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1.
Molecules ; 29(8)2024 Apr 20.
Article in English | MEDLINE | ID: mdl-38675702

ABSTRACT

The goal of this study was to apply the principles of analytical quality by design (AQbD) to the analytical method for determining the radiochemical purity (PQR) of the radiopharmaceutical sodium iodide 131I oral solution, utilizing thin-layer chromatography (TLC) with a radio-TLC scanner, which also enables the evaluation of product quality. For AQbD, the analytical target profile (ATP), critical quality attributes (CQA), risk management, and the method operable design region (MODR) were defined through response surface methodology to optimize the method using MINITAB® 19 software. This study encompassed the establishment of a control strategy and the validation of the method, including the assessment of selectivity, linearity, precision, robustness, detection limit, quantification limit, range, and the stability of the sample solution. Under the experimental conditions, the method parameters of the TLC scanner were experimentally demonstrated and optimized with an injection volume of 3 µL, a radioactive concentration of 10 mCi/mL, and a carrier volume of 40 µL. Statistical analysis confirmed the method's selectivity for the 131I iodide band Rf of 0.8, a radiochemical impurity IO3- Rf of 0.6, a linearity from 6.0 to 22.0 mCi/mL, and an intermediate precision with a global relative standard deviation (RSD) of 0.624%. The method also exhibited robustness, with a global RSD of 0.101%, a detection limit of 0.09 mCi/mL, and a quantification limit of 0.53 Ci/mL, meeting the prescribed range and displaying stability over time (at 0, 2, and 20 h) with a global RSD of 0.362%, resulting in consistent outcomes. The development of a method based on AQbD facilitated the creation of a design space and an operational space, with comprehensive knowledge of the method's characteristics and limitations. Additionally, throughout all operations, compliance with the acceptance criteria was verified. The method's validity was confirmed under the established conditions, making it suitable for use in the manufacturing process of sodium iodide 131I and application in nuclear medicine services.


Subject(s)
Iodine Radioisotopes , Radiopharmaceuticals , Sodium Iodide , Chromatography, Thin Layer/methods , Radiopharmaceuticals/chemistry , Radiopharmaceuticals/analysis , Iodine Radioisotopes/analysis , Sodium Iodide/chemistry , Administration, Oral , Reproducibility of Results
2.
Med Phys ; 51(7): 4696-4708, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38569052

ABSTRACT

BACKGROUND: Gamma camera imaging, including single photon emission computed tomography (SPECT), is crucial for research, diagnostics, and radionuclide therapy. Gamma cameras are predominantly based on arrays of photon multipliers tubes (PMTs) that read out NaI(Tl) scintillation crystals. In this way, standard gamma cameras can localize É£-rays with energies typically ranging from 30 to 360 keV. In the last decade, there has been an increasing interest towards gamma imaging outside this conventional clinical energy range, for example, for theragnostic applications and preclinical multi-isotope positron emission tomography (PET) and PET-SPECT. However, standard gamma cameras are typically equipped with 9.5 mm thick NaI(Tl) crystals which can result in limited sensitivity for these higher energies. PURPOSE: Here we investigate to what extent thicker scintillators can improve the photopeak sensitivity for higher energy isotopes while attempting to maintain spatial resolution. METHODS: Using Monte Carlo simulations, we analyzed multiple PMT-based configurations of gamma detectors with monolithic NaI (Tl) crystals of 20 and 40 mm thickness. Optimized light guide thickness together with 2-inch round, 3-inch round, 60 × 60 mm2 square, and 76 × 76 mm2 square PMTs were tested. For each setup, we assessed photopeak sensitivity, energy resolution, spatial, and depth-of-interaction (DoI) resolution for conventional (140 keV) and high (511 keV) energy É£ using a maximum-likelihood algorithm. These metrics were compared to those of a "standard" 9.5 mm-thick crystal detector with 3-inch round PMTs. RESULTS: Estimated photopeak sensitivities for 511 keV were 27% and 53% for 20 and 40 mm thick scintillators, which is respectively, 2.2 and 4.4 times higher than for 9.5 mm thickness. In most cases, energy resolution benefits from using square PMTs instead of round ones, regardless of their size. Lateral and DoI spatial resolution are best for smaller PMTs (2-inch round and 60 × 60 mm2 square) which outperform the more cost-effective larger PMT setups (3-inch round and 76 × 76 mm2 square), while PMT layout and shape have negligible (< 10%) effect on resolution. Best spatial resolution was obtained with 60 × 60 mm2 PMTs; for 140 keV, lateral resolution was 3.5 mm irrespective of scintillator thickness, improving to 2.8 and 2.9 mm for 511 keV with 20 and 40 mm thick crystals, respectively. Using the 3-inch round PMTs, lateral resolutions of 4.5 and 3.9 mm for 140 keV and of 3.5 and 3.7 mm for 511 keV were obtained with 20 and 40 mm thick crystals respectively, indicating a moderate performance degradation compared to the 3.5 and 2.9 mm resolution obtained by the standard detector for 140 and 511 keV. Additionally, DoI resolution for 511 keV was 7.0 and 5.6 mm with 20 and 40 mm crystals using 60 × 60 mm2 square PMTs, while with 3-inch round PMTs 12.1 and 5.9 mm were obtained. CONCLUSION: Depending on PMT size and shape, the use of thicker scintillator crystals can substantially improve detector sensitivity at high gamma energies, while spatial resolution is slightly improved or mildly degraded compared to standard crystals.


