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1.
Chembiochem ; 12(7): 1097-104, 2011 May 02.
Article in English | MEDLINE | ID: mdl-21488138

ABSTRACT

The HIV-1 Rev protein is responsible for shuttling partially spliced and unspliced viral mRNA out of the nucleus. This is a crucial step in the HIV-1 lifecycle, thus making Rev an attractive target for the design of anti-HIV drugs. Despite its importance, there is a lack of structural, biophysical, and quantitative information about Rev. This is mainly because of its tendency to undergo self-assembly and aggregation; this makes it very difficult to express and handle. To address this knowledge gap, we have developed two new highly efficient and reproducible methods to prepare Rev in large quantities for biochemical and structural studies: 1) Chemical synthesis by using native chemical ligation coupled with desulfurization. Notably, we have optimized our synthesis to allow for a one-pot approach for the ligation and desulfurization steps; this reduced the number of purification steps and enabled the obtaining of desired protein in excellent yield. Several challenges emerged during the design of this Rev synthesis, such as racemization, reduced solubility, formylation during thioester synthesis, and the necessity for using orthogonal protection during desulfurization; solutions to these problems were found. 2) A new method for expression and purification by using a vector that contained an HLT tag, followed by purification with a Ni column, a cation exchange column, and gel filtration. Both methods yielded highly pure and folded Rev. The CD spectra of the synthetic and recombinant Rev proteins were identical, and consistent with a predominantly helical structure. These advances should facilitate future studies that aim at a better understanding of the structure and function of the protein.


Subject(s)
rev Gene Products, Human Immunodeficiency Virus/biosynthesis , rev Gene Products, Human Immunodeficiency Virus/chemical synthesis , Molecular Structure , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , rev Gene Products, Human Immunodeficiency Virus/chemistry , rev Gene Products, Human Immunodeficiency Virus/isolation & purification
2.
J Neurovirol ; 16(1): 33-40, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20113193

ABSTRACT

Vitamin A (VA) deficiency in human immunodeficiency virus (HIV) infection has been associated with more progressive HIV disease, which may be enhanced by opioid use. In these studies, we examined the effects of VA deficiency and morphine on frontal cortex neuronal numbers in the HIV-1 transgenic (Tg) rat. These studies showed that total numbers of neurons were similar for rats on the VA-deficient diet as for rats on the normal diet and these numbers were not affected by treatment with morphine. In contrast, numbers of neurons that expressed the calcium-binding protein parvalbumin, which is a marker interneurons that express the inhibitory neurotransmitter gamma-aminobutyric acid (GABAergic neurons) were decreased for wild-type (Wt) rats on the VA-deficient diet and for Wt rats treated with morphine. In addition, parvalbumin+ neurons were also decreased for Tg rats on a normal diet but increased to normal levels when these animals were placed on the VA-deficient diet and treated with morphine. Analysis of expression of the genes that code for the HIV regulatory proteins vif, vpr, nef, and tat in frontal cortex and adjacent subcortical white matter showed that tat expression was increased in the morphine-treated Tg rat on the VA-deficient diet as compared to untreated Tg rats on the normal diet and untreated VA-deficient rats. These studies therefore suggest that VA deficiency, opioid exposure, and HIV infection alone and in combination may potentially alter neuronal metabolic activity and induce cellular stress, resulting in the observed changes in levels of parvalbumin expression. The specific mechanisms that underlie these effects require further study.


Subject(s)
Analgesics, Opioid/adverse effects , Gene Expression Regulation, Viral , HIV Infections/pathology , HIV Infections/virology , HIV-1 , Morphine/adverse effects , Neurons/drug effects , Neurons/pathology , Parvalbumins/biosynthesis , Vitamin A Deficiency/pathology , Animals , Cell Count , Cerebral Cortex/drug effects , Cerebral Cortex/metabolism , Cerebral Cortex/pathology , Cerebral Cortex/virology , Gene Expression Regulation, Viral/drug effects , Gene Expression Regulation, Viral/physiology , HIV Infections/complications , HIV Infections/metabolism , HIV-1/genetics , HIV-1/metabolism , Humans , Neurons/metabolism , Neurons/virology , Rats , Vitamin A Deficiency/etiology , Vitamin A Deficiency/metabolism , nef Gene Products, Human Immunodeficiency Virus/biosynthesis , nef Gene Products, Human Immunodeficiency Virus/genetics , rev Gene Products, Human Immunodeficiency Virus/biosynthesis , rev Gene Products, Human Immunodeficiency Virus/genetics , tat Gene Products, Human Immunodeficiency Virus/biosynthesis , tat Gene Products, Human Immunodeficiency Virus/genetics , vif Gene Products, Human Immunodeficiency Virus/biosynthesis , vif Gene Products, Human Immunodeficiency Virus/genetics , vpr Gene Products, Human Immunodeficiency Virus/biosynthesis , vpr Gene Products, Human Immunodeficiency Virus/genetics
3.
Virus Genes ; 40(3): 341-6, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20151187

