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1.
Cell Rep ; 43(7): 114465, 2024 Jul 09.
Artículo en Inglés | MEDLINE | ID: mdl-38985678

RESUMEN

The pituitary is the central endocrine gland with effects on metabolic dysfunction-associated steatotic liver disease (MASLD). However, it is not clear whether the pituitary responds to free fatty acid (FFA) toxicity, thus dysregulating hepatic lipid metabolism. Here, we demonstrate that decreased prolactin (PRL) levels are involved in the association between FFA and MASLD based on a liver biospecimen-based cohort. Moreover, overloaded FFAs decrease serum PRL levels, thus promoting liver steatosis in mice with both dynamic diet intervention and stereotactic pituitary FFA injection. Mechanistic studies show that excessive FFA sensing in pituitary lactotrophs inhibits the synthesis and secretion of PRL in a cell-autonomous manner. Notably, inhibiting excessive lipid uptake using pituitary stereotaxic virus injection or a specific drug delivery system effectively ameliorates hepatic lipid accumulation by improving PRL levels. Targeted inhibition of pituitary FFA sensing may be a potential therapeutic target for liver steatosis.

2.
Cureus ; 16(5): e60477, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38883031

RESUMEN

Immune-mediated necrotizing myopathy (IMNM) represents a rare category of inflammatory myopathies characterized by more severe and rapid progression of symmetrical proximal muscle weakness. It is also marked by notably elevated serum muscle enzyme levels and distinct histological features, setting it apart from other types of myositis. Moreover, acute chronic lung respiratory dysfunction is a major comorbidity of great concern. We herein present two cases of IMNM associated with anti-signal recognition particle antibodies complicated by acute respiratory distress syndrome.

3.
Transl Androl Urol ; 13(5): 812-827, 2024 May 31.
Artículo en Inglés | MEDLINE | ID: mdl-38855608

RESUMEN

Background: Solasonine has been demonstrated to exert an inhibitory effect on bladder cancer (BC), but the potential mechanisms remain unclear. Therefore, the aim of this study is to explore the association between microRNAs (miRNAs)-mediated regulation and the anti-tumor activities of solasonine in BC. Methods: MiRNA sequencing was performed to identify the differentially expressed microRNAs (DE-miRNAs) associated with solasonine in BC cells. Functional enrichment analyses of the DE-miRNAs activated and inhibited by solasonine were then conducted. The DE-miRNAs with prognostic value for BC and those differentially expressed in the BC samples were subsequently identified as the hub DE-miRNAs. After identifying the messenger RNAs (mRNAs) that were targeted by the hub DE-miRNAs and those differentially expressed in the BC samples, a protein-protein interaction analysis was performed to identify the core downstream genes, which were then used to construct a solasonine-miRNA-mRNA regulatory network. Results: A total of 27 activated and 19 inhibited solasonine-mediated DE-miRNAs were identified that were found to be associated with several tumor-related biological functions and pathways. After integrating the results of the survival analysis and expression assessment, the following nine hub DE-miRNAs were identified: hsa-miR-127-3p, hsa-miR-450b-5p, hsa-miR-99a-5p, hsa-miR-197-3p, hsa-miR-423-3p, hsa-miR-4326, hsa-miR-625-3p, hsa-miR-625-5p, and hsa-miR-92a-3p. The DE-mRNAs targeted by the hub DE-miRNAs were predicted, and 30 core downstream genes were used to construct the solasonine-miRNA-mRNA regulatory network. miR-450b-5p was shown to be associated with the most mRNAs in this network, which suggests that it plays a crucial role in the solasonine-mediated anti-BC effect. Conclusions: A regulatory network, including solasonine, miRNAs, and mRNAs related to BC, was constructed. This network provides extensive insights into the molecular regulatory mechanisms that underlie the anti-cancer efficacy of solasonine in BC.

