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1.
Mol Ther ; 32(7): 2264-2285, 2024 Jul 03.
Article in English | MEDLINE | ID: mdl-38702887

ABSTRACT

Overexpression of vesicular stomatitis virus G protein (VSV-G) elevates the secretion of EVs known as gectosomes, which contain VSV-G. Such vesicles can be engineered to deliver therapeutic macromolecules. We investigated viral glycoproteins from several viruses for their potential in gectosome production and intracellular cargo delivery. Expression of the viral glycoprotein (viral glycoprotein from the Chandipura virus [CNV-G]) from the human neurotropic pathogen Chandipura virus in 293T cells significantly augments the production of CNV-G-containing gectosomes. In comparison with VSV-G gectosomes, CNV-G gectosomes exhibit heightened selectivity toward specific cell types, including primary cells and tumor cell lines. Consistent with the differential tropism between CNV-G and VSV-G gectosomes, cellular entry of CNV-G gectosome is independent of the Low-density lipoprotein receptor, which is essential for VSV-G entry, and shows varying sensitivity to pharmacological modulators. CNV-G gectosomes efficiently deliver diverse intracellular cargos for genomic modification or responses to stimuli in vitro and in the brain of mice in vivo utilizing a split GFP and chemical-induced dimerization system. Pharmacokinetics and biodistribution analyses support CNV-G gectosomes as a versatile platform for delivering macromolecular therapeutics intracellularly.


Subject(s)
Vesiculovirus , Animals , Humans , Mice , Vesiculovirus/genetics , Vesiculovirus/metabolism , Extracellular Vesicles/metabolism , Viral Envelope Proteins/metabolism , Viral Envelope Proteins/genetics , Glycoproteins/metabolism , Glycoproteins/genetics , HEK293 Cells , Viral Proteins/metabolism , Viral Proteins/genetics , Membrane Glycoproteins/metabolism , Membrane Glycoproteins/genetics , Drug Delivery Systems/methods , Cell Line, Tumor
2.
J Virol ; 97(8): e0024623, 2023 08 31.
Article in English | MEDLINE | ID: mdl-37578231

ABSTRACT

The phospho- (P) protein, the co-factor of the RNA polymerase large (L) protein, of vesicular stomatitis virus (VSV, a prototype of nonsegmented negative-strand RNA viruses) plays pivotal roles in transcription and replication. However, the precise mechanism underlying the transcriptional transactivation by the P protein has remained elusive. Here, using an in vitro transcription system and a series of deletion mutants of the P protein, we mapped a region encompassing residues 51-104 as a transactivation domain (TAD) that is critical for terminal de novo initiation, the initial step of synthesis of the leader RNA and anti-genome/genome, with the L protein. Site-directed mutagenesis revealed that conserved amino acid residues in three discontinuous L-binding sites within the TAD are essential for the transactivation activity of the P protein or important for maintaining its full activity. Importantly, relative inhibitory effects of TAD point mutations on synthesis of the full-length leader RNA and mRNAs from the 3'-terminal leader region and internal genes, respectively, of the genome were similar to those on terminal de novo initiation. Furthermore, any of the examined TAD mutations did not alter the gradient pattern of mRNAs synthesized from internal genes, nor did they induce the production of readthrough transcripts. These results suggest that these TAD mutations impact mainly terminal de novo initiation but rarely other steps (e.g., elongation, termination, internal initiation) of single-entry stop-start transcription. Consistently, the mutations of the essential or important amino acid residues within the P TAD were lethal or deleterious to VSV replication in host cells. IMPORTANCE RNA-dependent RNA polymerase L proteins of nonsegmented negative-strand RNA viruses belonging to the Mononegavirales order require their cognate co-factor P proteins or their counterparts for genome transcription and replication. However, exact roles of these co-factor proteins in modulating functions of L proteins during transcription and replication remain unknown. In this study, we revealed that three discrete L-binding motifs within a transactivation domain of the P protein of vesicular stomatitis virus, a prototypic nonsegmented negative-strand RNA virus, are required for terminal de novo initiation mediated by the L protein, which is the first step of synthesis of the leader RNA as well as genome/anti-genome.


Subject(s)
Vesicular Stomatitis , Animals , Vesicular Stomatitis/genetics , Transcriptional Activation , RNA, Viral/genetics , RNA, Viral/metabolism , Vesiculovirus/metabolism , Vesicular stomatitis Indiana virus/genetics , Vesicular stomatitis Indiana virus/metabolism , RNA, Messenger/genetics , Amino Acids/genetics , Transcription, Genetic , Virus Replication/genetics
3.
J Virol ; 97(6): e0037223, 2023 06 29.
Article in English | MEDLINE | ID: mdl-37199666

ABSTRACT

Viral oncolytic immunotherapy is a nascent field that is developing tools to direct the immune system to find and eliminate cancer cells. Safety is improved by using cancer-targeted viruses that infect or grow poorly on normal cells. The recent discovery of the low-density lipoprotein (LDL) receptor as the major vesicular stomatitis virus (VSV) binding site allowed for the creation of a Her2/neu-targeted replicating recombinant VSV (rrVSV-G) by eliminating the LDL receptor binding site in the VSV-G glycoprotein (gp) and adding a sequence coding for a single chain antibody (SCA) to the Her2/neu receptor. The virus was adapted by serial passage on Her2/neu-expressing cancer cells resulting in a virus that yielded a 15- to 25-fold higher titer following in vitro infection of Her2/neu+-expressing cell lines than that of Her2/neu-negative cells (~1 × 108/mL versus 4 × 106 to 8 × 106/mL). An essential mutation resulting in a higher titer virus was a threonine-to-arginine change that produced an N-glycosylation site in the SCA. Infection of Her2/neu+ subcutaneous tumors yielded >10-fold more virus on days 1 and 2 than Her2/neu- tumors, and virus production continued for 5 days in Her2/neu+ tumors compared with 3 days that of 3 days in Her2/neu- tumors. rrVSV-G cured 70% of large 5-day peritoneal tumors compared with a 10% cure by a previously targeted rrVSV with a modified Sindbis gp. rrVSV-G also cured 33% of very large 7-day tumors. rrVSV-G is a new targeted oncolytic virus that has potent antitumor capabilities and allows for heterologous combination with other targeted oncolytic viruses. IMPORTANCE A new form of vesicular stomatitis virus (VSV) was created that specifically targets and destroys cancer cells that express the Her2/neu receptor. This receptor is commonly found in human breast cancer and is associated with a poor prognosis. In laboratory tests using mouse models, the virus was highly effective at eliminating implanted tumors and creating a strong immune response against cancer. VSV has many advantages as a cancer treatment, including high levels of safety and efficacy and the ability to be combined with other oncolytic viruses to enhance treatment results or to create an effective cancer vaccine. This new virus can also be easily modified to target other cancer cell surface molecules and to add immune-modifying genes. Overall, this new VSV is a promising candidate for further development as an immune-based cancer therapy.


