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1.
J Appl Microbiol ; 124(4): 943-957, 2018 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-29094428

RESUMEN

Galicia (NW Spain) has 1490 km of coastline, and its particular topography, characterized by the presence of fiord-like inlets, called rías, with an important primary production, makes this region very favourable for shellfish growth and culture. In fact, Galicia is one of the most important mussel producers in the world. Due to its proximity to cities and villages and the anthropogenic activities in these estuaries, and despite the routine official controls on the bivalve harvesting areas, contamination with material of faecal origin is sometimes possible but, current regulation based on Escherichia coli as an indicator micro-organism has been revealed as useful for bacterial contaminants, this is not the case for enteric viruses. The aim of this review is to offer a picture on the situation of different harvesting areas in Galicia, from a virological standpoint. A recompilation of results obtained in the last 20 years is presented, including not only the data for the well-known agents norovirus (NoV) and hepatitis A virus (HAV) but also data on emerging viral hazards, including sapovirus (SaV), hepatitis E virus (HEV) and aichivirus (AiV). Epidemiological differences related to diverse characteristics of the harvesting areas, viral genotype distribution or epidemiological links between environmental and clinical strains will also be presented and discussed. The presentation of these historical data all together could be useful for future decisions by competent authorities for a better management of shellfish growing areas.


Asunto(s)
Bivalvos/virología , Enterovirus/aislamiento & purificación , Contaminación de Alimentos/estadística & datos numéricos , Enfermedades Transmitidas por los Alimentos/virología , Mariscos/virología , Animales , Enterovirus/clasificación , Enterovirus/genética , Contaminación de Alimentos/análisis , Enfermedades Transmitidas por los Alimentos/epidemiología , Humanos , Prevalencia , España/epidemiología
2.
J Fish Dis ; 40(9): 1185-1193, 2017 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-28093770

RESUMEN

Diseases caused by bacteria belonging to the genus Vibrio are a common, as yet unresolved, cause of mortality in shellfish hatcheries. In this study, we report the results of routine microbiological monitoring of larval cultures of the carpet shell clam Ruditapes decussatus in a hatchery in Galicia (NW Spain). Previous episodes of mortality with signs similar to those of vibriosis affecting other species in the installation indicated the possibility of bacterial infection and led to division of the culture at the early D-veliger larval stage. One batch was cultured under routine conditions, and the other was experimentally treated with antibiotic (chloramphenicol). Differences in larval survival were assessed, and culturable bacterial population in clams and sea water was evaluated, with particular attention given to vibrios. Severe mortalities were recorded from the first stages of culture onwards. The pathogen Vibrio tubiashii subsp. europaeus was detected in both batches, mainly associated with larvae. Moreover, initial detection of the pathogen in the eggs suggested the vertical transmission from broodstock as a possible source. Experimental use of antibiotic reduced the presence and diversity of vibrios in sea water, but proved inefficient in controlling vibrios associated with larvae from early stages and it did not stop mortalities.


Asunto(s)
Bivalvos/microbiología , Vibrio/fisiología , Animales , Acuicultura , Bivalvos/crecimiento & desarrollo , Larva/crecimiento & desarrollo , Larva/microbiología , Filogenia , ARN Bacteriano/genética , ARN Ribosómico 16S/genética , Análisis de Secuencia de ARN/veterinaria , España , Vibrio/genética , Vibrio/aislamiento & purificación
3.
J Fish Dis ; 40(3): 411-424, 2017 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-27502011

