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1.
J Hosp Infect ; 99(4): 461-468, 2018 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-29408207

RESUMEN

BACKGROUND: Whereas Clostridium difficile has been extensively studied in acute care facilities (ACFs), there is limited information about long-term care facilities (LTCFs), despite the high occurrence of putative risk factors (e.g. age, antimicrobial use, healthcare system contact). AIM: To evaluate C. difficile colonization in elderly patients and residents from one ACF and its associated LTCF. METHODS: Stool swabs were collected from 884 LTCF and elderly (>65 years) hospital patients. Selective culture, polymerase chain reaction ribotyping and toxin gene characterization were performed. FINDINGS: C. difficile was isolated from 92/410 (22.4%) ACF and 89/474 (18.8%) LTCF samples. Ribotypes 027 (35%) and 020 (10.4%) predominated in the LTCF whereas ribotypes AI-82/1 (20.7%) and ribotype O (14.1%) predominated at the ACF (P = 0.031). In the LTCF, C. difficile colonization was associated with a history of proton pump inhibitor (PPI) use, and the interaction terms of male residents with prior medical leave of absence, and a prior history of C. difficile infection (CDI) combined with fluoroquinolone use. In the ACF, C. difficile colonization was associated with length of stay, feeding through a tube, antibiotic use, immunosuppressive therapy and VRE colonization, as well as the interaction terms for cephalosporin and fluoroquinolone use, prior CDI and cephalosporin use, and prior CDI and fluoroquinolone use. CONCLUSION: C. difficile colonization by ACF and LTCF residents was common, despite a low apparent incidence of CDI. The association with PPI provides further evidence of the potential importance of this widely used drug class in C. difficile colonization. Wide genetic diversity was present, highlighting the likelihood of multiple unidentified routes of C. difficile acquisition.


Asunto(s)
Portador Sano/epidemiología , Clostridioides difficile/aislamiento & purificación , Infecciones por Clostridium/epidemiología , Instituciones de Salud , Anciano , Anciano de 80 o más Años , Toxinas Bacterianas/genética , Portador Sano/microbiología , Clostridioides difficile/clasificación , Clostridioides difficile/genética , Infecciones por Clostridium/microbiología , Estudios Transversales , Heces/microbiología , Femenino , Humanos , Incidencia , Cuidados a Largo Plazo , Masculino , Persona de Mediana Edad , Ontario/epidemiología , Reacción en Cadena de la Polimerasa , Ribotipificación , Factores de Riesgo
2.
Epidemiol Infect ; 146(1): 46-57, 2018 01.
Artículo en Inglés | MEDLINE | ID: mdl-29229015

RESUMEN

We examined risk factors associated with the intestinal acquisition of antimicrobial-resistant extraintestinal pathogenic Escherichia coli (ExPEC) and development of community-acquired urinary tract infection (UTI) in a case-control study of young women across Canada. A total of 399 women were recruited; 164 women had a UTI caused by E. coli resistant to ⩾1 antimicrobial classes and 98 had a UTI caused by E. coli resistant to ⩾3 antimicrobial classes. After adjustment for age, student health service (region of Canada) and either prior antibiotic use or UTI history, consumption of processed or ground chicken, cooked or raw shellfish, street foods and any organic fruit; as well as, contact with chickens, dogs and pet treats; and travel to Asia, were associated with an increased risk of UTI caused by antimicrobial resistant E. coli. A decreased risk of antimicrobial resistant UTI was associated with consumption of apples, nectarines, peppers, fresh herbs, peanuts and cooked beef. Drug-resistant UTI linked to foodborne and environmental exposures may be a significant public health concern and understanding the risk factors for intestinal acquisition of existing or newly emerging lineages of drug-resistant ExPEC is important for epidemiology, antimicrobial stewardship and prevention efforts.


Asunto(s)
Farmacorresistencia Bacteriana Múltiple , Escherichia coli Enteropatógena/fisiología , Infecciones por Escherichia coli/epidemiología , Infecciones Urinarias/epidemiología , Adulto , Animales , Canadá/epidemiología , Estudios de Casos y Controles , Infecciones Comunitarias Adquiridas/epidemiología , Infecciones Comunitarias Adquiridas/microbiología , Escherichia coli Enteropatógena/efectos de los fármacos , Infecciones por Escherichia coli/microbiología , Femenino , Humanos , Incidencia , Persona de Mediana Edad , Aves de Corral , Productos Avícolas , Factores de Riesgo , Infecciones Urinarias/microbiología , Adulto Joven
3.
Zoonoses Public Health ; 63(4): 303-10, 2016 06.
Artículo en Inglés | MEDLINE | ID: mdl-26404182