Subject(s)
Gamma Cameras , Monte Carlo Method , Sodium Iodide , Sodium Iodide/chemistry , Light , Scintillation Counting/instrumentation , Photons
3.
Angew Chem Int Ed Engl ; 60(6): 3008-3015, 2021 02 08.
Article in English | MEDLINE | ID: mdl-33185916

ABSTRACT

The PtII linker [ethylenediamineplatinum(II)]2+ , coined Lx, has emerged as a novel non-conventional approach to antibody-drug conjugates (ADCs) and has shown its potential in preclinical in vitro and in vivo benchmark studies. A crucial improvement of the Lx conjugation reaction from initially <15 % to ca. 75-90 % conjugation efficiency is described, resulting from a systematic screening of all relevant reaction parameters. NaI, a strikingly simple inorganic salt additive, greatly improves the conjugation efficiency as well as the conjugation selectivity simply by exchanging the leaving chloride ligand on Cl-Lx-drug complexes (which are direct precursors for Lx-ADCs) for iodide, thus generating I-Lx-drug complexes as more reactive species. Using this iodide effect, we developed a general and highly practical conjugation procedure that is scalable: our lead Lx-ADC was produced on a 5 g scale with an outstanding conjugation efficiency of 89 %.


Subject(s)
Antibodies, Monoclonal/chemistry , Coordination Complexes/chemistry , Immunoconjugates/chemistry , Platinum/chemistry , Animals , Cell Line, Tumor , Deferoxamine/chemistry , Humans , Immunoconjugates/blood , Immunoconjugates/metabolism , Immunoconjugates/therapeutic use , Mice , Neoplasms/drug therapy , Neoplasms/metabolism , Neoplasms/pathology , Receptor, ErbB-2/immunology , Sodium Iodide/chemistry , Tissue Distribution , Transplantation, Heterologous , Trastuzumab/chemistry , Trastuzumab/immunology , Trastuzumab/therapeutic use
4.
Phys Chem Chem Phys ; 22(22): 12644-12650, 2020 Jun 14.
Article in English | MEDLINE | ID: mdl-32458929

ABSTRACT

The effects of salts on protein systems are not yet fully understood. We investigated the ionic dynamics of three halide salts (NaI, NaBr, and NaCl) with two protein models, namely poly(N-isopropylacrylamide) (PNIPAM) and poly(N,N-diethylacrylamide) (PDEA), using multinuclear NMR, dispersion corrected density functional theory (DFT-D) calculations and dynamic light scattering (DLS) methods. The variation in ionic line-widths and chemical shifts induced by the polymers clearly illustrates that anions rather than cations interact directly with the polymers. From the variable temperature measurements of the NMR transverse relaxation rates of anions, which characterize the polymer-anion interaction intensities, the evolution behaviors of Cl-/Br-/I- during phase transitions are similar in each polymer system but differ between the two polymer systems. The NMR transverse relaxation rates of anions change synchronously with the phase transition of PNIPAM upon heating, but they drop rapidly and vanish about 3-4.5 °C before the phase transition of PDEA. By combining the DFT-D and DLS data, the relaxation results imply that anions escape from the interacting sites with PDEA prior to full polymer dehydration or collapse, which can be attributed to the lack of anion-NH interactions. The different dynamic evolutions of the anions in the PNIPAM and PDEA systems give us an important clue for understanding the micro-mechanism of protein folding in a complex salt aqueous solvent.