Subject(s)
Breast Neoplasms , Glycoproteins , Oncolytic Virotherapy , Oncolytic Viruses , Vesiculovirus , Animals , Female , Humans , Mice , Breast Neoplasms/therapy , Cell Line, Tumor , Glycoproteins/genetics , Glycoproteins/metabolism , Oncolytic Virotherapy/methods , Oncolytic Viruses/genetics , Oncolytic Viruses/metabolism , Receptor, ErbB-2/genetics , Receptor, ErbB-2/metabolism , Vesiculovirus/genetics , Vesiculovirus/metabolism , Virus Replication , Survival Analysis
4.
Virulence ; 14(1): 2196847, 2023 12.
Article in English | MEDLINE | ID: mdl-37005771

ABSTRACT

Heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1) plays an important role in regulating the replication of many viruses. However, it remains elusive whether and how hnRNPA1 regulates fish virus replication. In this study, the effects of twelve hnRNPs on the replication of snakehead vesiculovirus (SHVV) were screened. Three hnRNPs, one of which was hnRNPA1, were identified as anti-SHVV factors. Further verification showed that knockdown of hnRNPA1 promoted, while overexpression of hnRNPA1 inhibited, SHVV replication. SHVV infection reduced the expression level of hnRNPA1 and induced the nucleocytoplasmic shuttling of hnRNPA1. Besides, we found that hnRNPA1 interacted with the viral phosphoprotein (P) via its glycine-rich domain, but not with the viral nucleoprotein (N) or large protein (L). The hnRNPA1-P interaction competitively disrupted the viral P-N interaction. Moreover, we found that overexpression of hnRNPA1 enhanced the polyubiquitination of the P protein and degraded it through proteasomal and lysosomal pathways. This study will help understanding the function of hnRNPA1 in the replication of single-stranded negative-sense RNA viruses and providing a novel antiviral target against fish rhabdoviruses.


Subject(s)
Nucleoproteins , Rhabdoviridae Infections , Animals , Heterogeneous Nuclear Ribonucleoprotein A1/genetics , Nucleoproteins/metabolism , Rhabdoviridae Infections/metabolism , Fishes , Vesiculovirus/genetics , Vesiculovirus/metabolism , Phosphoproteins/metabolism , Virus Replication
5.
Sci Rep ; 11(1): 13253, 2021 06 24.
Article in English | MEDLINE | ID: mdl-34168211

ABSTRACT

Chandipura virus (CHPV, a member of the Rhabdoviridae family) is an emerging pathogen that causes rapidly progressing influenza-like illness and acute encephalitis often leading to coma and death of the human host. Given several CHPV outbreaks in Indian sub-continent, recurring sporadic cases, neurological manifestation, and high mortality rate of this infection, CHPV is gaining global attention. The 'dark proteome' includes the whole proteome with special emphasis on intrinsically disordered proteins (IDP) and IDP regions (IDPR), which are proteins or protein regions that lack unique (or ordered) three-dimensional structures within the cellular milieu. These proteins/regions, however, play a number of vital roles in various biological processes, such as cell cycle regulation, control of signaling pathways, etc. and, therefore, are implicated in many human diseases. IDPs and IPPRs are also abundantly found in many viral proteins enabling their multifunctional roles in the viral life cycles and their capability to highjack various host systems. The unknown abundance of IDP and IDPR in CHPV, therefore, prompted us to analyze the dark proteome of this virus. Our analysis revealed a varying degree of disorder in all five CHPV proteins, with the maximum level of intrinsic disorder propensity being found in Phosphoprotein (P). We have also shown the flexibility of P protein using extensive molecular dynamics simulations up to 500 ns (ns). Furthermore, our analysis also showed the abundant presence of the disorder-based binding regions (also known as molecular recognition features, MoRFs) in CHPV proteins. The identification of IDPs/IDPRs in CHPV proteins suggests that their disordered regions may function as potential interacting domains and may also serve as novel targets for disorder-based drug designs.


