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1.
J Agric Food Chem ; 72(27): 15213-15227, 2024 Jul 10.
Article in English | MEDLINE | ID: mdl-38916250

ABSTRACT

Researchers often consider microorganisms from Stenotrophomonas sp. to be beneficial for plants. In this study, the biocidal effects and action mechanisms of volatile organic compounds (VOCs) produced by Stenotrophomonas sp. NAU1697 were investigated. The mycelial growth and spore germination of Fusarium oxysporum f. sp. cucumerinum (FOC), which is a pathogen responsible for cucumber wilt disease, were significantly inhibited by VOCs emitted from NAU1697. Among the VOCs, 33 were identified, 11 of which were investigated for their antifungal properties. Among the tested compounds, 2-ethylhexanol exhibited the highest antifungal activity toward FOC, with a minimum inhibitory volume (MIV) of 3.0 µL/plate (equal to 35.7 mg/L). Damage to the hyphal cell wall and cell membrane integrity caused a decrease in the ergosterol content and a burst of reactive oxygen species (ROS) after 2-ethylhexanol treatment. DNA damage, which is indicative of apoptosis-like cell death, was monitored in 2-ethylhexanol-treated FOC cells by using micro-FTIR analysis. Furthermore, the activities of mitochondrial dehydrogenases and mitochondrial respiratory chain complex III in 2-ethylhexanol-treated FOC cells were significantly decreased. The transcription levels of genes associated with redox reactions and the cell wall integrity (CWI) pathway were significantly upregulated, thus indicating that stress was caused by 2-ethylhexanol. The findings of this research provide a new avenue for the sustainable management of soil-borne plant fungal diseases.


Subject(s)
Fungicides, Industrial , Fusarium , Hexanols , Plant Diseases , Stenotrophomonas , Volatile Organic Compounds , Fusarium/drug effects , Fusarium/growth & development , Volatile Organic Compounds/pharmacology , Volatile Organic Compounds/chemistry , Plant Diseases/microbiology , Fungicides, Industrial/pharmacology , Fungicides, Industrial/chemistry , Hexanols/pharmacology , Hexanols/chemistry , Stenotrophomonas/drug effects , Stenotrophomonas/genetics , Stenotrophomonas/metabolism , Reactive Oxygen Species/metabolism , Microbial Sensitivity Tests
2.
Curr Microbiol ; 80(3): 93, 2023 Feb 02.
Article in English | MEDLINE | ID: mdl-36729340

ABSTRACT

Stenotrophomonas maltophilia is a ubiquitous multidrug-resistant opportunistic pathogen commonly associated with nosocomial infections. The purpose of this study was to isolate and characterize extended-spectrum beta-lactamase (ESBL) producing bacteria from painted turtles (Chrysemys picta) living in the wild and captured in southeastern Wisconsin. Fecal samples from ten turtles were examined for ESBL producing bacteria after incubation on HardyCHROM™ ESBL agar. Two isolates were cultivated and identified by 16S rRNA gene sequencing and whole genome sequencing (WGS) as Stenotrophomonas sp. 9A and S. maltophilia 15A. They were multidrug-resistant, as determined by antibiotic susceptibility testing. Stenotrophomonas sp. 9A was found to produce an extended spectrum beta-lactamase (ESBL) and both isolates were found to be carbapenem-resistant. EDTA-modified carbapenem inactivation method (eCIM) and the modified carbapenem inactivation method (mCIM) tests were used to examine the carbapenemase production and the test results were negative. Through WGS several antimicrobial resistance genes were identified in S. maltophilia 15A. For example a chromosomal L1 ß-lactamase gene, which is known to hydrolyze carbapenems, a L2 ß-lactamase gene, genes for the efflux systems smeABC and smeDEF and the aminoglycosides resistance genes aac(6')-lz and aph(3')-llc were found. An L2 ß-lactamase gene in Stenotrophomonas sp. 9A was identified through WGS.


Subject(s)
Drug Resistance, Multiple, Bacterial , Stenotrophomonas , Turtles , Animals , Anti-Bacterial Agents/pharmacology , Bacterial Proteins/genetics , beta-Lactamases/genetics , Carbapenems , Drug Resistance, Multiple, Bacterial/genetics , Microbial Sensitivity Tests , RNA, Ribosomal, 16S/genetics , Stenotrophomonas/drug effects , Stenotrophomonas/genetics , Turtles/microbiology
3.
Arch Microbiol ; 203(5): 2699-2709, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33715030