RESUMEN

Raccoons are common in urban and rural environments and can carry a wide range of bacteria, including Salmonella, that can negatively affect human and livestock health. Although previous studies have reported that raccoons shed a variety of Salmonella serovars in their faeces, it is unknown whether Salmonella is carried on raccoon paws. Our objective was to compare the prevalence of Salmonella on the paws and in the faeces of raccoons in south-western Ontario. Raccoons were sampled in a repeat cross-sectional study on five swine farms and five conservation areas from May to October 2012. A total of 416 paired faecal and paw samples were collected from 285 individual raccoons. Salmonella was detected in 18% (75/416; 95% CI, 14-22%) and 27% (111/416; 95% CI, 22-31%) of paw and faecal samples, respectively. Salmonella was detected only on paws in 8% (35/416; 95% CI, 5.9-11.5%), only in faeces in 17% (71/416; 95% CI, 13.6-21.0%) and on both paws and in faeces in 10% (40/416; 95% CI, 7.0-12.9%) of raccoon captures. Multilevel logistic regression models were used to examine associations between the presence of Salmonella and age (adult, juvenile), sex (male, female), location type (swine farm, conservation area), sample type (faeces, paw) and season (May-July and August-October). Random intercepts were included to account for clustering by individual animal and location. Significant differences, that varied by sample type and season, were noted in the prevalence of Salmonella carriage between sexes. Raccoons can carry Salmonella serovars known to infect humans and livestock on their paws and/or in their faeces and therefore have the potential to mechanically and biologically disseminate Salmonella among livestock facilities and human recreational areas.


Asunto(s)
Heces/microbiología , Pie/microbiología , Mapaches/microbiología , Salmonelosis Animal/microbiología , Salmonella/aislamiento & purificación , Animales , Animales Salvajes , Femenino , Masculino , Ontario/epidemiología , Salmonelosis Animal/epidemiología
4.
Vet Pathol ; 51(2): 328-40, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24318976

RESUMEN

This article reviews the roles that laterally transferred genes (LTG) play in the virulence of bacterial pathogens. The features of LTG that allow them to be recognized in bacterial genomes are described, and the mechanisms by which LTG are transferred between and within bacteria are reviewed. Genes on plasmids, integrative and conjugative elements, prophages, and pathogenicity islands are highlighted. Virulence genes that are frequently laterally transferred include genes for bacterial adherence to host cells, type 3 secretion systems, toxins, iron acquisition, and antimicrobial resistance. The specific roles of LTG in pathogenesis are illustrated by specific reference to Escherichia coli, Salmonella, pyogenic streptococci, and Clostridium perfringens.


Asunto(s)
Enfermedades de los Animales/patología , Bacterias/genética , Infecciones Bacterianas/patología , ADN Bacteriano/genética , Transferencia de Gen Horizontal , Enfermedades de los Animales/microbiología , Animales , Bacterias/patogenicidad , Adhesión Bacteriana/genética , Infecciones Bacterianas/microbiología , Sistemas de Secreción Bacterianos/genética , Toxinas Bacterianas , Clostridium perfringens/genética , Clostridium perfringens/patogenicidad , Farmacorresistencia Microbiana/genética , Escherichia coli/genética , Escherichia coli/patogenicidad , Secuencias Repetitivas Esparcidas/genética , Hierro/metabolismo , Plásmidos/genética , Salmonella/genética , Salmonella/patogenicidad , Streptococcus/genética , Streptococcus/patogenicidad , Virulencia , Factores de Virulencia/genética
5.
Epidemiol Infect ; 141(12): 2536-46, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-23472612

RESUMEN

A population-based study investigated the burden of illness, including the duration of illness associated with laboratory-confirmed cases of campylobacteriosis in two health unit areas. Questionnaire data were collected for 250 cases. The median duration of illness was 8 days and 66% of cases reported symptoms of moderate severity or greater. A Cox proportional hazards model identified antimicrobial use factors associated with a significantly increased rate of symptom resolution (shorter duration of illness): macrolides for less than the recommended number of days, ciprofloxacin for at least 3 days, and antimicrobials not recommended for campylobacteriosis. The impact of antimicrobial use was consistent regardless of when, during the course of illness, the antimicrobial use began. The effectiveness of ciprofloxacin in these results may be due to the low prevalence of resistance to ciprofloxacin in isolates from this study. The effect of antimicrobials not recommended for campylobacteriosis should be further investigated.


Asunto(s)
Antibacterianos/uso terapéutico , Infecciones por Campylobacter/tratamiento farmacológico , Infecciones por Campylobacter/epidemiología , Costo de Enfermedad , Adolescente , Adulto , Niño , Preescolar , Femenino , Humanos , Masculino , Persona de Mediana Edad , Modelos Estadísticos , Encuestas y Cuestionarios , Factores de Tiempo , Adulto Joven
6.
J Bacteriol ; 195(6): 1152-66, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23292780

RESUMEN

Necrotic enteritis (NE) is an economically important disease of poultry caused by certain Clostridium perfringens type A strains. NE pathogenesis involves the NetB toxin, which is encoded on a large conjugative plasmid within a 42-kb pathogenicity locus. Recent multilocus sequence type (MLST) studies have identified two predominant NE-associated clonal groups, suggesting that host genes are also involved in NE pathogenesis. We used microarray comparative genomic hybridization (CGH) to assess the gene content of 54 poultry isolates from birds that were healthy or that suffered from NE. A total of 400 genes were variably present among the poultry isolates and nine nonpoultry strains, many of which had putative functions related to nutrient uptake and metabolism and cell wall and capsule biosynthesis. The variable genes were organized into 142 genomic regions, 49 of which contained genes significantly associated with netB-positive isolates. These regions included three previously identified NE-associated loci as well as several apparent fitness-related loci, such as a carbohydrate ABC transporter, a ferric-iron siderophore uptake system, and an adhesion locus. Additional loci were related to plasmid maintenance. Cluster analysis of the CGH data grouped all of the netB-positive poultry isolates into two major groups, separated according to two prevalent clonal groups based on MLST analysis. This study identifies chromosomal loci associated with netB-positive poultry strains, suggesting that the chromosomal background can confer a selective advantage to NE-causing strains, possibly through mechanisms involving iron acquisition, carbohydrate metabolism, and plasmid maintenance.