Subject(s)
Intrinsically Disordered Proteins/metabolism , Rhabdoviridae Infections/metabolism , Vesiculovirus/metabolism , DNA-Directed RNA Polymerases/metabolism , Genome, Viral/genetics , Humans , Nucleoproteins/genetics , Nucleoproteins/metabolism , Phosphoproteins/metabolism , Proteome , Rhabdoviridae Infections/virology , Sequence Alignment , Vesiculovirus/genetics , Viral Proteins/genetics , Viral Proteins/metabolism
6.
J Virol ; 95(16): e0059421, 2021 07 26.
Article in English | MEDLINE | ID: mdl-34037421

ABSTRACT

Snakehead vesiculovirus (SHVV), a kind of fish rhabdovirus isolated from diseased hybrid snakehead fish, has caused great economic losses in snakehead fish culture in China. The large (L) protein, together with its cofactor phosphoprotein (P), forms a P/L polymerase complex and catalyzes the transcription and replication of viral genomic RNA. In this study, the cellular heat shock protein 90 (Hsp90) was identified as an interacting partner of SHVV L protein. Hsp90 activity was required for the stability of SHVV L because Hsp90 dysfunction caused by using its inhibitor destabilized SHVV L and thereby suppressed SHVV replication via reducing viral RNA synthesis. SHVV L expressed alone was detected mainly in the insoluble fraction, and the insoluble L was degraded by Hsp90 dysfunction through the proteasomal pathway, while the presence of SHVV P promoted the solubility of SHVV L and the soluble L was degraded by Hsp90 dysfunction through the autophagy pathway. Collectively, our data suggest that Hsp90 contributes to the maturation of SHVV L and ensures the effective replication of SHVV, which exhibits an important anti-SHVV target. This study will help us to understand the role of Hsp90 in stabilizing the L protein and regulating the replication of negative-stranded RNA viruses. IMPORTANCE It has long been proposed that cellular proteins are involved in viral RNA synthesis via interacting with the viral polymerase protein. This study focused on identifying cellular proteins interacting with the SHVV L protein, studying the effects of their interactions on SHVV replication, and revealing the underlying mechanisms. We identified Hsp90 as an interacting partner of SHVV L and found that Hsp90 activity was required for SHVV replication. Hsp90 functioned in maintaining the stability of SHVV L. Inhibition of Hsp90 activity with its inhibitor degraded SHVV L through different pathways based on the solubility of SHVV L due to the presence or absence of SHVV P. Our data provide important insights into the role of Hsp90 in SHVV polymerase maturation, which will help us to understand the polymerase function of negative-stranded RNA viruses.


Subject(s)
HSP90 Heat-Shock Proteins/metabolism , RNA-Dependent RNA Polymerase/metabolism , Vesiculovirus/physiology , Viral Proteins/metabolism , Virus Replication , Animals , Cells, Cultured , Fishes , HSP90 Heat-Shock Proteins/antagonists & inhibitors , Phosphoproteins/metabolism , Protein Stability , RNA, Viral/biosynthesis , Rhabdoviridae Infections/veterinary , Rhabdoviridae Infections/virology , Vesiculovirus/metabolism
7.
J Virol ; 95(6)2021 02 24.
Article in English | MEDLINE | ID: mdl-33408176

ABSTRACT

Respiratory syncytial virus (RSV) is a major cause of lower respiratory tract (LRT) infections, with increased severity in high-risk human populations, such as infants, the immunocompromised, and the elderly. Although the virus was identified more than 60 years ago, there is still no licensed vaccine available. Over the years, several vaccine delivery strategies have been evaluated. In this study, we developed two recombinant vesicular stomatitis virus (rVSV) vector-based vaccine candidates expressing the RSV-G (attachment) protein (rVSV-G) or F (fusion) protein (rVSV-F). All vectors were evaluated in the cotton rat animal model for their in vivo immunogenicity and protective efficacy against an RSV-A2 virus challenge. Intranasal (i.n.) delivery of rVSV-G and rVSV-F together completely protected the lower respiratory tract (lungs) at doses as low as 103 PFU. In contrast, doses greater than 106 PFU were required to protect the upper respiratory tract (URT) completely. Reimmunization of RSV-immune cotton rats was most effective with rVSV-F. In immunized animals, overall antibody responses were sufficient for protection, whereas CD4 and CD8 T cells were not necessary. A prime-boost immunization regimen increased both protection and neutralizing antibody titers. Overall, mucosally delivered rVSV-vector-based RSV vaccine candidates induce protective immunity and therefore represent a promising immunization regimen against RSV infection.IMPORTANCE Even after decades of intensive research efforts, a safe and efficacious RSV vaccine remains elusive. Expression of heterologous antigens from rVSV vectors has demonstrated several practical and safety advantages over other virus vector systems and live attenuated vaccines. In this study, we developed safe and efficacious vaccine candidates by expressing the two major immunogenic RSV surface proteins in rVSV vectors and delivering them mucosally in a prime-boost regimen. The main immune parameter responsible for protection was the antibody response. These vaccine candidates induced complete protection of both the upper and lower respiratory tracts.


Subject(s)
Respiratory Syncytial Virus Infections/prevention & control , Respiratory Syncytial Virus Vaccines/administration & dosage , Respiratory Syncytial Virus, Human/immunology , Vesiculovirus/genetics , Viral Envelope Proteins/immunology , Viral Fusion Proteins/immunology , Administration, Mucosal , Animals , Disease Models, Animal , Genetic Vectors , Immunity, Cellular , Immunity, Humoral , Immunization , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Recombinant Proteins/metabolism , Respiratory Syncytial Virus Infections/immunology , Respiratory Syncytial Virus Vaccines/immunology , Respiratory Syncytial Virus, Human/genetics , Respiratory System/immunology , Respiratory System/virology , Sigmodontinae , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/immunology , Vesiculovirus/metabolism , Viral Envelope Proteins/genetics , Viral Envelope Proteins/metabolism , Viral Fusion Proteins/genetics , Viral Fusion Proteins/metabolism
8.
Biomed Pharmacother ; 134: 110932, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33370632

ABSTRACT

Oncolytic viruses have attracted attention as a promising strategy in cancer therapy owing to their ability to selectively infect and kill tumor cells, without affecting healthy cells. They also exert their anti-tumor effects by releasing immunostimulatory molecules from dying cancer cells. Several regulatory mechanisms, such as autophagy, contribute to the anti-tumor properties of oncolytic viruses. Autophagy is a conserved catabolic process in responses to various stresses, such as nutrient deprivation, hypoxia, and infection that produces energy by lysosomal degradation of intracellular contents. Autophagy can support infectivity and replication of the oncolytic virus and enhance their anti-tumor effects via mediating oncolysis, autophagic cell death, and immunogenic cell death. On the other hand, autophagy can reduce the cytotoxicity of oncolytic viruses by providing survival nutrients for tumor cells. In his review, we summarize various types of oncolytic viruses in clinical trials, their mechanism of action, and autophagy machinery. Furthermore, we precisely discuss the interaction between oncolytic viruses and autophagy in cancer therapy and their combinational effects on tumor cells.