ABSTRACT

In this study, a higher metal ions-resistant bacterium, Stenotrophomonas rhizophila JC1 was isolated from contaminated soil in Jinchang city, Gansu Province, China. The Pb2+ (120 mg/L) and Cu2+ (80 mg/L) removal rate of the strain reached at 76.9% and 83.4%, respectively. The genome comprises 4268161 bp in a circular chromosome with 67.52% G + C content and encodes 3719 proteins. The genome function analysis showed czc operon, mer operon, cop operon, arsenic detoxification system in strain JC1 were contributed to the removal of heavy metals. Three efflux systems (i.e., RND, CDF, and P-ATPase) on strain JC1 genome could trigger the removal of divalent cations from cells. cAMP pathway and ABC transporter pathway might be involved in the transport and metabolism of heavy metals. The homology analysis exhibited multi-gene families such as ABC transporters, heavy metal-associated domain, copper resistance protein, carbohydrate-binding domain were distributed across 410 orthologous groups. In addition, heavy metal-responsive transcription regulator, thioredoxin, heavy metal transport/detoxification protein, divalent-cation resistance protein CutA, arsenate reductase also played important roles in the heavy metals adsorption and detoxification process. The complete genome data provides insight into the exploration of the interaction mechanism between microorganisms and heavy metals.


Subject(s)
Membrane Transport Proteins/genetics , Metals, Heavy/metabolism , Metals, Heavy/toxicity , Stenotrophomonas/genetics , Stenotrophomonas/metabolism , Base Composition/genetics , China , Inactivation, Metabolic/genetics , Inactivation, Metabolic/physiology , Soil/chemistry , Stenotrophomonas/drug effects , Whole Genome Sequencing
4.
Microbiologyopen ; 9(6): 1247-1263, 2020 06.
Article in English | MEDLINE | ID: mdl-32246583

ABSTRACT

Carbapenems are last-resort ß-lactam antibiotics used in healthcare facilities to treat multidrug-resistant infections. Thus, most studies on identifying and characterizing carbapenem-resistant bacteria (CRB) have focused on clinical settings. Relatively, little is still known about the distribution and characteristics of CRBs in the environment, and the role of soil as a potential reservoir of CRB in the United States remains unknown. Here, we have surveyed 11 soil samples from 9 different urban or agricultural locations in the Los Angeles-Southern California area to determine the prevalence and characteristics of CRB in these soils. All samples tested contained CRB with a frequency of <10 to 1.3 × 104  cfu per gram of soil, with most agricultural soil samples having a much higher relative frequency of CRB than urban soil samples. Identification and characterization of 40 CRB from these soil samples revealed that most of them were members of the genera Cupriavidus, Pseudomonas, and Stenotrophomonas. Other less prevalent genera identified among our isolated CRB, especially from agricultural soils, included the genera Enterococcus, Bradyrhizobium, Achromobacter, and Planomicrobium. Interestingly, all of these carbapenem-resistant isolates were also intermediate or resistant to at least 1 noncarbapenem antibiotic. Further characterization of our isolated CRB revealed that 11 Stenotrophomonas, 3 Pseudomonas, 1 Enterococcus, and 1 Bradyrhizobium isolates were carbapenemase producers. Our findings show for the first time that both urban and agricultural soils in Southern California are an underappreciated reservoir of bacteria resistant to carbapenems and other antibiotics, including carbapenemase-producing CRB.


Subject(s)
Bacterial Proteins/genetics , Cupriavidus/genetics , Drug Resistance, Bacterial/genetics , Pseudomonas/genetics , Stenotrophomonas/genetics , beta-Lactamases/genetics , Anti-Bacterial Agents/pharmacology , California , Carbapenems/pharmacology , Cupriavidus/drug effects , Cupriavidus/isolation & purification , Humans , Los Angeles , Microbial Sensitivity Tests , Pseudomonas/drug effects , Pseudomonas/isolation & purification , Soil , Soil Microbiology , Stenotrophomonas/drug effects , Stenotrophomonas/isolation & purification
5.
Afr Health Sci ; 20(1): 168-181, 2020 Mar.
Article in English | MEDLINE | ID: mdl-33402905

ABSTRACT

BACKGROUND: Stenotrophomonas species are multi-resistant bacteria with ability to cause opportunistic infections. OBJECTIVE: We isolated 45 Stenotrophomonas species from soil, sewage and the clinic with the aim of investigating their susceptibility to commonly used antimicrobial agents. METHODOLOGY: The identities of isolates were confirmed with 16S rRNA gene sequence and MALDI-TOF analysis. Anti-microbial resistance, biofilm production and clonal diversity were also evaluated. The minimum inhibitory concentration technique as described by Clinical & Laboratory Standards Institute: CLSI Guidelines (CLSI) was employed for the evaluation of isolate susceptibility to antibiotics. RESULT: Forty-five Stenotrophomonas species which include 36 environmental strains and 9 clinical strains of S. maltophilia were considered in this study. 32 (88.9 %) environmental strains were identified to be S. maltophilia, 2 (5.6 %) were Stenotrophomonas nitritireducens, and 2 (5.6 %) cluster as Stenotrophomonas spp. Stenotrophomonas isolates were resistant to at least six of the antibiotics tested, including Trimethoprim/Sulfamethoxazole (SXT). CONCLUSION: Environmental isolates from this study were resistant to SXT which is commonly used for the treatment of S. maltophilia infections. This informs the need for good public hygiene as the environment could be a reservoir of multi-resistant bacteria. It also buttresses the importance of surveillance study in the management of bacterial resistance.


