Avian trematodes of central European corvids are heterogeneous regarding preferences for host species and age.

Corvids are highly adaptive birds that respond well to anthropogenic changes in their environment. Trematode communities of corvids were studied mainly in the 1950s through 1970s in regularly flooded parts of the Volga River delta in Russia; more recent studies and data from other regions where the corvids are in less contact with postflooding habitats are limited. Data for Corvus corax were lacking. Using our samples obtained from 1963 to 2023, we performed a large-scale analysis of trematode species composition and community structure in Corvus frugilegus, Corvus cornix, C. corax, Coloeus monedula, Pica pica, and Garrulus glandarius; all originated from the Czech Republic. We identified corvids as hosts of mutually overlapping component communities of only a few species of trematodes (Brachylecithum lobatum, Lyperosomum petiolatum, Lyperosomum longicauda, Tamerlania zarudnyi, Urogonimus macrostomus), with the presence of many rare and incidental findings of other trematode species. Only a few species used corvids as their core hosts (L. longicauda and B. lobatum). Trematode component communities in first-year birds included Prosthogonimus cuneatus, Prosthogonimus ovatus, Plagiorchis asperus, and Morishitium dollfusi due to an increased share of insects (intermediate hosts of Prosthogonimus and Plagiorchis) and snails (intermediate hosts of Morishitium) in the diet of juveniles. The trematode component communities of corvid species overlapped but were heterogeneous at the level of host individuals, likely reflecting differences in food sources related to the respective host ages and nesting sites.

Severe decline in abundance of Cyathostoma lari, a parasite of the nasal and orbital sinuses of gulls, at their central European nesting grounds.

Cyathostoma lari is a parasite of the nasal and orbital sinuses of gulls and other hosts in Europe and Canada. Here, we provide an overview of previously published data on the prevalence and infection intensity of C. lari in gulls. Furthermore, based on our data, we analyze the spatiotemporal trends in the prevalence and intensity of infection by C. lari in Chroicocephalus ridibundus in Czechia (central Europe; data from 1964 to 2014) and compare them with those obtained from five species of gulls in Karelia (Northwest Russia; data from 2012-2020). Based on our preliminary observations, we hypothesized that C. lari is subject to a decline in certain regions, but this decline is not necessarily applicable throughout its distribution range. We found that the C. lari population crashed in specific parts of its distribution range. The reasons are unknown, but the observed population changes correspond with the diet switch of their core host in Czechia, C. ridibundus. We previously observed a diet switch in Czech C. ridibundus from earthworms (intermediate hosts of C. lari) to other types of food. This diet switch affected both young and adult birds. Nevertheless, it may not necessarily affect populations in other regions, where they depend less on earthworms collected from agrocenoses affected by agrochemicals and trampling. Correspondingly, we found that these changes were limited only to regions where the gulls feed (or fed) on arable fields. In Karelia, where arable fields are scarce, gulls likely continue to feed on earthworms and still display high infection rates by C. lari. Therefore, C. lari, a parasite of the nasal and orbital sinuses of gulls, nearly disappeared from their central European nesting grounds but is still present in better-preserved parts of its distribution range.

Molecular characterization of European Pygorchis Looss, 1899.

Adult trematodes of the genus Pygorchis Looss, 1899 (Trematoda: Philophthalmidae) parasitize the cloaca of birds. The genus contains three species, all of which are rarely reported and molecular phylogenetics of which have not been applied. The absence of reference DNA sequences limit studies of their indistinct larval forms. Based on the materials that were obtained from birds of the Czech origin, we performed a molecular characterization of both currently known Pygorchis spp., which are known from the Palearctic, the type species Pygorchis affixus Looss, 1899 and Pygorchis alakolensis Zhatkanbaeva, 1967, and provided morphological description of the examined P. alakolensis specimen. We found that the two species were of similar dimensions; the only difference was in the position of testes and in the extent of vitelline follicles. However, the position of testes in P. affixus was variable, and approximately 10% of examined P. affixus individuals had testes positioned obliquely. The second feature that allows differential diagnostic, the extent of vitelline follicles, was more reproducible as the vitelline follicles of P. affixus did not extend beyond the intestinal caeca, or, in exceptional cases, they extended them at only one side. In the examined P. alakolensis individual, the testes were positioned obliquely, and the vitelline follicles extended beyond the intestinal caeca. We reported P. alakolensis for the first time from Europe; previously, it was known only from Central Asian lakes and rivers. We confirmed the classification of Pygorchis into Philophtalmidae.

