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Nat Commun ; 11(1): 2866, 2020 06 08.
Article in English | MEDLINE | ID: mdl-32513959

ABSTRACT

The Cullin 5 (CUL5) Ring E3 ligase uses adaptors Elongins B and C (ELOB/C) to bind different SOCS-box-containing substrate receptors, determining the substrate specificity of the ligase. The 18-member ankyrin and SOCS box (ASB) family is the largest substrate receptor family. Here we report cryo-EM data for the substrate, creatine kinase (CKB) bound to ASB9-ELOB/C, and for full-length CUL5 bound to the RING protein, RBX2, which binds various E2s. To date, no full structures are available either for a substrate-bound ASB nor for CUL5. Hydrogen-deuterium exchange (HDX-MS) mapped onto a full structural model of the ligase revealed long-range allostery extending from the substrate through CUL5. We propose a revised allosteric mechanism for how CUL-E3 ligases function. ASB9 and CUL5 behave as rigid rods, connected through a hinge provided by ELOB/C transmitting long-range allosteric crosstalk from the substrate through CUL5 to the RBX2 flexible linker.


Subject(s)
Creatine Kinase/metabolism , Cryoelectron Microscopy , Elongin/metabolism , Suppressor of Cytokine Signaling Proteins/chemistry , Suppressor of Cytokine Signaling Proteins/metabolism , Allosteric Regulation , Creatine Kinase/ultrastructure , Cullin Proteins/chemistry , Cullin Proteins/metabolism , Elongin/ultrastructure , Humans , Models, Molecular , Protein Binding , Protein Subunits/chemistry , Protein Subunits/metabolism , Structure-Activity Relationship , Substrate Specificity , Suppressor of Cytokine Signaling Proteins/ultrastructure , Ubiquitin-Protein Ligases/chemistry , Ubiquitin-Protein Ligases/metabolism
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