Subject(s)
Anti-Bacterial Agents/pharmacology , Gram-Negative Bacterial Infections/drug therapy , Mass Spectrometry/methods , Sewage/microbiology , Stenotrophomonas/drug effects , Stenotrophomonas/isolation & purification , Trimethoprim, Sulfamethoxazole Drug Combination/therapeutic use , Bacterial Proteins/genetics , Biofilms/drug effects , Humans , Mexico , Microbial Sensitivity Tests , Phylogeny , Polymerase Chain Reaction , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Soil Microbiology , Stenotrophomonas/classification , Stenotrophomonas/genetics
6.
Arch Microbiol ; 202(2): 225-232, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31598755

ABSTRACT

Amoxicillin-resistant bacteria were isolated using selective enrichment procedure. The morphological, biochemical and molecular characterization based on 16S rRNA gene sequencing and phylogenetic analysis of the bacterial strain WA5 confirmed that the strain belongs to the genus Stenotrophomonas. The bacteria were named as Stenotrophomonas sp. strain WA5 (MK110499). Substantial growth was seen in M9 minimal media supplemented with 5 mg L-1 of amoxicillin as a sole source of carbon and energy. RNA yield was also observed to be decreased in the presence of amoxicillin. Amoxicillin (5 mg L-1)-induced alteration is seen on bacterial protein profile and unique polypeptide bands were seen to be induced in the presence of amoxicillin, the bands were subjected to trypsin digestion, and LC-MS/MS analysis showed that the bands belong to the family of DNA-dependent RNA polymerase subunit ß (rpoC). Plasmid DNA isolation indicated the presence of antibiotic-resistant genes being harboured by the plasmid.


Subject(s)
Amoxicillin/metabolism , Anti-Bacterial Agents/metabolism , DNA-Directed RNA Polymerases/metabolism , Stenotrophomonas/drug effects , Stenotrophomonas/metabolism , Water Pollutants, Chemical/metabolism , Amoxicillin/pharmacology , Anti-Bacterial Agents/pharmacology , Bacterial Proteins/genetics , Biodegradation, Environmental , Chromatography, Liquid , DNA, Bacterial/genetics , DNA-Directed RNA Polymerases/genetics , Penicillin Resistance/genetics , Phylogeny , Plasmids/genetics , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Soil Microbiology , Stenotrophomonas/genetics , Tandem Mass Spectrometry
7.
Article in English | MEDLINE | ID: mdl-31611364

ABSTRACT

We tested the in vitro activities of ceftazidime-avibactam, ceftolozane-tazobactam, meropenem-vaborbactam, piperacillin-tazobactam, and 11 other antimicrobial agents against 420 Burkholderia, Achromobacter, Stenotrophomonas, and Pandoraea strains, 89% of which were cultured from respiratory specimens from persons with cystic fibrosis. Among the ß-lactam-ß-lactamase inhibitor agents, meropenem-vaborbactam had the greatest activity against Burkholderia and Achromobacter, including multidrug-resistant and extensively-drug-resistant strains. None of the newer ß-lactam-ß-lactamase combination drugs showed increased activity compared to that of the older agents against Stenotrophomonas maltophilia or Pandoraea spp.


Subject(s)
Anti-Bacterial Agents/pharmacology , Cystic Fibrosis/microbiology , beta-Lactamase Inhibitors/pharmacology , Achromobacter/drug effects , Boronic Acids/pharmacology , Burkholderia/drug effects , Humans , Meropenem/pharmacology , Microbial Sensitivity Tests , Piperacillin/pharmacology , Pseudomonas aeruginosa/drug effects , Stenotrophomonas/drug effects , Stenotrophomonas maltophilia/drug effects , Tazobactam/pharmacology
8.
PLoS One ; 14(8): e0221099, 2019.
Article in English | MEDLINE | ID: mdl-31425544