Subject(s)
Acrylamides/chemistry , Acrylic Resins/chemistry , Density Functional Theory , Polymers/chemistry , Proteins/chemistry , Bromides/chemistry , Dynamic Light Scattering , Models, Molecular , Sodium Chloride/chemistry , Sodium Compounds/chemistry , Sodium Iodide/chemistry , Temperature
5.
Chem Commun (Camb) ; 56(16): 2495-2498, 2020 Feb 25.
Article in English | MEDLINE | ID: mdl-32003367

ABSTRACT

Herein, we report the photocatalytic decarboxylative alkenylation reactions of N-(acyloxy)phthalimide derived from α-amino and α-hydroxy acids with 1,1-diarylethene, and with cinnamic acid derivatives through double decarboxylation, using sodium iodide and triphenylphosphine as redox catalysts. The reaction proceeds under mild irradiation conditions with visible blue light (440 nm or 456 nm) in an acetone solvent without recourse to transition-metal or organic dye based photoredox catalysts. The reaction proceeds via photoactivation of a transiently self-assembled chromophore from N-(acyloxy)phthalimide and NaI/PPh3. Solvation plays a crucial role in the reactivity.


Subject(s)
Amino Acids/chemistry , Hydroxy Acids/chemistry , Organophosphorus Compounds/chemistry , Sodium Iodide/chemistry , Alkylation , Catalysis , Decarboxylation , Molecular Structure , Oxidation-Reduction , Photochemical Processes
6.
J Phys Chem Lett ; 10(18): 5536-5541, 2019 Sep 19.
Article in English | MEDLINE | ID: mdl-31393133

ABSTRACT

The single-molecule Förster resonance energy transfer (smFRET) technique is widely used for studying conformational dynamics of biopolymers. However, smFRET requires double dye labeling and is usually utilized for detecting dynamics on slow time scales (≳ milliseconds). In this Letter, we report dynamic-quenching two-dimensional fluorescence lifetime correlation spectroscopy (DQ 2D FLCS) that can elucidate the microsecond conformational dynamics of biopolymers with only single dye labeling. In DQ 2D FLCS, the difference in solvent accessibility of the labeled dye makes the fluorescence lifetime different, which is used for distinguishing different conformers. By applying DQ 2D FLCS to a singly labeled DNA hairpin, we successfully detect microsecond interconversion dynamics between the open and closed forms and evaluate the state-specific solvent accessibility of each form with Stern-Volmer analysis. Because DQ 2D FLCS is sensitive to the local structural change, it is complementary to FRET-based 2D FLCS and thus is a new, powerful tool for studying structural dynamics of biopolymers.


Subject(s)
DNA/chemistry , Fluorescence Resonance Energy Transfer/methods , Single Molecule Imaging/methods , Fluorescent Dyes/chemistry , Kinetics , Molecular Conformation , Sodium Iodide/chemistry , Solvents/chemistry , Thermodynamics
7.
J Chromatogr A ; 1591: 131-137, 2019 Apr 26.
Article in English | MEDLINE | ID: mdl-30679046

ABSTRACT

The selective and sensitive determination of potential genotoxic methanesulfonate impurities in drug substances is highly challenging. A new method is reported for testing of methyl methanesulfonate (MMS), ethyl methanesulfonate (EMS) and isopropyl methanesulfonate (IPMS) in active pharmaceutical ingredients (APIs). Headspace single drop microextraction (HS-SDME) with room-temperature ionic liquid (RTIL) as extractant was employed to preconcentrate analytes and eliminate the drug matrix simultaneously. In order to increase volatilities for HS extraction and to improve their reactivity of the further derivatization at the same time, sodium iodide (NaI) was added to the sample to derivatize methanesulfonates to the corresponding iodoalkanes. The iodoalkanes in the extract were derivatized with N, N-diethyldithiocarbamate (DDTC) after HS-SDME, followed by separation and detection with high-performance liquid chromatography with ultraviolet detection (HPLC-UV). Several important parameters, including reaction temperature, reaction time and concentration of NaI, sample volume, microdrop volume, stirring rate, salt addition, extraction time, concentration, reaction time and reaction temperature of DDTC were investigated. Under the optimal conditions, LODs and LOQs of all methanesulfonates were 15 ng mL-1 and 40 ng mL-1, respectively. Linearity (correlation coefficient values r > 0.999) and precision (the relative standard deviations were 1.0-4.6%) of six repeated injections were obtained. The recoveries at three spiked concentration levels were all in the range of 86.2-107.5% with the relative standard deviations <3.5%. The method reported here avoids interference of drug substances efficiently and detects methanesulfonate impurities in high sensitivity by HPLC-UV in Imatinib Mesylate and Levofloxacin Mesylate.