Subject(s)
Autophagy , Neoplasms/therapy , Oncolytic Virotherapy/methods , Oncolytic Viruses/metabolism , Adenoviridae/metabolism , Animals , Autophagic Cell Death , Cell Line, Tumor , Clinical Trials as Topic , Humans , Immunogenic Cell Death , Measles virus/metabolism , Mice , Neoplasms/metabolism , Simplexvirus/metabolism , Vesiculovirus/metabolism , Virus Replication
9.
Cytokine ; 138: 155388, 2021 02.
Article in English | MEDLINE | ID: mdl-33271385

ABSTRACT

Chinese tree shrews (Tupaia belangeri chinensis) are increasingly used as an alternative experimental animal to non-human primates in studying viral infections. Guanylate-binding proteins (GBP) belong to interferon (IFN)-inducible GTPases and defend the mammalian cell interior against diverse invasive pathogens. Previously, we identified five tree shrew GBP genes (tGBP1, tGBP2, tGBP4, tGBP5, and tGBP7) and found that tGBP1 showed antiviral activity against vesicular stomatitis virus (VSV) and type 1 herpes simplex virus (HSV-1) infections. Here, we showed that the anti-VSV activity of tGBP1 was independent of its GTPase activity and isoprenylation. In response to VSV infection, instead of regulating IFN expression and autophagy, tGBP1 competed with the VSV nucleocapsid (N) protein in binding to the VSV phosphoprotein (VSV-P), leading to the repression of the primary transcription of the VSV genome. These observations constitute the first report of the potential mechanism underlying the inhibition of VSV by GBP1.


Subject(s)
GTP-Binding Proteins/metabolism , Gene Expression Regulation , Genome, Viral , Phosphoproteins/genetics , Tupaia/genetics , Vesiculovirus/metabolism , Animals , Autophagy , HEK293 Cells , Humans , Interferons/metabolism , Nucleocapsid Proteins/chemistry , Protein Binding , Transcription Factors/genetics , Transcription, Genetic , Up-Regulation , Viral Proteins/chemistry , Virus Replication/drug effects
10.
J Virol ; 94(21)2020 10 14.
Article in English | MEDLINE | ID: mdl-32817219

ABSTRACT

Adeno-associated viruses (AAVs) are dependoparvoviruses that have proven useful for therapeutic gene transfer; however, our understanding of host factors that influence AAV trafficking and transduction is still evolving. Here, we investigated the role of cellular calcium in the AAV infectious pathway. First, we demonstrated a critical role for the host Golgi compartment-resident ATP-powered calcium pump (secretory pathway calcium ATPase 1 [SPCA1]) encoded by the ATP2C1 gene in AAV infection. CRISPR-based knockout (KO) of ATP2C1 decreases transduction by different AAV serotypes. ATP2C1 KO does not appear to inhibit AAV binding, cellular uptake, or nuclear entry; however, capsids within ATP2C1 KO cells demonstrate dispersed and punctate trafficking distinct from the perinuclear, trans-Golgi pattern observed in normal cells. In addition, we observed a defect in the ability of AAV capsids to undergo conformational changes and support efficient vector genome transcription in ATP2C1 KO cells. The calcium chelator BAPTA-AM, which reduces cytosolic calcium, rescues the defective ATP2C1 KO phenotype and AAV transduction in vitro Conversely, the calcium ionophore ionomycin, which disrupts calcium gradients, blocks AAV transduction. Further, we demonstrated that modulating calcium in the murine brain using BAPTA-AM augments AAV gene expression in vivo Taking these data together, we postulate that the maintenance of an intracellular calcium gradient by the calcium ATPase and processing within the Golgi compartment are essential for priming the capsid to support efficient AAV genome transcription.IMPORTANCE Adeno-associated viruses (AAVs) have proven to be effective gene transfer vectors. However, our understanding of how the host cell environment influences AAV transduction is still evolving. In the present study, we investigated the role of ATP2C1, which encodes a membrane calcium transport pump, SPCA1, essential for maintaining cellular calcium homeostasis on AAV transduction. Our results indicate that cellular calcium is essential for efficient intracellular trafficking and conformational changes in the AAV capsid that support efficient genome transcription. Further, we show that pharmacological modulation of cellular calcium levels can potentially be applied to improve the AAV gene transfer efficiency.


Subject(s)
Calcium-Transporting ATPases/genetics , Calcium/metabolism , Dependovirus/genetics , Genetic Vectors/metabolism , Golgi Apparatus/metabolism , Animals , Animals, Newborn , Biological Transport/drug effects , Brain/drug effects , Brain/metabolism , CRISPR-Cas Systems , Calcium-Transporting ATPases/deficiency , Cell Line, Tumor , Chelating Agents/pharmacology , Dependovirus/drug effects , Dependovirus/metabolism , Egtazic Acid/analogs & derivatives , Egtazic Acid/pharmacology , Gene Deletion , Genetic Vectors/chemistry , Golgi Apparatus/drug effects , Golgi Apparatus/virology , HEK293 Cells , Hepatocytes/drug effects , Hepatocytes/metabolism , Hepatocytes/virology , Humans , Injections, Intraventricular , Ionomycin/pharmacology , Lentivirus/genetics , Lentivirus/metabolism , Mice , Mice, Inbred C57BL , Stereotaxic Techniques , Transduction, Genetic , Vesiculovirus/genetics , Vesiculovirus/metabolism
11.
J Virol ; 94(21)2020 10 14.
Article in English | MEDLINE | ID: mdl-32796062