ABSTRACT

The pinewood nematode (PWN), Bursaphelenchus xylophilus, is an important plant-parasitic nematode that can cause severe mortality of pine trees. This PWN-induced harm to plants may be closely related to the abundance and diversity of the symbiotic microorganisms of the parasitic nematode. In this study, nematodes were divided into untreated and antibiotic-treated groups. Nematodes were treated by fumigation with different amounts of α-pinene, and the resultant mortality rates were analyzed statistically. Concentrations of symbiotic bacteria were calculated as colony-forming units per nematode. High-throughput sequencing was used to investigate the bacterial community structure. The results showed that the mortality of nematodes increased slightly with an increasing concentration of α-pinene, and nematodes untreated with antibiotics were more sensitive to α-pinene than those treated with antibiotics. The highest abundance of symbiotic bacteria was obtained via medium and low levels of α-pinene, but for which community diversity was the lowest (Shannon and Simpson indexes). The proportion of Pseudomonas spp. in the symbiotic bacteria of nematodes without antibiotics was relatively high (more than 70%), while that of Stenotrophomonas spp. was low (6%-20%). However, the proportion of Stenotrophomonas spp. was larger than that of Pseudomonas spp in the symbiotic bacteria associated with the antibiotic-treated nematodes. Pseudomonas sp. increased after pinene treatment, whereas Stenotrophomonas spp. decreased. These results indicate that although α-pinene has low toxicity to PWNs over a short time period, α-pinene ultimately influences the abundance and community diversity of the symbiotic bacteria of these nematodes; this influence may potentially disturb the development and reproduction of nematodes in the process of infecting pine trees.


Subject(s)
Bicyclic Monoterpenes/administration & dosage , Pinus/parasitology , Plant Diseases/prevention & control , Pseudomonas/drug effects , Rhabditida/drug effects , Stenotrophomonas/drug effects , Animals , Bicyclic Monoterpenes/toxicity , Colony Count, Microbial , DNA, Bacterial/isolation & purification , Dose-Response Relationship, Drug , Fumigation , Plant Diseases/parasitology , Pseudomonas/genetics , Pseudomonas/isolation & purification , Rhabditida/microbiology , Stenotrophomonas/genetics , Stenotrophomonas/isolation & purification , Symbiosis/drug effects
9.
Cells ; 8(4)2019 04 03.
Article in English | MEDLINE | ID: mdl-30987227

ABSTRACT

A largely understudied microbially mediated mercury (Hg) bioremediative pathway includes the volatilization of Hg2+ to Hg°. Therefore, studies on Hg resistant bacteria (HgR), isolated from historically long-term contaminated environments, can serve as models to understand mechanisms underpinning Hg cycling. Towards this end, a mercury resistant bacterial strain, identified as Stenotrophomonas sp., strain MA5, was isolated from Mill Branch on the Savannah River Site (SRS); an Hg-impacted ecosystem. Minimum inhibitory concentration (MIC) analysis showed Hg resistance of up to 20 µg/mL by MA5 with 95% of cells retaining viability. Microcosm studies showed that the strain depleted more than 90% of spiked Hg2+ within the first 24 h of growth and the detection of volatilized mercury indicated that the strain was able to reduce Hg2+ to Hg°. To understand molecular mechanisms of Hg volatilization, a draft whole genome sequence was obtained, annotated and analyzed, which revealed the presence of a transposon-derived mer operon (merRTPADE) in MA5, known to transport and reduce Hg2+ into Hg°. Based on the whole genome sequence of strain MA5, qRT-PCR assays were designed on merRTPADE, we found a ~40-fold higher transcription of merT, P, A, D and E when cells were exposed to 5 µg/mL Hg2+. Interestingly, strain MA5 increased cellular size as a function of increasing Hg concentrations, which is likely an evolutionary response mechanism to cope with Hg stress. Moreover, metal contaminated environments are shown to co-select for antibiotic resistance. When MA5 was screened for antibiotic resistance, broad resistance against penicillin, streptomycin, tetracycline, ampicillin, rifampicin, and erythromycin was found; this correlated with the presence of multiple gene determinants for antibiotic resistance within the whole genome sequence of MA5. Overall, this study provides an in-depth understanding of the underpinnings of Stenotrophomonas-mercury interactions that facilitate cellular survival in a contaminated soil habitat.


Subject(s)
Mercury/toxicity , Rivers/microbiology , Stenotrophomonas/drug effects , Stenotrophomonas/isolation & purification , Anti-Bacterial Agents/pharmacology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Drug Resistance, Microbial/drug effects , Genes, Bacterial , Mercury/isolation & purification , Microbial Sensitivity Tests , Microbial Viability/drug effects , Stenotrophomonas/genetics , Stenotrophomonas/growth & development , Stress, Physiological/drug effects , Transcription, Genetic/drug effects , Volatilization
10.
Curr Microbiol ; 75(11): 1484-1492, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30109428

