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1.
Commun Biol ; 7(1): 1161, 2024 Sep 17.
Article in English | MEDLINE | ID: mdl-39289481

ABSTRACT

Oxidative stress in combination with acid stress has been shown to inactivate a wide spectrum of microorganisms, including multi-resistant bacteria. This occurs e.g. in phagolysosomes or during treatment by cold atmospheric pressure plasmas (CAP) and possibly depends on the cell membrane. We therefore explored the effects of CAP-generated reactive oxygen and nitrogen species (RONS) on bacterial growth inhibition and membranes in neutral and acidic suspensions. We observed that growth inhibition was most efficient when bacteria were treated by a mix of short and long-lived RONS in an acidic environment. Membrane packing was affected mainly upon contact with short-lived RONS, while also acidity strongly modulated packing. Under these conditions, Gram-negative bacteria displayed large potassium release while SYTOX Green influx remained marginal. Growth inhibition of Gram-negative bacteria correlated well with outer membrane (OM) permeabilization that occurred upon contact with short and/or long-lived RONS in synergy with acidity. In Gram-positive bacteria, CAP impaired membrane potential possibly through pore formation upon contact with short-lived RONS while formation of membrane protein hydroperoxides was probably involved in these effects. In summary, our study provides a wide perspective on understanding inactivation mechanisms of bacteria by RONS in combination with acidity.


Subject(s)
Cell Membrane , Escherichia coli , Oxidative Stress , Oxidative Stress/drug effects , Escherichia coli/drug effects , Escherichia coli/physiology , Escherichia coli/metabolism , Escherichia coli/growth & development , Cell Membrane/metabolism , Cell Membrane/drug effects , Staphylococcus/drug effects , Staphylococcus/physiology , Staphylococcus/metabolism , Staphylococcus/growth & development , Reactive Oxygen Species/metabolism , Acids/pharmacology , Acids/metabolism , Reactive Nitrogen Species/metabolism , Hydrogen-Ion Concentration , Plasma Gases/pharmacology
2.
Microb Pathog ; 195: 106902, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39218374

ABSTRACT

Mastitis remains a paramount economic threat to dairy livestock, with antibiotic resistance severely compromising treatment efficacy. This study provides an in-depth investigation into the multidrug resistance (MDR) mechanisms in bacterial isolates from bovine mastitis, emphasizing the roles of antimicrobial resistance genes (ARGs), biofilm formation, and active efflux systems. A total of 162 Staphylococci, eight Escherichia coli, and seven Klebsiella spp. isolates were obtained from 215 milk samples of clinical and subclinical mastitis cases. Antibiotic susceptibility testing identified Twenty Staphylococci (12.35 %), six E. coli (75 %) and seven Klebsiella (100 %) identified as MDR displaying significant resistance to ß-lactams and tetracyclines The Multiple Antibiotic Resistance (MAR) index of these isolates ranged from 0.375 to 1.0, highlighting extensive resistance. Notably, 29 of the 33 MDR isolates produced biofilms on Congo red agar, while all exhibited biofilm formation in the Microtitre Plate assay. Critical ARGs (blaZ, blaTEM, blaCTX-M, tetM, tetA, tetB, tetC, strA/B, aadA) and efflux pump genes (acrB, acrE, acrF, emrB, norB) regulating active efflux were identified. This pioneering study elucidates the synergistic contribution of ARGs, biofilm production, and efflux pump activity to MDR in bovine mastitis pathogens. To our knowledge, this comprehensive study is the first of its kind, offering novel insights into the complex resistance mechanisms. The findings underscore the imperative need for advanced antibiotic stewardship and strategic interventions in dairy farming to curb the rise of antibiotic-resistant infections, thereby protecting both animal and public health.


Subject(s)
Anti-Bacterial Agents , Biofilms , Drug Resistance, Multiple, Bacterial , Klebsiella , Mastitis, Bovine , Microbial Sensitivity Tests , Milk , Staphylococcus , Biofilms/drug effects , Biofilms/growth & development , Cattle , Animals , Mastitis, Bovine/microbiology , Female , Drug Resistance, Multiple, Bacterial/genetics , Anti-Bacterial Agents/pharmacology , Klebsiella/genetics , Klebsiella/drug effects , Staphylococcus/drug effects , Staphylococcus/genetics , Milk/microbiology , Escherichia coli/genetics , Escherichia coli/drug effects , Genes, Bacterial/genetics , Bacterial Proteins/genetics , Bacterial Proteins/metabolism
3.
Arch Microbiol ; 206(10): 399, 2024 Sep 10.
Article in English | MEDLINE | ID: mdl-39254720

ABSTRACT

Antimicrobial resistance (AMR) is global health concern escalating rapidly in both clinical settings and environment. The effluent from pharmaceuticals and hospitals may contain diverse antibiotics, exerting selective pressure to develop AMR. To study the aquatic prevalence of drug-resistant staphylococci, sampling was done from river Yamuna (3 sites) and wastewater (7 sites) near pharmaceutical industries in Delhi-NCR, India. 59.25% (224/378) were considered presumptive staphylococci while, methicillin resistance was noted in 25% (56/224) isolates. Further, 23 methicillin-resistant coagulase negative staphylococci (MR-CoNS) of 8 different species were identified via 16S rRNA gene sequencing. Multidrug resistance (MDR) was noted in 60.87% (14/23) isolates. PCR based detection of antibiotic resistance genes revealed the number of isolates containing mecA (7/23), blaZ (6/23), msrA (10/23), aac(6')aph (2") (2/23), aph(3')-IIIa (2/23), ant(4')-Ia (1/23), dfrG (4/23), dfrA(drfS1) (3/23), tetK (1/23) and tetM (1/23). The current research highlights the concerning prevalence of MDR-CoNS in aquatic environment in Delhi.