Asunto(s)
Toxinas Bacterianas/genética , Pollos/microbiología , Infecciones por Clostridium/veterinaria , Clostridium perfringens/genética , Enterotoxinas/genética , Plásmidos , Enfermedades de las Aves de Corral/microbiología , Animales , Técnicas de Tipificación Bacteriana , Mapeo Cromosómico , Cromosomas Bacterianos/genética , Infecciones por Clostridium/microbiología , Clostridium perfringens/aislamiento & purificación , Clostridium perfringens/patogenicidad , Hibridación Genómica Comparativa , ADN Bacteriano/genética , Análisis de Secuencia de ADN
7.
Appl Environ Microbiol ; 77(5): 1900-3, 2011 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-21239555

RESUMEN

Multidrug resistance to streptomycin, sulfonamide, and tetracycline (AMR-SSuT) was identified in 156 of 171 isolates of Escherichia coli O157:H7 of phage types 23, 45, and 67. In 154 AMR-SSuT isolates, resistance was encoded by strA, strB, sul2, and tet(B), which in 59 of 63 tested isolates were found clustered together on the chromosome within the cdiA locus.


Asunto(s)
Farmacorresistencia Bacteriana Múltiple , Escherichia coli O157/efectos de los fármacos , Escherichia coli O157/genética , Familia de Multigenes , Estreptomicina/farmacología , Sulfonamidas/farmacología , Tetraciclina/farmacología , Tipificación de Bacteriófagos , ADN Bacteriano/química , ADN Bacteriano/genética , Escherichia coli O157/clasificación , Genes Bacterianos , Datos de Secuencia Molecular , Análisis de Secuencia de ADN
8.
Zoonoses Public Health ; 58(2): 102-9, 2011 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-20042064

RESUMEN

The present study was undertaken to determine the occurrence, distribution and antimicrobial resistance profiles of Salmonella serovars in slaughter beef cattle, slaughterhouse environment and personnel engaged in flaying and evisceration during slaughtering process. A total of 800 samples (each sample type, n = 100) consisting of swabs from hides, slaughterhouse personnel hands at flaying and evisceration, rumen and caecal contents, mesenteric lymph nodes, carcasses and holding pens were collected. Of the total 100 beef cattle examined, 14% were Salmonella positive in caecal content and/or mesenteric lymph nodes. Of the various samples analysed, Salmonella was detected in 31% of hides, 19% of rumen contents, 8% of mesenteric lymph nodes, 6% of caecal contents, 2% of carcass swabs, 9% of palm swabs taken from the hands of personnel in the slaughterhouse during flaying (7%) and evisceration (2%), and in 12% of holding pen swabs. The Salmonella isolates (n = 87) belonged to eight different serovars of which S. Anatum (n = 54) and S. Newport (19) were the major serovars and both serovars were detected in all sample sources except in carcass swabs. Eighteen of the 87 (20.7%) Salmonella serovars consisting of Newport (n = 14), Anatum (n = 3) and Eastbourne (n = 1) were resistant to one or more antimicrobials. Among the antimicrobial resistant Salmonella serovars, S. Newport was multidrug resistant (15.6%) and exhibited resistance to streptomycin, sulphisoxazole and tetracycline.


Asunto(s)
Mataderos , Bovinos/microbiología , Farmacorresistencia Bacteriana , Microbiología Ambiental , Salmonella , Animales , Antibacterianos/farmacología , Recuento de Colonia Microbiana , Seguridad de Productos para el Consumidor , Etiopía/epidemiología , Microbiología de Alimentos , Humanos , Pruebas de Sensibilidad Microbiana , Salmonella/clasificación , Salmonella/efectos de los fármacos , Salmonella/aislamiento & purificación , Salmonelosis Animal/tratamiento farmacológico , Salmonelosis Animal/epidemiología , Salmonelosis Animal/microbiología , Salmonelosis Animal/transmisión , Serotipificación , Recursos Humanos , Zoonosis
9.
J Clin Microbiol ; 46(12): 3957-64, 2008 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-18945840

RESUMEN

Clostridium perfringens is an important pathogen of animals and humans and is the causative agent of necrotic enteritis (NE) in poultry. This study focuses on the typing of intestinal C. perfringens isolates (n = 61) from outbreaks of NE collected from several areas of Southern Ontario, using a recently developed multilocus sequence typing (MLST) technique. For comparison, C. perfringens isolates from healthy birds were also obtained and typed. An additional locus, the pfoS locus, was included in our analysis, in an attempt to increase the discriminatory ability of the method previously published. Birds were collected from two major poultry processors in Canada, and isolates from processor 2 formed a distinct MLST cluster. Isolates from healthy birds also collected from the outbreak flocks clustered together with isolates from the birds with NE. Although isolates from eight outbreaks clustered together, MLST types were also occasionally different between outbreaks. Strong linkage disequilibrium was observed between loci, suggesting a clonal C. perfringens population structure. Detection assays for toxin genes cpb2 (beta-2 toxin), tpeL, and the newly described netB (NetB toxin) were also performed. netB was almost always found in outbreak isolates, whereas cpb2 was found exclusively in healthy bird isolates. The toxin gene tpeL, which has not been previously identified in C. perfringens type A strains, was also found, but only in the presence of netB. Resistance to bacitracin was found in 34% of isolates from antimicrobial agent-free birds and in 100% of isolates from conventionally raised birds.