ABSTRACT

Stenotrophomonas MB339, a bacterium, which could potentially utilize aromatic compounds and tolerate different heavy metals was isolated from industrial wastewater. Subsequent experiments revealed strains ability to resist antibiotics ofloxacin, streptomycin, rifampicillin, erythromycin, ampicillin, clindamycin, and toxicants including As2+, Hg2+, Cu2+, Ni2+, Pb2+. The shotgun sequencing strategy, genome assembly and annotation uncovered specific features, which make this strain MB339 effectively promising to cope with highly contaminated conditions. This report presents isolate's assembled genome and its functional annotation identifying a set of protein coding genes (4711), tRNA (69 genes), and rRNA (9 genes). More than 2900 genes were assigned to various Clusters of Orthologous Groups (COGs) and 1114 genes attributed to 37 different Koyoto Encyclopedia of Genes and Genomes (KEGGs) pathways. Among these annotated genes, eighteen were for key enzymes taking part in xenobiotic degradation. Furthermore, 149 genes have been assigned to virulence, disease, and defense mechanisms responsible for multidrug and metal resistance including mercury, copper, and arsenic operons. These determinants comprised genes for membrane proteins, efflux pumps, and metal reductases, suggesting its potential applications in bioremediation.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacterial Proteins/genetics , Stenotrophomonas/drug effects , Stenotrophomonas/metabolism , Wastewater/microbiology , Xenobiotics/metabolism , Bacterial Proteins/metabolism , Biodegradation, Environmental , Drug Resistance, Bacterial , Genes, Essential , Genome, Bacterial , Metals, Heavy/metabolism , Multigene Family , Stenotrophomonas/genetics , Stenotrophomonas/isolation & purification
11.
Adv Clin Exp Med ; 27(3): 401-407, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29533544

ABSTRACT

BACKGROUND: The impact of multidrug-resistant organisms (MDROs), including non-fermentative bacilli (NFBs), is rising and underestimated, especially in intensive care units (ICUs). The growing prevalence of multidrug resistance (MDR) and extensive drug resistance (XDR) is challenging for clinicians, as the treatment options are limited. OBJECTIVES: The purpose of this study was to analyze the extent of the epidemiological problem of multidrugresistant, extensively drug-resistant and pandrug-resistant (PDR) non-fermentative bacilli isolated from pneumonia and bloodstream infections (BSIs) in patients hospitalized in southern Poland. MATERIAL AND METHODS: This study included 253 NFBs belonging to Acinetobacter sp. (ACI), Pseudomonas sp. (PAR), and Stenotrophomonas sp. (STM). The microorganisms were identified, and susceptibility testing was performed using a semi-automatic system. The different patterns of resistance were defined as MDR, XDR, or PDR strains. Epidemiological typing of A. baumannii from ICUs was performed by repetitive polymerase chain reaction (rep-PCR). RESULTS: More than half of the strains (57.7%) were isolated within ICUs. ACI-strains came significantly more often from ICU wards. The highest prevalence of ACI and PAR was found in pneumonia, whereas STM dominated in BSIs. ACIs were more frequently resistant than other pathogens to all studied antibiotics except colistin (n = 76; 58.9%), and they belonged to the XDR category. DiversiLab demonstrated the presence of 2 dominant clones in the ACI group, both classified as European Clone 2 (EUII). CONCLUSIONS: Our results indicate serious potential therapeutic problems related to high antibiotic resistance of ACI isolates. The stratification of drug resistance (MDR/XDR/PDR) may become an important tool for the assessment of public health epidemiology and microbiological hazards at the local, national, and international level. It allows clear presentation of the issues concerning the epidemiology of highly resistant bacilli, and the exchange of information between medical staff and local representatives of public health for the implementation of effective measures to reduce drug resistance.


Subject(s)
Acinetobacter Infections/diagnosis , Acinetobacter baumannii/drug effects , Anti-Bacterial Agents/therapeutic use , Drug Resistance, Multiple, Bacterial , Gram-Negative Bacterial Infections/drug therapy , Pseudomonas/drug effects , Stenotrophomonas/drug effects , Acinetobacter Infections/epidemiology , Acinetobacter baumannii/isolation & purification , Anti-Bacterial Agents/pharmacology , Colistin/pharmacology , Gram-Negative Bacterial Infections/diagnosis , Gram-Negative Bacterial Infections/epidemiology , Humans , Microbial Sensitivity Tests , Poland/epidemiology , Prevalence , Pseudomonas/isolation & purification , Pseudomonas Infections/diagnosis , Pseudomonas Infections/epidemiology , Stenotrophomonas/isolation & purification
12.
J Water Health ; 15(5): 813-822, 2017.
Article in English | MEDLINE | ID: mdl-29040083

