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1.
Enzyme Microb Technol ; 170: 110305, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37595400

ABSTRACT

One of the key intermediates, 5-hydroxyvaleric acid (5-HV), is used in the synthesis of polyhydroxyalkanoate monomer, δ-valerolactone, 1,5-pentanediol (1,5-PDO), and many other substances. Due to global environmental problems, eco-friendly bio-based synthesis of various platform chemicals and key intermediates are socially required, but few previous studies on 5-HV biosynthesis have been conducted. To establish a sustainable bioprocess for 5-HV production, we introduced gabT encoding 4-aminobutyrate aminotransferase and yqhD encoding alcohol dehydrogenase to produce 5-HV from 5-aminovaleric acid (5-AVA), through glutarate semialdehyde in Escherichia coli whole-cell reaction. As, high reducing power is required to produce high concentrations of 5-HV, we newly introduced glucose dehydrogenase (GDH) for NADPH regeneration system from Bacillus subtilis 168. By applying GDH with D-glucose and optimizing the parameters, 5-HV conversion rate from 5-AVA increased from 47% (w/o GDH) to 82% when using 200 mM (23.4 g/L) of 5-AVA. Also, it reached 56% conversion in 2 h, showing 56 mM/h (6.547 g/L/h) productivity from 200 mM 5-AVA, finally reaching 350 mM (41 g/L) and 14.6 mM/h (1.708 g/L/h) productivity at 24 h when 1 M (117.15 g/L) 5-AVA was used. When the whole-cell system with GDH was expanded to produce 1,5-PDO, its production was also increased 5-fold. Considering that 5-HV and 1,5-PDO production depends heavily on the reducing power of the cells, we successfully achieved a significant increase in 5-HV and 1,5-PDO production using GDH.


Subject(s)
Escherichia coli , Industrial Microbiology , Valerates , Valerates/chemical synthesis , Escherichia coli/genetics , Escherichia coli/metabolism , Transaminases/genetics , Alcohol Dehydrogenase/genetics , NADP/metabolism , Biotransformation
2.
Molecules ; 26(4)2021 Feb 15.
Article in English | MEDLINE | ID: mdl-33672016

ABSTRACT

Reaction of 2,2'-bipyridine (2,2'-bipy) or 1,10-phenantroline (phen) with [Mn(Piv)2(EtOH)]n led to the formation of binuclear complexes [Mn2(Piv)4L2] (L = 2,2'-bipy (1), phen (2); Piv- is the anion of pivalic acid). Oxidation of 1 or 2 by air oxygen resulted in the formation of tetranuclear MnII/III complexes [Mn4O2(Piv)6L2] (L = 2,2'-bipy (3), phen (4)). The hexanuclear complex [Mn6(OH)2(Piv)10(pym)4] (5) was formed in the reaction of [Mn(Piv)2(EtOH)]n with pyrimidine (pym), while oxidation of 5 produced the coordination polymer [Mn6O2(Piv)10(pym)2]n (6). Use of pyrazine (pz) instead of pyrimidine led to the 2D-coordination polymer [Mn4(OH)(Piv)7(µ2-pz)2]n (7). Interaction of [Mn(Piv)2(EtOH)]n with FeCl3 resulted in the formation of the hexanuclear complex [MnII4FeIII2O2(Piv)10(MeCN)2(HPiv)2] (8). The reactions of [MnFe2O(OAc)6(H2O)3] with 4,4'-bipyridine (4,4'-bipy) or trans-1,2-(4-pyridyl)ethylene (bpe) led to the formation of 1D-polymers [MnFe2O(OAc)6L2]n·2nDMF, where L = 4,4'-bipy (9·2DMF), bpe (10·2DMF) and [MnFe2O(OAc)6(bpe)(DMF)]n·3.5nDMF (11·3.5DMF). All complexes were characterized by single-crystal X-ray diffraction. Desolvation of 11·3.5DMF led to a collapse of the porous crystal lattice that was confirmed by PXRD and N2 sorption measurements, while alcohol adsorption led to porous structure restoration. Weak antiferromagnetic exchange was found in the case of binuclear MnII complexes (JMn-Mn = -1.03 cm-1 for 1 and 2). According to magnetic data analysis (JMn-Mn = -(2.69 ÷ 0.42) cm-1) and DFT calculations (JMn-Mn = -(6.9 ÷ 0.9) cm-1) weak antiferromagnetic coupling between MnII ions also occurred in the tetranuclear {Mn4(OH)(Piv)7} unit of the 2D polymer 7. In contrast, strong antiferromagnetic coupling was found in oxo-bridged trinuclear fragment {MnFe2O(OAc)6} in 11·3.5DMF (JFe-Fe = -57.8 cm-1, JFe-Mn = -20.12 cm-1).


