximal tubules in rats. This leads to aminoaciduria and glucosuria. Coinjection of the nonmetabolizable amino acid alpha-aminoisobutyric acid (AIB) prevents the tubulopathy. D-serine is selectively reabsorbed in S(3), thereby gaining access to peroxisomal D-amino acid oxidase (D-AAO). D-AAO-mediated metabolism produces reactive oxygen species. We determined the fractional excretion of amino acids and glucose in rats after intraperitoneal injection of d-serine alone or together with reduced glutathione (GSH) or AIB. Both compounds prevented the hyperaminoaciduria. We measured GSH concentrations in renal tissue before (control) and after D-serine injection and found that GSH levels decreased to approximately 30% of control. This decrease was prevented when equimolar GSH was coinjected with D-serine. To find out why AIB protected the tubule from D-serine toxicity, we microinfused D-[(14)C]serine or [(14)C]AIB (0.36 mmol/l) together with [(3)H]inulin in late proximal tubules in vivo and measured the radioactivity in the final urine. Fractional reabsorption of D-[(14)C]serine and [(14)C]AIB amounted to 55 and 70%, respectively, and 80 mmol/l of AIB or D-serine mutually prevented reabsorption to a great extent. D-AAO activity measured in vitro (using D-serine as substrate) was not influenced by a 10-fold higher AIB concentration. We conclude from these results that 1) D-AAO-mediated d-serine metabolism lowers renal GSH concentrations and thereby provokes tubular damage because reduction of reactive oxygen species by GSH is diminished and 2) AIB prevents d-serine-induced tubulopathy by inhibition of D-serine uptake in S(3) segments rather than by interfering with intracellular D-AAO-mediated D-serine metabolism.


Subject(s)
Aminoisobutyric Acids/therapeutic use , Kidney Diseases/chemically induced , Kidney Diseases/prevention & control , Serine/toxicity , Amino Acids/blood , Animals , D-Amino-Acid Oxidase/antagonists & inhibitors , Dose-Response Relationship, Drug , Glucose/metabolism , Glutathione/metabolism , Glycosuria/chemically induced , Hydrogen Peroxide/metabolism , Injections, Intraperitoneal , Insulin , Kidney/drug effects , Kidney/metabolism , Kidney Diseases/pathology , Kidney Tubules, Proximal/cytology , Kidney Tubules, Proximal/drug effects , Kidney Tubules, Proximal/metabolism , Loop of Henle/drug effects , Loop of Henle/metabolism , Male , Oxidation-Reduction , Rats , Rats, Wistar , Serine/administration & dosage , Serine/metabolism
16.
Toxicology ; 229(1-2): 123-35, 2007 Jan 05.
Article in English | MEDLINE | ID: mdl-17110013

ABSTRACT

It has been suggested that oxidative stress is involved in d-serine-induced nephrotoxicity. The purpose of this study was to assess if oxidative stress is involved in this experimental model using several approaches including (a) the determination of several markers of oxidative stress and the activity of some antioxidant enzymes in kidney and (b) the use of compounds with antioxidant or prooxidant effects. Rats were sacrificed at several periods of time (from 3 to 24h) after a single i.p. injection of d-serine (400mg/kg). Control rats were injected with l-serine (400mg/kg) and sacrificed 24h after. The following markers were used to assess the temporal aspects of renal damage: (a) urea nitrogen (BUN) and creatinine in blood serum, (b) kidney injury molecule (KIM-1) mRNA levels, and (c) tubular necrotic damage. In addition, creatinine clearance, proteinuria, and urinary excretion of N-acetyl-beta-d-glucosaminidase (NAG) were measured 24h after d-serine injection. Protein carbonyl content, malondialdehyde (MDA), 4-hydroxy-2-nonenal (4-HNE), fluorescent products of lipid peroxidation, reactive oxygen species (ROS), glutathione (GSH) content, and heme oxygenase-1 (HO-1) expression were measured as markers of oxidative stress in the kidney. Additional experiments were performed using the following compounds with antioxidant or pro-oxidant effects before d-serine injection: (a) alpha-phenyl-tert-butyl-nitrone (PBN), a spin trapping agent; (b) 5,10,15,20-tetrakis (4-sulfonatophenyl) porphyrinato iron(III) (FeTPPS), a soluble complex able to metabolize peroxynitrite; (c) aminotriazole (ATZ), a catalase (CAT) inhibitor; (d) stannous chloride (SnCl(2)), an HO-1 inductor; (e) tin mesoporphyrin (SnMP), an HO inhibitor. In the time-course study, serum creatinine and BUN increased significantly on 15-24 and 20-24h, respectively, and KIM-1 mRNA levels increased significantly on 6-24h. Histological analyses revealed tubular necrosis at 12h. The activity of antioxidant enzymes catalase, superoxide dismutase, glutathione peroxidase, and glutathione reductase remained unchanged at all times studied. Protein carbonyl content, MDA, 4-HNE, and ROS remained unchanged at all time-points studied. GSH content decreased transiently on 9 and 12h. Interestingly, fluorescent products of lipid peroxidation decreased significantly on 3-24h. HO-1 expression was undetectable by Western blot and the immunohistochemistry studies revealed that the intensity of HO-1 staining was weak. The administration of PBN, FeTPPS, ATZ, SnCl(2), and SnMP did not prevent or enhance renal damage induced by d-serine. Our data taken as a whole suggest that oxidative stress is not involved in the early phase of the nephrotoxicity induced by d-serine.