Subject(s)
Chromatography, High Pressure Liquid/methods , Liquid Phase Microextraction/methods , Mesylates/analysis , Ditiocarb/chemistry , Limit of Detection , Reproducibility of Results , Sodium Iodide/chemistry , Temperature , Time Factors
8.
Nanoscale ; 11(4): 1531-1537, 2019 Jan 23.
Article in English | MEDLINE | ID: mdl-30623961

ABSTRACT

Extracellular vesicles (EVs) are considered sophisticated vehicles for cell-to-cell communication, thanks to the possibility of handling a variable cargo in a shell with multiple types of decoders. Surface glycosylation of EVs is a method that could be used to control their interaction with different cells and, consequently, the biodistribution of the vesicles in the body. Herein, we produced EVs derived from mouse liver proliferative cells, and we treated them with neuraminidase, an enzyme that digests the terminal sialic acid residues from glycoproteins. Afterwards, we labeled the EVs directly with [124I]Na and injected them in mice intravenously or into the hock. The amount of radioactivity in major organs was measured at different time points after administration both in vivo using positron emission tomography and ex vivo (after animal sacrifice) using dissection and gamma counting. The results showed that intravenous injection leads to the rapid accumulation of EVs in the liver. Moreover, after some hours the distribution led to the presence of EVs in different organs including the brain. Glycosidase treatment induced an accumulation in the lungs, compared with the intact EVs. Furthermore, when the EVs were injected through the hock, the neuraminidase-treated vesicles distributed better at the axillary lymph nodes than the untreated EVs. This result shows that modification of the glycosylated complexes on the EV surface can affect the distribution of these vesicles, and specifically removing the sialic acid residues allows more EVs to reach and accumulate at the lungs.


Subject(s)
Extracellular Vesicles/metabolism , Animals , Brain/diagnostic imaging , Brain/metabolism , Extracellular Vesicles/chemistry , Glycosylation , Liver/diagnostic imaging , Liver/metabolism , Lung/diagnostic imaging , Lung/metabolism , Lymph Nodes/metabolism , Mice , Neuraminidase/metabolism , Positron-Emission Tomography , Sodium Iodide/chemistry , Sodium Iodide/metabolism , Tissue Distribution
9.
ACS Comb Sci ; 20(11): 595-601, 2018 11 12.
Article in English | MEDLINE | ID: mdl-30277748

ABSTRACT

Understanding the behavior of combinatorially developed luminescent materials requires detailed characterization methods that have been lacking thus far. We developed a device for directly surveying the luminescent properties of thin-film libraries created through combinatorial gradient sputter deposition. Step-scan recorded excitation-, emission- and luminescence decay spectra of a thin-film library were resolved and combined with EDX measurements on the same film, relating composition to luminescent properties. This technique was applied to a single-substrate gradient thin-film library of NaBr0.73I0.27 to NaBr0.09I0.91, doped with 6.5% to 16.5% Eu2+. This gradient film closely followed Vegard's law, with emission fluently shifting from 428 to 439 nm. In comparison, pure NaBr:Eu2+ showed emission at 428 nm and NaI:Eu2+ at 441 nm. Luminescence decay measurements demonstrated a great degree of concentration quenching in the gradient film. From these measurements we could conclude that an optimized phosphor would most efficiently luminesce when close to NaI:Eu2+. This gradient film confirmed that the method presented in this work allows to both study and optimize luminescent behavior in a broad range of host- and dopant systems.