New Findings of Trematodes of The Superfamily Echinostomatoidea Looss, 1899 in Birds from The Czech Republic.

In the Czech Republic, 12 freshly dead birds belonging to four species were examined helminthologically during a period of 2015 - 2019. They were six Caspian gulls Larus cachinnans (Lariformes), three goosanders Mergus merganser (Anseriformes), two common snipes Gallinago gallinago, and one common curlew Numenius arquata (Charadriiformes). Concerning trematodes, five echinostomatoids species were found, namely Aporchis massiliensis (obtained from one positive Caspian gull), Echinoparyphium macrovitellatum (one positive from six Caspian gulls), Echinostoma academica (one positive common curlew), Echinostoma stantschinskii (one positive from two common snipes), and Echinochasmus mergi (one positive from three goosanders). All the five echinostomatoids species represent the first records for the helminth fauna of the Czech Republic; the fl ukes A. massiliensis and E. macrovitellatum are recorded for the first time in the Central Europe or the Europe at all, respectively.

The effect of urbanization on helminth communities in the Eurasian blackbird (Turdus merula L.) from the eastern part of the Czech Republic.

In the present study we investigated two ecologically distinct populations of T. merula for the presence of helminths. We wished to determine whether urban populations of blackbirds had reduced helminth fauna compared to birds from forest habitats. Birds were caught in two ecologically distinct sites located in the eastern part of the Czech Republic. A total of 320 birds were examined. The first site was located in Prerov where the birds were obtained from a typical urban population, and the second site was Zahlinice, which constitutes a typical forest area. As a result of parasitological examination, 30 helminth species belonging to Digenea, Cestoda, Nematoda and Acanthocephala were recorded from both sites: 29 species were found in the forested site and 15 in the urban site. The overall prevalence of infection was 93.1% and differed significantly between the sites (Zahlinice 97.2%, Prerov 85.1%). The mean species richness was almost three times higher in the forest population (3.37 ± 0.10) than in the urban one (1.78 ± 0.11). The clear qualitative and quantitative differences in the helminth community of T. merula obtained from two ecologically disparate localities show that urbanization leads to a significant reduction in the helminth fauna of a bird which is highly adapted to synanthropic habitats, while still remaining common in its original forest habitat.

Digenean communities in the tufted duck [Aythya fuligula (L., 1758)] and greater scaup [A. marila (L., 1761)] wintering in the north-west of Poland.

A total of 124 specimens of the tufted duck, Aythya fuligula, and 63 greater scaup, A. marila, were examined for digenean parasites. Both duck species, which overwinter in a coastal lake connected with the southern Baltic (north-west Poland) were found to support Amblosoma exile, Cyathocotyle prussica, Paracoenogonimus ovatus, Australapatemon minor, Cotylurus cornutus, Echinoparyphium recurvatum, Echinostoma revolutum and Notocotylus attenuatus. In addition, the tufted duck hosted Hypoderaeum conoideum, Bilharziella polonica, Neoeucotyle zakharovi, Renicola mediovitellata, Psilochasmus oxyurus, Psilostomum brevicolle and Cryptocotyle concava; Echinostoma nordiana occurred in the greater scaup only. The two duck species differed significantly in the intensity and abundance of their digenean infection. Aythya marila harboured higher intensity levels and a wider assemblage of digeneans than A. fuligula, and this was likely to be due to differences in the pre-wintering exposure of the duck species to infective stages of these freshwater digeneans. Digenean communities in both duck species, strongly dominated by E. recurvatum, were relatively similar in their structure. No significant sex-dependent differences in digenean infections were revealed, except for the infection with N. attenuatus in A. fuligula. Similarly, there were no significant age-dependent differences (adult versus immature birds) in digenean infections, except for that with N. attenuatus in A. fuligula. The structural similarity between digenean communities in the two duck species is most likely an effect of overlapping diets based on freshwater molluscs, components of the digenean transmission pathway to definitive hosts.