Subject(s)
Acetates/chemistry , Coordination Complexes/chemistry , Heterocyclic Compounds/chemistry , Manganese/chemistry , Valerates/chemistry , Adsorption , Coordination Complexes/chemical synthesis , Crystallography, X-Ray , Electron Spin Resonance Spectroscopy , Magnetic Phenomena , Molecular Conformation , Temperature , Thermogravimetry , Valerates/chemical synthesis , X-Ray Diffraction
3.
Carbohydr Polym ; 245: 116549, 2020 Oct 01.
Article in English | MEDLINE | ID: mdl-32718641

ABSTRACT

Herein, this study extracted nanocrystalline cellulose (NC) and silica (SiO2) from raw oil palm leaves (OPL), and employed as nanofillers in polyethersulfone (PES) to produce NC-SiO2-PES as support to immobilize Candida rugosa lipase (CRL) (NC-SiO2-PES/CRL). XRD, TGA-DTG and FTIR-ATR data affirmed that NC and SiO2 were isolated from OPL with corresponding crystallinity indices of 68 % and 70 %. A 0.02 cm membrane size with 5% (w/v) of NC-SiO2 without PVP K30 was optimal for membrane fabrication. CRL immobilized on the Glut-AP-NC-SiO2-PES membrane gave a higher conversion of pentyl valerate (PeVa) (91.3 %, p < 0.05) compared to Glut-NC-SiO2-PES (73.9 %) (p < 0.05). Characterization of the NC-SiO2-PES/CRL biocatalyst verified the presence of CRL. Hence, raw OPL is a proven good source of NC and SiO2, as reinforcement nanofillers in PES. The overall findings envisage the promising use of NC-SiO2-PES/CRL to catalyze an expedient and high yield of PeVa, alongside the suitability of NC-SiO2-PES for activating other enzymes.


Subject(s)
Arecaceae/chemistry , Cellulose/chemistry , Lipase/chemistry , Membranes, Artificial , Palm Oil/chemistry , Polymers/chemistry , Sulfones/chemistry , Valerates/chemical synthesis , Biocatalysis , Enzyme Activation , Enzyme Stability , Enzymes, Immobilized/chemistry , Fungal Proteins/chemistry , Saccharomycetales/enzymology , Silicon Dioxide/chemistry
4.
Appl Biochem Biotechnol ; 191(2): 579-604, 2020 Jun.
Article in English | MEDLINE | ID: mdl-31823273

ABSTRACT

Synthesis of (3-aminopropyl) triethoxysilane (APTES)-functionalized graphene oxide (GO) nanosheets, statistical optimization of conditions for immobilization of Bacillus atrophaeus lipase (BaL) on as-synthesized support, and application of the immobilized BaL for esterification of valeric acid were carried out in this investigation. The optimum specific activity of the immobilized BaL (81.60 ± 0.28 U mg-1) was achieved at 3 mg mL-1 of GO-NH2, 50 mM of phosphate buffer, pH 7.0, 60 min sonication time, 100 mM glutaraldehyde, 25 U mL-1 of enzyme, and 8 h immobilization time at 4 °C. The immobilized BaL retained about 90% of its initial activity after 10 days of storage. Moreover, about 70% of the initial activity of the immobilized BaL was retained after 10 cycles of application. The results of esterification studies exhibited that maximum pentyl valerate synthesis using the free BaL (34.5%) and the immobilized BaL (92.7%) occurred in the organic solvent medium (xylene) after 48 h of incubation at 60 °C.