4.
Plant Physiol Biochem ; 207: 108429, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-38359556

RESUMEN

Roots are the primary determinants of water and nutrient uptake by plants. The structure of roots is largely determined by the repeated formation of new lateral roots (LR). A new lateral root primordium (LRP) is formed between the beginning and appearance of LR, which defines the organization and function of LR. Therefore, proper LRP morphogenesis is a crucial process for lateral root formation. The development of LRP is regulated by multiple factors, including hormone and environmental signals. Roots integrate signals and regulate growth and development. At the molecular level, many genes regulate the growth and development of root organs to ensure stable development plans, while also being influenced by various environmental factors. To gain a better understanding of the LRP formation and its influencing factors, this study summarizes previous research. The cell cycle involved in LRP formation, as well as the roles of ROS, auxin, other auxin-related plant hormones, and genetic regulation, are discussed in detail. Additionally, the effects of gravity, mechanical stress, and cell death on LRP formation are explored. Throughout the text unanswered or poorly understood questions are identified to guide future research in this area.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Arabidopsis/genética , Reguladores del Crecimiento de las Plantas/metabolismo , Ácidos Indolacéticos/metabolismo , División Celular , Transporte Biológico , Raíces de Plantas/metabolismo , Regulación de la Expresión Génica de las Plantas , Proteínas de Arabidopsis/genética
5.
BMC Cardiovasc Disord ; 23(1): 376, 2023 07 28.
Artículo en Inglés | MEDLINE | ID: mdl-37507655

RESUMEN

BACKGROUND: The molecular biological mechanisms underlying heart failure (HF) remain poorly understood. Therefore, it is imperative to use innovative approaches, such as high-throughput sequencing and artificial intelligence, to investigate the pathogenesis, diagnosis, and potential treatment of HF. METHODS: First, we initially screened Two data sets (GSE3586 and GSE5406) from the GEO database containing HF and control samples from the GEO database to establish the Train group, and selected another dataset (GSE57345) to construct the Test group for verification. Next, we identified the genes with significantly different expression levels in patients with or without HF and performed functional and pathway enrichment analyses. HF-specific genes were identified, and an artificial neural network was constructed by Random Forest. The ROC curve was used to evaluate the accuracy and reliability of the constructed model in the Train and Test groups. Finally, immune cell infiltration was analyzed to determine the role of the inflammatory response and the immunological microenvironment in the pathogenesis of HF. RESULTS: In the Train group, 153 significant differentially expressed genes (DEGs) associated with HF were found to be abnormal, including 81 down-regulated genes and 72 up-regulated genes. GO and KEGG enrichment analyses revealed that the down-regulated genes were primarily enriched in organic anion transport, neutrophil activation, and the PI3K-Akt signaling pathway. The upregulated genes were mainly enriched in neutrophil activation and the calcium signaling. DEGs were identified using Random Forest, and finally, 16 HF-specific genes were obtained. In the ROC validation and evaluation, the area under the curve (AUC) of the Train and Test groups were 0.996 and 0.863, respectively. CONCLUSIONS: Our research revealed the potential functions and pathways implicated in the progression of HF, and designed an RNA diagnostic model for HF tissues using machine learning and artificial neural networks. Sensitivity, specificity, and stability were confirmed by ROC curves in the two different cohorts.


Asunto(s)
Inteligencia Artificial , Insuficiencia Cardíaca , Humanos , Fosfatidilinositol 3-Quinasas , Reproducibilidad de los Resultados , Insuficiencia Cardíaca/diagnóstico , Insuficiencia Cardíaca/genética , Área Bajo la Curva
6.
Heliyon ; 9(7): e17599, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-37449096

RESUMEN

The incidence of lung cancer has seen a significant increase in recent times, leading to a rise in fatalities. The detection of pulmonary nodules from CT images has emerged as an effective method to aid in the diagnosis of lung cancer. Ensuring information security holds utmost significance in the detection of nodules, with particular attention given to safeguarding patient privacy within the context of the Internet of Things (IoT). In this regard, migration learning emerges as a potent technique for preserving the confidentiality of patient data. Firstly, we applied several data-preprocessing steps such as lung segmentation based on K-Means, denoising methods, and lung parenchyma extraction through a dedicated medical IoT network. We used the Microsoft Common Object in Context (MS-COCO) dataset to pre-train the detection framework and fine-tuned it with the Lung Nodule Analysis 16 (LUNA16) dataset to adapt to nodule detection tasks. To evaluate the effectiveness of our proposed pipeline, we conducted extensive experiments that included subjective evaluation of detection results and quantitative data analysis. The results of these experiments demonstrated the efficacy of our approach in accurately detecting pulmonary nodules. Our study provides a promising framework for trustworthy pulmonary nodule detection on lung parenchyma images using a secured hyper-deep algorithm, which has the potential to improve lung cancer diagnosis and reduce fatalities associated with it.