Subject(s)
Europium/chemistry , Luminescent Agents/chemistry , Small Molecule Libraries/chemistry , Bromides/chemistry , Combinatorial Chemistry Techniques , Luminescence , Luminescent Measurements , Sodium Compounds/chemistry , Sodium Iodide/chemistry
10.
J Phys Chem B ; 122(14): 3974-3987, 2018 04 12.
Article in English | MEDLINE | ID: mdl-29513995

ABSTRACT

Ibuprofen (IBF), 2-(4-isobutylphenyl) propionic acid, is a surface-active, common nonsteroidal anti-inflammatory drug (NSAID), and it possesses a high critical micelle concentration (cmc) compared to that of conventional surfactants. The interactions of this common NSAID with an anionic surfactant, sodium octyl sulfosuccinate, were studied by tensiometric, fluorimetric, and calorimetric measurements to investigate this system as a possible model drug-delivery system for an NSAID like IBF, particularly in a high-dose regime for IBF. The interactions between the drug and the surfactant were modeled using a regular solution theory approach in the presence and absence of a model electrolyte (sodium iodide) and a novel nonaromatic, gemini hydrotrope, tetramethylene-1,4-bis( N, N-dimethyl- N-butylammonium)bromide (4-4-4). Both the simple and the hydrotropic electrolyte were shown to have an effect on the solution properties (aggregation parameters, interfacial properties, and thermodynamics of aggregate formation) of the drug-surfactant mixtures and on the interaction between the drug and the surfactant. Surface charges of all self-assembled systems were estimated from ζ-potential measurements, whereas density functional theory calculations showed the interaction energy comparison among all of the binary and ternary combinations. All of these results were interpreted in terms of how altering the subtle balance of hydrophobic and electrostatic forces can significantly improve the ability of these self-assembled systems to transport drug molecules.


Subject(s)
Anti-Inflammatory Agents, Non-Steroidal/chemistry , Drug Delivery Systems , Ibuprofen/chemistry , Quaternary Ammonium Compounds/chemistry , Sodium Iodide/chemistry , Succinates/chemistry , Surface-Active Agents/chemistry , Anions/chemistry , Anti-Inflammatory Agents, Non-Steroidal/administration & dosage , Electrolytes/chemistry , Ibuprofen/administration & dosage , Thermodynamics
11.
Chemphyschem ; 19(1): 24-28, 2018 01 05.
Article in English | MEDLINE | ID: mdl-29068113

ABSTRACT

Low-frequency (<300 cm-1 ) vibrational interactions between gold surfaces and dissolved halides in water were investigated by surface-enhanced Raman spectroscopy (SERS). Experiments with NaF, NaCl, NaBr, and NaI salts indicate that the Raman shifts of the Au-X- SERS bands correlate with the bond strength of the corresponding covalent interaction. These low-frequency SERS bands open up new means to investigate the aggregation of nanoparticles in aqueous environments.


Subject(s)
Bromides/chemistry , Gold/chemistry , Metal Nanoparticles/chemistry , Sodium Chloride/chemistry , Sodium Compounds/chemistry , Sodium Fluoride/chemistry , Sodium Iodide/chemistry , Spectrum Analysis, Raman , Surface Properties
12.
J Environ Radioact ; 188: 87-94, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29021085

ABSTRACT

In this work a hand-held spectrometer InSpector 1000 with NaI (Tl) 2″ x 2″ detector has been adapted to fast in situ gamma-ray spectroscopy. Two specially designed mounting stands with shielding have been built, allowing conducting measurements in different geometries. Three particular geometries (NW, IS50, IS00) have been chosen for efficiency calibration and further study. The first one (NW) is intended for small environmental samples (volume ca 140 cm3) collected on site. IS50 geometry is a typical in situ geometry meant for radioactivity measurements in soil with detector pointed towards the ground. In this geometry the probe is shielded and mounted 50 cm above the soil surface. The new proposed geometry IS00 is designed in the way that the detector is inserted directly into the soil in order to increase the counting efficiency. The methods of efficiency calibration involved using calibration standards (in NW geometry) and the results obtained in previous in situ measurements with InSpector 2000 portable spectrometer with HPGe detector and ISOCS™ Shield Systems, which is routinely used in environmental measurements. NW geometry turned out to be useful for natural radioisotopes concentrations (K-40, U-238 and Th-232), which significantly exceed typical values of those concentrations observed in Poland. Both IS50 and IS00 geometries are applicative for quick (2 h long measurement) evaluation of typical concentrations of K, U and Th in soils. The newly proposed geometry IS00 is superior as it showed lower detection limits and uncertainties as well as its handling was far easier than of IS50. Authors have proven that hand-held spectrometer InSpector 1000, together with mounting stands and shielding, can be successfully used for fast in situ gamma-spectroscopy. Its relatively small weight and good mobility are additional assets. Moreover, detailed procedures for measurements in each geometry have been developed to conduct such analyses properly.