ABSTRACT

The viral protein Gag selects full-length HIV-1 RNA from a large pool of mRNAs as virion genome during virus assembly. Currently, the precise mechanism that mediates the genome selection is not understood. Previous studies have identified several sites in the 5' untranslated region (5' UTR) of HIV-1 RNA that are bound by nucleocapsid (NC) protein, which is derived from Gag during virus maturation. However, whether these NC binding sites direct HIV-1 RNA genome packaging has not been fully investigated. In this report, we examined the roles of single-stranded exposed guanosines at NC binding sites in RNA genome packaging using stable cell lines expressing competing wild-type and mutant HIV-1 RNAs. Mutant RNA packaging efficiencies were determined by comparing their prevalences in cytoplasmic RNA and in virion RNA. We observed that multiple NC binding sites affected RNA packaging; of the sites tested, those located within stem-loop 1 of the 5' UTR had the most significant effects. These sites were previously reported as the primary NC binding sites by using a chemical probe reverse-footprinting assay and as the major Gag binding sites by using an in vitro assay. Of the mutants tested in this report, substituting 3 to 4 guanosines resulted in <2-fold defects in packaging. However, when mutations at different NC binding sites were combined, severe defects were observed. Furthermore, combining the mutations resulted in synergistic defects in RNA packaging, suggesting redundancy in Gag-RNA interactions and a requirement for multiple Gag binding on viral RNA during HIV-1 genome encapsidation.IMPORTANCE HIV-1 must package its RNA genome during virus assembly to generate infectious viruses. To better understand how HIV-1 packages its RNA genome, we examined the roles of RNA elements identified as binding sites for NC, a Gag-derived RNA-binding protein. Our results demonstrate that binding sites within stem-loop 1 of the 5' untranslated region play important roles in genome packaging. Although mutating one or two NC-binding sites caused only mild defects in packaging, mutating multiple sites resulted in severe defects in genome encapsidation, indicating that unpaired guanosines act synergistically to promote packaging. Our results suggest that Gag-RNA interactions occur at multiple RNA sites during genome packaging; furthermore, there are functionally redundant binding sites in viral RNA.


Subject(s)
5' Untranslated Regions , HIV-1/genetics , Nucleocapsid Proteins/genetics , RNA, Viral/genetics , Viral Genome Packaging , Virion/genetics , gag Gene Products, Human Immunodeficiency Virus/genetics , Animals , Base Pairing , Binding Sites , Encephalomyocarditis virus/genetics , Encephalomyocarditis virus/metabolism , Genetic Engineering/methods , Genome, Viral , Guanosine/chemistry , Guanosine/metabolism , HEK293 Cells , HIV-1/metabolism , Humans , Mice , Mutation , Nucleic Acid Conformation , Nucleocapsid Proteins/metabolism , Nucleotide Motifs , Protein Binding , RNA, Viral/chemistry , RNA, Viral/metabolism , Vesiculovirus/genetics , Vesiculovirus/metabolism , Virion/metabolism , gag Gene Products, Human Immunodeficiency Virus/metabolism
12.
J Virol ; 94(18)2020 08 31.
Article in English | MEDLINE | ID: mdl-32641474

ABSTRACT

Human cytomegalovirus (HCMV) is a ubiquitous pathogen that can cause severe clinical disease in allograft recipients and infants infected in utero Virus-neutralizing antibodies defined in vitro have been proposed to confer protection against HCMV infection, and the virion envelope glycoprotein B (gB) serves as a major target of neutralizing antibodies. The viral fusion protein gB is nonfusogenic on its own and requires glycoproteins H (gH) and L (gL) for membrane fusion, which is in contrast to requirements of related class III fusion proteins, including vesicular stomatitis virus glycoprotein G (VSV-G) or baculovirus gp64. To explore requirements for gB's fusion activity, we generated a set of chimeras composed of gB and VSV-G or gp64, respectively. These gB chimeras were intrinsically fusion active and led to the formation of multinucleated cell syncytia when expressed in the absence of other viral proteins. Utilizing a panel of virus-neutralizing gB-specific monoclonal antibodies (MAbs), we could demonstrate that syncytium formation of the fusogenic gB/VSV-G chimera can be significantly inhibited by only a subset of neutralizing MAbs which target antigenic domain 5 (AD-5) of gB. This observation argues for differential modes of action of neutralizing anti-gB MAbs and suggests that blocking the membrane fusion function of gB could be one mechanism of antibody-mediated virus neutralization. In addition, our data have important implications for the further understanding of the conformation of gB that promotes membrane fusion as well as the identification of structures in AD-5 that could be targeted by antibodies to block this early step in HCMV infection.IMPORTANCE HCMV is a major global health concern, and antiviral chemotherapy remains problematic due to toxicity of available compounds and the emergence of drug-resistant viruses. Thus, an HCMV vaccine represents a priority for both governmental and pharmaceutical research programs. A major obstacle for the development of a vaccine is a lack of knowledge of the nature and specificities of protective immune responses that should be induced by such a vaccine. Glycoprotein B of HCMV is an important target for neutralizing antibodies and, hence, is often included as a component of intervention strategies. By generation of fusion-active gB chimeras, we were able to identify target structures of neutralizing antibodies that potently block gB-induced membrane fusion. This experimental system provides an approach to screen for antibodies that interfere with gB's fusogenic activity. In summary, our data will likely contribute to both rational vaccine design and the development of antibody-based therapies against HCMV.