7.
J Clin Endocrinol Metab ; 108(12): 3239-3249, 2023 Nov 17.
Artículo en Inglés | MEDLINE | ID: mdl-37310344

RESUMEN

CONTEXT: Although cognitive impairment in nonalcoholic fatty liver disease (NAFLD) has received attention in recent years, little is known about detailed cognitive functions in histologically diagnosed individuals. OBJECTIVE: This study aimed to investigate the association of liver pathological changes with cognitive features and further explore the underlying brain manifestations. METHODS AND PATIENTS: We performed a cross-sectional study in 320 subjects who underwent liver biopsy. Among the enrolled participants, 225 underwent assessments of global cognition and cognitive subdomains. Furthermore, 70 individuals received functional magnetic resonance imaging scans for neuroimaging evaluations. The associations among liver histological features, brain alterations, and cognitive functions were evaluated using structural equation model. RESULTS: Compared with controls, patients with NAFLD had poorer immediate memory and delayed memory. Severe liver steatosis (odds ratio, 2.189; 95% CI, 1.020-4.699) and ballooning (OR, 3.655; 95% CI, 1.419-9.414) were related to a higher proportion of memory impairment. Structural magnetic resonance imaging showed that patients with nonalcoholic steatohepatitis exhibited volume loss in left hippocampus and its subregions of subiculum and presubiculum. Task-based magnetic resonance imaging showed that patients with nonalcoholic steatohepatitis had decreased left hippocampal activation. Path analysis demonstrated that higher NAFLD activity scores were associated with lower subiculum volume and reduced hippocampal activation, and such hippocampal damage contributed to lower delayed memory scores. CONCLUSIONS: We are the first to report the presence and severity of NAFLD to be associated with an increased risk of memory impairment and hippocampal structural and functional abnormalities. These findings stress the significance of early cognitive evaluation in patients with NAFLD.


Asunto(s)
Disfunción Cognitiva , Enfermedad del Hígado Graso no Alcohólico , Humanos , Enfermedad del Hígado Graso no Alcohólico/complicaciones , Enfermedad del Hígado Graso no Alcohólico/diagnóstico por imagen , Enfermedad del Hígado Graso no Alcohólico/patología , Estudios Transversales , Disfunción Cognitiva/diagnóstico por imagen , Disfunción Cognitiva/etiología , Hipocampo/diagnóstico por imagen , Hipocampo/patología
8.
Int J Biol Macromol ; 242(Pt 1): 124791, 2023 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-37164139

RESUMEN

Cupin superfamily proteins have extensive functions. Their members are not only involved in the development of plants but also responded to various stresses. Whereas, the research on the Cupin members has not attracted enough attention. In this article, we summarized the research progress on these family genes in recent years and explored their evolution, structural characteristics, and biological functions. The significance of members of the Cupin family in the development of plant cell walls, roots, leaves, flowers, fruits, and seeds and their role in stress response are highlighted. Simultaneously, the prospective application of Cupin protein in crop enhancement was introduced. Some members can enhance plant growth, development, and resistance to adversity, thereby increasing crop yield. It will be as a foundation for future effective crop research and breeding.