Asunto(s)
Técnicas de Tipificación Bacteriana/métodos , Infecciones por Clostridium/veterinaria , Clostridium perfringens/clasificación , Clostridium perfringens/genética , Brotes de Enfermedades , Enteritis/veterinaria , Enfermedades de las Aves de Corral/microbiología , Animales , Antibacterianos/farmacología , Bacitracina/farmacología , Toxinas Bacterianas/genética , Aves , Pollos , Infecciones por Clostridium/epidemiología , Infecciones por Clostridium/microbiología , Clostridium perfringens/aislamiento & purificación , Análisis por Conglomerados , Dermatoglifia del ADN/métodos , ADN Bacteriano/química , ADN Bacteriano/genética , Farmacorresistencia Bacteriana , Enteritis/epidemiología , Enteritis/microbiología , Genotipo , Ontario/epidemiología , Enfermedades de las Aves de Corral/epidemiología , Análisis de Secuencia de ADN , Factores de Virulencia/genética
10.
Zoonoses Public Health ; 55(8-10): 470-80, 2008 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-18811908

RESUMEN

Dogs that participate in animal-assisted interventions (AAIs), often called 'therapy dogs', commonly interact with humans whose immune systems are not functioning optimally. The advisability of feeding raw meat (including poultry) to these animals remains a highly contentious issue, in spite of increasing evidence that raw meat is frequently contaminated with Salmonella. We set out to determine if consuming raw meat influences the risk of therapy dogs shedding Salmonella and other pathogens. Two hundred healthy therapy dogs from Ontario and Alberta were enrolled. Between May 2005 and November 2006, fecal specimens were collected from each dog every 2 months for 1 year, along with a log of places visited, antimicrobial use within the home, dog health status and diet. Specimens were cultured for Salmonella, methicillin-resistant Staphylococcus aureus (MRSA), vancomycin-resistant enterococci (VRE), extended-spectrum cephalosporinase (ESC) Escherichia coli and Clostridium difficile. Forty (20%) of the dogs were reported to have been fed raw meat at some point during the year. The incidence rate of Salmonella shedding in the raw meat-fed dogs was 0.61 cases/dog-year, compared with 0.08 cases/dog-year in dogs that were not fed raw meat (P<0.001). Controlling for therapy dog group, the repeated measures, and pig ear consumption and diarrhoea in the 2 months prior to specimen submission, dogs that consumed raw meat were significantly more likely to test positive for Salmonella at least once during the year than dogs that did not eat raw meat [odds ratio (OR) 22.7; 95% confidence interval (CI) 3.1-58.8; P<0.001]. Specific Salmonella serovars were more common among dogs that consumed raw meat versus those that did not include S. Typhimurium, S. Heidelberg and S. Kentucky. Raw meat consumption was also significantly associated with shedding ESC E. coli (OR 17.2; 95% CI 9.4-32.3). No associations between C. difficile, MRSA or VRE and consumption of raw meat were detected. We recommend that dogs fed raw meat should be excluded from AAI programmes, particularly when the programmes involve interaction with humans at high risk of infection or adverse sequelae attributable to infection. Furthermore, although AAI dogs may not be representative of the general population of dogs, we also recommend that feeding of raw meat to dogs is to be avoided in homes where immunocompromised people live.


Asunto(s)
Alimentación Animal/microbiología , Contaminación de Alimentos/análisis , Huésped Inmunocomprometido , Infecciones por Salmonella/transmisión , Zoonosis , Alberta , Animales , Canadá , Enfermedades de los Perros/microbiología , Enfermedades de los Perros/transmisión , Perros , Farmacorresistencia Bacteriana , Heces/microbiología , Microbiología de Alimentos , Humanos , Casas de Salud , Oportunidad Relativa , Ontario , Salud Pública , Factores de Riesgo , Salmonella/efectos de los fármacos , Salmonella/aislamiento & purificación , Infecciones por Salmonella/epidemiología , Salmonelosis Animal/epidemiología , Salmonelosis Animal/transmisión
11.
Appl Environ Microbiol ; 74(20): 6313-9, 2008 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-18723662