RESUMEN

The pharmacokinetics of florfenicol (FF) in turbot (Scophthalmus maximus) was studied after single intravenous (10 mg kg-1 ) and oral (100 mg kg-1 ) administration. The plasma concentration-time data of florfenicol were described by an open one-compartment model. The elimination half-life (t1/2 ) was estimated to be 21.0 h, and the total body clearance, Cl, was determined as 0.028 L kg h-1 . The apparent volume distribution (Vd ) was calculated to be 0.86 L kg-1 and the mean residence time (MRTiv ) was 30.2 h. Following oral administration, the maximum plasma concentration (Cmax ) of 55.4 µg mL-1 was reached at 12 h (Tmax ). The absorption constant (ka ) was 0.158 h-1 . The bioavailability was estimated to be 57.1%. The low bioavailability observed at higher doses was explained by the saturation of the mechanisms of absorption. The drug absorption process was limited by its inherent low solubility, which limited the amount of available FF absorbed in the gastrointestinal tract. Based on the pharmacokinetic data, an optimal dosing schedule for FF administration is hereby provided. Based on the minimum inhibitory concentration found for susceptible strains of Aeromonas salmonicida, oral FF administration of first, an initial dose of 30 mg FF kg-1 , followed by 6 maintenance doses at 18 mg kg-1 /daily could be effective against furunculosis in turbot.


Asunto(s)
Aeromonas salmonicida/efectos de los fármacos , Peces Planos , Forunculosis/prevención & control , Infecciones por Bacterias Gramnegativas/veterinaria , Tianfenicol/análogos & derivados , Administración Intravenosa/veterinaria , Administración Oral , Animales , Antibacterianos/administración & dosificación , Antibacterianos/farmacocinética , Antibacterianos/farmacología , Disponibilidad Biológica , Relación Dosis-Respuesta a Droga , Peces Planos/metabolismo , Forunculosis/microbiología , Infecciones por Bacterias Gramnegativas/tratamiento farmacológico , Infecciones por Bacterias Gramnegativas/microbiología , Infecciones por Bacterias Gramnegativas/prevención & control , Semivida , Tianfenicol/administración & dosificación , Tianfenicol/farmacocinética , Tianfenicol/farmacología
4.
J Appl Microbiol ; 118(6): 1264-75, 2015 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-25728297

RESUMEN

AIMS: Outbreaks of disease caused by some Vibrio species represent the main production bottleneck in shellfish hatcheries. Although the phytoplankton used as food is one of the main sources of bacteria, studies of the associated bacterial populations, specifically vibrios, are scarce. The aim of the study was the microbiological monitoring of the microalgae as the first step in assessing the risk disease for bivalve cultures. METHODS AND RESULTS: Two phytoplankton production systems were sampled weekly throughout 1-year period in a bivalve hatchery. Quantitative analysis revealed high levels of marine heterotrophic bacteria in both systems throughout the study. Presumptive vibrios were detected occasionally and at low concentrations. In most of the cases, they belonged to the Splendidus and Harveyi clades. CONCLUSIONS: The early detection of vibrios in the microalgae may be the key for a successful bivalve culture. Their abundance and diversity were affected by factors related to the hatchery environment. SIGNIFICANCE AND IMPACT OF THE STUDY: This work represents the first long study where the presence of vibrios was evaluated rigorously in phytoplankton production systems and provides a suitable microbiological protocol to control and guarantee the quality of the algal cultures to avoid the risk of transferring potential pathogens to shellfish larvae and/or broodstock.


Asunto(s)
Bivalvos/microbiología , Fitoplancton/crecimiento & desarrollo , Mariscos/microbiología , Vibrio/crecimiento & desarrollo , Animales , Carga Bacteriana , Biodiversidad , Contaminación de Alimentos/análisis , Datos de Secuencia Molecular , Fitoplancton/clasificación , Fitoplancton/genética , Fitoplancton/aislamiento & purificación , Vibrio/clasificación , Vibrio/genética , Vibrio/aislamiento & purificación
5.
J Fish Dis ; 37(3): 209-17, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23496328

RESUMEN

Hatchery culture of the razor clam, Solen marginatus (Pulteney), has recently been developed in Galicia (NW Spain). However, recurrent episodes of mortalities of larval and post-larval cultures have been recorded during the course of various studies. The disease signs were similar to those described for other bivalve species in outbreaks caused by bacteria of the genus Vibrio. In this article, we present the results of microbiological monitoring of two batches of razor clams with different survival rates. All fermentative isolates were identified as members of the Splendidus clade within the genus Vibrio. Some of these isolates, identified as Vibrio splendidus-like, were clearly associated with the batch suffering mortalities, indicating their possible role as pathogens. Similar strains were found in the broodstock, suggesting vertical transmission of these bacteria. This is the first study of the microbiota associated with hatchery culture of S. marginatus, and the results will provide useful information for the optimization of a protocol for hatchery culture of this bivalve species.