Asunto(s)
Fitomejoramiento , Proteínas , Plantas/genética , Plantas/metabolismo , Semillas/metabolismo , Proteínas de Plantas/química
9.
BMJ Open ; 13(5): e067222, 2023 05 08.
Artículo en Inglés | MEDLINE | ID: mdl-37156579

RESUMEN

OBJECTIVES: Hepatectomy is the best treatment for patients with intrahepatic cholangiocarcinoma (ICC) at present, but there has been controversy about the width of surgical margins. In this study, we systematically investigated the effects of different surgical margin widths on the prognosis of patients with ICC undergoing hepatectomy. DESIGN: Systematic review and meta-analysis. DATA SOURCES: PubMed, Embase and Web of Science databases were systematically searched from inception to June 2022. ELIGIBILITY CRITERIA: Cohort studies reported in English with patients who underwent negative marginal (R0) resection were included. The effects of surgical margin width on overall survival (OS), disease-free survival (DFS) and recurrence-free survival (RFS) in patients with ICC were assessed. DATA EXTRACTION AND SYNTHESIS: Two investigators independently conducted literature screening and data extraction. Risk of bias was assessed using funnel plots and quality was assessed by the Newcastle-Ottawa Scale. Forest plots of HRs and their 95% CIs for outcome indicators were plotted. Heterogeneity was assessed and determined quantitatively using I2, and the stability of the study results was evaluated using sensitivity analysis. Analyses were performed using Stata software. RESULTS: Nine studies were included. With the wide margin group (≥10 mm) as the control, pooled HR of OS in the narrow margin group (<10 mm) was 1.54 (95% CI 1.34 to 1.77). HRs of OS in three subgroups where the margin was less than 5 mm ranged from 5 mm to 9 mm, or was less than 10 mm in length were 1.88 (1.45 to 2.42), 1.33 (1.03 to 1.72) and 1.49 (1.20 to 1.84), respectively. Pooled HR of DFS in the narrow margin group (<10 mm) was 1.51 (1.14 to 2.00). Pooled HR of RFS in the narrow margin group (<10 mm) was 1.35 (1.19 to 1.54). HRs of RFS in three subgroups where the margin was less than 5 mm ranged from 5 mm to 9 mm, or was less than 10 mm in length were 1.38 (1.07 to 1.78), 1.39 (1.11 to 1.74) and 1.30 (1.06 to 1.60), respectively. Neither lymph node lesions (HR 1.44, 95% CI 1.22 to 1.70) nor lymph node invasion (2.14, 1.39 to 3.28) was favourable for postoperative OS in patients with ICC. Lymph node metastasis (1.31, 1.09 to 1.57) was unfavourable for RFS in patients with ICC. CONCLUSION: Patients with ICC who underwent curative hepatectomy with a negative margin ≥10 mm may have a long-term survival advantage, but lymph node dissection also needs to be considered. In addition, tumour-related pathological features need to be explored to see if they affect the surgical outcome of R0 margins.


Asunto(s)
Neoplasias de los Conductos Biliares , Colangiocarcinoma , Humanos , Márgenes de Escisión , Tasa de Supervivencia , Neoplasias de los Conductos Biliares/cirugía , Neoplasias de los Conductos Biliares/patología , Colangiocarcinoma/cirugía , Colangiocarcinoma/patología , Pronóstico , Hepatectomía/métodos , Conductos Biliares Intrahepáticos/patología
10.
Physiol Plant ; 175(2): e13878, 2023 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-36808102

RESUMEN

Roots are important organs of plants. Plants rely on roots for water, nutrients, and organic salts. In the whole root system, lateral roots (LRs) account for a large proportion and are critical to the development of the plant. Many environmental factors affect LR development. Therefore, a systematic understanding of these factors can provide a theoretical basis for creating optimal growth conditions for plants. In this paper, the factors affecting LR development are systematically and comprehensively summarized, and the molecular mechanism and regulatory network of LR development are described. Changes in the external environment not only lead to hormone homeostasis in plants but also affect the composition and activity of rhizosphere microbial communities, which in turn affect plants' nitrogen and phosphorus uptake and growth dynamics. LR development is influenced by hormone levels and external environment. In particular, auxin and abscisic acid coordinate with each other to maintain normal LR development. Of course, changes in the external environment are also important for root development, and they affect the intrinsic hormone levels of plants by affecting the accumulation and transport of hormones. For example, nitrogen, phosphorus, reactive oxygen species, nitric oxide, water, drought, light, and rhizosphere microorganisms affect LR development and plant tolerance in a variety of ways, including regulating hormone levels. This review summarizes the factors affecting LR development and the regulatory network and points out the direction for future research.