ABSTRACT

Expression of the human immunodeficiency virus type 1 (HIV-1) Rev protein is essential for completion of the viral life cycle. Rev mediates nuclear export of partially spliced and unspliced viral transcripts and therefore bears a nuclear localization signal (NLS) as well as a nuclear export signal (NES), which allow its nucleocytoplasmic shuttling. Attempts to express the wild-type Rev protein in eukaryotic human cultured cells have encountered difficulties and so far have failed. Here we show that accumulation of Rev, which occurs in nondividing Rev-expressing cells or when such cells reach confluency, results in death of these cells. Cell death was also promoted by addition of a cell permeable peptide bearing the Rev-NES sequence, but not by the Rev-NLS peptide. Our results probably indicate that binding of excess amounts of the Rev protein or the NES peptide to the exportin receptor CRM1 results in cells' death.


Subject(s)
Cell Death , Eukaryotic Cells/virology , Gene Expression , HIV-1/pathogenicity , Karyopherins/metabolism , Receptors, Cytoplasmic and Nuclear/metabolism , Virulence Factors/biosynthesis , rev Gene Products, Human Immunodeficiency Virus/biosynthesis , Cell Line , Humans , Protein Binding , Exportin 1 Protein
4.
Vaccine ; 26(29-30): 3735-41, 2008 Jul 04.
Article in English | MEDLINE | ID: mdl-18539368

ABSTRACT

The limitations of highly active anti-retroviral therapy (HAART) have necessitated the development of alternative therapeutic strategies. One of the approaches that has gained prominence in recent years is therapeutic vaccination. We decided to assess the capacity of mature dendritic cells, derived from blood monocytes of HIV-1 infected patients, to generate functional T-cell responses. For this purpose, we constructed a chimeric mRNA encoding the proteins Tat, Rev and Nef. The TaReNef encoding information was linked to the HLA class II-targeting sequence of DC-LAMP. Broadly directed HIV-specific CD4(+) and CD8(+) cytotoxic T cells exhibiting a poly-functional cytokine secretion pattern were generated by co-culturing with autologous chimeric mRNA electroporated dendritic cells. Thus, administration of ex vivo generated dendritic cells expressing the early proteins Tat, Rev and Nef might offer a promising approach for therapeutic vaccination in HIV-1 infection.


Subject(s)
CD4-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/immunology , Dendritic Cells/immunology , nef Gene Products, Human Immunodeficiency Virus/immunology , rev Gene Products, Human Immunodeficiency Virus/immunology , tat Gene Products, Human Immunodeficiency Virus/immunology , Adult , Coculture Techniques , Cytokines/metabolism , Electroporation , HIV Infections/immunology , Humans , Lysosomal Membrane Proteins/genetics , Lysosomal Membrane Proteins/immunology , Male , Middle Aged , Molecular Sequence Data , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/immunology , Sequence Analysis, DNA , nef Gene Products, Human Immunodeficiency Virus/biosynthesis , rev Gene Products, Human Immunodeficiency Virus/biosynthesis , tat Gene Products, Human Immunodeficiency Virus/biosynthesis
5.
Amino Acids ; 33(2): 351-8, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17578650

ABSTRACT

The putative translation factor eIF5A is essential for cell viability and is highly conserved from archaebacteria to mammals. This factor is the only cellular protein that undergoes an essential posttranslational modification dependent on the polyamine spermidine, called hypusination. This review focuses on the functional characterization of eIF5A. Although this protein was originally identified as a translation initiation factor, subsequent studies did not support a role for eIF5A in general translation initiation. eIF5A has also been implicated in nuclear export of HIV-1 Rev and mRNA decay, but these findings are controversial in the literature and may reflect secondary effects of eIF-5A function. Next, the involvement of eIF5A and hypusination in the control of the cell cycle and proliferation in various organisms is reviewed. Finally, recent evidence in favor of reconsidering the role of eIF5A as a translation factor is discussed. Future studies may reveal the specific mechanism by which eIF5A affects protein synthesis.


Subject(s)
Peptide Initiation Factors/physiology , Protein Biosynthesis/physiology , RNA-Binding Proteins/physiology , Amino Acid Sequence , Animals , Cell Cycle/drug effects , Humans , Molecular Sequence Data , Peptide Initiation Factors/genetics , RNA, Messenger/metabolism , RNA-Binding Proteins/genetics , Sequence Alignment , rev Gene Products, Human Immunodeficiency Virus/biosynthesis , Eukaryotic Translation Initiation Factor 5A
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