Asunto(s)
Bivalvos/microbiología , Vibrio/fisiología , Animales , Antibacterianos/farmacología , Acuicultura , Cloranfenicol/farmacología , Recuento de Colonia Microbiana , ADN Bacteriano/genética , Larva/microbiología , Reacción en Cadena de la Polimerasa , ARN Ribosómico 16S/genética , Vibrio/efectos de los fármacos , Vibrio/genética , Vibrio/aislamiento & purificación
6.
Dis Aquat Organ ; 95(3): 253-8, 2011 Jul 12.
Artículo en Inglés | MEDLINE | ID: mdl-21932538

RESUMEN

Edwardsiella tarda is an enterobacterial fish pathogen that causes mortality in various fish species worldwide. In this study, we analyzed the intraspecific variability in a collection of E. tarda strains isolated from turbot. To do this we employed 4 polymerase chain reaction (PCR)-based methods: (1) random amplified polymorphic DNA (RAPD), (2) enterobacterial repetitive intergenic consensus-PCR (ERIC-PCR), (3) repetitive extragenic palindromic-PCR (REP-PCR) and (4) BOX-PCR. E. tarda isolates from different hosts were also included for comparison. E. tarda strains from turbot showed high molecular homogeneity when RAPD (primers P3 and P6), ERIC-PCR and BOX-PCR were employed. However, with regard to the REP-PCR and RAPD (primers P4 and P5) techniques, different genetic groups could be established within these isolates using either technique. The 2 RAPD types presented an 85% similarity, while those obtained with REP-PCR showed 74% similarity. Based on the results obtained, although a high genetic homogeneity was found in turbot isolates, the RAPD test (with primers P4 and P5) and REP-PCR were capable of discrimination within these strains, and they are therefore considered the most appropriate typing methods for studies of edwardsiellosis in turbot.


Asunto(s)
Edwardsiella tarda/genética , Infecciones por Enterobacteriaceae/veterinaria , Enfermedades de los Peces/microbiología , Peces Planos , Variación Genética , Animales , Infecciones por Enterobacteriaceae/microbiología , Filogenia , Reacción en Cadena de la Polimerasa/métodos , Reacción en Cadena de la Polimerasa/veterinaria , Técnica del ADN Polimorfo Amplificado Aleatorio/métodos , Técnica del ADN Polimorfo Amplificado Aleatorio/veterinaria
7.
Dis Aquat Organ ; 93(2): 111-6, 2011 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-21381517

RESUMEN

The susceptibility of sole Solea senegalensis to infection with 3 viral haemorrhagic septicaemia virus (VHSV) strains obtained from wild Greenland halibut Reinhardtius hippoglossoides and farmed turbot Psetta maxima was demonstrated. Fish were infected by an intraperitoneal (i.p.), immersion or cohabitational route, and maintained at 16 degrees C. Infection trials showed that VHSV isolates were pathogenic for sole fingerlings by i.p. injection and waterborne exposure causing moderate levels of mortality (10 to 55%). In addition, the mortality observed in fish cohabitating with i.p.-infected sole confirms horizontal transmission of the virus. However, the low rates of mortality registered in this challenge suggest that there is a low dissemination of virus by the i.p.-infected sole, which results in lower secondary challenge of the cohabitating fish. External signs of disease included haemorrhaging of the ventral area and ascitic fluid in the body cavity. Dead fish were tested for VHSV by both cell culture and RT-PCR assay, using pools of kidney and spleen from 10 individuals. Virus was recovered from most of the pools composed of dead fish. The results obtained in this study not only demonstrate the susceptibility of sole to the VHSV strains employed but also indicate that wild VHSV marine isolates represent a potential risk for sole aquaculture.