Asunto(s)
Arabidopsis , Reguladores del Crecimiento de las Plantas , Reguladores del Crecimiento de las Plantas/fisiología , Raíces de Plantas , Ácidos Indolacéticos , Hormonas , Nitrógeno
11.
Diabetes Metab ; 49(2): 101397, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36283619

RESUMEN

AIM: The association of bone turnover with the incidence and progression of nonalcoholic fatty liver disease (NAFLD) is unclear. We aimed to evaluate serum levels of bone turnover markers in relation to NAFLD and nonalcoholic hepatic steatohepatitis (NASH). METHODS: Two cohorts were involved in our study. For the first cohort, 370 participants without NAFLD were retrospectively recruited and followed up for incident NAFLD according to ultrasound. For the second cohort, 562 subjects who underwent liver biopsy were included and grouped into non-NAFLD, non-NASH or NASH according to the NASH Clinical Research Network system. The bone turnover markers osteocalcin, C-terminal telopeptide (CTX) and N-terminal propeptide of type-1 procollagen (P1NP) were measured. RESULTS: Baseline osteocalcin was significantly lower in subjects who developed NAFLD (13.93 [11.03;16.39] versus 18.24 [15.45;22.47] ng/ml, P < 0.001), with a median of 26.4 months of follow-up. Low levels of osteocalcin, but not CTX or P1NP, was an independent predictor of incident NAFLD (OR 0.755 [95%CI 0.668; 0.855] P < 0.001). Moreover, the osteocalcin level was negatively associated with the degree of liver steatosis. Furthermore, subjects with NASH had significantly lower osteocalcin than non-NASH and non-NAFLD group (13.28 [10.49;16.59] versus 14.91 [12.45;18.09] versus 18.21 [15.04;22.05] ng/ml, all P < 0.001). A low osteocalcin level was an independent risk factor for NASH (OR for highest versus lowest quartile: 0.282 [0.147;0.543] P < 0.001). CONCLUSION: Low level of osteocalcin, but not CTX or P1NP, was associated with NAFLD and NASH, indicating its potential role as an important endocrine regulator of hepatic energy metabolism.


Asunto(s)
Enfermedad del Hígado Graso no Alcohólico , Humanos , Hígado/metabolismo , Enfermedad del Hígado Graso no Alcohólico/epidemiología , Osteocalcina , Estudios Retrospectivos , Factores de Riesgo
12.
Hepatol Int ; 17(1): 215-224, 2023 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-36071305

RESUMEN

OBJECTIVE: To investigate the association between visceral adipocyte hypertrophy and the onset and development of non-alcoholic fatty liver disease (NAFLD) in subjects with different degrees of adiposity. METHODS: Omental adipose tissue and liver biopsies were collected from obese subjects. NAFLD was defined according to the NASH Clinical Research Network scoring system. Adipocyte size was measured using pathological section analysis. Adipose tissue insulin resistance (Adipo-IR) was calculated as fasting insulin (pmol/L) × fasting free fatty acid concentration (mmol/L). RESULTS: In total, 275 obese patients were enrolled, including 158 females and 58 males with NAFLD. In females, adipocyte size was significantly larger in NAFLD participants as compared to the controls (99.37 ± 14.18 vs. 84.14 ± 12.65 [Formula: see text]m, p < 0.001). Moreover, adipocyte size was larger in females with non-alcoholic steatohepatitis (NASH) as compared to those with non-alcoholic fatty liver (NAFL) (101.45 ± 12.77 vs. 95.79 ± 15.80 [Formula: see text]m, p = 0.015). Mediation analysis showed that adipocyte size impacted the NAFLD activity score through Adipo-IR (b = 0.007 [95% bootstrap CI 0.002, 0.013]). Furthermore, the females were divided into: Q1 (BMI < 32.5 kg/m2), Q2 (BMI 32.5-35.5 kg/m2), Q3 (BMI 35.5-38.8 kg/m2) and Q4 (BMI ≥ 38.8 kg/m2) according to BMI quartiles. Omental adipocyte size was larger in NAFLD subjects in Q1-Q3, but not in Q4. No similar results were observed in males. CONCLUSION: For the first time, we reported that visceral adipocyte hypertrophy was associated with the onset and progression of NAFLD in mild to moderate adiposity but not in severe obesity, which may be mediated by adipose tissue insulin resistance.