Subject(s)
Amines/chemistry , Bacillus/enzymology , Enzymes, Immobilized/chemistry , Graphite/chemistry , Lipase/metabolism , Nanostructures/chemistry , Valerates/chemical synthesis , Enzyme Stability , Enzymes, Immobilized/metabolism , Esterification , Glutaral , Hydrogen-Ion Concentration , Immobilization , Pentanoic Acids , Solvents
5.
Molecules ; 23(9)2018 Sep 03.
Article in English | MEDLINE | ID: mdl-30177628

ABSTRACT

Ample evidence suggests that H2S is an important biological mediator, produced by endogenous enzymes and microbiota. So far, several techniques including colorimetric methods, electrochemical analysis and sulfide precipitation have been developed for H2S detection. These methods provide sensitive detection, however, they are destructive for tissues and require tedious sequences of preparation steps for the analyzed samples. Here, we report synthesis of a new fluorescent probe for H2S detection, 4-methyl-2-oxo-2H-chromen-7-yl 5-azidopentanoate (1). The design of 1 is based on combination of two strategies for H2S detection, i.e., reduction of an azido group to an amine in the presence of H2S and intramolecular lactamization. Finally, we measured salivary H2S concentration in healthy, 18⁻40-year-old volunteers immediately after obtaining specimens. The newly developed self-immolative coumarin-based fluorescence probe (C15H15N3O4) showed high sensitivity to H2S detection in both sodium phosphate buffer at physiological pH and in saliva. Salivary H2S concentration in healthy volunteers was within a range of 1.641⁻7.124 µM.


Subject(s)
Coumarins/chemistry , Fluorescent Dyes/chemical synthesis , Hydrogen Sulfide/analysis , Saliva/chemistry , Valerates/chemical synthesis , Adult , Biosensing Techniques , Female , Fluorescent Dyes/chemistry , Humans , Male , Molecular Structure , Valerates/chemistry , Young Adult
6.
Int J Biol Macromol ; 115: 680-695, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29698760

ABSTRACT

The chemical-catalyzed transesterification process to produce biofuels i.e. pentyl valerate (PeVa) is environmentally unfriendly, energy-intensive with tedious downstream treatment. The present work reports the use of Rhizomucor miehei lipase (RML) crosslinked onto magnetic chitosan/chitin nanoparticles (RML-CS/CH/MNPs). The approach used to immobilize RML onto the CS/CH/MNPs yielded RML-CS/CH/MNPs with an immobilized protein loading and specific activity of 7.6 mg/g and 5.0 U·g-1, respectively. This was confirmed by assessing data of field emission scanning electron microscopy, X-ray diffraction, thermal gravimetric analysis and Fourier transform infrared spectroscopy. A three-level-four-factor Box-Behnken design (incubation time, temperature, substrate molar ratio, and enzyme loading) was used to optimize the RML-CS/CH/MNP-catalyzed esterification synthesis of PeVa. Under optimum condition, the maximum yield of PeVa (97.8%) can be achieved in 5 h at 50 °C using molar ratio valeric acid:pentanol (1:2) and an enzyme load of 2 mg/mL. Consequently, operational stability experiments showed that the protocol adopted to prepare the CS/CH/MNP nanoparticles had increased the durability of RML. The RML-CS/CH/MNP could catalyze up to eight successive esterification cycles to produce PeVa. The study also demonstrated the functionality of CS/CH/MNP nanoparticles as an eco-friendly support matrix for improving enzymatic activity and operational stability of RML to produce PeVa.


Subject(s)
Chitin/chemistry , Chitosan/chemistry , Lipase/chemistry , Lipase/metabolism , Magnetite Nanoparticles/chemistry , Rhizomucor/enzymology , Valerates/chemical synthesis , Chemistry Techniques, Synthetic , Enzyme Stability , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Temperature
7.
Acta Chim Slov ; 62(3): 689-99, 2015.
Article in English | MEDLINE | ID: mdl-26454604

ABSTRACT

Three novel N-(α-bromoacyl)-α-amino esters: methyl 2-(2-bromo-3-methylbutanamido)pentanoate (1), methyl 2-(2-bromo-3-methylbutanamido)-2-phenylacetate (2) and methyl 2-(2-bromo-3-methylbutanamido)-3-phenylpropanoate (3) were synthesized. Single crystal X-ray diffraction data are reported for compounds 1 and 2. The cytotoxicity, antiinflammatory and antibacterial activity of compounds 1-3 were investigated. Additionally, the physico-chemical properties of studied compounds were calculated and an in silico toxicological study of compounds 1-3 was performed. The low level of cytotoxicity and absence of antibacterial and anti-inflammatory activity of 1-3 in tested concentrations might be a beneficial prerequisite for their incorporation in prodrugs.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/pharmacology , Anti-Inflammatory Agents, Non-Steroidal/chemical synthesis , Anti-Inflammatory Agents, Non-Steroidal/pharmacology , Valerates/chemical synthesis , Valerates/pharmacology , Animals , Anti-Bacterial Agents/chemistry , Anti-Inflammatory Agents, Non-Steroidal/chemistry , Bacteria/drug effects , Chemical Phenomena , Chemistry Techniques, Synthetic , Crystallography, X-Ray , Esters , HeLa Cells , Humans , Mice , Structure-Activity Relationship , Valerates/chemistry
8.
Biomed Res Int ; 2014: 353845, 2014.
Article in English | MEDLINE | ID: mdl-25093166