ABSTRACT

Although Vietnamese residents frequently harbor extended-spectrum ß-lactamase-producing Escherichia coli (ESBL-E), it is unclear which foods/beverages are risk factors for acquiring these bacteria. The aim of this study was to evaluate the frequency with which edible ice served in restaurants is contaminated with antibiotic-resistant bacteria, and thereby clarify whether this product poses a risk for ESBL-E carriage in humans. Ice from restaurants in Vietnam and Japan was screened for bacteria capable of growing on agar containing cefotaxime (BG-CTX). Of the 119 BG-CTX strains isolated in Vietnam, 40%, 39%, and 12% were identified as Pseudomonas spp., Acinetobacter spp., and Stenotrophomonas maltophilia, respectively. Meanwhile, of the six such strains isolated in Japan, five were identified as Acinetobacter spp. and one as Pseudomonas spp. More than 10% of the Acinetobacter isolates exhibited cefotaxime, ceftazidime, and sulfa/trimethoprim resistance, while 21% of Pseudomonas and 14% of S. maltophilia isolates exhibited meropenem and sulfa/trimethoprim resistance, respectively. Subsequent multiplex polymerase chain reaction (PCR) analyses detected ESBL-encoding genes in 10% of the BG-CTX. Notably, feces harvested from mice administered water contaminated with BG-CTX contained E. coli harboring the blaCTX-M-9 gene. In conclusion, our findings indicate that consumption of contaminated edible ice is a risk factor for human ESBL-E carriage.


Subject(s)
Acinetobacter/isolation & purification , Escherichia coli/physiology , Feces/microbiology , Food Microbiology , Ice , Pseudomonas/isolation & purification , Stenotrophomonas/isolation & purification , Acinetobacter/drug effects , Anti-Bacterial Agents/pharmacology , Cefotaxime/pharmacology , Drug Resistance, Bacterial , Escherichia coli/drug effects , Humans , Japan , Pseudomonas/drug effects , Restaurants , Risk Factors , Stenotrophomonas/drug effects , Vietnam , beta-Lactamases/metabolism
13.
Cont Lens Anterior Eye ; 40(3): 175-183, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28118996

ABSTRACT

PURPOSE: To determine the antimicrobial activity of the melimine derived peptide Mel4 against Delftia, Stenotrophomonas, Elizabethkingia, Burkholderia and to investigate biocompatibility of Mel4 as an antimicrobial coating on contact lenses in animals and humans. METHODS: In vitro antimicrobial activity of Mel4 was determined against the four Gram negative bacteria by investigating growth curves for 24h followed by viable counts to determine the minimum inhibitory concentration (MIC). Contact lenses were coated by covalently binding Mel4, characterized by amino acid analysis, and were investigated for changes in lens parameters. Safety of Mel-4 coated lenses were determined in a rabbit model of daily contralateral wear. A prospective, randomised, double-masked, contralateral, 1week daily wear human clinical trial was used to evaluate subjective responses and ocular physiology. RESULTS: Mel4 was active against all the bacteria tested (MIC50 ranged from 31-1000µgml-1) and produced an antimicrobial surface on contact lenses. Mel4-coating resulted hydrophilic surface without any significant change in contact lens parameters, and showed no signs of cytotoxicity or ocular irritation during rabbit wear. During human clinical trial, there were no differences between Mel4 coated and uncoated contact lenses in lens performance indicators and ocular signs such as corneal fluorescein staining. Mel4 and control uncoated lenses had no differences in ocular symptoms during lens wear. CONCLUSION: Mel4 has achieved antimicrobial activity against variety of Gram negative bacteria that are often resistant to the action of cationic peptides and have been implicated in contact lens related adverse events. Mel4-coated contact lenses were safe to wear.


Subject(s)
Antimicrobial Cationic Peptides/pharmacology , Burkholderia Infections/prevention & control , Burkholderia/drug effects , Coated Materials, Biocompatible/chemistry , Contact Lenses/microbiology , Eye Infections, Bacterial/prevention & control , Stenotrophomonas/drug effects , Animals , Bacterial Adhesion/drug effects , Burkholderia/isolation & purification , Burkholderia Infections/microbiology , Disease Models, Animal , Equipment Contamination/prevention & control , Eye Infections, Bacterial/microbiology , Female , Gram-Negative Bacterial Infections/microbiology , Gram-Negative Bacterial Infections/prevention & control , Materials Testing/methods , Microbial Sensitivity Tests/methods , Prospective Studies , Rabbits , Stenotrophomonas/isolation & purification
14.
Appl Environ Microbiol ; 82(19): 5824-37, 2016 10 01.
Article in English | MEDLINE | ID: mdl-27451445