RESUMEN

The putative source of hide contamination for 236 cattle in Scotland followed from the farm through to slaughter was determined using phage and verocytotoxin type data. The majority of cattle (84%) were found to have subtypes of Escherichia coli O157 on their hide that had not been found previously in any animal from the farm of origin, strongly suggesting that contamination occurred once animals had left the farm of origin. Using logistic regression analysis, several variables and factors were found to be strongly associated (P < 0.01) with cross-contamination of cattle hides at the univariate level; commercial transport to slaughter, transport with other animals, use of a crush, line automation, and increasing slaughterhouse throughput were all risk factors, while feeding hay in lairage, processing an animal earlier in a slaughter cohort, and cleaning the landing area poststunning were protective. In the multivariable model, with the slaughterhouse and the farm group included as random effects, factors associated with the cross-contamination of cattle hides were identified. Transport to the slaughterhouse by a commercial hauler had a borderline-significant association with increased odds of an animal having a cross-contaminated hide (odds ratio [OR] [95% confidence interval (CI)] = 5.7 [0.99, 33.0]; P = 0.05). At the slaughterhouse, providing hay to cattle waiting in lairage (OR [95% CI] = 0.04 [<0.01, 1.04]; P = 0.05) and cleaning the landing area (OR [95% CI] = 0.03 [<0.01, 1.15,]; P = 0.06) also had a borderline-significant association with decreased odds of an animal having a cross-contaminated hide. Although the prevalence of carcass contamination remains very low, targeted intervention at the preslaughter stage may have the potential to reduce further the risk to public health.


Asunto(s)
Infecciones por Escherichia coli/veterinaria , Escherichia coli O157/clasificación , Escherichia coli O157/aislamiento & purificación , Contaminación de Alimentos , Microbiología de Alimentos , Piel/microbiología , Mataderos , Animales , Tipificación de Bacteriófagos , Bovinos , Infecciones por Escherichia coli/etiología , Escherichia coli O157/metabolismo , Análisis de Regresión , Factores de Riesgo , Escocia , Toxinas Shiga/biosíntesis
12.
J Clin Microbiol ; 46(9): 2999-3004, 2008 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-18650360

RESUMEN

Clostridium difficile is the bacterium most commonly surmised to cause antimicrobial- and hospital-associated diarrhea in developed countries worldwide, and such infections are thought to be increasing in frequency and severity. A laboratory-based study was carried out to characterize C. difficile strains isolated from persons in Ontario, Canada, during 2004 to 2006 according to toxin type (enterotoxin A, cytotoxin B, and binary toxin [CDT]), tcdC gene characterization, ribotyping, pulsed-field gel electrophoresis, and toxinotyping. Clostridium difficile was isolated from 1,080/1,152 (94%) samples from 21 diagnostic laboratories. Isolates with toxin profiles A(+) B(+) CDT(-), A(+) B(+) CDT(+), A(-) B(+) CDT(-), and A(-) B(+) CDT(+) accounted for 63%, 34%, 2.4%, and 0.6% of isolates, respectively. Alterations in tcdC were detected in six different ribotypes, including ribotype 027. A total of 39 different ribotypes were identified, with ribotype 027/North American pulsotype 1 (NAP1), an internationally recognized outbreak strain associated with severe disease, being the second most common ribotype (19% of isolates). Transient resistance to metronidazole was identified in 19 (1.8%) isolates. While a large number of ribotypes were found, a few predominated across the province. The high prevalence and wide distribution of ribotype 027/NAP1 are disconcerting in view of the severity of disease associated with it.


Asunto(s)
Clostridioides difficile , Enterocolitis Seudomembranosa/microbiología , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Niño , Preescolar , Clostridioides difficile/genética , Farmacorresistencia Bacteriana , Enterotoxinas , Femenino , Genotipo , Humanos , Masculino , Pruebas de Sensibilidad Microbiana , Persona de Mediana Edad , Ontario , Reacción en Cadena de la Polimerasa , Ribotipificación , Adulto Joven
13.
Vet Microbiol ; 128(1-2): 126-35, 2008 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-18022331

RESUMEN

Clostridium perfringens is a well-characterized bacterial species which can be both commensal and pathogenic in humans and many animals. Genetic typing of the bacterium is often used for molecular epidemiological purposes, and can be useful for observing population structures as well. Analysis of the variable number of tandem repeats (VNTRs) within the genome, called multiple-locus VNTR analysis (MLVA) provides genetic information useful for molecular typing. A MLVA typing method has been developed recently by Sawires and Songer [Sawires, Y.S., Songer, J.G., 2005. Multiple-locus variable-number tandem repeat analysis for strain typing of Clostridium perfringens. Anaerobe 11, 262-272] for C. perfringens. A novel MLVA protocol is described here, with the aim of investigating the discriminatory potential of the method, and to obtain preliminary data on the population structure of C. perfringens from a wide variety of C. perfringens sources. This protocol uses new loci in noncoding regions of the chromosome, and also makes use of capillary electrophoresis for more precise results and for high-throughput typing. DNA sequencing of amplicons was performed to ensure inclusion of conserved tandem repeats within each locus. Fifty-four epidemiologically unrelated isolates from a local collection obtained from 11 different animal species were typed at 6 loci. Thirty-five unique MLVA types were obtained, resulting in a Simpson's index of diversity of 0.975. Epidemiologically related isolates (n=27) previously typed by pulsed-field gel electrophoresis (PFGE) were also examined with MLVA and the congruency of the two methods was found to be very high. All 81 isolates were successfully typed with MLVA, and polymerase chain reactions (PCR) were automated using robotics and 96-well plates, with PCR product sizes determined using capillary electrophoresis. Reproducibility was also shown to be very high.