ABSTRACT

Pentyl valerate was synthesized biocatalytically using Candida rugosa lipase (CRL) immobilized in microemulsion based organogels (MBGs). The optimum conditions were found to be pH 7.0, temperature of 37 °C, ratio of concentration of water to surfactant (Wo) of 60, and the surfactant sodium bis-2-(ethylhexyl)sulfosuccinate (AOT) for MBG preparation. Although kinetic studies revealed that the enzyme in free form had high affinity towards substrates (K(m) = 23.2 mM for pentanol and 76.92 mM for valeric acid) whereas, after immobilization, the K(m) values increased considerably (74.07 mM for pentanol and 83.3 mM for valeric acid) resulting in a slower reaction rate, the maximum conversion was much higher in case of immobilized enzyme (~99%) as compared to free enzyme (~19%). Simultaneous effects of important parameters were studied using response surface methodology (RSM) conjugated with Box-Behnken design (BBD) with five variables (process parameters), namely, enzyme concentration, initial water content (Wo), solvent used for MBG preparation, substrate ratio and time, and response as the final product formation, that is, pentyl valerate (%). The MBGs were reused for 10 consecutive cycles for ester synthesis. Efficacy of AOT/isooctane as dehydrating agent for extracting excess water from MBGs was found to exert a positive effect on the esterification reaction.


Subject(s)
Candida/enzymology , Enzymes, Immobilized/chemistry , Lipase/chemistry , Valerates/chemical synthesis , Emulsions/chemistry , Esterification , Esters/chemical synthesis , Esters/chemistry , Gels/chemical synthesis , Gels/chemistry , Kinetics , Valerates/chemistry , Valerates/therapeutic use , Water/chemistry
9.
J Nanosci Nanotechnol ; 11(7): 5702-10, 2011 Jul.
Article in English | MEDLINE | ID: mdl-22121594

ABSTRACT

Despite the recent research interest in the field of nanoparticles delivery system, their structure modification and transport behavior of various hydrophobic drugs is poorly developed. In this article the synthesis of novel amphiphilic diblock copolymer poly([R]-3-hydroxyvalerate)-block-monomethoxy poly(ethylene glycol) (PHV-block-mPEG) was undertaken by modifying the structure of biodegradable and hydrophobic poly([R]-3-hydroxyvalerate) (PHV) with hydrophilic monomethoxy poly(ethylene glycol) (mPEG). The chemical combination of the two blocks was carried out in the melt using bis(2-ethylhexanoate) tin as transesterification catalyst. The synthesized product was characterized by gel permeation chromatography (GPC), 1H nuclear magnetic resonance (NMR) and differential scanning calorimetry (DSC) analysis. The block copolymer self-assembled into amphiphilic nanoparticles with a core of hydrophobic PHV and a shell of hydrophilic mPEG in aqueous solution. Characterization of the nanoparticles showed the formation of discrete, spherically shaped nanoparticles with mean particle size of 200 +/- 1 nm and zeta potential of -14 +/- 1 mV. A hydrophobic drug thymoquinone was efficiently incorporated into the core hydrophobic domain of the nanoparticles and its release kinetics was studied in vitro. The amphiphilic PEGylated nanoparticles showed biocompatibility when checked in neuronal hippocampal cells of prenatal rat. Our results suggest that the amphiphilic nanoparticles with core-shell structures are potentially useful to develop novel drug carriers.


Subject(s)
Drug Delivery Systems , Nanoparticles/chemistry , Polyesters/chemistry , Polyethylene Glycols/chemistry , Valerates/chemistry , Analysis of Variance , Animals , Benzoquinones/pharmacokinetics , Calorimetry, Differential Scanning , Cell Survival/drug effects , Cells, Cultured , Chromatography, Gel , Female , Hippocampus/drug effects , Hydrophobic and Hydrophilic Interactions , Kinetics , Microscopy, Atomic Force , Neurons/drug effects , Nuclear Magnetic Resonance, Biomolecular , Polyesters/chemical synthesis , Polyesters/pharmacology , Polyethylene Glycols/chemical synthesis , Polyethylene Glycols/pharmacology , Rats , Rats, Sprague-Dawley , Valerates/chemical synthesis , Valerates/pharmacology
10.
J Microbiol Biotechnol ; 18(4): 735-41, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18467869