ABSTRACT

UNLABELLED: Insect larvae killed by entomopathogenic nematodes are thought to contain bacterial communities dominated by a single bacterial genus, that of the nematode's bacterial symbiont. In this study, we used next-generation sequencing to profile bacterial community dynamics in greater wax moth (Galleria mellonella) larvae cadavers killed by Heterorhabditis nematodes and their Photorhabdus symbionts. We found that, although Photorhabdus strains did initially displace an Enterococcus-dominated community present in uninfected G. mellonella insect larvae, the cadaver community was not static. Twelve days postinfection, Photorhabdus shared the cadaver with Stenotrophomonas species. Consistent with this result, Stenotrophomonas strains isolated from infected cadavers were resistant to Photorhabdus-mediated toxicity in solid coculture assays. We isolated and characterized a Photorhabdus-produced antibiotic from G. mellonella cadavers, produced it synthetically, and demonstrated that both the natural and synthetic compounds decreased G. mellonella-associated Enterococcus growth, but not Stenotrophomonas growth, in vitro Finally, we showed that the Stenotrophomonas strains described here negatively affected Photorhabdus growth in vitro Our results add an important dimension to a broader understanding of Heterorhabditis-Photorhabdus biology and also demonstrate that interspecific bacterial competition likely characterizes even a theoretically monoxenic environment, such as a Heterorhabditis-Photorhabdus-parasitized insect cadaver. IMPORTANCE: Understanding, and eventually manipulating, both human and environmental health depends on a complete accounting of the forces that act on and shape microbial communities. One of these underlying forces is hypothesized to be resource competition. A resource that has received little attention in the general microbiological literature, but likely has ecological and evolutionary importance, is dead/decaying multicellular organisms. Metazoan cadavers, including those of insects, are ephemeral and nutrient-rich environments, where resource competition might shape interspecific macrobiotic and microbiotic interactions. This study is the first to use a next-generation sequencing approach to study the community dynamics of bacteria within a model insect cadaver system: insect larvae parasitized by entomopathogenic nematodes and their bacterial symbionts. By integrating bioinformatic, biochemical, and classic in vitro microbiological approaches, we have provided mechanistic insight into how antibiotic-mediated bacterial interactions may shape community dynamics within insect cadavers.


Subject(s)
Anti-Bacterial Agents/pharmacology , Microbiota , Moths/microbiology , Moths/parasitology , Photorhabdus/physiology , Rhabditida/physiology , Stilbenes/pharmacology , Animals , Anti-Bacterial Agents/isolation & purification , Cadaver , Larva/growth & development , Larva/microbiology , Larva/parasitology , Microbiota/drug effects , Microbiota/genetics , Moths/growth & development , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Stenotrophomonas/drug effects , Stilbenes/isolation & purification
15.
Semin Respir Crit Care Med ; 36(1): 99-110, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25643274

ABSTRACT

Stenotrophomonas maltophilia, Achromobacter xylosoxidans, and nonmelioid Burkholderia species, namely, Burkholderia cepacia complex, collectively are a group of troublesome nonfermenters. Although not inherently virulent organisms, these environmental Gram negatives can complicate treatment in those who are immunocompromised, critically ill in the intensive care unit and those patients with suppurative lung disease, such as cystic fibrosis. Through a range of intrinsic antimicrobial resistance mechanisms, virulence factors, and the ability to survive in biofilms, these opportunistic pathogens are well suited to persist, both in the environment and the host. Treatment recommendations are hindered by the difficulties in laboratory identification, the lack of reproducibility of antimicrobial susceptibility testing, the lack of clinical breakpoints, and the absence of clinical outcome data. Despite trimethoprim-sulfamethoxazole often being the mainstay of treatment, resistance is widely encountered, and alternative regimens, including combination therapy, are often used. This review will highlight the important aspects and unique challenges that these three nonfermenters pose, and, in the absence of clinical outcome data, our therapeutic recommendations will be based on reported antimicrobial susceptibility and pharmacokinetic/pharmacodynamic profiles.


Subject(s)
Achromobacter/drug effects , Burkholderia/drug effects , Drug Resistance, Bacterial , Stenotrophomonas/drug effects , Achromobacter/pathogenicity , Anti-Bacterial Agents/therapeutic use , Burkholderia/pathogenicity , Burkholderia Infections/drug therapy , Burkholderia Infections/microbiology , Gram-Negative Bacterial Infections/drug therapy , Gram-Negative Bacterial Infections/microbiology , Humans , Stenotrophomonas/pathogenicity
16.
Braz J Microbiol ; 45(2): 627-31, 2014.
Article in English | MEDLINE | ID: mdl-25242950

ABSTRACT

Biofilm formation depends on several factors. The influence of different osmolarities on bacterial biofilm formation was studied. Two strains (Enterobacter sp. and Stenotrophomonas sp.) exhibited the most remarkable alterations. Biofilm formation is an important trait and its use has been associated to the protection of organisms against environmental stresses.


Subject(s)
Biofilms/drug effects , Enterobacter/drug effects , Enterobacter/physiology , Stenotrophomonas/drug effects , Stenotrophomonas/physiology , Osmolar Concentration , Sodium Chloride/metabolism , Sorbitol/metabolism
17.
Braz. j. microbiol ; 45(2): 627-631, Apr.-June 2014. ilus, graf, tab
Article in English | LILACS | ID: lil-723127

ABSTRACT

Biofilm formation depends on several factors. The influence of different osmolarities on bacterial biofilm formation was studied. Two strains (Enterobacter sp. and Stenotrophomonas sp.) exhibited the most remarkable alterations. Biofilm formation is an important trait and its use has been associated to the protection of organisms against environmental stresses.