Asunto(s)
Técnicas de Tipificación Bacteriana/veterinaria , Infecciones por Clostridium/veterinaria , Clostridium perfringens/clasificación , Repeticiones de Minisatélite , Alelos , Animales , Técnicas de Tipificación Bacteriana/métodos , Secuencia de Bases , Gatos , Bovinos , Pollos , Infecciones por Clostridium/microbiología , Clostridium perfringens/genética , Cartilla de ADN/química , Perros , Variación Genética , Datos de Secuencia Molecular , Reacción en Cadena de la Polimerasa/veterinaria , Alineación de Secuencia
14.
Vet Microbiol ; 127(1-2): 116-27, 2008 Feb 05.
Artículo en Inglés | MEDLINE | ID: mdl-17888591

RESUMEN

Clostridium perfringens is an important commensal and bacterial pathogen of many animal species. It has particular significance in poultry, where it may cause necrotic enteritis. Our objective was to characterize the population diversity of C. perfringens colonizing healthy birds, and to observe how diversity changed over time. Isolates were obtained from broiler chicken cecal samples in two barns on a single farm, on days 7, 14, 22, 27, 30 and 34 of a single 42-day rearing cycle. Bacitracin was used as a feed additive in one of the barns and withdrawn from the second barn for the duration of the experiment. Each isolate was typed using pulsed-field gel electrophoresis (PFGE) using SmaI restriction endonuclease. A total of 205 cecal isolates from 49 birds were typed, as well as 93 isolates from the barn environment (bedding, drinking water and feces). Eight major PFGE types and 17 subtypes were found in the 298 total isolates. The results show that an optimal sampling strategy would involve a large number of birds, with only a few isolates sampled per bird. The diversity of C. perfringens in this study appears to be low within a single bird, and increases as the bird matures. There was no significant difference in genetic diversity between the two barns. In addition, isolates from fresh fecal samples appear to represent the cecal C. perfringens population accurately, although this was not proven statistically. Antimicrobial susceptibility testing was performed on selected isolates (n=41) representing a cross-section of PFGE types. Based on minimum inhibitory concentration distributions, 95% of the isolates tested were deemed resistant to bacitracin, with a 16 microg/mL breakpoint. Three new cpb2 (beta2 toxin gene) variants were found in the study.


Asunto(s)
Pollos/microbiología , Infecciones por Clostridium/veterinaria , Clostridium perfringens/genética , Variación Genética , Enfermedades de las Aves de Corral/microbiología , Animales , Antibacterianos/farmacología , Toxinas Bacterianas/genética , Infecciones por Clostridium/microbiología , Clostridium perfringens/clasificación , Clostridium perfringens/efectos de los fármacos , Clostridium perfringens/aislamiento & purificación , Farmacorresistencia Bacteriana , Electroforesis en Gel de Campo Pulsado , Enterotoxinas/clasificación , Microbiología Ambiental , Heces/microbiología , Pruebas de Sensibilidad Microbiana , Datos de Secuencia Molecular , Filogenia , Reacción en Cadena de la Polimerasa
15.
Avian Dis ; 51(4): 834-9, 2007 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-18251390

RESUMEN

Necrotic enteritis is an enteric disease of avian species caused by the anaerobic bacterium Clostridium perfringens. The disease is regularly controlled in the broiler chicken industry with antimicrobials in feed but is reemerging in areas such as Europe where there is a ban on antimicrobials as growth promoters. To study prospective therapies, researchers must be able to reproduce this disease in a controlled environment, but this is not always possible because of differences in the pathogenicity of C. perfringens strains. Our objective was to test the potential of five isolates (SNECP43, 44, 47, 49, and 50), taken from field cases of necrotic enteritis, at recreating the disease in a controlled challenge experiment. SNECP43 and 50 were derived from a common clone, with SNECP50 passed in vivo and SNECP43 subcultured in vitro. Four hundred birds were divided into 16 pens, with three pens each receiving one of five treatments, with one control pen. Day-old birds were raised on a high wheat-based diet to promote necrotic enteritis development and were challenged with between 3.4 x 10(9) and 3.2 x 10(11) colony-forming units (cfu) of C. perfringens in feed for a period of 24 hr starting on day 13 of the challenge experiment. Lesion scores were assessed on two birds per pen sacrificed on day 17 and on any dead birds during the 25-day study. Growth performance was assessed up to 25 days, and mortality recorded throughout. Only SNECP50 produced necrotic enteritis mortalities significantly different (P < or = 0.05) from the control. The five isolates were also typed using pulsed-field gel electrophoresis to assess their genetic relatedness. All epidemiologically unrelated isolates were deemed genetically unrelated, whereas SNECP43 and 50 differed by only a single minor band. Toxin type was assessed using polymerase chain reaction (PCR), which was also used for the detection of the gene encoding the beta2-toxin.