Serologic survey of birds for West Nile flavivirus in southern Moravia (Czech Republic).

A serosurvey for West Nile virus (WNV) was carried out in 54 domestic birds (geese and ducks bred on fishponds) and 391 wild birds representing 28 migratory and resident species, using a plaque-reduction neutralization microtest with Vero cells and Egyptian topotype Eg-101 strain as test virus. The birds were sampled in the South-Moravian fishpond ecosystem between 2004 and 2006. Antibodies to WNV were not detected in domestic waterfowl, but 23 (5.9%) free-living birds of 10 species showed a positive response. These were the common coot (Fulica atra, 5 positive/18 examined), common kingfisher (Alcedo atthis, 1/1), reed warbler (Acrocephalus scirpaceus, 2/80), sedge warbler (A. schoenobaenus, 3/80), marsh warbler (A. palustris, 2/28), Savi's warbler (Locustella luscinioides, 3/12), reed bunting (Emberiza schoeniclus, 1/28), blackcap (Sylvia atricapilla, 2/11), penduline tit (Remiz pendulinus, 1/14), blue tit (Parus caeruleus, 1/1), and starling (Sturnus vulgaris, 2/4). The antibody titers were comparatively low (1:20-1:40), and the only high titer (1:160) was found in an adult marsh warbler. When 14 of the sera reacting with WNV were titrated in parallel with Usutu Flavivirus, 12 were interpreted as having specific antibodies to WNV, one coot had a higher titer against Usutu virus, and another one could not be attributed to either of the two viruses. In conclusion, 13 (3.3%) of 391 wild birds had specific antibodies to WNV. The results indicate that WNV activity in southern Moravia was limited during 2004-2006.

Where in Europe should we look for sources of the cutaneous trematode Collyriclum faba infections in migrating birds?

Cutaneous cysts with trematodes of Collyriclum faba have been found in birds during their spring and post-breeding migrations in the Czech Republic. During spring migrations, C. faba was found in one dunnock Prunella modularis, two European robins Erithacus rubecula, three common nightingales Luscinia megarhynchos, one song thrush Turdus philomelos and one great reed warbler Acrocephalus arundinaceus. During post-breeding migration, the same parasite was found in one garden warbler Sylvia borin, one whitehroat S. communis, three goldcrests Regulus regulus and one Eurasian treecreeper Certhia familiaris. The newly identified hosts of C. faba are dunnock, common nightingale, song thrush, great reed warbler and Eurasian treecreeper. Geographical areas of the birds' infection were identified from an analysis of reports on ringed birds of the same species, the time necessary for the development of cutaneous cysts with C. faba and the time of their survival, and hitherto known geographical areas of endemic occurrence of C. faba. It is presumed that birds trapped during spring migrations were infected in some montane and submontane regions in south-western Europe (the Alps, the Apennines). Birds infected during autumn migration or post-breeding vagrancy could have been infected in the Central European Carpathians, the region of C. faba endemic occurrence. For migrating birds, the impact of C. faba infections has not been hitherto assessed.

Unusual finding of Trichobilharzia sp. in Motacilla alba in the Czech Republic.

Adult male worms of Trichobilharzia sp. recovered from a pied wagtail (Motacilla alba) in the Czech Republic were found to belong to a new species of the genus. The finding of Trichobilharzia sp. in a passeriform bird in Europe represents an important discovery, as only anseriform birds have thus far been reported as final hosts of the European Trichobilharzia species.

Occurrence of intermediate hosts and structure of digenean communities of the black-headed gull, Larus ridibundus (L.).