Asunto(s)
Animales Salvajes , Acuicultura , Enfermedades de los Peces/virología , Peces Planos , Novirhabdovirus/patogenicidad , Infecciones por Rhabdoviridae/virología , Animales , Línea Celular
8.
J Gen Virol ; 90(Pt 12): 2940-2951, 2009 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-19710256

RESUMEN

Sequencing of the full coding region of both genomic segments of seven betanodavirus strains isolated from different farmed species in Spain and Portugal revealed that six were reassortants, exhibiting a red-spotted grouper nervous necrosis virus (RGNNV)-type RNA1 and a striped jack nervous necrosis virus (SJNNV)-type RNA2. Analysis of sequences of reassortant strains at both the genomic and protein levels revealed the existence of differences compared with type strains of both genotypes. These differences were greater in the polymerase sequence, which is remarkable because viral structural proteins generally diverge more rapidly than non-structural proteins. Changes in two amino acids observed in the SJNNV capsid protein might be involved in the colonization of new host species by these reassortant strains. In addition, a more extensive phylogenetic analysis, including partial sequences of both RNA segments of 16 other Iberian nodaviruses, confirmed the existence of reassortment between RGNNV and SJNNV.


Asunto(s)
Enfermedades de los Peces/virología , Explotaciones Pesqueras , Genoma Viral/genética , Nodaviridae , Infecciones por Virus ARN/veterinaria , Virus Reordenados , Animales , Lubina/virología , Brotes de Enfermedades , Evolución Molecular , Nodaviridae/clasificación , Nodaviridae/genética , Nodaviridae/aislamiento & purificación , Filogenia , Infecciones por Virus ARN/virología , Recombinación Genética , Dorada/virología , Análisis de Secuencia de ADN
9.
J Fish Dis ; 31(2): 135-40, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-18234021

RESUMEN

The efficacy of a vaccine against the fish pathogen Philasterides dicentrarchi was evaluated in turbot by measuring the production of specific antibodies and duration of protection. Four groups of turbot were vaccinated twice, on days 0 and 30, with phosphate-buffered saline, mineral oil adjuvant, antigen or antigen plus adjuvant. Specific serum antibodies were determined on day 0 and 1 month after the first and the second vaccinations. Protection was evaluated 1 month after the first vaccination and 1 and 5 months after the second vaccination. Serum antibody titres, measured by enzyme-linked immunosorbent assay, and protection, assessed by challenges, increased significantly 1 month after the second vaccination in the group injected with antigen plus adjuvant and the protection lasted for at least a further 5 months in this group. The relative protection was 77% and 66% 1 and 5 months after the second vaccination, respectively. Administration of antigen or adjuvant separately had no effect on antibody response or protection. The results indicate that emulsion containing antigen plus adjuvant induced durable protection against P. dicentrarchi after the administration of the two vaccinations, and that this preparation can be used as a vaccine against the pathogen.


Asunto(s)
Infecciones por Cilióforos/veterinaria , Enfermedades de los Peces/prevención & control , Peces Planos/inmunología , Oligohimenóforos/inmunología , Vacunación/veterinaria , Animales , Anticuerpos Antiprotozoarios/sangre , Antígenos de Protozoos/administración & dosificación , Antígenos de Protozoos/inmunología , Peso Corporal , Infecciones por Cilióforos/inmunología , Infecciones por Cilióforos/mortalidad , Infecciones por Cilióforos/prevención & control , Enfermedades de los Peces/inmunología , Enfermedades de los Peces/mortalidad , Peces Planos/parasitología , Oligohimenóforos/crecimiento & desarrollo , Factores de Tiempo
10.
J Fish Dis ; 30(5): 303-12, 2007 May.
Artículo en Inglés | MEDLINE | ID: mdl-17501740