Subject(s)
Radiation Monitoring/instrumentation , Radioisotopes/analysis , Spectrometry, Gamma/methods , Calibration , Poland , Radioactive Pollutants/analysis , Sodium Iodide/chemistry
13.
Mar Pollut Bull ; 115(1-2): 120-129, 2017 Feb 15.
Article in English | MEDLINE | ID: mdl-28040250

ABSTRACT

Evaluating the microplastics pollution on the shores requires overcoming the technological and economical challenge of efficient plastic extraction from sand. The recovery of dense microplastics requires the use of NaI solutions, a costly process. The aim of this study is to decrease this cost by recycling the NaI solutions and to determine the impact of NaI storage. For studying the NaI recyclability, the solution density and the salt mass have been monitored during ten life cycles. Density, pH and salt mass have been measured for 40days to assess the storage effect. The results show that NaI solutions are recyclable without any density alterations with a total loss of 35.9% after the 10cycles of use. During storage, chemical reactions may appear but are reversible. Consequently, the use of recycling methods allows for a significant cost reduction. How far the plastic extraction by dense solutions is representative is discussed.


Subject(s)
Plastics/isolation & purification , Recycling , Sodium Iodide/chemistry , Water Pollutants, Chemical/isolation & purification , Silicon Dioxide
14.
Chem Commun (Camb) ; 52(45): 7221-4, 2016 Jun 07.
Article in English | MEDLINE | ID: mdl-27029282

ABSTRACT

We demonstrate the use of the miniaturised Medipix positron sensor for detection of the clinical PET radiotracer, [(68)Ga]gallium-citrate, on a silica-based monolith, towards microfluidic quality control. The system achieved a far superior signal-to-noise ratio compared to conventional sodium iodide-based radio-HPLC detection and allowed real-time visualisation of positrons in the monolith.


Subject(s)
Positron-Emission Tomography/standards , Radiopharmaceuticals/chemistry , Silicon Dioxide/chemistry , Chromatography, High Pressure Liquid , Citrates/chemistry , Gallium/chemistry , Gallium Radioisotopes/chemistry , Miniaturization , Quality Control , Signal-To-Noise Ratio , Sodium Iodide/chemistry
15.
Bioorg Med Chem Lett ; 25(19): 4239-44, 2015 Oct 01.
Article in English | MEDLINE | ID: mdl-26292628

ABSTRACT

A facile one-pot method for the synthesis of novel podophyllotoxin-thiourea congeners has been developed by using NH2SO3H/NaI system. Interestingly, 4ß-azido podophyllotoxin reduction with concomitant aryl isothiocyanates coupling under mild reaction conditions has been achieved. These compounds have been investigated for their in vitro cytotoxicity against A549, MDA MB-231, DU-145, LNCaP, and HGC-27 cancer cell lines. Some of the representative compounds have selectively exhibited cytotoxicity on DU-145 (human prostate cancer) cells and the most potent compound was 4a (IC50 of 0.50 ± 0.03 µM) with optimal safety therapeutic window (81.7 fold) on normal human prostate cell line (RWPE-1, IC50 of 40.85 ± 0.78). The flow-cytometric analysis of the compound 4a in prostate cancer cells indicated a strong G2/M-phase arrest and significant topoisomerase II inhibition activity. Furthermore, these compounds induce apoptosis as observed by Acridine Orange and Ethidium Bromide (AO/EB) staining and Annexin V binding assay. Molecular docking results of the title compounds with topoisomerase-IIα were presented as theoretical support for the experimental data.