Subject(s)
Antibodies, Neutralizing/pharmacology , Cytomegalovirus/genetics , Mutant Chimeric Proteins/genetics , Viral Envelope Proteins/genetics , Animals , Antibodies, Monoclonal/metabolism , Antibodies, Monoclonal/pharmacology , Antibodies, Neutralizing/metabolism , Antibodies, Viral/metabolism , Antibodies, Viral/pharmacology , Binding Sites , Cell Fusion , Cell Line , Cytomegalovirus/drug effects , Cytomegalovirus/metabolism , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Epithelial Cells/virology , Fibroblasts/drug effects , Fibroblasts/metabolism , Fibroblasts/virology , Gene Expression , Giant Cells/drug effects , Giant Cells/metabolism , Giant Cells/ultrastructure , Giant Cells/virology , HEK293 Cells , Humans , Mice , Mutant Chimeric Proteins/chemistry , Mutant Chimeric Proteins/metabolism , Primary Cell Culture , Protein Binding , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Stromal Cells/drug effects , Stromal Cells/metabolism , Stromal Cells/virology , Vesiculovirus/genetics , Vesiculovirus/metabolism , Viral Envelope Proteins/metabolism
13.
Annu Rev Biochem ; 89: 21-43, 2020 06 20.
Article in English | MEDLINE | ID: mdl-32569520

ABSTRACT

My coworkers and I have used animal viruses and their interaction with host cells to investigate cellular processes difficult to study by other means. This approach has allowed us to branch out in many directions, including membrane protein characterization, endocytosis, secretion, protein folding, quality control, and glycobiology. At the same time, our aim has been to employ cell biological approaches to expand the fundamental understanding of animal viruses and their pathogenic lifestyles. We have studied mechanisms of host cell entry and the uncoating of incoming viruses as well as the synthesis, folding, maturation, and intracellular movement of viral proteins and molecular assemblies. I have had the privilege to work in institutions in four different countries. The early years in Finland (the University of Helsinki) were followed by 6 years in Germany (European Molecular Biology Laboratory), 16 years in the United States (Yale School of Medicine), and 16 years in Switzerland (ETH Zurich).


Subject(s)
Calnexin/genetics , Calreticulin/genetics , Host-Pathogen Interactions/genetics , Influenza A virus/genetics , Picornaviridae/genetics , Viral Proteins/genetics , Virology/history , Animals , Calnexin/chemistry , Calnexin/metabolism , Calreticulin/chemistry , Calreticulin/metabolism , Cell Line , Endoplasmic Reticulum/metabolism , Endoplasmic Reticulum/virology , Endosomes/metabolism , Endosomes/virology , Gene Expression Regulation , History, 20th Century , History, 21st Century , Humans , Influenza A virus/metabolism , Picornaviridae/metabolism , Protein Folding , Semliki forest virus/genetics , Semliki forest virus/metabolism , Vesiculovirus/genetics , Vesiculovirus/metabolism , Viral Proteins/chemistry , Viral Proteins/metabolism , Virus Internalization
14.
Virology ; 543: 54-62, 2020 04.
Article in English | MEDLINE | ID: mdl-32056847

ABSTRACT

Hantaviruses are rodent-borne hemorrhagic fever viruses leading to serious diseases. Viral attachment and entry represent the first steps in virus transmission and are promising targets for antiviral therapeutic intervention. Here we investigated receptor use in human airway epithelium of the Old and New World hantaviruses Hantaan virus (HTNV) and Andes virus (ANDV). Using a biocontained recombinant vesicular stomatitis virus pseudotype platform, we provide first evidence for a role of the cellular phosphatidylserine (PS) receptors of the T-cell immunoglobulin and mucin (TIM) protein family in HTNV and ANDV infection. In line with previous studies, HTNV, but not ANDV, was able to use glycosaminoglycan heparan sulfate and αvß3 integrin as co-receptors. In sum, our studies demonstrate for the first time that hantaviruses make use of apoptotic mimicry for infection of human airway epithelium, which may explain why these viruses can easily break the species barrier.


Subject(s)
Hantaan virus/metabolism , Membrane Glycoproteins/metabolism , Orthohantavirus/metabolism , Receptors, Cell Surface/metabolism , Receptors, Virus/metabolism , Respiratory Mucosa/virology , Viral Envelope Proteins/metabolism , Animals , Bacteriocins/pharmacology , Cell Line, Tumor , Epithelial Cells/metabolism , Epithelial Cells/virology , Hantaan virus/drug effects , Hantaan virus/pathogenicity , Hantaan virus/physiology , Orthohantavirus/physiology , Haplorhini , Heparitin Sulfate/pharmacology , Hepatitis A Virus Cellular Receptor 1/metabolism , Humans , Integrins/metabolism , Membrane Proteins/metabolism , Molecular Mimicry , Peptides/pharmacology , Proto-Oncogene Proteins/metabolism , Receptor Protein-Tyrosine Kinases/metabolism , Respiratory Mucosa/metabolism , Vesiculovirus/metabolism , Vesiculovirus/physiology , Axl Receptor Tyrosine Kinase
15.
J Virol ; 94(6)2020 02 28.
Article in English | MEDLINE | ID: mdl-31896592

ABSTRACT

Vesicular stomatitis virus (VSV) is an archetypical member of Mononegavirales, viruses with a genome of negative-sense single-stranded RNA (-ssRNA). Like other viruses of this order, VSV encodes a unique polymerase, a complex of viral L (large, the enzymatic component) protein and P (phosphoprotein, a cofactor component). The L protein has a modular layout consisting of a ring-shaped core trailed by three accessory domains and requires an N-terminal segment of P (P N-terminal disordered [PNTD]) to perform polymerase activity. To date, a binding site for P on L had not been described. In this report, we show that the connector domain of the L protein, which previously had no assigned function, binds a component of PNTD We further show that this interaction is a positive regulator of viral RNA synthesis, and that the interfaces mediating it are conserved in other members of Mononegavirales Finally, we show that the connector-P interaction fits well into the existing structural information of VSV L.IMPORTANCE This study represents the first functional assignment of the connector domain of a Mononegavirales L protein. Furthermore, this study localizes P polymerase cofactor activity to specific amino acids. The functional necessity of this interaction, combined with the uniqueness of L and P proteins to the order Mononegavirales, makes disruption of the P-connector site a potential target for developing antivirals against other negative-strand RNA viruses. Furthermore, the connector domain as an acceptor site for the P protein represents a new understanding of Mononegavirales L protein biology.