Subject(s)
Anti-Bacterial Agents , Coagulase , Drug Resistance, Multiple, Bacterial , RNA, Ribosomal, 16S , Staphylococcus , Wastewater , India/epidemiology , Wastewater/microbiology , Staphylococcus/genetics , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Staphylococcus/classification , Drug Resistance, Multiple, Bacterial/genetics , Coagulase/metabolism , Coagulase/genetics , RNA, Ribosomal, 16S/genetics , Anti-Bacterial Agents/pharmacology , Prevalence , Microbial Sensitivity Tests
4.
Arch Microbiol ; 206(9): 370, 2024 Aug 08.
Article in English | MEDLINE | ID: mdl-39115561

ABSTRACT

Staphylococcus xylosus has emerged as a bovine mastitis pathogen with increasing drug resistance, resulting in substantial economic impacts. This study utilized iTRAQ analysis to investigate the mechanisms driving resistance evolution in S. xylosus under ceftiofur sodium stress. Findings revealed notable variations in the expression of 143 proteins, particularly glycolysis-related proteins (TpiA, Eno, GlpD, Ldh) and peptidoglycan (PG) hydrolase Atl. Following the induction of ceftiofur sodium resistance in S. xylosus, the emergence of resistant strains displaying characteristics of small colony variants (SCVs) was observed. The transcript levels of TpiA, Eno, GlpD and Ldh were up-regulated, TCA cycle proteins (ICDH, MDH) and Atl were down-regulated, lactate content was increased, and NADH concentration was decreased in SCV compared to the wild strain. That indicates a potential role of carbon metabolism, specifically PG hydrolysis, glycolysis, and the TCA cycle, in the development of resistance to ceftiofur sodium in S. xylosus.


Subject(s)
Anti-Bacterial Agents , Carbon , Cephalosporins , Drug Resistance, Bacterial , Staphylococcus , Cephalosporins/pharmacology , Cephalosporins/metabolism , Anti-Bacterial Agents/pharmacology , Staphylococcus/drug effects , Staphylococcus/genetics , Staphylococcus/metabolism , Carbon/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Animals , Cattle , Glycolysis/drug effects , Citric Acid Cycle , Mastitis, Bovine/microbiology , Staphylococcal Infections/microbiology , Microbial Sensitivity Tests , Female
5.
Microb Pathog ; 195: 106883, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39182856

ABSTRACT

Therapeutic management of mastitis faces significant challenges due to multidrug resistance. In the present study, multi-drug-resistant (MDR) Staphylococcus spp, Klebsiella pneumoniae, and Escherichia coli were isolated from bovine clinical mastitis cases and the phenotypic and genotypic multidrug resistance profiling was carried out. Silver nanoparticles (AgNPs) were biosynthesized using Ocimum sanctum leaf extracts and characterized via UV Vis absorption, Fourier Transform Infrared Spectroscopy, X-ray diffraction studies, Energy dispersive spectroscopy and Electron Microscopy. The determined minimum inhibitory concentration and minimum bactericidal concentration of the AgNPs against the recovered MDR isolates were 62.5 µg/ml and 125 µg/ml respectively. At a concentration of 50 µg/ml, the AgNPs demonstrated biofilm inhibitory activities of 80.35 % for MDR E. coli, 71.29 % for S. aureus and 60.18 % for MDR K. pneumoniae. Post-treatment observations revealed notable differences in biofilm formation across bacterial isolates. Furthermore, AgNP treatment led to significant downregulation of expression of the efflux pump genes acrB, acrE, acrF, and emrB in Gram-negative isolates and norB in Staphylococci isolates. This research underscores the potential for the development of an eco-friendly antimicrobial alternative in the form of green synthesized silver nanoparticles to combat drug resistance offering potential antibiofilm and efflux pump inhibitory activities.


Subject(s)
Anti-Bacterial Agents , Biofilms , Drug Resistance, Multiple, Bacterial , Klebsiella pneumoniae , Mastitis, Bovine , Metal Nanoparticles , Microbial Sensitivity Tests , Ocimum sanctum , Plant Extracts , Silver , Animals , Biofilms/drug effects , Cattle , Silver/pharmacology , Silver/chemistry , Silver/metabolism , Mastitis, Bovine/microbiology , Mastitis, Bovine/drug therapy , Metal Nanoparticles/chemistry , Anti-Bacterial Agents/pharmacology , Female , Plant Extracts/pharmacology , Plant Extracts/chemistry , Drug Resistance, Multiple, Bacterial/drug effects , Ocimum sanctum/chemistry , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/genetics , Plant Leaves/microbiology , Escherichia coli/drug effects , Escherichia coli/genetics , Green Chemistry Technology , Staphylococcus/drug effects
6.
Open Vet J ; 14(7): 1689-1700, 2024 Jul.
Article in English | MEDLINE | ID: mdl-39175981

ABSTRACT

Background: Food safety and food-borne infections are major subjects of global interest. Dairy products are considered as important source for these infections. Aim: The present study was conducted to identify the occurrence and to genotype isolates of Staphylococcus spp. recovered from milk samples in Al-Diwaniyah City, Iraq. Methods: The current study included the collection of 50 milk samples purchased from local stores in the current city. These samples were subjected to bacterial cultivation and biochemical tests. Later, the growth was used to extract the genomic DNA that was exposed to PCR and partial gene sequencing both targeted the 16S rRNA gene at a specific genetic piece. Results: The PCR results demonstrated the amplification of the genetic fragment of five genetic clusters for each of Staphylococcus aureus (SAD11, SAD12, SAD13, SAD14, and SAD15), Staphylococcus epidermidis (SED1, SED2, SED3, SED4, and SED5), and Staphylococcus intermedius (SID1, SID2, SID3, SID4, and SID5). The PCR products were sent out to sequencing and reported that the current isolates were similar in their genetic content with global isolates at 95.34% to 97.59%, 96.21% to 97.57%, and 96.09% to 97.88%, respectively, of identity. Conclusion: The present findings show high genetic variations among isolates of S. aureus, S. epidermidis, and S. intermedius recovered from milk samples, and these genotypes are found in different infection settings related to humans and animals, which may pose high risks to humans and animals.