ABSTRACT

In our previous study, a surfactant-coated Candida rugosa lipase immobilized in microemulsion-based organogels was exploited for the synthesis of ethyl isovalerate. In the present study, we are focusing on the effective reuse of lipase immobilized in microemulsion-based organogels (MBGs) in terms of retainment of the catalytic activity. As water is one of the co-products in esterification reactions, the removal of water becomes a priority to allow the reaction to work in the forward direction and to prevent back hydrolysis. Taking this fact into consideration, the lipase-containing microemulsion-based organogels were given pretreatment and/or several intermittent treatments with dry reverse micellar solution of AOT in organic solvent during repeated cycles of ester synthesis. The pretreated MBGs with dry reverse micellar solution exhibited lower water content and higher initial rates of esterification in comparison with untreated freshly prepared MBGs. The esterification efficiency of untreated MBGs started decreasing after 5 cycles of reuse and was almost completely lost by the end of the 8th cycle. In contrast, pretreated MBGs exhibited a gradual decrease in esterification efficiency after 5 cycles and retained about 80% of the initial activity at the end of the 8th cycle. The intermittent treatment of MBGs after every 3 cycles resulted in enhanced reusability of immobilized lipase for up to 9 cycles without significant loss in esterification activity, after which it resulted in a slow decrease in activity with about 27% lower activity at the end of the 12th cycle. Furthermore, the treatment conditions such as concentration of AOT in liquid dessicant and time of treatment were optimized with respect to our system. The granulated MBGs proved to be better in terms of initial esterification rates (1.2- fold) as compared with the pelleted MBGs.


Subject(s)
Candida/enzymology , Enzymes, Immobilized/chemistry , Fungal Proteins/chemistry , Gelatin , Lipase/chemistry , Valerates/chemical synthesis , Emulsions , Enzymes, Immobilized/metabolism , Esterification , Fungal Proteins/metabolism , Gelatin/analysis , Lipase/metabolism , Surface-Active Agents/analysis , Valerates/metabolism
11.
Chem Phys Lipids ; 127(1): 35-46, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14706739

ABSTRACT

A 23-26-carbon chain length range of omega-19 (1'R,2'S) cyclopropane fatty acids, related to mycobacterial mycolic acids, has been prepared. The key cyclopropyl intermediate, (1'R,2'S)-(Z)-1-formyl-2-octadecylcyclopropane, underwent Wittig chemistry with various reagents to provide vinylic precursors, which were selectively reduced to the corresponding saturated omega-19 cyclopropane fatty acids or esters. The 24-carbon omega-19 cyclopropane ester was made by chain elongation of the 23-carbon ester. Saturated and unsaturated chiral cyclopropane acids and esters were assayed, using wall extracts of Mycobacterium smegmatis; the incorporation of 14C-acetate was used to measure inhibition or stimulation of mycolic acid synthesis. Minor inhibition (2-3%) was shown by the 23- and 24-carbon saturated esters; all the other compounds were stimulants. The most effective (38-55%) stimulators of mycolate synthesis were the unsaturated esters with 23- and 26-carbons and the saturated and unsaturated 25-carbon acids.


Subject(s)
Cyclopropanes/chemical synthesis , Fatty Acids/chemical synthesis , Mycobacterium smegmatis/chemistry , Mycolic Acids/chemical synthesis , Valerates/chemical synthesis , Carbon Isotopes/chemistry , Cell Wall/chemistry , Chromatography, Thin Layer , Cyclopropanes/chemistry , Esters/chemistry , Fatty Acids/chemistry , Mycolic Acids/chemistry , Valerates/chemistry
12.
Prikl Biokhim Mikrobiol ; 39(3): 278-83, 2003.
Article in English | MEDLINE | ID: mdl-12754824

ABSTRACT

Immobilized lipase from Rhizomucor miehei (Lipozyme IM-20) was used to catalyze the esterification reaction between isovaleric acid and ethanol to synthesize ethyl isovalerate in n-hexane. Response surface methodology based on five-level four-variable central composite rotatable design was employed to optimize four important reaction variables such as enzyme/substrate E/S ratio, substrate concentration, incubation time, and temperature affecting the synthesis of ethyl isovalerate. The optimum conditions predicted for achieving maximum ester yield (500 mM) are as follows: E/S ratio, 48.41 g/mol; substrate concentration, 1 M; reaction time, 60 h; temperature, 60 degrees C. The predicted value matched well with experimentally obtained value of 487 mM.