RESUMEN

The susceptibility of turbot, Psetta maxima, to infection with two strains of viral haemorrhagic septicaemia virus (VHSV) obtained from wild Greenland halibut, Reinhardtius hippoglossoides, and from farmed turbot was examined. A marine VHSV strain known to be highly pathogenic for turbot was also utilized for comparative purposes. Fish were infected by intra-peritoneal (i.p.), immersion or cohabitation, and maintained at two different temperatures (8 and 15 degrees C). Infection trials showed that the three VHSV isolates were pathogenic for turbot fingerlings by i.p. injection at both temperatures, with high levels of mortality. Virus was recovered from most pools of dead fish i.p. challenged, but not from surviving fish. Although clinical signs were not induced following waterborne exposure, viral growth was obtained from some pools of surviving fish challenged by immersion with strain GH40 from Greenland halibut, which indicates that the virus can survive in sea water and infect other fish via horizontal transmission. Furthermore, although low, the clinical signs and mortality observed in fish cohabitating with turbot challenged with strain GH40 confirms horizontal transmission and indicates that the passage through fish increases the virulence of this strain for turbot. These findings indicate that Greenland halibut, as other wild fish, may play an important role in the epizootiology of VHSV and suggest a potential risk for the turbot farming industry.


Asunto(s)
Peces Planos , Septicemia Hemorrágica Viral/virología , Novirhabdovirus/patogenicidad , Animales , Explotaciones Pesqueras , Septicemia Hemorrágica Viral/mortalidad , Septicemia Hemorrágica Viral/patología , Novirhabdovirus/aislamiento & purificación , Reacción en Cadena de la Polimerasa , Agua de Mar/virología , Temperatura , Factores de Tiempo
11.
J Fish Dis ; 30(4): 225-32, 2007 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-17394524

RESUMEN

Betanodaviruses are the causative agents of viral nervous necrosis (VNN) or viral encephalopathy and retinopathy (VER) in cultured marine fish. Based on the RNA2 gene fish nodaviruses have been traditionally classified into four different genotypes and recently a fifth genotype has been proposed. This study presents sequencing data of 24 new nodaviruses obtained from three different fish species: sea bass, Dicentrarchux labrax (L.), sea bream, Sparus aurata L., and Senegalese sole, Solea senegalensis Kaup, cultured in the Iberian Peninsula (Spain and Portugal). Sequence analysis was performed on the T4 region (388 nt) of the coat protein gene. In addition, phylogenetic analysis, according to maximum parsimony and neighbour-joining methods, was performed using these sequences and other nucleotide sequences available in the databases or in the literature. Results obtained indicate that all these new nodaviruses should be classified into the striped jack nervous necrosis virus (SJNNV) genotype. This finding suggests that SJNNV genotype is emerging in the Iberian Peninsula and could easily spread throughout the Mediterranean, representing a serious threat to the fish farming industry.


Asunto(s)
Proteínas de la Cápside/genética , Enfermedades de los Peces/virología , Nodaviridae/genética , Infecciones por Virus ARN/veterinaria , Animales , Secuencia de Bases/genética , Explotaciones Pesqueras , Genotipo , Datos de Secuencia Molecular , Nodaviridae/aislamiento & purificación , Nodaviridae/patogenicidad , Filogenia , Reacción en Cadena de la Polimerasa , Portugal , Infecciones por Virus ARN/virología , Homología de Secuencia de Ácido Nucleico , España
14.
J Fish Dis ; 29(9): 541-7, 2006 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-16948704

RESUMEN

The biochemical, serological and molecular characteristics of a group of 21 Edwardsiella tarda strains isolated from turbot, Psetta maxima, in two different areas of Europe were analysed and compared with a total of 13 strains of this bacterial species with different geographical and host origins. All the turbot isolates were biochemically identical to the E. tarda strains included as reference. The use of different techniques including microagglutination, dot blot and Western blot of lipopolysaccharides allowed us to determine that all the turbot isolates constitute an homogeneous and distinctive serological group. Genetic analysis by randomly amplified polymorphic DNA (RAPD) analysis demonstrated that although the E. tarda strains from turbot were compiled in a unique group using the primers P3 and P6, two clonal lineages could be detected when oligonucleotides P4 and P5 were employed.


