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1.
Nat Protoc ; 6(6): 715-42, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21637194

ABSTRACT

Methods described in this paper are confined to in vitro dedifferentiated plant cell suspension cultures, which are convenient for the large-scale production of fine chemicals in bioreactors and for the study of cellular and molecular processes, as they offer the advantages of a simplified model system for the study of plants when compared with plants themselves or differentiated plant tissue cultures. The commonly used methods of initiation of a callus from a plant and subsequent steps from callus to cell suspension culture are presented in the protocol. This is followed by three different techniques for subculturing (by weighing cells, pipetting and pouring cell suspension) and four methods for growth measurement (fresh- and dry-weight cells, dissimilation curve and cell volume after sedimentation). The advantages and disadvantages of the methods are discussed. Finally, we provide a two-step (controlled rate) freezing technique also known as the slow (equilibrium) freezing method for long-term storage, which has been applied successfully to a wide range of plant cell suspension cultures.


Subject(s)
Cell Culture Techniques , Tabernaemontana/cytology , Botany/instrumentation , Cell Proliferation , Cryopreservation/methods , Plant Cells , Plants/genetics , Tabernaemontana/genetics
2.
Biochem Biophys Res Commun ; 362(4): 965-70, 2007 Nov 03.
Article in English | MEDLINE | ID: mdl-17767923

ABSTRACT

We report here the cloning and characterization of the entire cDNA of a papain-like cysteine protease from a tropical flowering plant. The 1098-bp ORF of the cDNA codify a protease precursor having a signal peptide of 19 amino acids, a cathepsin-L like N-terminal proregion of 114 amino acids, a mature enzyme part of 208 amino acids and a C-terminal proregion of 24 amino acids. The derived amino acid sequence of the mature part tallies with the thermostable cysteine protease Ervatamin-C--as was aimed at. The C-terminal proregion of the protease has altogether a different sequence pattern not observed in other members of the family and it contains a negatively charged helical zone. The three-dimensional model of the precursor, based on the homology modeling and X-ray structure, shows that the extended peptide stretch region of the N-terminal propeptide, covering the interdomain cleft, contains protruding side chains of positively charged residues. This study also indicates that the negatively charged zone of C-terminal propeptide may interact with the positively charged zone of the N-terminal propeptide in a cooperative manner in the maturation process of this enzyme.


Subject(s)
Cysteine Endopeptidases/chemistry , Cysteine Endopeptidases/ultrastructure , Models, Chemical , Models, Molecular , Tabernaemontana/metabolism , Amino Acid Sequence , Cloning, Molecular , Computer Simulation , Cysteine Endopeptidases/genetics , Cysteine Endopeptidases/metabolism , DNA, Complementary/genetics , Enzyme Stability , Isoenzymes/chemistry , Isoenzymes/genetics , Isoenzymes/metabolism , Isoenzymes/ultrastructure , Molecular Sequence Data , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/ultrastructure , Protein Conformation , Sequence Analysis, Protein , Sequence Homology, Nucleic Acid , Tabernaemontana/genetics , Temperature
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