Subject(s)
Lipase/chemistry , Rhizomucor/chemistry , Valerates/chemical synthesis , Analysis of Variance , Catalysis , Enzymes, Immobilized , Esterification , Ethanol/chemistry , Hemiterpenes , Hexanes , Mathematical Computing , Pentanoic Acids/chemistry , Substrate Specificity , Temperature , Time Factors
13.
J Am Chem Soc ; 124(51): 15239-48, 2002 Dec 25.
Article in English | MEDLINE | ID: mdl-12487599

ABSTRACT

Polymerization of beta-butyrolactone (BBL) and beta-valerolactone (BVL) using the zinc alkoxide initiator (BDI-1)ZnO(i)()Pr [(BDI-1) = 2-((2,6-diisopropylphenyl)amido)-4-((2,6-diisopropylphenyl)imino)-2-pentene] proceeds very rapidly under mild conditions to produce poly(3-hydroxybutyrate) (PHB) and poly(3-hydroxyvalerate) (PHV), respectively. For the monomer-to-initiator ratio 200:1, PHB number-average molecular weights (M(n)) are proportional to conversion throughout the reaction and polydispersity indices (PDIs) are narrow, consistent with a living polymerization. Higher monomer-to-initiator ratios can be used to achieve high molecular weight PHB (M(n) > 100 000). End-group analysis verifies that the polymerization of BBL follows a coordination-insertion mechanism, where complexes of the form (BDI-1)ZnOCH(Me)CH(2)CO(2)R are the active species. Variable temperature NMR experiments show that (BDI-1)ZnO(i)()Pr is monomeric in benzene-d(6) solution. In contrast, (BDI-2)ZnO(i)()Pr [(BDI-2) = 2-((2,6-diethylphenyl)amido)-4-((2,6-diethylphenyl)imino)-2-pentene] is a poor initiator at room temperature because it prefers to form a bis-mu-isopropoxide dimer in solution. According to kinetic studies, propagation by (BDI-1)ZnO(i)()Pr is first order in both monomer as well as (BDI-1)ZnO(i)()Pr concentration. These results lead us to propose a monometallic active species. Several results suggest that elimination side reactions are slowly catalyzed by zinc alkoxides, leading to degradation of the polymer.


Subject(s)
4-Butyrolactone/analogs & derivatives , 4-Butyrolactone/chemistry , Hydroxybutyrates/chemical synthesis , Lactones/chemistry , Organometallic Compounds/chemistry , Polyesters/chemical synthesis , Valerates/chemical synthesis , Zinc/chemistry , Catalysis , Crystallography, X-Ray , Kinetics , Magnetic Resonance Spectroscopy , Solutions , Stereoisomerism
14.
Se Pu ; 20(1): 34-6, 2002 Jan.
Article in Chinese | MEDLINE | ID: mdl-12541614

ABSTRACT

A new cyclodextrin (CD) derivative, 2,6-di-O-benzyl-3-O-valeryl-beta-CD, was synthesized and characterized by 1H NMR and IR. Using the beta-CD derivative as chiral stationary phase of capillary gas chromatography, one chiral column was prepared. On this column, the enantiomeric excesses (e.e.) of 1-(2,4-dichlorophenyl) ethanol obtained by asymmetric catalytic hydrogenation of 2,4-dichloroacetophone and trans-3-propyloxiranemethanol synthesized by Sharpless epoxidation of trans-2-hexenol were determined and the catalytic reactions were evaluated. The results are satisfactory.


Subject(s)
Acetophenones/isolation & purification , Chromatography, Gas/instrumentation , Cyclodextrins/chemical synthesis , Valerates/chemical synthesis , beta-Cyclodextrins , Acetophenones/analysis , Chromatography, Gas/methods , Cyclodextrins/chemistry , Stereoisomerism
15.
Org Lett ; 3(18): 2867-9, 2001 Sep 06.
Article in English | MEDLINE | ID: mdl-11529777

ABSTRACT

[structure: see text]. Several conformationally rigid analogues of the methylvalerate subunit contained within the linker domain of the antitumor antibiotic bleomycin have been prepared. These compounds have been protected in a fashion suitable for the solid-phase synthesis of bleomycin. Bleomycin congeners containing these analogues should facilitate a more detailed understanding of the nature of the conformational bend that the methylvalerate moiety is thought to impart to the natural product.