Asunto(s)
Pollos , Clostridium perfringens/patogenicidad , Enteritis/veterinaria , Modelos Biológicos , Necrosis/veterinaria , Enfermedades de las Aves de Corral/microbiología , Animales , Peso Corporal , Clostridium perfringens/aislamiento & purificación , Brotes de Enfermedades/veterinaria , Enteritis/epidemiología , Enteritis/microbiología , Enteritis/mortalidad , Enteritis/patología , Necrosis/microbiología , Enfermedades de las Aves de Corral/epidemiología , Enfermedades de las Aves de Corral/mortalidad , Enfermedades de las Aves de Corral/patología
16.
Appl Environ Microbiol ; 71(3): 1184-92, 2005 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-15746317

RESUMEN

Salmonella enterica subsp. enterica serovar Newport resistant to the extended-spectrum cephalosporins (ESCs) and other antimicrobials causes septicemic salmonellosis in humans and animals and is increasingly isolated from humans, animals, foods, and environmental sources. Mechanisms whereby serovar Newport bacteria become resistant to ESCs and other classes of antimicrobials while inhabiting the intestinal tract are not well understood. The present study shows that 25.3% of serovar Newport strains isolated from the turkey poult intestinal tract after the animals were dosed with Escherichia coli harboring a large conjugative plasmid encoding the CMY-2 beta-lactamase and other drug resistance determinants acquired the plasmid and its associated drug resistance genes. The conjugative plasmid containing the cmy-2 gene was transferred not only from the donor E. coli to Salmonella serovar Newport but also to another E. coli serotype present in the intestinal tract. Laboratory studies showed that the plasmid could be readily transferred between serovar Newport and E. coli intestinal isolates. Administration of a single dose of ceftiofur, used to prevent septicemic colibacillosis, to 1-day-old turkeys did not result in the isolation of ceftiofur-resistant E. coli or Salmonella serovar Newport. There was a remarkable association between serotype, drug resistance, and plasmid profile among the E. coli strains isolated from the poults. This study shows that Salmonella serovar Newport can become resistant to ESCs and other antibiotics by acquiring a conjugative drug resistance plasmid from E. coli in the intestines.


Asunto(s)
Resistencia a las Cefalosporinas , Escherichia coli/efectos de los fármacos , Escherichia coli/aislamiento & purificación , Salmonella enterica/efectos de los fármacos , Salmonella enterica/aislamiento & purificación , Pavos/microbiología , Animales , Resistencia a las Cefalosporinas/genética , Cefalosporinas/farmacología , Conjugación Genética , Escherichia coli/clasificación , Escherichia coli/genética , Microbiología de Alimentos , Genes Bacterianos , Intestinos/microbiología , Plásmidos/genética , Salmonella enterica/clasificación , Salmonella enterica/genética , Serotipificación , Transformación Genética
17.
Prev Vet Med ; 61(4): 279-93, 2003 Dec 12.
Artículo en Inglés | MEDLINE | ID: mdl-14623412

RESUMEN

As a part of a research-and-action partnership between public health and veterinary medicine, the relationships between the seroprevalences of brucellosis and Q-fever in humans and livestock were evaluated in three nomadic communities of Chad (Fulani cattle breeders, and Arab camel and cattle breeders). Nomad camps were visited between April 1999 and April 2000. A total of 860 human and 1637 animal sera were tested for antibodies against Brucella spp., and 368 human and 613 animal sera for Coxiella burnetii. The same indirect ELISA was used for livestock and human sera, and the test characteristics for its use on human sera were evaluated. Twenty-eight people were seropositive for brucellosis (seroprevalence 3.8%). Brucella seroprevalence was higher in cattle (7%) than other livestock, and brucellosis seropositivity was a significant factor for abortion in cattle (OR=2.8). No correlation was found between human brucellosis serostatus and camp proportions of seropositive animals. Q-fever-seropositive blood samples were taken from 11 Arab camel and 4 Arab cattle breeders (seroprevalence 1%). Being a camel breeder was associated with Q-fever seropositivity in humans (OR=9). Camels had the highest Q-fever seroprevalence (80%) among livestock species. Although there was high-risk human behaviour for the acquisition of brucellosis and Q-fever from livestock through raw-milk consumption (98%) and contact with placentas of livestock (62%), we concluded that seroprevalences in humans were relatively low (likely due to limited active foci in livestock).


Asunto(s)
Brucelosis/epidemiología , Fiebre Q/epidemiología , Adolescente , Adulto , Animales , Anticuerpos Antibacterianos/análisis , Anticuerpos Antibacterianos/sangre , Brucella/inmunología , Brucella/aislamiento & purificación , Brucelosis/sangre , Brucelosis/etiología , Brucelosis Bovina/sangre , Brucelosis Bovina/epidemiología , Brucelosis Bovina/etiología , Camelus/microbiología , Bovinos/microbiología , Chad/epidemiología , Niño , Preescolar , Coxiella burnetii/inmunología , Coxiella burnetii/aislamiento & purificación , Ensayo de Inmunoadsorción Enzimática , Femenino , Humanos , Lactante , Recién Nacido , Masculino , Persona de Mediana Edad , Leche/microbiología , Fiebre Q/sangre , Fiebre Q/etiología , Estudios Seroepidemiológicos , Migrantes
18.
Vet Pathol ; 40(4): 376-81, 2003 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-12824509