Subject(s)
Phosphoproteins/chemistry , Vesiculovirus/chemistry , Viral Proteins/chemistry , Phosphoproteins/genetics , Phosphoproteins/metabolism , Vesiculovirus/genetics , Vesiculovirus/metabolism , Viral Proteins/genetics , Viral Proteins/metabolism
16.
J Biosci ; 44(2)2019 Jun.
Article in English | MEDLINE | ID: mdl-31180044

ABSTRACT

ErbB-3 binding protein 1 (Ebp1) is a host protein which binds ErbB-3 receptor to induce signalling events for cell growth regulation. In addition, Ebp1 also interacts with ribonucleoprotein complexes. In recent times, Ebp1 was found to play an antagonistic role in viral infections caused by Influenza and Rinderpest viruses. In our present work we have tried to understand the role of Ebp1 in Chandipura virus (CHPV) infection. We have observed an induction in Ebp1 expression upon CHPV infection similar to other viruses. However, unlike other viruses an overexpressed Ebp1 only reduces viral protein expression, but does not affect its progeny formation. Additionally, this effect is being carried out in an indirect manner, as there is no interaction between Ebp1 and viral proteins. This is despite Ebp1's presence in viral inclusion bodies.


Subject(s)
Adaptor Proteins, Signal Transducing/genetics , Host-Pathogen Interactions/genetics , Neurons/metabolism , RNA-Binding Proteins/genetics , Vesiculovirus/genetics , Virus Replication , Adaptor Proteins, Signal Transducing/metabolism , Animals , Cell Line, Tumor , Chlorocebus aethiops , Gene Expression Regulation , Humans , Inclusion Bodies, Viral/chemistry , Neurons/virology , Plasmids/chemistry , Plasmids/metabolism , RNA-Binding Proteins/metabolism , Signal Transduction , Transfection , Vero Cells , Vesiculovirus/growth & development , Vesiculovirus/metabolism , Viral Plaque Assay
17.
Nat Commun ; 10(1): 2098, 2019 05 08.
Article in English | MEDLINE | ID: mdl-31068585

ABSTRACT

Hepatitis D virus (HDV) doesn't encode envelope proteins for packaging of its ribonucleoprotein (RNP) and typically relies on the surface glycoproteins (GPs) from hepatitis B virus (HBV) for virion assembly, envelopment and cellular transmission. HDV RNA genome can efficiently replicate in different tissues and species, raising the possibility that it evolved, and/or is still able to transmit, independently of HBV. Here we show that alternative, HBV-unrelated viruses can act as helper viruses for HDV. In vitro, envelope GPs from several virus genera, including vesiculovirus, flavivirus and hepacivirus, can package HDV RNPs, allowing efficient egress of HDV particles in the extracellular milieu of co-infected cells and subsequent entry into cells expressing the relevant receptors. Furthermore, HCV can propagate HDV infection in the liver of co-infected humanized mice for several months. Further work is necessary to evaluate whether HDV is currently transmitted by HBV-unrelated viruses in humans.


Subject(s)
Coinfection/transmission , Hepatitis D/transmission , Hepatitis Delta Virus/physiology , Virus Assembly , Animals , Cell Line, Tumor , Coinfection/virology , Flavivirus/metabolism , Hepacivirus/metabolism , Hepacivirus/pathogenicity , Hepatitis D/virology , Hepatitis Delta Virus/isolation & purification , Hepatitis Delta Virus/pathogenicity , Hepatocytes/transplantation , Hepatocytes/virology , Humans , Mice , Mice, Inbred NOD , Mice, Transgenic , Primary Cell Culture , RNA, Viral/isolation & purification , Ribonucleoproteins/metabolism , Vesiculovirus/metabolism , Viral Envelope Proteins/metabolism , Virion/metabolism
18.
Biochem Biophys Res Commun ; 514(2): 538-544, 2019 06 25.
Article in English | MEDLINE | ID: mdl-31060775

ABSTRACT

Successful HIV-1 infection and subsequent replication deeply depend on how the virus usurps the host cell machinery. Identification and functional characterization of these host factors may represent a critical strategy for developing novel anti-HIV-1 therapy. Here, expression cloning with a cDNA expression library identified as an inhibitor of HIV-1 infection, a carboxy-terminally truncated form of human POZ/BTB and AT-hook- containing Zinc finger protein 1 (PATZ1), a transcriptional regulatory factor implicated in development and cancer. Knockdown or knockout of endogenous PATZ1 revealed a supportive role of PATZ1 in HIV-1 infection, but not in transduction with murine leukemia virus-based retroviral vector. More specifically, knockdown or knockout of PATZ1 impaired the viral cDNA synthesis but not the entry process and expression of two PATZ1 isoforms in PATZ1-KO cells restored susceptibility to HIV-1 infection. These results indicate that PATZ1 plays an important role in HIV-1 infection.