Asunto(s)
Resistencia a la Insulina , Enfermedad del Hígado Graso no Alcohólico , Masculino , Femenino , Humanos , Enfermedad del Hígado Graso no Alcohólico/complicaciones , Adiposidad , Obesidad/complicaciones , Adipocitos , Hipertrofia/complicaciones
13.
Fitoterapia ; 165: 105420, 2023 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-36586625

RESUMEN

Three new meroterpenoids, cochlearins J-L (1-3) and three known meroterpenoids (4-6) were isolated from the fruiting bodies of Ganoderma cochlear. NMR (1H and 13C NMR, 1H - 1H COSY, HSQC, HMBC and ROESY), and HRESIMS were employed for the structure elucidation of new compounds. The stereostructures of 1-3 were confirmed by calculated ECD and optical rotation methods. Furthermore, compounds (+)-1, (-)-1, (+)-2, (-)-2, (+)-3, (-)-3, and 4-6 were evaluated for their α-glucosidase inhibitory activity. The results showed that compounds (+)-1, (-)-1 and (+)-2 exhibited stronger inhibition against α-glucosidase with IC50 values of 24.18 ± 1.98, 26.49 ± 3.20 and 29.68 ± 2.73 µM, respectively, compared to the positive control ursolic acid (49.65 ± 2.21 µM). The molecular docking experiments reveal that (+)-2 and (-)-2 had different binding mode with α-glucosidase, leading to their different inhibition.


Asunto(s)
Ganoderma , Terpenos , alfa-Glucosidasas , Ganoderma/química , Simulación del Acoplamiento Molecular , Cuerpos Fructíferos de los Hongos/química , Estructura Molecular
14.
Int J Biol Macromol ; 227: 437-452, 2023 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-36549611

RESUMEN

Cupin proteins are involved in plant growth and development as well as in response to various stresses. Here, a total of 173 Cupin genes were identified in Brassica napus, and their molecular evolution and expression patterns were analyzed. These genes were classified into ten groups. Motif and exon-intron structure indicated a high degree of conservation within each group during evolution. BnaCupins were distributed on 19 chromosomes and their expansion is mainly contributed by whole-genome duplication (WGD) and segmental duplication events. BnaCupins have undergone severe purifying selection during a long evolutionary process. Meanwhile, some positive selection sites were identified. Expression patterns and cis-element analysis indicated that BnaCupins play significant roles in plant growth and stress responses. In addition, the expression levels of some BnCupins were significantly altered when treated with different conditions (cold, salt, drought, IAA, ABA, and 6-BA). Some BnaCupin interacting proteins, such as glycosyl hydrolase5 (GHs5), carbohydrate kinase (CHKs), ATP-dependent 6-phosphofructokinase (ATP-PFK), S-adenosylmethionine synthase (S-MAT), and aldolase class II (ALD II), were identified by the protein-protein interaction network. It will contribute to enriching our knowledge of the Cupin gene family in B. napus and provide a basis for further studies of their functions.


Asunto(s)
Brassica napus , Genes de Plantas , Mapas de Interacción de Proteínas , Evolución Molecular , Adenosina Trifosfato/metabolismo , Filogenia , Proteínas de Plantas/química , Regulación de la Expresión Génica de las Plantas , Estrés Fisiológico/genética
15.
Plant Physiol Biochem ; 194: 685-695, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36565613

RESUMEN

Plant specific SHORT INTERNODES/STYLISH (SHI/STY) protein is a transcription factor involved in the formation and development of early lateral organs in plants. However, research on the SHI/STY protein family is not focused enough. In this article, we review recent studies on SHI/STY genes and explore the evolution and structure of SHI/STY. The biological functions of SHI/STYs are discussed in detail in this review, and the application of each biological function to modern agriculture is discussed. All SHI/STY proteins contain typical conserved RING-like zinc finger domain and IGGH domain. SHI/STYs are involved in the formation and development of lateral root, stem extension, leaf morphogenesis, and root nodule development. They are also involved in the regulation of pistil and stamen development and flowering time. At the same time, the regulation of some GA, JA, and auxin signals also involves these family proteins. For each aspect, unanswered or poorly understood questions were identified to help define future research areas. This review will provide a basis for further functional study of this gene family.