Subject(s)
Milk , Staphylococcus , Milk/microbiology , Staphylococcus/genetics , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Animals , Virulence/genetics , Drug Resistance, Bacterial/genetics , Iraq , Anti-Bacterial Agents/pharmacology , Cattle , RNA, Ribosomal, 16S/analysis , RNA, Ribosomal, 16S/genetics , Genotype , Staphylococcal Infections/veterinary , Staphylococcal Infections/microbiology , Staphylococcal Infections/epidemiology , Polymerase Chain Reaction/veterinary
7.
Sci Rep ; 14(1): 19747, 2024 08 26.
Article in English | MEDLINE | ID: mdl-39187540

ABSTRACT

Staphylococci are responsible for a wide range of infections in animals. The most common species infecting animals include Staphylococcus aureus, Staphylococcus epidermidis and Staphylococcus intermedius. Recent increases in antibiotic use and antibiotic resistance in animals highlight the need to understand the potential role of commercial livestock as a reservoir of staphylococci and antibiotic resistance genes. Nasal swabs were collected from 143 apparently healthy pigs and 21 pig farm workers, and 45 environmental swabs of feed and water troughs, from two commercial pig farms in the Western Cape, South Africa. Staphylococci were isolated, identified using mass-spectrometry, and antimicrobial susceptibility testing and Illumina whole genome sequencing were performed. One hundred and eighty-five (185) Staphylococcus spp. isolates were obtained, with Mammalicoccus sciuri (n = 57; 31%) being the most common, followed by S. hyicus (n = 40; 22%) and S. aureus (n = 29; 16%). S. epidermidis was predominantly identified in the farm workers (n = 18; 86%). Tetracycline resistance was observed across all species, with rates ranging from 67 to 100%. Majority of M. sciuri isolates (n = 40; 70%) were methicillin resistant, with 78% (n = 31) harbouring mecA. M. sciuri isolates had genes/elements which were associated with SCCmec_type_III (3A) and SCCmec_type_VIII(4A) and were mostly observed in ST61 strains. ST239 strains were associated with SCCmec_type_III(3A). High rates of tetracycline resistance were identified among staphylococci in the pig farms in Western Cape, South Africa. This highlights the need for policy makers to regulate the use of this antibiotic in pig farming.


Subject(s)
Anti-Bacterial Agents , Farms , Staphylococcal Infections , Staphylococcus , Animals , South Africa/epidemiology , Swine/microbiology , Staphylococcal Infections/microbiology , Staphylococcal Infections/epidemiology , Staphylococcal Infections/veterinary , Staphylococcal Infections/drug therapy , Staphylococcus/drug effects , Staphylococcus/genetics , Staphylococcus/isolation & purification , Anti-Bacterial Agents/pharmacology , Humans , Microbial Sensitivity Tests , Drug Resistance, Bacterial/genetics , Swine Diseases/microbiology , Swine Diseases/epidemiology
8.
Int J Food Microbiol ; 425: 110873, 2024 Dec 02.
Article in English | MEDLINE | ID: mdl-39182346

ABSTRACT

The aim of the research was to examine the antimicrobial and antibiofilm effects of angelica, immortelle, laurel, hyssop, and sage plant dust essential oils (EOs) against isolated strains of Staphylococcus spp. from cheeses, in vitro and in the model of white cheese. MALDI-TOF MS analysis confirmed two Staphylococcus aureus strains and two coagulase-negative, identified as S. saprophyticus and S. warneri. All isolates produce biofilm, where the strains of S. aureus showed slightly better adherence. The main component of angelica EO was ß-phellandrene (48.19 %), while α-pinene (20.33 %) were dominant in immortelle EO, in hyssop EO cis-pinocamphone (37.25 %), in laurel EO 1,8-cineole (43.15 %) and in sage EO epirosmanol (26.25 %). The sage EO exhibited the strongest antistaphylococcal activity against all isolates. Synergism was also detected in combination of sage with hyssop or laurel EO. Better antibiofilm activity was confirmed for sage EO compared to hyssop EO. The mixture of sage/laurel EOs reduced the total number of staphylococci in the cheese after 4 days. Results indicate that in vitro applied EOs showed significant antistaphylococcal and antibiofilm activity, while the oil mixture reduced the initial total number of staphylococci.