Subject(s)
Kidney Diseases/chemically induced , Oxidative Stress , Serine/toxicity , Acetylglucosaminidase/urine , Amitrole/pharmacology , Animals , Antioxidants/metabolism , Blotting, Western , Catalase/antagonists & inhibitors , Catalase/metabolism , Cell Adhesion Molecules/genetics , Cell Adhesion Molecules/metabolism , Creatinine/blood , Dose-Response Relationship, Drug , Kidney Diseases/blood , Kidney Diseases/urine , Lipid Peroxidation/drug effects , Male , Malondialdehyde/chemistry , Malondialdehyde/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism , Metalloporphyrins/pharmacology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Rats , Rats, Sprague-Dawley , Reproducibility of Results , Reverse Transcriptase Polymerase Chain Reaction , Serine/administration & dosage , Serine/chemistry , Stereoisomerism , Tin Compounds/pharmacology , Toxicity Tests/methods
17.
Neurochem Int ; 48(8): 739-45, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16458390

ABSTRACT

L-serine-O-sulphate is a member of a group of amino acids collectively called gliotoxins and is a substrate for the high affinity sodium-dependent glutamate transporters. Previous studies have shown that it is toxic to primary cultures of astrocytes but the mode of toxicity is unknown. The current study demonstrates that L-serine-O-sulphate, at a sub-toxic concentration (400 microM), causes significant disruption to glucose and alanine metabolism in cultures of rat cortical astrocytes. More specifically, using (13)C NMR spectroscopy a significant reduction in labelled end products from [1-(13)C]glucose and [3-(13)C]alanine was found in the presence of L-serine-O-sulphate. Additionally, using [2-(13)C]glycine a 27% reduction in de novo glutathione synthesis was observed in the presence of the gliotoxin. Incubation of the cells with L-serine-O-sulphate reduced the activity of alanine and aspartate aminotransferase by 53% and 67%, respectively. Collectively these results show that the gliotoxin, L-serine-O-sulphate, causes major disruptions to metabolic pathways in primary cultures of astrocytes.


Subject(s)
Astrocytes/drug effects , Astrocytes/metabolism , Central Nervous System/drug effects , Central Nervous System/metabolism , Energy Metabolism/drug effects , Serine/analogs & derivatives , Alanine/metabolism , Alanine Transaminase/antagonists & inhibitors , Alanine Transaminase/metabolism , Animals , Animals, Newborn , Aspartate Aminotransferases/antagonists & inhibitors , Aspartate Aminotransferases/metabolism , Carbon Radioisotopes , Cells, Cultured , Central Nervous System/physiopathology , Cerebral Cortex/drug effects , Cerebral Cortex/metabolism , Cerebral Cortex/physiopathology , Down-Regulation/drug effects , Down-Regulation/physiology , Energy Metabolism/physiology , Glucose/metabolism , Glutathione/metabolism , Lathyrism/chemically induced , Lathyrism/metabolism , Lathyrism/physiopathology , Neurotoxins/toxicity , Nuclear Magnetic Resonance, Biomolecular , Rats , Rats, Wistar , Serine/toxicity
18.
Chem Res Toxicol ; 18(11): 1678-82, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16300376

ABSTRACT

D-serine is nephrotoxic in rats. Based on circumstantial evidence, it has been suspected that D-amino-acid oxidase is involved in this nephrotoxicity. Since we found that LEA/SENDAI rats lacked D-amino-acid oxidase, we examined whether this enzyme was associated with D-serine-induced nephrotoxicity using the LEA/SENDAI rats and control F344 rats. When d-propargylglycine, which is known to have a nephrotoxic effect through its metabolism by D-amino-acid oxidase, was injected intraperitoneally into the F344 rats, it caused glucosuria and polyuria. However, injection of d-propargylglycine into LEA/SENDAI rats did not cause any glucosuria or polyuria, indicating that D-amino-acid oxidase is definitely not functional in these rats. D-serine was then injected into the F344 and LEA/SENDAI rats. It caused glucosuria and polyuria in the F344 rats but not in the LEA/SENDAI rats. These results indicate clearly that D-amino-acid oxidase is responsible for the D-serine-induced nephrotoxicity.