Asunto(s)
Ácidos Indolacéticos , Factores de Transcripción , Factores de Transcripción/genética , Ácidos Indolacéticos/metabolismo , Regulación de la Expresión Génica , Flores/metabolismo , Regulación de la Expresión Génica de las Plantas , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo
16.
Int J Biol Macromol ; 224: 1101-1117, 2023 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-36306895

RESUMEN

La and La-related proteins (LARPs) are RNA-binding proteins regulating gene expression. Here, identification and molecular evolution of La and LARP gene family were performed in 16 plant species. Firstly, 188 La and LARP genes were identified. Based on phylogenetic tree and gene structure, they can be divided into three categories: La, LARP1 and LARP6. LARP1 can be further divided into LARP1-L and LARP1-S sub-categories. Compared with the LARP1-S, one additional DM15 domain was found in the C-terminal of LARP1-L. La and LARP genes are mainly distributed at both ends of chromosomes with a relatively consistent distribution position in A and D genomes of Gossypium hirsutum. Las and LARPs of G. hirsutum probably came from cruciferae, and gene recombination and chromosome structure variation occurred in G. hirsutum during evolution. The expression patterns and the distribution of cis-acting elements were also analyzed. The results showed that Las and LARPs respond to some abiotic stresses and hormone stimulation. The protein interaction network indicated that La and LARP proteins may be involved in meristem differentiation, hormone signal transduction, and post-translational modification. This study will provide a basis for the further functional and evolutional study of this gene family.


Asunto(s)
Gossypium , Proteínas de Unión al ARN , Gossypium/genética , Filogenia , Proteínas de Unión al ARN/metabolismo , Familia de Multigenes , Evolución Molecular , Proteínas de Plantas/genética , Regulación de la Expresión Génica de las Plantas
17.
Artículo en Chino | WPRIM (Pacífico Occidental) | ID: wpr-986015

RESUMEN

Objective: To establish ultra performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) method for the determination of 22 phospholipids in serum. Methods: In September 2022, Using synthetic non endogenous phospholipids as internal standard, phospholipids in serum were extracted by methanol-dichloromethane (2∶1, V/V) protein precipitation method. Chromatographic separation was achieved on an ACQUITY UPLC BEH shield RP18 column, and the mobile phase was methanol/water (5∶95, V/V) containing 10 mM ammonium formate and methanol. Detection was performed in multiple reaction monitoring mode with ion mode switching. And the method was applied by analyzing phospholipids in the serum of coal workers' pneumoconiosis patients. Results: The 22 phospholipids showed good linear relationships in their respective concentration ranges and the correlation coefficients were higher than 0.990. The spiked recoveries of the 22 phospholipids were 81.03%-121.63% at the three spiked levels. The intra-assay were less than 14.52%, and the inter-assay were less than 15.00%. Conclusion: The method with the advantages of simplicity, stability and high sensitivity, and it can be used for the analysis of phospholipids in serum.