Asunto(s)
Edwardsiella tarda/clasificación , Infecciones por Enterobacteriaceae/veterinaria , Enfermedades de los Peces/microbiología , Peces Planos , Pruebas de Aglutinación , Animales , Anticuerpos Antibacterianos/sangre , Anticuerpos Antibacterianos/inmunología , Técnicas Bacteriológicas/métodos , Western Blotting , Dermatoglifia del ADN/métodos , Edwardsiella tarda/genética , Edwardsiella tarda/aislamiento & purificación , Infecciones por Enterobacteriaceae/microbiología , Immunoblotting/métodos , Lipopolisacáridos/inmunología , Antígenos O/inmunología , Técnica del ADN Polimorfo Amplificado Aleatorio/métodos
15.
J Virol Methods ; 133(2): 167-74, 2006 May.
Artículo en Inglés | MEDLINE | ID: mdl-16332395

RESUMEN

A non-lethal diagnostic procedure based on polymerase chain reaction (PCR) technology was developed to detect viral haemorrhagic septicaemia virus (VHSV). Sensitivity of the assay was tested using purified viral RNA and seeded tissues. Detection limits of the reverse transcriptase-polymerase chain reaction (RT-PCR) assay were estimated to be 10 fg of purified RNA and 0.97 x 10(3) or 10(0) TCID(50)/g of seeded tissue, depending on the experimental approach employed (viral adsorption allowed for 1 or 24h). Addition of nested PCR increased sensitivity up to 100-fold when cDNA excised from the agarose gel was used as template. Both, RT-PCR and nested RT-PCR, as well as Southern blot were applied to RNA extracted from blood of experimentally infected brown trout and the results were compared with those obtained by applying the same techniques to tissues and also with those of conventional viral isolation in cell culture. The superiority of the nested RT-PCR applied to blood samples has been clearly demonstrated in terms of sensitivity, obtaining positive results in 85% of fish tested, as against 40% obtained by RT-PCR and Southern blot, and only 5% viral isolations in cell culture. This procedure could turn into an important tool for screening of wild stocks as well as valuable individuals in commercial fish farms, since it makes to kill the fish unnecessary.


Asunto(s)
Enfermedades de los Peces/diagnóstico , Novirhabdovirus/aislamiento & purificación , Reacción en Cadena de la Polimerasa/veterinaria , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/veterinaria , Infecciones por Rhabdoviridae/veterinaria , Animales , Southern Blotting , Células Cultivadas , Efecto Citopatogénico Viral , Células Epiteliales/citología , Células Epiteliales/virología , Estudios de Evaluación como Asunto , Enfermedades de los Peces/virología , Leucocitos/virología , Novirhabdovirus/genética , ARN Viral/sangre , ARN Viral/genética , ARN Viral/aislamiento & purificación , Infecciones por Rhabdoviridae/diagnóstico , Sensibilidad y Especificidad , Trucha/virología
16.
J Fish Dis ; 28(4): 221-8, 2005 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-15813864

RESUMEN

Two viruses were isolated from cultured sole, Solea senegalensis, and wild blackspot sea bream, Pagellus bogaraveo, and preliminarily characterized as lymphocystis disease viruses (LCDVs). Viral isolates were characterized by morphological, biochemical and biophysical properties. In addition, the susceptibility of four fish cell lines was also tested. LCDV isolates developed cytopathic effects on the SAF-1 cell line at 5 and 6 days post-infection and reached titres of 10(6) TCID50 mL(-1). The antigenic and structural protein analysis of the two new LCDV isolates showed identical profiles to that obtained for LCDV strain Leetown NFH (ATCC VR-342), used as a reference viral strain, and for an LCDV isolate collected from gilt-head sea bream, Sparus aurata, cultured in southern Spain. Molecular confirmation was performed by polymerase chain reaction. Specific primers for LCDV produced a 270-bp DNA fragment, the expected size for LCDV.