Subject(s)
Anti-Bacterial Agents , Biofilms , Cheese , Oils, Volatile , Staphylococcus , Cheese/microbiology , Biofilms/drug effects , Oils, Volatile/pharmacology , Anti-Bacterial Agents/pharmacology , Staphylococcus/drug effects , Microbial Sensitivity Tests , Plant Oils/pharmacology
9.
BMC Microbiol ; 24(1): 298, 2024 Aug 10.
Article in English | MEDLINE | ID: mdl-39127665

ABSTRACT

BACKGROUND: Several diagnostic environments in Uganda lack real-time, robust and high-throughput technologies for comprehensive typing of microbes, which is a setback to infectious disease surveillance. This study combined various wet laboratory diagnostics to understand the epidemiology of pathogenic staphylococci isolated from animals in Uganda and the implications for global health security priorities. METHODS: A retrospective study was conducted employing records and pathogenic staphylococci (from animals) archived at the Central Diagnostic Laboratory (CDL), Makerere University, Uganda, between January 2012 and December 2019. The bacteria were speciated by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) and tested for virulence factors [beta lactamases, lecithinase, deoxyribonuclease (DNase), haemolysins] and resistance to ten antimicrobials of clinical and veterinary relevance. Tetracycline and methicillin resistance genes were also tested. RESULTS: The prevalent diseases were mastitis in cattle and skin infections in dogs. Of the 111 staphylococci tested by MALDI-TOF MS, 79 (71.2%) were Staphylococcus aureus, 27 (24.3%) were Staphylococcus pseudintermedius and 5 (4.5%) were Staphylococcus schleiferi. All these strains expressed haemolysins. The prevalence of strains with lecithinase, penicillinase, cephalosporinase and DNase was 35.9% (14/39), 89.7% (35/39), 0.0% (0/39) and 87.2% (34/39), respectively. Staphylococci were primarily resistant to early penicillins (over 80%), tetracycline (57.7%), and chloramphenicol (46.2%). Minimal resistance was noted with cloxacillin (0.0%), ciprofloxacin (9.6%), and cefoxitin (3.8%). The prevalence of multidrug resistance (MDR) was 78.8% for general staphylococci, 82.2% for S. aureus, 73.1% for S. pseudintermedius, and 60.0% for S. schleiferi. Multidrug resistant staphylococci were significantly more prevalent in the cattle isolates than in the dog isolates (P < 0.05). The prevalence of methicillin-resistant staphylococci (MRS) tested by resistance to cefoxitin and mecA carriage was 3.8%. These four strains were all isolated from dog skin infections. The tetK gene was the most predominant (35.4%), followed by tetM (25.0%). CONCLUSION: In resource-constrained settings, the approach of integrated diagnostics promises sustainable disease surveillance and the addressing of current capacity gaps. The emergence of MRS (zoonotic bacteria) in companion animals creates a likelihood of reduced treatment options for related human infections, a threat to global health.


Subject(s)
Staphylococcal Infections , Staphylococcus , Animals , Uganda/epidemiology , Staphylococcal Infections/microbiology , Staphylococcal Infections/veterinary , Staphylococcal Infections/epidemiology , Cattle , Retrospective Studies , Staphylococcus/genetics , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Staphylococcus/classification , Dogs , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Anti-Bacterial Agents/pharmacology , Virulence Factors/genetics , Female , Dog Diseases/microbiology , Dog Diseases/epidemiology , Dog Diseases/diagnosis , Cattle Diseases/microbiology , Cattle Diseases/epidemiology , Cattle Diseases/diagnosis , Microbial Sensitivity Tests
10.
Reprod Domest Anim ; 59(8): e14699, 2024 Aug.
Article in English | MEDLINE | ID: mdl-39104057

ABSTRACT

Many of the reproductive tract infections in the bitches are caused by bacteria that can normally be present on the vaginal mucosa. These bacteria also might have an important role as the cause responsible for pregnancy loss and fetal deaths. The choice of antibiotic therapy for the pregnant animal is narrow and represents a severe problem in veterinary practice, especially due to increased antimicrobial resistance. Due to incorrect antimicrobials use in breeding kennels, the aim of the present study was to assess the occurrence of the bacterial flora isolated from the pregnant bitches and their antibiotic sensitivity. The study was carried out at the private Veterinary clinic in Novi Sad, Serbia. The vaginal swabs were taken from 60 bitches diagnosed with pregnancy and were sent to be laboratory tested. Based on the results, the most common isolated pathogens were Staphylococcus pseudintermedius (20%) and beta-hemolytic streptococci (18.33%). Furthermore, significant resistance to antibiotics from beta-lactams group was detected. It is of particular importance that antimicrobial treatment be evidence based in order to reduce the overuse of antimicrobials due to increased concern regarding antimicrobial resistance.


Subject(s)
Anti-Bacterial Agents , Dog Diseases , Drug Resistance, Bacterial , Staphylococcus , Vagina , Animals , Female , Dogs , Pregnancy , Vagina/microbiology , Dog Diseases/microbiology , Dog Diseases/epidemiology , Dog Diseases/drug therapy , Anti-Bacterial Agents/pharmacology , Staphylococcus/drug effects , Pregnancy Complications, Infectious/veterinary , Pregnancy Complications, Infectious/microbiology , Pregnancy Complications, Infectious/epidemiology , Prevalence , Streptococcus/drug effects , Streptococcus/isolation & purification , Serbia/epidemiology , Microbial Sensitivity Tests
11.
J Med Primatol ; 53(5): e12732, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39160696

ABSTRACT

BACKGROUND: Marmosets (Callithrix sp.), including black-tuffed marmosets (C. penicillata), are neotropical primates that can be highly adapted to urban environments, especially parks and forested areas near cities. Staphylococcus spp. are part of the microbiota of many different hosts and lead to opportunistic severe infection. Isolates from wild animals can be resistant to antimicrobial drugs. However, there are a few studies that evaluated Staphylococcus spp. in neotropical primates. The goal of this study was to evaluate Staphylococcus spp. isolated from free-ranging black-tuffed marmosets. METHODS: Marmosets were captured in six urban parks. After sedation, skin and rectal swabs and feces were sampled. Staphylococcus spp. isolates were identified by MALDI-ToF and their antimicrobial susceptibility was determined. RESULTS: Over 30% of captured individuals were positive for Staphylococcus spp., and S. aureus was the most isolated species followed by Mammaliicoccus (Staphylococcus) sciuri. With the exception of the marmoset subjected to necropsy, none of the other had lesions, which supports that notion that Staphylococcus spp. are members of the microbiota, but also opportunistic pathogens. Most isolates were susceptible to all antimicrobials tested; however, one isolate of S. epidermidis was resistant to multiple antimicrobials (penicillin, cefoxitin, ciprofloxacin, clindamycin, and erythromycin). We considered S. aureus as the main staphylococci to colonize black-tuffed marmosets. CONCLUSIONS: Black-tuffed marmosets can be colonized by several Staphylococcus species, most frequently by S. aureus, and the majority of isolates were sensible to the antimicrobials tested. One S. epidermidis isolate was considered multidrug resistant.