Subject(s)
Bleomycin/analogs & derivatives , Antibiotics, Antineoplastic/chemical synthesis , Antibiotics, Antineoplastic/chemistry , Bleomycin/chemical synthesis , Bleomycin/chemistry , Molecular Conformation , Valerates/chemical synthesis , Valerates/chemistry
16.
Carbohydr Res ; 332(4): 405-14, 2001 Jun 15.
Article in English | MEDLINE | ID: mdl-11438097

ABSTRACT

3-O-Benzyl-alpha-D-xylopyranose 1,2,4-orthopivalate (1) was newly synthesized and polymerized under cationic polymerization reaction conditions in order to synthesize stereoregular (1-->4)-beta-D-xylopyranan. Although the polymerization of orthopivalate 1 was carried out under various reaction conditions, a non-stereoregular polymer, but mainly consisting of (1-->4)-beta-xylopyranose units, was obtained. Comparing these results with those of glucose 1,2,4-orthopivalates, it was revealed that not only the substituents in the C-2 and C-3 positions, but also the CH(2)OR group in glucose 1,2,4-orthopivalate, largely contribute to (1-->4)-beta-glucosidic bond formation by the ring-opening polymerization.


Subject(s)
Polysaccharides/chemical synthesis , Valerates/chemical synthesis , Xylose/chemical synthesis , Carbohydrate Conformation , Indicators and Reagents , Magnetic Resonance Spectroscopy , Optical Rotation , Polysaccharides/chemistry , Valerates/chemistry , Xylose/analogs & derivatives , Xylose/chemistry
17.
J Med Chem ; 43(5): 921-44, 2000 Mar 09.
Article in English | MEDLINE | ID: mdl-10715158

ABSTRACT

The design of potent protein kinase C (PK-C) ligands with low nanomolar binding affinities was accomplished by the combined use of pharmacophore- and receptor-guided approaches based on the structure of the physiological enzyme activator, diacylglycerol (DAG). Earlier use of the former approach, which was based on the structural equivalence of DAG and phorbol ester pharmacophores, identified a fixed template for the construction of a semirigid "recognition domain" that contained the three principal pharmacophores of DAG constrained into a lactone ring (DAG-lactones). In the present work, the pharmacophore-guided approach was refined to a higher level based on the X-ray structure of the C1b domain of PK-Cdelta complexed with phorbol-13-O-acetate. A systematic search that involved modifying the DAG-lactone template with a combination of linear or branched acyl and alpha-alkylidene chains, which functioned as variable hydrophobic "affinity domains", helped identify compounds that optimized hydrophobic contacts with a group of conserved hydrophobic amino acids located on the top half of the C1 domain where the phorbol binds. The hydrophilic/hydrophobic balance of the molecules was estimated by the octanol/water partition coefficients (log P) calculated according to a fragment-based approach. The presence of branched alpha-alkylidene or acyl chains was of critical importance to reach low nanomolar binding affinities for PK-C. These branched chains appear to facilitate important van der Waals contacts with hydrophobic segments of the protein and help promote the activation of PK-C through critical membrane interactions. Molecular modeling of these DAG-lactones into an empty C1b domain using the program AutoDock 2.4 suggests the existence of competing binding modes (sn-1 and sn-2) depending on which carbonyl is directly involved in binding to the protein. Inhibition of epidermal growth factor (EGF) binding, an indirect PK-C mediated response, was realized with some DAG-lactones at a dose 10-fold higher than with the standard phorbol-12, 13-dibutyrate (PDBU). Through the National Cancer Institute (NCI) 60-cell line in vitro screen, DAG-lactone 31 was identified as a very selective and potent antitumor agent. The NCI's computerized, pattern-recognition program COMPARE, which analyzes the degree of similarity of mean-graph profiles produced by the screen, corroborated our principles of drug design by matching the profile of compound 31 with that of the non-tumor-promoting antitumor phorbol ester, prostratin. The structural simplicity and the degree of potency achieved with some of the DAG-lactones described here should dispel the myth that chemical complexity and pharmacological activity go hand in hand. Even as a racemate, DAG-lactone 31 showed low namomolar binding affinity for PK-C and displayed selective antitumor activity at equivalent nanomolar levels. Our present approach should facilitate the generation of multiple libraries of structurally similar DAG-lactones to help exploit molecular diversity for PK-C and other high-affinity receptors for DAG and the phorbol esters. The success of this work suggests that substantially simpler, high-affinity structures could be identified to function as surrogates of other complex natural products.


