1.
J Comput Biol
; 13(6): 1214-31, 2006.
Artículo
en Inglés
| MEDLINE
| ID: mdl-16901238
RESUMEN
Biological weighted sequences are used extensively in molecular biology as profiles for protein families, in the representation of binding sites and often for the representation of sequences produced by a shotgun sequencing strategy. In this paper, we address three fundamental problems in the area of biologically weighted sequences: (i) computation of repetitions, (ii) pattern matching, and (iii) computation of regularities. Our algorithms can be used as basic building blocks for more sophisticated algorithms applied on weighted sequences.
Asunto(s)
Algoritmos , Alineación de Secuencia , Animales , Secuencia de Bases , Sitios de Unión , Biología Computacional , Hemoglobinas/química , Hemoglobinas/genética , Humanos , Datos de Secuencia Molecular
2.
Mol Microbiol
; 27(1): 236-7, 1998 Jan.
Artículo
en Inglés
| MEDLINE
| ID: mdl-9466271