Subject(s)
Anti-Bacterial Agents , Callithrix , Monkey Diseases , Staphylococcal Infections , Staphylococcus , Animals , Callithrix/microbiology , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Monkey Diseases/microbiology , Monkey Diseases/epidemiology , Staphylococcal Infections/veterinary , Staphylococcal Infections/microbiology , Staphylococcal Infections/epidemiology , Anti-Bacterial Agents/pharmacology , Female , Drug Resistance, Bacterial , Male , Microbiota/drug effects , Cities , Brazil/epidemiology , Feces/microbiology
12.
Virulence ; 15(1): 2396477, 2024 Dec.
Article in English | MEDLINE | ID: mdl-39185671

ABSTRACT

Staphylococcus argenteus is a novel species within the Staphylococcus aureus complex and can cause serious bloodstream infections (BSIs) in humans, which have been mainly reported in adults, especially the elderly. In this study, we analyzed the molecular characterization of a strain of S. argenteus (22WJ8192) isolated from the peripheral vein blood sample of a seven-month-old female infant in Eastern China. The 22WJ8192 belonged to sequence type (ST)2250 and harbored six antibiotic-resistance genes and 53 virulence genes and was resistant to penicillin. Additionally, we conducted a comparative analysis of the molecular characteristics of S. argenteus sourced from various origins within the dataset, predominantly from the National Center for Biotechnology Information Collection (NCBI) genome database. Antibiotic-resistance genes blaR1, blaI_of_Z, blaZ, fosB-Saur, tet(L), aph(3")-IIIa, mecA, and dfrG were more prevalent among the strains of human origin. Virulence genes lukF-PV, sak, sdrE, scn, sdrC, and sdrD were more prevalent among strains of human origin. The presence of antibiotic-resistance genes blaR1, blaI_of_Z, blaZ, fosB-Saur, and aph(3")-IIIa in strain 22WJ8192 was also more common among strains of human origin in the dataset. Conversely, the antibiotic-resistance genes tet(L), mecA, and dfrG, typically found in strains of human origin, were not detected in 22WJ8192. Additionally, virulence genes lukF-PV, sak, sdrE, scn, sdrC, and sdrD present in 22WJ8192 exhibited a higher prevalence among strains of human origin in the dataset. In conclusion, this study emphasizes the potential of S. argenteus ST2250 to induce severe bloodstream infections in infants, shedding light on the molecular characteristics of this strain.


Subject(s)
Anti-Bacterial Agents , Staphylococcal Infections , Staphylococcus , Virulence Factors , Humans , China/epidemiology , Staphylococcal Infections/microbiology , Staphylococcal Infections/epidemiology , Female , Staphylococcus/genetics , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Staphylococcus/classification , Staphylococcus/pathogenicity , Infant , Virulence Factors/genetics , Virulence/genetics , Anti-Bacterial Agents/pharmacology , Microbial Sensitivity Tests , Drug Resistance, Bacterial/genetics , Hospitals , Bacteremia/microbiology , Bacteremia/epidemiology
13.
Int J Med Microbiol ; 316: 151629, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39053073

ABSTRACT

BACKGROUND: In 2015, Staphylococcus argenteus was reported for the first time as a novel species of the Staphylococcus aureus complex. While S. argenteus has been found in many countries, its presence in Indonesia has not been reported yet. Our aim is to confirm S. argenteus presence in Indonesia, describe its characteristics and analyze its genomic diversity. METHODS: The S. aureus isolates used in this study were collected from patients with skin and soft tissue infections in Indonesia, between July 2009 to February 2010. Randomly selected isolates were recultured from -80 C° stocks and analyzed using matrix-assisted laser desorption/ionization - time of flight (MALDI-TOF). Isolates identified as S. argenteus, S. roterodami, or S. schweitzeri and S. aureus with a low score in the MALDI-TOF analysis were analyzed by a real-time PCR targeting the nucA gene able to identify true S. argenteus. Isolates identified as S. argenteus were further characterized by whole genome sequencing. Vitek®2 (bioMérieux) was used for antimicrobial susceptibility testing. RESULTS: Fifteen isolates were identified as S. argenteus, with the majority belonging to ST2250. Two pairs of isolates proved to be identical by core genome multilocus sequence typing analysis. Most isolates were susceptible to all antibiotics tested, except for seven isolates (46.7 %) that were resistant to benzylpenicillin, and one isolate was resistant to tetracycline (6.7 %). The presence of resistance genes blaZ and tet(45) correlated with these findings. Notably, the sey enterotoxin gene was prevalent in 80 % of the isolates. Other virulence factor genes were less prevalent. Plasmid replicon types in S. argenteus were also known to S. aureus. CONCLUSION: Our study reveals the occurrence of S. argenteus in Indonesia. The diversity within Indonesian S. argenteus matches the global diversity of S. argenteus. Identical isolates between patients indicate potential transmission events. A lower prevalence of a broad panel of virulence factors suggests that S. argenteus is less virulent than S. aureus.