Subject(s)
Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/pharmacology , Apoptosis/drug effects , DNA Topoisomerases, Type II/metabolism , Podophyllotoxin/pharmacology , Thiourea/pharmacology , Topoisomerase II Inhibitors/pharmacology , Amides/chemistry , Antineoplastic Agents/chemistry , Cell Line, Tumor , Cell Proliferation/drug effects , Dose-Response Relationship, Drug , Drug Screening Assays, Antitumor , Humans , Molecular Structure , Podophyllotoxin/chemistry , Sodium Iodide/chemistry , Structure-Activity Relationship , Sulfur Oxides/chemistry , Thiourea/chemistry , Topoisomerase II Inhibitors/chemical synthesis , Topoisomerase II Inhibitors/chemistry
16.
J Comput Chem ; 36(16): 1196-212, 2015 Jun 15.
Article in English | MEDLINE | ID: mdl-25868455

ABSTRACT

In this study, we examine the temperature dependence of free energetics of nanotube association using graphical processing unit-enabled all-atom molecular dynamics simulations (FEN ZI) with two (10,10) single-walled carbon nanotubes in 3 m NaI aqueous salt solution. Results suggest that the free energy, enthalpy and entropy changes for the association process are all reduced at the high temperature, in agreement with previous investigations using other hydrophobes. Via the decomposition of free energy into individual components, we found that solvent contribution (including water, anion, and cation contributions) is correlated with the spatial distribution of the corresponding species and is influenced distinctly by the temperature. We studied the spatial distribution and the structure of the solvent in different regions: intertube, intratube and the bulk solvent. By calculating the fluctuation of coarse-grained tube-solvent surfaces, we found that tube-water interfacial fluctuation exhibits the strongest temperature dependence. By taking ions to be a solvent-like medium in the absence of water, tube-anion interfacial fluctuation shows similar but weaker dependence on temperature, while tube-cation interfacial fluctuation shows no dependence in general. These characteristics are discussed via the malleability of their corresponding solvation shells relative to the nanotube surface. Hydrogen bonding profiles and tetrahedrality of water arrangement are also computed to compare the structure of solvent in the solvent bulk and intertube region. The hydrophobic confinement induces a relatively lower concentration environment in the intertube region, therefore causing different intertube solvent structures which depend on the tube separation. This study is relevant in the continuing discourse on hydrophobic interactions (as they impact generally a broad class of phenomena in biology, biochemistry, and materials science and soft condensed matter research), and interpretations of hydrophobicity in terms of alternative but parallel signatures such as interfacial fluctuations, dewetting transitions, and enhanced fluctuation probabilities at interfaces.


Subject(s)
Nanotubes, Carbon/chemistry , Sodium Iodide/chemistry , Thermodynamics , Hydrogen Bonding , Hydrophobic and Hydrophilic Interactions , Molecular Dynamics Simulation , Solutions/chemistry , Temperature , Water/chemistry
17.
Macromol Rapid Commun ; 36(5): 453-8, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25639700

ABSTRACT

Water-soluble polypeptides bearing 1-alkylimidazolium (methyl or n-butyl) and various counter-anions (i.e., Cl(-), I(-) or BF4 (-)) are prepared by ring-opening polymerization of γ-4-chloromethylbenzyl-l-glutamate-based N-carboxyanhydride (3), post-polymerization of poly(γ-4-chloromethylbenzyl-l-glutamate) (4), and ion-exchange reaction. Circular dichroism (CD) analysis reveals that the resulting polypeptides adopt an α-helical conformation in water with a fractional helicity in the range of 30%-56% at 20 °C and exhibit good conformational stability against temperature variations. The polypeptides exhibit lower critical solution temperature (LCST)-type or upper critical solution temperature (UCST)-type transitions in organic solvents or in water. The UCST-type transition temperature (Tpt ) in water is independent on the molecular weight, yet it decreases upon addition of NaCl and increases upon addition of NaI or NaBF4, suggesting a mainly electrostatic interaction mechanism.