Subject(s)
4-Butyrolactone/analogs & derivatives , Antineoplastic Agents/chemistry , Isoenzymes/metabolism , Protein Kinase C/metabolism , Valerates/chemistry , 4-Butyrolactone/chemical synthesis , 4-Butyrolactone/chemistry , 4-Butyrolactone/metabolism , 4-Butyrolactone/pharmacology , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/metabolism , Antineoplastic Agents/pharmacology , Binding, Competitive , Crystallography, X-Ray , Drug Design , Drug Screening Assays, Antitumor , Enzyme Activation , Epidermal Growth Factor/antagonists & inhibitors , Epidermal Growth Factor/metabolism , Isoenzymes/chemistry , Ligands , Models, Molecular , Protein Kinase C/chemistry , Protein Kinase C-alpha , Stereoisomerism , Structure-Activity Relationship , Tumor Cells, Cultured , Valerates/chemical synthesis , Valerates/metabolism , Valerates/pharmacology
18.
Mol Divers ; 4(3): 155-63, 1998.
Article in English | MEDLINE | ID: mdl-10729900

ABSTRACT

The 5-(4-formyl-3,5-dimethoxyphenoxy)valeric acid (Barany) linker and its monomethoxy analog were applied to the Multipin method of solid phase synthesis. A comparative assessment of reductive amination and cleavage of these linkers under conditions of multiple synthesis indicated that both were applicable to a broad range of primary amines including aniline and 4-nitroaniline. Apart from the greater lability of the dimethoxy version under TFA cleavage, there was no observable advantage of one linker over the other within the described experiment.


Subject(s)
Benzaldehydes/chemical synthesis , Benzaldehydes/metabolism , Pentanoic Acids/chemistry , Peptides/chemical synthesis , Valerates/chemical synthesis , Valerates/metabolism , Amination , Chromatography, High Pressure Liquid , Peptides/isolation & purification
19.
Int J Biol Macromol ; 19(1): 29-34, 1996 Jul.
Article in English | MEDLINE | ID: mdl-8782716

ABSTRACT

When Pseudomonas oleovorans was grown on a mixture of 5-phenylvaleric acid, PVA, and nonanoic acid, NA, the reserve polyester produced included both a homopolymer and a copolymer. The homopolymer poly-3-hydroxy-5-phenylvalerate, PHPV, contained only 3-hydroxy-5-phenylvalerate units, while the copolymer contained the same long chain 3-hydroxyalkanoates as those present in the copolymer poly-3-hydroxynonanoate, PHN, which is produced from acid alone. The intracellular location of each of these polymers was determined by selective staining of the inclusion body granules with ruthenium tetraoxide and examination by transmission electron microscopy showed that both types of polyesters occurred in the same granule. PHN was present in the center of the granule, while PHPV accumulated around the PHN in the inclusion body. The proteins associated with the inclusion bodies were separated using sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). In all cases, two different polymerase enzymes of molecular weight 59 and 55 KDa were present, indicating that the same polymerase enzyme system was responsible for the production of both PHN and PHPV. Attempts were made to produce a random copolymer containing both alkyl and phenylalkyl repeat units by varying the growth conditions, but a mixture of PHN and PHPV was always produced instead.


Subject(s)
Inclusion Bodies/metabolism , Polyesters/metabolism , Pseudomonas/metabolism , Valerates/chemical synthesis , Electrophoresis, Polyacrylamide Gel , Fatty Acids/metabolism , Inclusion Bodies/ultrastructure , Microscopy, Electron
20.
Bioorg Med Chem ; 4(3): 423-8, 1996 Mar.
Article in English | MEDLINE | ID: mdl-8733622

ABSTRACT

The synthesis of the polypropionate-derived pheromones sitophilate (1) and sitophilure (2) are described using an asymmetric aldol condensation as the key step to adduct 6; compound 6 was smoothly converted to the antipodes of each pheromone. This procedure can be expanded to more complicated structures with the same type of syn configuration such as stegobinone (3) and serricornin (4).


Subject(s)
Ketones/chemical synthesis , Pheromones/chemical synthesis , Propionates/chemistry , Valerates/chemical synthesis , Magnetic Resonance Spectroscopy , Pyrones/chemical synthesis , Spectrophotometry, Infrared , Stereoisomerism
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