Subject(s)
Anti-Bacterial Agents , Microbial Sensitivity Tests , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Staphylococcal Infections , Staphylococcus , Whole Genome Sequencing , Indonesia/epidemiology , Humans , Staphylococcus/genetics , Staphylococcus/isolation & purification , Staphylococcus/classification , Staphylococcus/drug effects , Staphylococcal Infections/microbiology , Staphylococcal Infections/epidemiology , Anti-Bacterial Agents/pharmacology , Male , Female , Adult , Multilocus Sequence Typing , Middle Aged , Young Adult , Soft Tissue Infections/microbiology , Soft Tissue Infections/epidemiology , Genome, Bacterial/genetics , Aged , Genetic Variation , Adolescent , Real-Time Polymerase Chain Reaction
14.
Comp Immunol Microbiol Infect Dis ; 112: 102216, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39033672

ABSTRACT

There is a significant issue concerning the dissemination of antimicrobial-resistant bacteria within companion animals. Urinary tract infections (UTIs) are a common problem in veterinary medicine for which empirical antibiotics are utilized. This study aimed to investigate the antimicrobial resistance of different uropathogens associated with UTIs in canine and feline cases. A total of 146 dogs and 162 cats suffered from lower urinary tract disorders were subjected to ultrasonographic and microbiological examination. Cystitis, urinary sediment, and cystic calculi are the most common ultrasonographic abnormalities associated with bacterial UTIs. Bacterial UTIs were obtained in 36.98 % and 25.92 % of cases in dogs and cats, respectively. A low rate of mixed infection was detected in canine cases (3.7 %). E. coli was the most prevalent pathogen isolated from 46.4 % and 66.7 % of canine and feline isolates, respectively followed by Proteus spp. in canine isolates (16.1 %) and Klebsiella spp. in feline isolates (14.3 %). Staphylococcus spp. was isolated from canine cases only with the detection of methicillin-resistant Staphylococcus pseudintermedius (MRSP) strains at 3.6 %. The majority of the isolated strains were resistant to various antibiotic classes, particularly ß-lactams. All gram-negative bacteria were susceptible to amikacin, whereas gram-positive strains exhibited 100 % sensitivity to nitrofurantoin and linezolid. Different bacterial species displayed low resistance to carbapenems and fluoroquinolones. Multi-drug resistance was reported in canine and feline strains at 64.3 % and 54.8 %, respectively. These findings prove the crucial necessity to restrict antibiotic consumption depending on urine culture and antibiotic sensitivity tests.


Subject(s)
Anti-Bacterial Agents , Cat Diseases , Dog Diseases , Escherichia coli , Microbial Sensitivity Tests , Ultrasonography , Urinary Tract Infections , Animals , Dogs , Cats , Cat Diseases/microbiology , Cat Diseases/drug therapy , Dog Diseases/microbiology , Dog Diseases/drug therapy , Urinary Tract Infections/microbiology , Urinary Tract Infections/veterinary , Anti-Bacterial Agents/pharmacology , Escherichia coli/drug effects , Escherichia coli/isolation & purification , Female , Drug Resistance, Bacterial , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Male , Proteus/drug effects , Proteus/isolation & purification , Klebsiella/drug effects , Klebsiella/isolation & purification , Cystitis/microbiology , Cystitis/veterinary
15.
Microbiol Spectr ; 12(9): e0381523, 2024 Sep 03.
Article in English | MEDLINE | ID: mdl-39041813

ABSTRACT

Reliable detection of mecA and mecC-mediated beta-lactam resistance using automated antimicrobial susceptibility test systems is critical for patient care. The aim of this study was to compare the performance of the new cefoxitin screen test (oxsf02n) on the Vitek 2 card (Vitek 2) and BD Phoenix PMC-100 Gram-Positive AST Panel (Phoenix) against the reference method for the detection of mecA (and mecC)-mediated beta-lactam resistance. Two hundred fifty clinical fresh and stock Staphylococcus spp. isolates were included. There were 120 mecA-positive, 10 mecC-positive, and 120 mecA and mecC-negative isolates. Cefoxitin screen and oxacillin tests were performed on Vitek 2 and Phoenix and by their respective reference methods (disk diffusion for the cefoxitin screen test and broth microdilution for oxacillin) for all isolates. PCR testing was also performed to confirm the presence of mecA and/or mecC genes. Results from each system were compared to the reference methods. Statistical hypotheses were evaluated both for Vitek 2 compared to the reference methods and Vitek 2 compared to the Phoenix. Compared to the reference method, the Vitek 2 cefoxitin screen test had 100% sensitivity/98% specificity and the Phoenix cefoxitin screen test had 84% sensitivity/100% specificity for the detection of mecA (and mecC)-mediated beta-lactam resistance. When the oxacillin test was combined with the cefoxitin screen for Vitek 2, the sensitivity and specificity were unchanged. However, when the oxacillin and cefoxitin screen tests were combined for the Phoenix, the sensitivity increased to 100% and the specificity remained unchanged (100%). When considering cefoxitin alone, the Vitek 2 screen test showed a higher sensitivity than the Phoenix for the detection of mecA and mecC-mediated beta-lactam resistance. However, currently, both systems use a combination of the cefoxitin and oxacillin tests to interpret the final result, and both reached a high level of performance when cefoxitin and oxacillin results were combined.IMPORTANCEThis research marks the inaugural evaluation of the revamped cefoxitin screen test version in Vitek 2, juxtaposing it against reference methods and a primary competitor BD Phoenix.