Asunto(s)
Infecciones por Virus ADN/veterinaria , Enfermedades de los Peces/virología , Peces Planos , Iridoviridae/aislamiento & purificación , Perciformes , Animales , Anticuerpos Antivirales/aislamiento & purificación , Western Blotting , Línea Celular , Cartilla de ADN , Susceptibilidad a Enfermedades/veterinaria , Susceptibilidad a Enfermedades/virología , Electroforesis en Gel de Poliacrilamida , Reacción en Cadena de la Polimerasa , Especificidad de la Especie , Proteínas Virales/aislamiento & purificación
17.
Water Sci Technol ; 50(1): 131-6, 2004.
Artículo en Inglés | MEDLINE | ID: mdl-15318498

RESUMEN

In the present study, the efficiency of several primer sets for the RT-PCR detection of hepatitis A virus (HAV) and astrovirus from both crude viral extracts and experimentally infected shellfish tissues was evaluated. Differences were observed depending on the primer set employed in the sensitivity of amplification of both viral types. For HAV primers, HAV240/HAV68 yielded the higher sensitivity: showing a detection limit of 0.02-0.1 infectious particles/microL or mg of tissue (either crude extracts or seeded mussel tissues). Regarding detection of AsV, a better performance was observed with primer set A1/A2 achieving a sensitivity of 0.1-1 PFU/microL or mg of tissue. The results obtained in this work strongly indicated that selection of primer sets to be employed for the routine detection of enteric viruses was a critical point in the design of the RT-PCR protocols.


Asunto(s)
Astroviridae/genética , Bivalvos/virología , Contaminación de Alimentos , Hepatitis A/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/métodos , Animales , Cartilla de ADN
18.
Appl Environ Microbiol ; 70(2): 1059-67, 2004 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-14766589

RESUMEN

Reference strains of infectious pancreatic necrosis virus resembling the 10 recognized serotypes and local isolates of aquabirnaviruses isolated in northwestern Spain from reservoirs (mollusks) and from asymptomatic and carrier cultured fish were genotyped by restriction fragment length polymorphism (RFLP) and nucleic acid sequence analyses. The RFLP analysis yielded seven genogroups, each of which was clearly correlated with a serotype. Sequence analysis of the three open reading frames provided quite similar results in terms of genogrouping. Based on the results of this study and in order to unify the two types of assays, we propose placing aquabirnaviruses into six genogroups, four of which can be subdivided into two genotypes based on a two-step restriction analysis. The genotyping corresponds with serotyping as follows: genogroup I includes two genotypes corresponding to serotypes A9 (genotype I.1) and A1 (genotype I.2); genogroup II corresponds to serotype A3; genogroup III includes genotypes III.1 (serotype A2) and III.2 (serotype B1); genogroups IV and V include two genotypes, each corresponding to serotypes A5, A6, A7, and A8 (genotypes IV.1, IV.2, V.1, and V.2, respectively);and genogroup VI corresponds to serotype A4. As expected, most local isolates belonged to genotype III.1 and genogroup II. However, a few local isolates corresponded to the American types of genogroup I. Finally, based on the results of this study and due to its simplicity, the two-step restriction analysis assay is proposed as a method for typing new isolates of aquabirnaviruses, and the results correspond to the results of conventional serotyping.


Asunto(s)
Aquabirnavirus/clasificación , Infecciones por Birnaviridae/veterinaria , Virus de la Necrosis Pancreática Infecciosa/clasificación , Polimorfismo de Longitud del Fragmento de Restricción , Análisis de Secuencia de ADN , Animales , Aquabirnavirus/genética , Aquabirnavirus/aislamiento & purificación , Infecciones por Birnaviridae/virología , Células Cultivadas , Enfermedades de los Peces/virología , Peces Planos/virología , Genoma Viral , Genotipo , Virus de la Necrosis Pancreática Infecciosa/genética , Virus de la Necrosis Pancreática Infecciosa/aislamiento & purificación , Datos de Secuencia Molecular , Moluscos/virología , Oncorhynchus mykiss/virología , Salmo salar/virología , Serotipificación , España
19.
Dis Aquat Organ ; 50(3): 171-9, 2002 Jul 29.
Artículo en Inglés | MEDLINE | ID: mdl-12219973