The factors contributing to the similarity between digenean parasite assemblages parasitizing the black-headed gull were investigated. Thirteen different digenean species from the digestive tract and the bursa of Fabricus were found. We predicted that the structure of parasite communities is not random at either component community or infracommunity levels. We searched for nested patterns in the digenean community, and explored the possible factors contributing to nestedness. We found that digenean species which occupy a narrow range of intermediate hosts are placed out of order in the nested matrix. The influence of several variables related to the water reservoir, geographical distances, and the abundance of intermediate hosts on the species diversity and similarity of parasite communities were tested as well. Because of the complexity in bird digenean life-cycles we supposed that intermediate hosts and ecological characters of their environment could play a major role. We showed that the presence of intermediate hosts is the factor limiting the qualitative and quantitative similarity of parasite communities among different host populations as well as influencing the digenean species diversity in the definitive host. The similarity in abundance of intermediate hosts between different localities was facilitated by the presence of vegetation in water reservoir and more diversified type of water bottom. Digenean species diversity was higher when the water reservoir was exposed to temporal drying. We hypothesized that this factor could facilitate the inclusion of molluscs infected by digeneans in the diet of birds. Both species diversity and dominance were influenced by the bottom type of water reservoir and temporal drying up. Geographical distances between localities influenced the quantitative similarity of digenean communities as well as species richness.

Sequence-dependent DNA condensation and the electrostatic zipper.

Sequence-dependent configuration changes and condensation of double-stranded poly(dG-dC).(dG-dC) (GC-DNA) and ds poly(dA-dT).(dA-dT) (AT-DNA) were observed by atomic force microscopy in the presence of Ni(II). Less condensing agent was required to generate configuration changes in GC-DNA as compared to AT-DNA. In the presence of Ni(II) cations, GC-DNA adopted a Z-type conformation and underwent a stepwise condensation, starting with partial intramolecular folding, followed by intermolecular condensation of two to several molecules and ending with the formation of toroids, rods, and jumbles. GC-DNA condensates were unusual in that the most highly condensed regions were surrounded by loops of ds GC-DNA. In contrast, AT-DNA retained its B-type conformation and displayed only minor condensation even at high Ni(II) concentrations. The Ni(II)-dependent differences in condensation between GC-DNA and AT-DNA are predicted by an extension of the electrostatic zipper motif proposed by Kornyshev and Leikin, in which we account for shorter than Debye screening length surface separations between the DNA molecules and for the Ni(II)-induced conformation change of GC-DNA to Z-DNA.

Recent highlights from atomic force microscopy of DNA.

Abstract Seven recent highlights are presented from atomic force microscopy (AFM) of DNA in this lab. The first two involve advances in the observation of enzymatic reactions in near-physiological solutions. E. coli RNA polymerase was observed to process along its DNA template in a series of time-lapse images [S. Kasas, et al., Biochemistry 36, 461 (1997)], and a new small-cantilever atomic force microscope (AFM) imaged DNA degradation by DNase I at rates as fast as two seconds per image. The next five highlights involve structural observations of DNA and DNA-protein complexes, including DNA condensed for gene delivery, sequence-dependent DNA condensation, an AFM assay for RNA polymerase, and AFM evidence for a yeast kinetochore complex that may be involved in holding together sister chromatids during cell division.

[Trematodes parasitizing the white-tailed eagle (Haliaeetus albicilla L.)]. / Przywry pasozytujace u orla bielika (Haliaeetus albicilla L.).

Five white-tailed eagles were dissected--3 from the Czech Republic and 2 from Poland. 4 specimens were infected with trematodes only: Strigea falconis, Neodiplostomum (Conodiplostomum) perlatum, and Paracoenogonimus ovatus. S. falconis was found for the first time in an eagle from the Czech Republic, whereas N. (C.) perlatum and P. ovatus were detected for the first time in eagle from Poland. Moreover, N. (C.) perlatum is a new species for the Polish parasite fauna.