Subject(s)
Anti-Bacterial Agents , Cefoxitin , Microbial Sensitivity Tests , Cefoxitin/pharmacology , Microbial Sensitivity Tests/methods , Anti-Bacterial Agents/pharmacology , Humans , Bacterial Proteins/genetics , Oxacillin/pharmacology , Staphylococcus/drug effects , Staphylococcus/genetics , beta-Lactam Resistance , Staphylococcal Infections/microbiology , Penicillin-Binding Proteins/genetics
16.
J Photochem Photobiol B ; 257: 112971, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38955081

ABSTRACT

Bovine mastitis (BM) represents a significant challenge in the dairy industry. Limitations of conventional treatments have prompted the exploration of alternative approaches, such as photodynamic inactivation (PDI). In this study, we developed a PDI protocol to eliminate BM-associated pathogens using porphyrin-doped conjugated polymer nanoparticles (CPN). The PDI-CPN protocol was evaluated in four mastitis isolates of Staphylococcus and in a hyper-biofilm-forming reference strain. The results in planktonic cultures demonstrated that PDI-CPN exhibited a bactericidal profile upon relatively low light doses (∼9.6 J/cm2). Furthermore, following a seven-hour incubation period, no evidence of cellular reactivation was observed, indicating a highly efficient post-photodynamic inactivation effect. The successful elimination of bacterial suspensions encouraged us to test the PDI-CPN protocol on mature biofilms. Treatment using moderate light dose (∼64.8 J/cm2) reduced biofilm biomass and metabolic activity by up to 74% and 88%, respectively. The impact of PDI-CPN therapy on biofilms was investigated using scanning electron microscopy (SEM), which revealed nearly complete removal of the extracellular matrix and cocci. Moreover, ex vivo studies conducted on bovine udder skin demonstrated the efficacy of the therapy in eliminating bacteria from these scaffolds and its potential as a prophylactic method. Notably, the histological analysis of skin revealed no signs of cellular degeneration, suggesting that the protocol is safe and effective for BM treatment. Overall, this study demonstrates the potential of PDI-CPN in treating and preventing BM pathogens. It also provides insights into the effects of PDI-CPN on bacterial growth, metabolism, and survival over extended periods, aiding the development of effective control strategies and the optimization of future treatments.


Subject(s)
Biofilms , Light , Mastitis, Bovine , Nanoparticles , Polymers , Animals , Cattle , Nanoparticles/chemistry , Mastitis, Bovine/microbiology , Mastitis, Bovine/drug therapy , Biofilms/drug effects , Biofilms/radiation effects , Female , Polymers/chemistry , Polymers/pharmacology , Photosensitizing Agents/pharmacology , Photosensitizing Agents/chemistry , Porphyrins/chemistry , Porphyrins/pharmacology , Staphylococcus/drug effects , Staphylococcus/radiation effects , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/chemistry , Microscopy, Electron, Scanning , Photochemotherapy
17.
J Nat Prod ; 87(7): 1881-1887, 2024 Jul 26.
Article in English | MEDLINE | ID: mdl-38950087

ABSTRACT

A family of pyrazinone metabolites (1-11) were characterized from Staphylococcus xylosus ATCC 29971. Six of them were hydroxylated or methoxylated, which were proposed to be produced by the rare noncatalytic oxa-Michael addition reaction with a water or methanol molecule. It was confirmed that isopropyl alcohol can also be the Michael donor of the reaction. 1-7 and the synthetic precursor 2a showed significant inhibition of breast cancer cell migration.


Subject(s)
Pyrazines , Staphylococcus , Humans , Cell Movement/drug effects , Molecular Structure , Pyrazines/chemistry , Pyrazines/pharmacology , Staphylococcus/drug effects
18.
PLoS One ; 19(7): e0305211, 2024.
Article in English | MEDLINE | ID: mdl-38968222

ABSTRACT

Staphylococcus pseudintermedius is an opportunistic pathogen in dogs, and infection in humans is increasingly found, often linked to contact with dogs. We conducted a retrospective genotyping and antimicrobial susceptibility testing study of 406 S. pseudintermedius isolates cultured from animals (dogs, cats and an otter) and humans across Scotland, from 2007 to 2020. Seventy-five sequence types (STs) were identified, among the 130 isolates genotyped, with 59 seen only once. We observed the emergence of two methicillin resistant Staphylococcus pseudintermedius (MRSP) clones in Scotland: ST726, a novel locally-evolving clone, and ST551, first reported in 2015 in Poland, possibly linked to animal importation to Scotland from Central Europe. While ST71 was the most frequent S. pseudintermedius strain detected, other lineages that have been replacing ST71 in other countries, in addition to ST551, were detected. Multidrug resistance (MDR) was detected in 96.4% of MRSP and 8.4% of MSSP. A single MRSP isolate was resistant to mupirocin. Continuous surveillance for the emergence and dissemination of novel MDR MRSP in animals and humans and changes in antimicrobial susceptibility in S. pseudintermedius is warranted to minimise the threat to animal and human health.