Subject(s)
D-Amino-Acid Oxidase/physiology , Kidney/drug effects , Serine/toxicity , Alkynes/toxicity , Animals , Glycine/analogs & derivatives , Glycine/toxicity , Glycosuria/chemically induced , Male , Rats , Rats, Inbred F344 , Species Specificity
19.
J Neurosci ; 25(41): 9413-7, 2005 Oct 12.
Article in English | MEDLINE | ID: mdl-16221850

ABSTRACT

D-serine occurs at high levels in the brain, where it is an endogenous coagonist at the "glycine site" of NMDA receptors. However, D-serine action has not been previously compared with that of endogenous glycine, and the relative importance of the two coagonists remains unclear. We now investigated the efficiencies of the two coagonists in mediating NMDA receptor neurotoxicity in organotypic hippocampal slices. Removal of endogenous D-serine from slices was achieved by pretreating the tissue with recombinant D-serine deaminase enzyme. This enzyme is several orders of magnitude more efficient than previous methods to remove D-serine. We report that complete removal of D-serine virtually abolished NMDA-elicited neurotoxicity but did not protect against kainate. Although levels of glycine were 10-fold higher than D-serine, endogenous glycine was ineffective in mediating NMDA receptor neurotoxicity. The effect of endogenous glycine could be observed only after simultaneous removal of endogenous D-serine and blockage of the glycine transporter GlyT1. Our data indicate that D-serine is the dominant coagonist for NMDA receptor-elicited neurotoxicity, mediating all cell death elicited by NMDA in organotypic slices. The results suggest an essential role for this unusual D-amino acid, with implications for the mechanism of neuronal death in the nervous system.


Subject(s)
Excitatory Amino Acid Agonists/toxicity , Hippocampus/drug effects , Hippocampus/physiology , Receptors, N-Methyl-D-Aspartate/agonists , Receptors, N-Methyl-D-Aspartate/physiology , Serine/toxicity , Animals , N-Methylaspartate/toxicity , Organ Culture Techniques , Rats , Rats, Sprague-Dawley , Serine/physiology
20.
Toxicology ; 207(2): 179-90, 2005 Feb 14.
Article in English | MEDLINE | ID: mdl-15596249

ABSTRACT

HPLC-MS-based metabonomic analysis was used to investigate urinary metabolic perturbations associated with D-serine-induced nephrotoxicity. D-Serine causes selective necrosis of the proximal straight tubules in the rat kidney accompanied by aminoaciduria, proteinuria and glucosuria. Alderely Park (Wistar-derived) rats were dosed with either D-serine (250 mg/kg ip) or vehicle (deionised water) and urine was collected at 0-12, 12-24, 24-36 and 36-48 h post-dosing. Samples were analysed using a Waters Alliance HT 2795 HPLC system coupled to a Waters Micromass Q-ToF-micro equipped with an electrospray source operating in either positive or negative ion mode. Changes to the urinary profile were detected at all time points compared to control. In negative ion mode, increases were observed in serine (m/z=103.0077), m/z=104.0376 (proposed to be hydroxypyruvate) and glycerate (m/z=105.0215), the latter being metabolites of D-serine. Furthermore, an increase in tryptophan, phenylalanine and lactate and decreases in methylsuccinic acid and sebacic acid were observed. Positive ion analysis revealed a decrease in xanthurenic acid, which has previously been assigned and reported using HPLC-MS following exposure to mercuric chloride and cyclosporine A. A general aminoaciduria, including proline, methionine, leucine, tyrosine and valine was also observed as well as an increase in acetyl carnitine. Investigation of additional metabolites altered as a result of exposure to D-serine is on-going. Thus, HPLC-MS-based metabonomic analysis has provided information concerning the mechanism of D-serine-induced renal injury.


Subject(s)
Kidney Tubular Necrosis, Acute/metabolism , Kidney/drug effects , Serine/metabolism , Animals , Chromatography, High Pressure Liquid , Glycosuria/chemically induced , Kidney/metabolism , Kidney/pathology , Kidney Tubular Necrosis, Acute/chemically induced , Kidney Tubular Necrosis, Acute/pathology , Male , Proteinuria/chemically induced , Rats , Rats, Inbred Strains , Renal Aminoacidurias/chemically induced , Serine/toxicity , Serine/urine , Spectrometry, Mass, Electrospray Ionization
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