RESUMEN

Clostridia-associated intestinal disease in horses was generally reported to be due to infection with Clostridium perfringens type A, which harbors the cpa-encoded alpha-toxin. A recent study demonstrated a high incidence of beta2-toxigenic C. perfringens in horses suffering or dying from typhlocolitis, suggesting that this novel type of C. perfringens might play an important role in typhlocolitis and possibly other equine intestinal diseases. A retrospective study was conducted to assess the presence of the beta2-toxin in tissues of the equine gastrointestinal tract. Monospecific polyclonal antibodies against recombinant beta2-toxin were produced in rabbits and used to demonstrate the beta2-toxin in sections of the gastrointestinal tract by immunohistochemical methods. Sections from 69 horses were stained and beta2-toxin was observed immunohistochemically in 40 animals. Sections from the stomach, small intestine, and large intestine were positive. Immunopositivity for beta2-toxin was significantly associated with presence of beta2-toxigenic bacteria. This investigation demonstrates local production of beta2-toxin and suggests that immunohistochemistry using antitoxin antibodies represents a useful diagnostic method in those cases where isolation of bacteria and polymerase chain reaction typing is not feasible. Although the association between the presence of beta2-toxin and development of gastrointestinal disease in horses remains uncertain, the findings of this study indicate that the potential causal relationship warrants further investigation.


Asunto(s)
Toxinas Bacterianas/aislamiento & purificación , Sistema Digestivo/microbiología , Enfermedades de los Caballos/microbiología , Animales , Clostridium perfringens/metabolismo , Femenino , Caballos , Inmunohistoquímica , Masculino
19.
Eur J Clin Microbiol Infect Dis ; 21(11): 810-3, 2002 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-12461591

RESUMEN

The present study was conducted between October 1996 and October 1998 to estimate the frequency of verocytotoxin-producing Escherichia coli among outpatients with diarrhoea in Switzerland. Among 3,041 subjects studied, 16 (0.5%) verocytotoxin-producing Escherichia coli infections were identified. Eleven cases were in infants and children

Asunto(s)
Diarrea/epidemiología , Diarrea/microbiología , Enterotoxinas/metabolismo , Infecciones por Escherichia coli/epidemiología , Escherichia coli/metabolismo , Adulto , Distribución por Edad , Anciano , Anciano de 80 o más Años , Niño , Preescolar , Estudios de Cohortes , Enterotoxinas/análisis , Escherichia coli/aislamiento & purificación , Infecciones por Escherichia coli/diagnóstico , Femenino , Humanos , Técnicas para Inmunoenzimas , Incidencia , Lactante , Masculino , Persona de Mediana Edad , Factores de Riesgo , Distribución por Sexo , Suiza/epidemiología
20.
Schweiz Arch Tierheilkd ; 144(6): 275-81, 2002 Jun.
Artículo en Alemán | MEDLINE | ID: mdl-12125238

RESUMEN

Investigations were performed on shedding of C. perfringens in sows from four different pig farms. In two farms where no outbreaks of necrotizing enteritis had been observed, no strains of C. perfringens producing beta-toxin were detected in the faeces of sows. In contrast, C. perfringens strains producing beta-toxin were detected in sows on both farms suffering outbreaks of acute necrotizing enteritis. Strains of C. perfringens producing beta-toxin were invariably positive for the beta 2-toxin gene. However, strains carrying the beta 2-toxin gene only (i.e. negative for beta-toxin) were present in animals on all farms with roughly similar frequencies (mean 28.2% carriers). Some sows carried C. perfringens strains of both toxin genotypes simultaneously. Whereas these data further support the role of betatoxin as a cause of necrotizing enteritis, the role of beta 2-toxin in intestinal disease of piglets remains unclear. To establish the role of faecal shedding vs. environmental contamination as reservoirs of C. perfringens type C, strains were isolated from teats and feedlot trough swabs (toxin genotype beta/beta 2), as well as from fodder (genotype beta 2). However, sows carried this pathogen intermittently and in small numbers. This renders an individual, reliable diagnosis of carrier sows very difficult. Ribotyping of 34 C. perfringens isolates of different toxin genotypes showed five distinct profiles. Different toxin genotypes can belong to the same ribotype, and the same toxin genotype can be present in different ribotypes. Thus, even if a majority (79.4%) of strains investigated in a limited geographic region belonged to ribotype 1, ribotyping offered discrimination of strains beyond toxin typing.


Asunto(s)
Toxinas Bacterianas/genética , Infecciones por Clostridium/veterinaria , Clostridium perfringens , Enteritis/veterinaria , Enfermedades de los Porcinos/epidemiología , Animales , Toxinas Bacterianas/biosíntesis , Infecciones por Clostridium/epidemiología , Infecciones por Clostridium/microbiología , Clostridium perfringens/genética , Clostridium perfringens/aislamiento & purificación , Clostridium perfringens/patogenicidad , Brotes de Enfermedades/prevención & control , Brotes de Enfermedades/veterinaria , Reservorios de Enfermedades/veterinaria , Enteritis/epidemiología , Enteritis/microbiología , Heces/microbiología , Femenino , Genotipo , Porcinos , Enfermedades de los Porcinos/microbiología , Suiza/epidemiología
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