RESUMEN

Viral hemorrhagic septicemia virus (VHSV) was isolated from apparently healthy Greenland halibut Reinhardtius hippoglossoides caught in the Flemish Cap, a deep fishing ground in the North Atlantic Ocean in international waters near Newfoundland. The identity of the virus was confirmed by electron microscopy, immunodot, seroneutralization and reverse transcriptasepolymerase chain reaction. In the serology assays, all isolates reacted in the immunodot assay with a polyclonal antiserum against the European VHSV Type Strain F1, and were neutralized by the same antiserum, although most of the strains showed low or moderate neutralization titers. None of the isolates were detected by immunofluorescence using a specific monoclonal antibody against a nucleocapsid-related protein of VHSV F1. This is the first report of VHSV isolated from wild Greenland halibut, which represents a new host species for the virus, and it is also the first evidence of VHSV in a location close to the Atlantic coast of North America. This isolation indicates that VHSV is more widely distributed than has been thought, and appears to support a marine origin of this virus.


Asunto(s)
Enfermedades de los Peces/virología , Lenguado , Novirhabdovirus/aislamiento & purificación , Infecciones por Rhabdoviridae/veterinaria , Animales , Especificidad de Anticuerpos , Océano Atlántico , Línea Celular , Enfermedades de los Peces/epidemiología , Explotaciones Pesqueras , Técnica del Anticuerpo Fluorescente Indirecta/veterinaria , Microscopía Electrónica/veterinaria , Pruebas de Neutralización/veterinaria , Terranova y Labrador/epidemiología , Novirhabdovirus/clasificación , Novirhabdovirus/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/veterinaria , Infecciones por Rhabdoviridae/epidemiología , Infecciones por Rhabdoviridae/virología
20.
Int J Food Microbiol ; 74(1-2): 119-30, 2002 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-11929166

RESUMEN

A study of the presence of hepatitis A virus (HAV) and enterovirus (EV) in shellfish from the northwestern coast of Spain, one of the most important mussel producers in the world, was carried out employing dot-blot hybridization and RT-PCR techniques. In addition, bacterial contamination of the samples was evaluated by Escherichia coli (EC) counts, according to the European Union (EU) standards of shellfish microbiological quality. Shellfish samples included raft-cultured and wild mussels, as well as wild clams and cockles. Bacterial counts showed that the majority of samples (40.8%) could be classified as moderately polluted following the EU standards, and therefore should undergo depuration processes. However, differences in bacterial contamination were observed between cultured mussel and wild shellfish. Thus, percentage of clean samples (<230 EC/100 g shellfish) was clearly higher in cultured mussels (49.1%) than in wild mussels (22.8%) or clams and cockles (10.7%). HAV was detected in 27.4% and EV in 43.9% of the samples that were analyzed. Simultaneous detection of both viral types occurred in 14.1% of the samples. Statistical tests of dependence (chi-square test) showed no relationship either between viral and bacterial contamination, or between the presence of HAV and EV. Comparative analysis of hybridization and RT-PCR for viral detection yielded different results depending on the virus type that was studied, RT-PCR being effective for HAV but not for EV detection. The obtained results reinforce once again the inadequacy of bacteriological standards to assess viral contamination and suggest that although virological analysis of shellfish is possible by molecular techniques, interlaboratory standardization and validation studies are needed before the routine use in monitoring shellfish microbiological safety.


Asunto(s)
Enterovirus/aislamiento & purificación , Virus de la Hepatitis A/aislamiento & purificación , Moluscos/virología , Mariscos/microbiología , Mariscos/normas , Animales , Recuento de Colonia Microbiana , Seguridad de Productos para el Consumidor , Enterovirus/genética , Unión Europea , Microbiología de Alimentos , Virus de la Hepatitis A/genética , Immunoblotting/métodos , Moluscos/microbiología , Prevalencia , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Mariscos/virología , España
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