Subject(s)
Peptides/chemistry , Phase Transition , Static Electricity , Temperature , Water/chemistry , Boric Acids/chemistry , Circular Dichroism , Molecular Conformation , Molecular Weight , Polymerization , Sodium Chloride/chemistry , Sodium Iodide/chemistry , Solutions , Transition Temperature
18.
Radiol Phys Technol ; 8(1): 125-34, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25404493

ABSTRACT

The applicability of the activation of an NaI scintillator for neutron monitoring at a clinical linac was investigated experimentally. Thermal neutron fluence rates are derived by measurement of the I-128 activity generated in an NaI scintillator irradiated by neutrons; ß-rays from I-128 are detected efficiently by the NaI scintillator. In order to verify the validity of this method for neutron measurement, we irradiated an NaI scintillator at a research reactor, and the neutron fluence rate was estimated. The method was then applied to neutron measurement at a 10-MV linac (Varian Clinac 21EX), and the neutron fluence rate was estimated at the isocenter and at 30 cm from the isocenter. When the scintillator was irradiated directly by high-energy X-rays, the production of I-126 was observed due to photo-nuclear reactions, in addition to the generation of I-128 and Na-24. From the results obtained by these measurements, it was found that the neutron measurement by activation of an NaI scintillator has a great advantage in estimates of a low neutron fluence rate by use of a quick measurement following a short-time irradiation. Also, the future application of this method to quasi real-time monitoring of neutrons during patient treatments at a radiotherapy facility is discussed, as well as the method of evaluation of the neutron dose.


Subject(s)
Neutrons , Photons , Radiotherapy, High-Energy/instrumentation , Scintillation Counting/instrumentation , Scintillation Counting/methods , Sodium Iodide/chemistry , Humans , Monte Carlo Method , Particle Accelerators , Radiation Dosage , Radiotherapy, High-Energy/methods , X-Rays
19.
Electromagn Biol Med ; 34(4): 361-9, 2015.
Article in English | MEDLINE | ID: mdl-25006865

ABSTRACT

The electric field effects on conformational properties of trialanine in different halide solutions were explored with long-scale molecular dynamics simulations. NaF, NaCl, NaBr and NaI solutions of low (0.2 M) and high (2 M) concentrations were exposed to a constant electric field of 1000 V/m. Generally, the electric field does not disturb trialanine's structure. Large structural changes appear only in the case of the supersaturated 2.0 M NaF solution containing NaF crystals. Although the electric field affects in a complex way, all the ions-water-peptide interactions, it predominantly affects the electroselectivity effect, which describes specific interactions such as the ion-pair formation.


Subject(s)
Bromides/chemistry , Electromagnetic Fields , Oligopeptides/chemistry , Sodium Chloride/chemistry , Sodium Compounds/chemistry , Sodium Fluoride/chemistry , Sodium Iodide/chemistry , Halogens/chemistry , Ions , Molecular Dynamics Simulation , Software , Solutions , Water/chemistry
20.
Acta Crystallogr F Struct Biol Commun ; 70(Pt 9): 1127-31, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25195879

ABSTRACT

Cisplatin and carboplatin are platinum anticancer agents that are used to treat a variety of cancers. Previous X-ray crystallographic studies of carboplatin binding to histidine in hen egg-white lysozyme (HEWL) showed a partial chemical conversion of carboplatin to cisplatin owing to the high sodium chloride concentration used in the crystallization conditions. Also, the co-crystallization of HEWL with carboplatin in sodium bromide conditions resulted in the partial conversion of carboplatin to the transbromoplatin form, with a portion of the cyclobutanedicarboxylate (CBDC) moiety still present. The results of the co-crystallization of HEWL with cisplatin or carboplatin in sodium iodide conditions are now reported in order to determine whether the cisplatin and carboplatin converted to the iodo form, and whether this took place in a similar way to the partial conversion of carboplatin to cisplatin in NaCl conditions or to transbromoplatin in NaBr conditions as seen previously. It is reported here that a partial chemical transformation has taken place to a transplatin form for both ligands. The NaI-grown crystals belonged to the monoclinic space group P21 with two molecules in the asymmetric unit. The chemically transformed cisplatin and carboplatin bind to both His15 residues, i.e. in each asymmetric unit. The binding is only at the N(δ) atom of His15. A third platinum species is also seen in both conditions bound in a crevice between symmetry-related molecules. Here, the platinum is bound to three I atoms identified based on their anomalous difference electron densities and their refined occupancies, with the fourth bound atom being a Cl atom (in the cisplatin case) or a portion of the CBDC moiety (in the carboplatin case).


Subject(s)
Antineoplastic Agents/chemistry , Carboplatin/chemistry , Cisplatin/chemistry , Histidine/chemistry , Proteins/chemistry , Sodium Iodide/chemistry , Crystallization , Crystallography, X-Ray , Models, Molecular
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