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Genomics ; 109(5-6): 475-484, 2017 10.
Artículo en Inglés | MEDLINE | ID: mdl-28751185

RESUMEN

Latex yield and growth are the key complex traits in commercial rubber production. The present study is the first to report genome-wide association mapping of latex yield and girth, for 170 Amazonian accessions grown in a suboptimal area characterized by limited rainfall and a lengthy dry season. Targeted sequence enrichment to capture gene transcripts generated 14,155 high quality filtered single nucleotide polymorphisms (SNPs) of which 94.3% resided in coding regions. The rapid decay of linkage disequilibrium over physical and genetic distance found in the accessions was comparable to those previously reported for several outcrossing species. A mixed linear model detected three significant SNPs in three candidate genes involved in plant adaptation to drought stress, individually explaining 12.7-15.7% of the phenotypic variance. The SNPs identified in the study will help to extend understanding, and to support genetic improvement of rubber trees grown in drought-affected regions.


Asunto(s)
Mapeo Cromosómico/métodos , Hevea/crecimiento & desarrollo , Látex/metabolismo , Adaptación Fisiológica , Perfilación de la Expresión Génica/métodos , Genoma de Planta , Hevea/clasificación , Hevea/genética , Hevea/metabolismo , Desequilibrio de Ligamiento , Fenotipo , Polimorfismo de Nucleótido Simple , Sitios de Carácter Cuantitativo , Análisis de Secuencia de ARN/métodos
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