Subject(s)
Biofilms/drug effects , Enterobacter/drug effects , Enterobacter/physiology , Stenotrophomonas/drug effects , Stenotrophomonas/physiology , Osmolar Concentration , Sodium Chloride/metabolism , Sorbitol/metabolism
18.
Environ Sci Pollut Res Int ; 21(18): 11054-65, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24849374

ABSTRACT

Cadmium usually hampers plant growth, but bacterial inoculation may improve stress tolerance in plants to Cd by involving various mechanisms. The objective was to characterize and identify bacteria that improve plant growth under Cd stress and reduce Cd uptake. Cadmium-tolerant bacteria were isolated from rhizosphere soil, which was irrigated with tannery effluent, and six strains were selected as highly tolerant to Cd, showing minimum inhibitory concentration as 500 mg L(-1) or 4.45 mmol L(-1). These strains were identified by 16S rRNA gene analysis and functional analysis in regard to plant growth promotion characteristics. To determine their effect on cereal growth under Cd stress, seeds were inoculated with these strains individually and grown in soil contaminated with three Cd levels (0, 40 and 80 mg kg(-1)). Biomass production, relative water content (RWC), electrolyte leakage (ELL) and tissue Cd concentration were measured. Biomass of both cereals was inhibited strongly when exposed to Cd; however, bacterial inoculation significantly reduced the suppressive effect of Cd on cereal growth and physiology. The bacterial isolates belonged to the genera Klebsiella, Stenotrophomonas, Bacillus and Serratia. Maize was more sensitive than wheat to Cd. Klebsiella sp. strain CIK-502 had the most pronounced effects in promoting maize and wheat growth and lowering Cd uptake under Cd stress.


Subject(s)
Cadmium/pharmacology , Soil Pollutants/pharmacology , Triticum/growth & development , Zea mays/growth & development , Adaptation, Physiological , Bacillus/drug effects , Bacillus/genetics , Bacteria/drug effects , Biodegradation, Environmental , Klebsiella/drug effects , Klebsiella/genetics , Microbial Sensitivity Tests , Molecular Typing , Plant Roots/drug effects , Plant Roots/growth & development , RNA, Ribosomal, 16S/genetics , Rhizosphere , Serratia/drug effects , Serratia/genetics , Soil/chemistry , Soil Microbiology , Stenotrophomonas/drug effects , Stenotrophomonas/genetics , Triticum/drug effects , Zea mays/drug effects
19.
PLoS One ; 8(8): e70887, 2013.
Article in English | MEDLINE | ID: mdl-23990916

ABSTRACT

Antibiotic resistance and microbiota within edible snow crabs are important for the Chionoecetes (snow crab) fishing industry. We investigated these parameters using culture methods and antibiotic susceptibility tests with six internal organs from three species of Chionoecetes. Each sample revealed many unexpected microbial species within Chionoecetes internal organs. On the basis of 16S rRNA sequence analysis of 381 isolates, the most abundant genera identified in Chionoecetes opilio were Acinetobacter spp. (24%), Bacillus spp. (4%), Pseudomonas spp. (34%), Stenotrophomonas spp. (28%), and Agreia spp. (11%). In Chionoecetes sp. crabs, Acinetobacter spp. (23%), Bacillus spp. (12%), and Psychrobacter spp. (20%) were most prevalent, while Agreia spp. (11%), Bacillus spp. (31%), Microbacterium spp. (10%), Rhodococcus spp. (12%), and Agrococcus spp. (6%) were most abundant in C. japonicus. Our antibiotic resistance test found resistance to all nine antibiotics tested in 19, 14, and two of the isolates from C. opilio, Chionoecetes sp., and, C. japonicus respectively. Our results are the first to show that microbes with antibiotic resistance are widely distributed throughout the internal organs of natural snow crabs.


Subject(s)
Brachyura/microbiology , Drug Resistance, Bacterial , Acinetobacter/drug effects , Acinetobacter/genetics , Animals , Anti-Bacterial Agents/pharmacology , Bacillus/drug effects , Bacillus/genetics , DNA Primers , Phylogeny , Polymerase Chain Reaction , Pseudomonas/drug effects , Pseudomonas/genetics , Psychrobacter/drug effects , Psychrobacter/genetics , RNA, Ribosomal, 16S/genetics , Rhodococcus/drug effects , Rhodococcus/genetics , Sequence Analysis, DNA , Species Specificity , Stenotrophomonas/drug effects , Stenotrophomonas/genetics
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