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Mol Biol (Mosk) ; 44(1): 20-7, 2010.
Article in English | MEDLINE | ID: mdl-20198855

ABSTRACT

Complete coding sequences of three Black-boned sheep (Ovis aries) genes Rab2A, Rab3A and Rab7A were amplified using reverse transcription polymerase chain reaction (RT-PCR) based on the conserved sequence information of cattle or other mammals known to be highly homologous to sheep ESTs. The Black-boned sheep Rab2A gene encodes a protein of 226 amino acids which contains the conserved putative RabL2 domain and is highly homologous to the Rab2A proteins of seven other species--cattle (96%), human (83%), Sumatran orangutan (82%), rat (81%), mouse (80%), African clawed frog (72%) and zebrafish (71%). The Black-boned sheep Rab3A gene encodes a protein of 220 amino acids that contains the conserved putative Rab3 domain and is very similar to the Rab3A proteins of four species--cattle (99%), African clawed frog (99%), Western clawed frog (98%) and zebrafish (95%). And the Black-boned sheep Rab7A gene encodes a protein of 207 amino acids that contains the conserved putative Rab7 domain and has high homology with the Rab7A proteins of six other species--human (99%), dog (99%), Sumatran orangutan (99%), zebrafish (97%), rabbit (97%) and African clawed frog (96%). Analysis of the phylogenetic tree has demonstrated that the Black-boned sheep Rab2A, Rab3A and Rab7A proteins share a common ancestor and the tissue expression analysis has shown that the corresponding genes are expressed in a range of tissues including leg muscle, kidney, skin, longissimus dorsi muscle, spleen, heart and liver. Our experiment is the first to provide the primary foundation for a further insight into these three sheep genes.


Subject(s)
Sheep, Domestic/genetics , rab GTP-Binding Proteins/genetics , rab2 GTP-Binding Protein/genetics , rab3A GTP-Binding Protein/genetics , Amino Acid Sequence , Animals , Cattle , Dogs , Gene Expression Profiling , Humans , Mice , Molecular Sequence Data , Phylogeny , Protein Structure, Secondary , Protein Structure, Tertiary , Rabbits , Rats , Tissue Distribution , rab GTP-Binding Proteins/chemistry , rab GTP-Binding Proteins/classification , rab2 GTP-Binding Protein/chemistry , rab2 GTP-Binding Protein/classification , rab3A GTP-Binding Protein/chemistry , rab3A GTP-Binding Protein/classification , rab7 GTP-Binding Proteins
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