Subject(s)
Methicillin Resistance , Pets , Staphylococcal Infections , Staphylococcus , Whole Genome Sequencing , Animals , Scotland , Staphylococcus/genetics , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Dogs/microbiology , Cats/microbiology , Staphylococcal Infections/microbiology , Staphylococcal Infections/veterinary , Staphylococcal Infections/epidemiology , Humans , Methicillin Resistance/genetics , Pets/microbiology , Anti-Bacterial Agents/pharmacology , Microbial Sensitivity Tests , Retrospective Studies , Dog Diseases/microbiology , Drug Resistance, Multiple, Bacterial/genetics , Cat Diseases/microbiology
19.
BMC Microbiol ; 24(1): 284, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-39085760

ABSTRACT

BACKGROUND: The safety of milk production in terms of foodborne infections is a worldwide issue, particularly in developing countries where production is often unhygienic. A cross-sectional study was conducted from December 2018 to August 2019 in the Meta District of Eastern Hararghe Zone, Oromia Regional State, Ethiopia. We aim to assess milk hygiene practices among smallholder dairy farmers, estimate the prevalence of Staphylococcus aureus in raw cow milk and swabs, assess associated risk factors, and the antimicrobial susceptibility test of S. aureus isolates. Face-to-face interviews with 30 respondents randomly selected from smallholder dairy farmers were used to assess the potential risk factors for S. aureus contaminations in milk. A total of 177 samples were examined using standard microbiological testing. The disc diffusion technique was also employed to assess the antibiotic susceptibility of the isolates. The data was analyzed using STATA® version 14.0 statistical software. RESULTS: According to the milk hygiene assessment, 80% of respondents did not wash cow udder before milking, did not use detergent to clean milk containers, and did not keep milk refrigerated before consumption or sale, while 63.3% of milk consumers ingested raw milk. They had never heard of staphylococci foodborne disease. Likewise, the overall prevalence of S. aureus was 12.42% (95%CI: 8.32-18.98). The prevalence of S. aureus in udder milk, equipment swabs, and milkers' hands was 18.8%, 26.7%, and 30%, respectively. The prevalence of S. aureus in milk is significantly associated with age, and mastitis history (p < 0.05). Moreover, old and mastitis positive animals were eight (OR: 8.40; 95%CI: 1.68-41.89) and four (OR: 4.33; 95%CI: 1.37-13.66) times more likely to be infected by S. aureus than adult, and mastitis negative animal. The isolates were resistant to penicillin G (97.4%) and tetracycline (69.2%) whereas susceptible to kanamycin, streptomycin, vancomycin, and cefotaxime, at 84.6%, 71.8%, 64%, and 58.8%, respectively. CONCLUSION: This study revealed the presence of antimicrobial-resistant patterns of S. aureus on commonly used antibiotics, as well as inadequate milk handling practices in the study area. Thus, awareness should be created on proper milk handling and hygiene as well as appropriate uses of antibiotics should be encouraged.


Subject(s)
Anti-Bacterial Agents , Microbial Sensitivity Tests , Milk , Animals , Milk/microbiology , Ethiopia/epidemiology , Cattle , Cross-Sectional Studies , Female , Anti-Bacterial Agents/pharmacology , Humans , Adult , Staphylococcal Infections/microbiology , Staphylococcal Infections/epidemiology , Staphylococcus aureus/drug effects , Staphylococcus aureus/isolation & purification , Dairying , Farms , Staphylococcus/drug effects , Staphylococcus/isolation & purification , Prevalence , Hygiene , Risk Factors , Male , Young Adult , Middle Aged
20.
J Infect Public Health ; 17(8): 102488, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38970926

ABSTRACT

BACKGROUND: Oral cavity is an ecological niche for colonization of staphylococci, which are a major bacterial species causing community-acquired infections in humans. In this study, prevalence, and characteristics of staphylococci in oral cavity and skin of healthy individuals were investigated in northern Japan. METHODS: Saliva from oral cavity and swab from skin surface of hand were collected and cultured on selective media. Species of the isolates were identified genetically, and ST was determined for S. aureus and S. argenteus. Genes associated with antimicrobial resistance were detected by PCR. RESULTS: Among 166 participants, a total of 75 S. aureus isolates were obtained from 61 individuals (37 %), and recovered more frequently in oral cavity (n = 48) than skin (n = 27). Among 23 STs identified in S. aureus isolates, ST8 (CC8), ST15 (CC15), and ST188 (CC1) were the most common (10 isolates each), with STs of CC1 being dominant (17 isolates). Methicillin-resistant S. aureus (MRSA) was isolated in the skin of two individuals and belonged to ST1 and ST6. Resistance to erythromycin and gentamicin associated with erm(A) and aac(6')-Ie-aph(2")-Ia, respectively, was more commonly found in ST5 and ST8 isolates. One S. argenteus isolate (ST2250, mecA-negative) was recovered from oral cavity of a participant (0.6 %). A total of 186 isolates of coagulase-negative staphylococci (CoNS) were recovered from 102 participants and identified into 14 species, with S. warneri being the most common (n = 52), followed by S. capitis (n = 42), S. saprophyticus (n = 20) and S. haemolyticus (n = 19). mecA was detected in S. saprophyticus, S. haemolyticus, and S. caprae, while arginine-catabolic mobile element (ACME) in only S. capitis and S. epidermidis. CONCLUSION: S. aureus was more prevalent in oral cavity than skin surface, belonging to three major STs, with CC1 being a dominant lineage. The prevalence of antimicrobial resistance was distinct depending on CoNS species.


Subject(s)
Anti-Bacterial Agents , Drug Resistance, Bacterial , Mouth , Skin , Staphylococcal Infections , Staphylococcus , Japan/epidemiology , Staphylococcus/drug effects , Staphylococcus/genetics , Staphylococcus/isolation & purification , Staphylococcal Infections/epidemiology , Staphylococcal Infections/microbiology , Mouth/microbiology , Skin/microbiology , Saliva/microbiology , Drug Resistance, Bacterial/genetics , Bacterial Typing Techniques , Anti-Bacterial Agents/pharmacology , Prevalence , Humans , Child, Preschool , Child , Adolescent , Young Adult , Adult , Middle Aged , Aged , Aged, 80 and over
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