Asunto(s)
Humanos , Cromatografía Liquida , Cromatografía Líquida de Alta Presión/métodos , Espectrometría de Masas en Tándem/métodos , Fosfolípidos , Metanol
18.
Zhongguo Yi Xue Ke Xue Yuan Xue Bao ; 44(6): 1075-1081, 2022 Dec.
Artículo en Chino | MEDLINE | ID: mdl-36373641

RESUMEN

Abdominal aortic aneurysm(AAA) is a chronic dilated artery disease induced by atherosclerosis,infection,trauma and other related causes.The available studies about AAA mainly focus on the inflammatory response,senility,and microenvironmental changes,while the research on the metabolic changes such as glucose metabolism and lipid metabolism remains to be conducted.As a critical regulatory factor in endocrine,glucose,and lipid metabolisms,leptin is associated with a variety of signaling pathways such as adenosine monophosphate-activated protein kinase,Janus kinase/signal transducer and activator of transcription,and cytokine-cytokine receptor,as demonstrated by the KEGG pathway enrichment analysis.Moreover,these signaling pathways are generally involved in regulating the occurrence of AAA.In addition,leptin affects the occurrence of a variety of diseases such as obesity,diabetes,and hyperlipidemia,which contribute to the formation of AAA.Diabetes might be a protective factor for the formation of AAA,while the relationship of hyperlipidemia and obesity with the formation of AAA remains unclear.Therefore,leptin might play an essential role in the formation of AAA.Further studies about the effect of leptin on AAA may provide the potential research direction and facilitate the discovery of therapeutic targets.


Asunto(s)
Aneurisma de la Aorta Abdominal , Diabetes Mellitus , Aorta Abdominal/metabolismo , Leptina/efectos adversos , Obesidad , Transducción de Señal , Humanos
19.
Sci Prog ; 105(4): 368504221128487, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36177737

RESUMEN

Within the framework of intelligent bridge detection, a number of crack detection methods based on image processing techniques have been implemented. In this study, a combined novel approach with deep learning of a single shot multibox detector (SSD) and the eight neighborhood algorithm is proposed and applied to bridge crack image identification to provide an automatic method for crack detection. First, a large number of concrete crack images collected from the site were segmented and preprocessed for the establishment of a crack image dataset. Deep learning of the SSD algorithm was introduced on the training set to establish the detection model, where the model parameters were adjusted by the validation set. Sliding window technology was integrated to identify the cracks in the test set. The effects of the sliding window size and dataset size on the crack detection results were discussed. Moreover, the eight neighborhood algorithm was adopted for further crack detection correction. The results show that the configuration achieves good crack detection by the deep learning of the SSD algorithm with high precision and recall. The introduction of the eight neighborhood correction algorithm further improves the detection results by eliminating some misjudged results. Finally, the developed algorithm was placed into a portable device, with which cracks were effectively identified. The introduced method shows significantly better performance in crack detection, and the system installed on the portable device provides a way to broaden its application in the automatic crack detection of concrete bridges.

20.
Front Genet ; 13: 940462, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36046228

RESUMEN

Background: Glioblastoma multiforme (GBM) is the most aggressive primary nervous system brain tumor. There is still a lack of effective methods to control its progression and recurrence in clinical treatment. It is clinically found that Xiaoliu Decoction (XLD) has the effect of treating brain tumors and preventing tumor recurrence. However, its mechanism is still unclear. Methods: Search the Traditional Chinese Medicine System Pharmacology Database (TCSMP) for efficient substances for the treatment of XLD in the treatment of GBM, and target the targeted genes of the effective ingredients to construct a network. At the same time, download GBM-related gene expression data from the TCGA and GTEX databases, screen differential expression bases, and establish a drug target disease network. Through bioinformatics analysis, the target genes and shared genes of the selected Chinese medicines are analyzed. Finally, molecular docking was performed to further clarify the possibility of XLD in multiple GBMs. Results: We screened 894 differentially expressed genes in GBM, 230 XLD active ingredients and 169 predicted targets of its active compounds, of which 19 target genes are related to the differential expression of GBM. Bioinformatics analysis shows that these targets are closely related to cell proliferation, cell cycle regulation, and DNA synthesis. Finally, through molecular docking, it was further confirmed that Tanshinone IIA, the active ingredient of XLD, was tightly bound to key proteins. Conclusion: To sum up, the results of this study suggest that the mechanism of XLD in the treatment of GBM involves multiple targets and signal pathways related to tumorigenesis and development. This study not only provides a new theoretical basis for the treatment of glioblastoma multiforme with traditional Chinese medicine, but also provides a new idea for the research and development of targeted drugs for the treatment of glioblastoma multiforme.

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