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1.
J Microbiol Biotechnol ; 20(1): 21-9, 2010 Jan.
Article in English | MEDLINE | ID: mdl-20134229

ABSTRACT

The phenolic compounds are a major contaminant class often found in industrial wastewaters and the biological treatment is an alternative tool commonly employed for their removal. In this sense, monitoring microbial community dynamics is crucial for a successful wastewater treatment. This work aimed to monitor the structure and activity of the bacterial community during the operation of a laboratory-scale continuous submerged membrane bioreactor (SMBR), using PCR and RT-PCR followed by Denaturing Gradient Gel Electrophoresis (DGGE) and 16S rRNA libraries. Multivariate analyses carried out using DGGE profiles showed significant changes in the total and metabolically active dominant community members during the 4-week treatment period, explained mainly by phenol and ammonium input. Gene libraries were assembled using 16S rDNA and 16S rRNA PCR products from the fourth week of treatment. Sequencing and phylogenetic analyses of clones from 16S rDNA library revealed a high diversity of taxa for the total bacterial community, with predominance of Thauera genus (ca. 50%). On the other hand, a lower diversity was found for metabolically active bacteria, which were mostly represented by members of Betaproteobacteria (Thauera and Comamonas), suggesting that these groups have a relevant role in the phenol degradation during the final phase of the SMBR operation.


Subject(s)
Bacteria/isolation & purification , Biodiversity , Bioreactors/microbiology , Industrial Waste/analysis , Petroleum , Phenols/metabolism , Bacteria/classification , Bacteria/genetics , Bacteria/metabolism , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Molecular Sequence Data , Petroleum/analysis , Phylogeny , RNA, Ribosomal, 16S/genetics , Thauera/classification , Thauera/genetics , Thauera/isolation & purification , Thauera/metabolism
2.
Appl Environ Microbiol ; 71(9): 5642-5, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16151169

ABSTRACT

The nirS nitrite reductase genes were studied in two strains (strains 27 and 28) isolated from two denitrifying reactors and characterized as Thauera according to their 16S rRNA gene sequences. Strain 28 contains a single nirS sequence, which is related to the nirS of Thauera mechernichensis, and strain 27 contains two nirS sequences; one is similar to the nirS sequence from Thauera mechernichensis (gene 2), but the second one (gene 8) is from a separate clade with nirS from Pseudomonas stutzeri, Azoarcus species, Alcaligenes faecalis, and other Thauera species. Both genes were expressed, but gene 8 was constitutively expressed while gene 2 was positively regulated by nitrate.


Subject(s)
Bioreactors , Gene Expression Regulation, Bacterial , Nitrates/metabolism , Nitrite Reductases/genetics , Thauera/enzymology , Thauera/growth & development , DNA, Bacterial/analysis , Molecular Sequence Data , Nitrite Reductases/metabolism , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Thauera/genetics
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