Subject(s)
HIV-1/genetics , Host-Pathogen Interactions/genetics , Kruppel-Like Transcription Factors/genetics , Lymphocytes/virology , RNA, Viral/genetics , Repressor Proteins/genetics , Animals , Cell Line, Tumor , Gene Expression Regulation , Gene Library , HEK293 Cells , HIV-1/metabolism , HIV-1/pathogenicity , Humans , Kruppel-Like Transcription Factors/antagonists & inhibitors , Kruppel-Like Transcription Factors/metabolism , Leukemia Virus, Murine/genetics , Leukemia Virus, Murine/metabolism , Lymphocytes/pathology , Mice , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , RNA, Viral/biosynthesis , Repressor Proteins/antagonists & inhibitors , Repressor Proteins/metabolism , Signal Transduction , Vesiculovirus/genetics , Vesiculovirus/metabolism
19.
J Neurovirol ; 25(4): 508-519, 2019 08.
Article in English | MEDLINE | ID: mdl-31020497

ABSTRACT

Astrocytes are susceptible to HIV infection and potential latent HIV reservoirs. Tat is one of three abundantly expressed HIV early genes in HIV-infected astrocytes and has been shown to be a major pathogenic factor for HIV/neuroAIDS. In this study, we sought to determine if and how Tat expression would affect HIV infection and latency in astrocytes. Using the glycoprotein from vesicular stomatitis virus-pseudotyped red-green HIV (RGH) reporter viruses, we showed that HIV infection was capable of establishing HIV latency in astrocytes. We also found that Tat expression decreased the generation of latent HIV-infected cells. Activation of latent HIV-infected astrocytes showed that treatment of GSK126, a selective inhibitor of methyltransferase enhancer of zeste homolog 2 (Ezh2) that is specifically responsible for tri-methylation of histone 3 lysine 27 (H3K27me3), led to activation of significantly more latent HIV-infected Tat-expressing astrocytes. Molecular analysis showed that H3K27me3, Ezh2, MeCP2, and Tat all exhibited a similar bimodal expression kinetics in the course of HIV infection and latency in astrocytes, although H3K27me3, Ezh2, and MeCP2 were expressed higher in Tat-expressing astrocytes and their expression were peaked immediately preceding Tat expression. Subsequent studies showed that Tat expression alone was sufficient to induce H3K27me3 expression, likely through its regulation of Ezh2 and MeCP2 expression. Taken together, these results showed for the first time that Tat expression induced H3K27me3 expression and contributed to HIV latency in astrocytes and suggest a new role and novel mechanism for Tat in HIV latency.


Subject(s)
Astrocytes/metabolism , Enhancer of Zeste Homolog 2 Protein/genetics , Histones/genetics , Host-Pathogen Interactions/genetics , Methyl-CpG-Binding Protein 2/genetics , Virus Latency/genetics , tat Gene Products, Human Immunodeficiency Virus/genetics , Astrocytes/drug effects , Astrocytes/virology , Cell Line, Tumor , Enhancer of Zeste Homolog 2 Protein/antagonists & inhibitors , Enhancer of Zeste Homolog 2 Protein/metabolism , Fibroblasts/drug effects , Fibroblasts/metabolism , Fibroblasts/virology , Gene Expression Regulation , Genes, Reporter , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , HEK293 Cells , HIV-1/drug effects , HIV-1/genetics , HIV-1/growth & development , HIV-1/metabolism , Histones/metabolism , Host-Pathogen Interactions/drug effects , Humans , Indoles/pharmacology , Jurkat Cells , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Methyl-CpG-Binding Protein 2/metabolism , Methylation , Pyridones/pharmacology , Signal Transduction , Vesiculovirus/genetics , Vesiculovirus/metabolism , Virus Latency/drug effects , tat Gene Products, Human Immunodeficiency Virus/metabolism , Red Fluorescent Protein
20.
Virology ; 532: 22-29, 2019 06.
Article in English | MEDLINE | ID: mdl-30999160

ABSTRACT

Priming of the viral glycoprotein (GP) by the cellular proteases cathepsin B and L (CatB, CatL) is believed to be essential for cell entry of filoviruses. However, pseudotyping systems that predominantly produce non-filamentous particles have frequently been used to prove this concept. Here, we report that GP-mediated entry of retroviral-, rhabdoviral and filoviral particles depends on CatB/CatL activity and that this effect is cell line-independent. Moreover, we show that the human cell line Calu-3, which expresses low amounts of CatL, is largely resistant to entry driven by diverse filovirus GPs. Finally, we demonstrate that Calu-3 cell entry mediated by certain filovirus GPs can be rescued upon directed expression of CatL or DC-SIGN. Our results identify Calu-3 cells as largely resistant to filovirus GP-driven entry and demonstrate that entry is limited at the stage of virion attachment and GP priming.


Subject(s)
Cathepsin L/genetics , Cell Adhesion Molecules/genetics , Ebolavirus/genetics , Epithelial Cells/immunology , Lectins, C-Type/genetics , Receptors, Cell Surface/genetics , Viral Proteins/genetics , A549 Cells , Animals , Cathepsin B/antagonists & inhibitors , Cathepsin B/genetics , Cathepsin B/immunology , Cathepsin B/metabolism , Cathepsin L/antagonists & inhibitors , Cathepsin L/immunology , Cathepsin L/metabolism , Cell Adhesion Molecules/antagonists & inhibitors , Cell Adhesion Molecules/immunology , Cell Adhesion Molecules/metabolism , Cell Line, Tumor , Chlorocebus aethiops , Cysteine Proteinase Inhibitors/pharmacology , Dipeptides/pharmacology , Ebolavirus/growth & development , Ebolavirus/metabolism , Epithelial Cells/metabolism , Epithelial Cells/virology , Gene Expression Regulation , Glycoproteins/genetics , Glycoproteins/metabolism , HEK293 Cells , Host-Pathogen Interactions/genetics , Humans , Lectins, C-Type/antagonists & inhibitors , Lectins, C-Type/immunology , Lectins, C-Type/metabolism , Leucine/analogs & derivatives , Leucine/pharmacology , Marburgvirus/genetics , Marburgvirus/growth & development , Marburgvirus/metabolism , Receptors, Cell Surface/antagonists & inhibitors , Receptors, Cell Surface/immunology , Receptors, Cell Surface/metabolism , Signal Transduction , Vero Cells , Vesiculovirus/genetics , Vesiculovirus/growth & development , Vesiculovirus/metabolism , Viral Proteins/metabolism , Virion/genetics , Virion/growth & development , Virion/metabolism , Virus Internalization/drug effects
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