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1.
Ann N Y Acad Sci ; 986: 90-5, 2003 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-12763779

RESUMEN

We have found that despite a markedly low calcium affinity the D813A/D818A mutant is capable, after complexation with Cr.ATP, of occluding Ca(2+) to the same extent (1-2 Ca(2+) per ATPase monomer) as wild- type ATPase. The inherent ability of the synthetic L6-7 loop peptide to bind Ca(2+) was demonstrated with murexide and mass spectrometry. NMR analysis indicated the formation of specific 1:1 cation complexes of the peptide with calcium and lanthanum with coordination by all three aspartate residues D813/D815/D818 that resulted in an altered conformation of the peptide chain. Overall our observations suggest that, in addition to mediating contact between the intramembranous Ca(2+) binding sites and the cytosolic phosphorylation site as previously suggested, the L6-7 loop, in a preceding step, participates in the formation of an entrance port important for lodging Ca(2+) at a high-affinity binding site inside the membrane.


Asunto(s)
Adenosina Trifosfato/metabolismo , ATPasas Transportadoras de Calcio/química , ATPasas Transportadoras de Calcio/metabolismo , Calcio/metabolismo , Fragmentos de Péptidos/química , Animales , Transporte Biológico Activo , ATPasas Transportadoras de Calcio/genética , Clonación Molecular , Citoplasma/enzimología , Cinética , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Estructura Secundaria de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Saccharomyces cerevisiae/enzimología , ATPasas Transportadoras de Calcio del Retículo Sarcoplásmico
2.
J Mol Biol ; 318(2): 557-69, 2002 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-12051859

RESUMEN

Binding of bacteriophage T5 to Escherichia coli cells is mediated by specific interactions between the receptor-binding protein pb5 (67.8 kDa) and the outer membrane iron-transporter FhuA. A histidine-tagged form of pb5 was overproduced and purified. Isolated pb5 is monomeric and organized mostly as beta-sheets (51%). pb5 functionality was attested in vivo by its ability to impair infection of E. coli cells by phage T5 and Phi80, and to prevent growth of bacteria on iron-ferrichrome as unique iron source. pb5 was functional in vitro, since addition of an equimolar concentration of pb5 to purified FhuA prevented DNA release from phage T5. However, pb5 alone was not sufficient for the conversion of FhuA into an open channel. Direct interaction of pb5 with FhuA was demonstrated by isolating a pb5/FhuA complex using size-exclusion chromatography. The stoichiometry, 1 mol of pb5/1 mol of FhuA, was deduced from its molecular mass, established by analytical ultracentrifugation after determination of the amount of bound detergent. SDS-PAGE and differential scanning calorimetry experiments highlighted the great stability of the complex: (i) it was not dissociated by 2% SDS even when the temperature was raised to 70 degrees C; (ii) thermal denaturation of the complex occurred at 85 degrees C, while pb5 and FhuA were denatured at 45 degrees C and 74 degrees C, respectively. The stability of the complex renders it suitable for high-resolution structural studies, allowing future analysis of conformational changes into both FhuA and pb5 upon adsorption of the virus to its host.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa/química , Proteínas de Escherichia coli/química , Receptores Virales/química , Proteínas Virales/química , Proteínas de la Membrana Bacteriana Externa/genética , Sitios de Unión , Cromatografía en Gel , Dicroismo Circular , Estabilidad de Medicamentos , Escherichia coli/química , Escherichia coli/genética , Escherichia coli/virología , Proteínas de Escherichia coli/genética , Canales Iónicos/química , Sustancias Macromoleculares , Desnaturalización Proteica , Receptores Virales/genética , Proteínas Recombinantes/química , Fagos T/química , Fagos T/genética , Temperatura , Termodinámica , Ultracentrifugación , Proteínas Virales/genética
3.
J Cell Biol ; 153(6): 1301-14, 2001 Jun 11.
Artículo en Inglés | MEDLINE | ID: mdl-11402072

RESUMEN

By pumping calcium from the cytosol to the ER, sarco/endoplasmic reticulum calcium ATPases (SERCAs) play a major role in the control of calcium signaling. We describe two SERCA1 splice variants (S1Ts) characterized by exon 4 and/or exon 11 splicing, encoding COOH terminally truncated proteins, having only one of the seven calcium-binding residues, and thus unable to pump calcium. As shown by semiquantitative RT-PCR, S1T transcripts are differentially expressed in several adult and fetal human tissues, but not in skeletal muscle and heart. S1T proteins expression was detected by Western blot in nontransfected cell lines. In transiently transfected cells, S1T homodimers were revealed by Western blot using mildly denaturing conditions. S1T proteins were shown, by confocal scanning microscopy, to colocalize with endogenous SERCA2b into the ER membrane. Using ER-targeted aequorin (erAEQ), we have found that S1T proteins reduce ER calcium and reverse elevation of ER calcium loading induced by SERCA1 and SERCA2b. Our results also show that SERCA1 variants increase ER calcium leakage and are consistent with the hypothesis of a cation channel formed by S1T homodimers. Finally, when overexpressed in liver-derived cells, S1T proteins significantly induce apoptosis. These data reveal a further mechanism modulating Ca(2+) accumulation into the ER of nonmuscle cells and highlight the relevance of S1T proteins to the control of apoptosis.


Asunto(s)
Apoptosis , ATPasas Transportadoras de Calcio/metabolismo , Calcio/metabolismo , Retículo Endoplásmico/metabolismo , Empalme del ARN , Adulto , Secuencia de Aminoácidos , ATPasas Transportadoras de Calcio/química , ATPasas Transportadoras de Calcio/genética , Clonación Molecular , Dimerización , Expresión Génica , Células HeLa , Humanos , Membranas Intracelulares/metabolismo , Datos de Secuencia Molecular , Isoformas de Proteínas/química , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo , Estructura Secundaria de Proteína , ATPasas Transportadoras de Calcio del Retículo Sarcoplásmico , Distribución Tisular , Células Tumorales Cultivadas
4.
Biophys J ; 80(6): 2898-911, 2001 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-11371462

RESUMEN

As an extension of our studies on the interaction of detergents with membranes and membrane proteins, we have investigated their binding to water-soluble proteins. Anionic aliphatic compounds (dodecanoate and dodecylsulfate) were bound to serum albumin with high affinity at nine sites; related nonionic detergents (C12E8 and dodecylmaltoside) were bound at seven to eight sites, many in common with those of dodecanoate. The compounds were also bound in the hydrophobic cavity of beta-lactoglobulin, but not to ovalbumin. In addition to the generally recognized role of the Sudlow binding region II of serum albumin (localized at the IIIA subdomain) in fatty acid binding, quenching of the fluorescence intensity of tryptophan-214 by 7,8-dibromododecylmaltoside and 12-bromododecanoate also implicate the Sudlow binding region I (subdomain IIA) as a locus for binding of aliphatic compounds. Our data document the usefulness of dodecyl amphipathic compounds as probes of hydrophobic cavities in water-soluble proteins. In conjunction with recent x-ray diffraction analyses of fatty acid binding as the starting point we propose a new symmetrical binding model for the location of nine high-affinity sites on serum albumin for aliphatic compounds.


Asunto(s)
Detergentes/metabolismo , Sondas Moleculares/metabolismo , Albúmina Sérica/química , Albúmina Sérica/metabolismo , Agua/metabolismo , Regulación Alostérica , Secuencia de Aminoácidos , Animales , Unión Competitiva , Bovinos , Pollos , Ácidos Grasos/metabolismo , Fluorescencia , Humanos , Lactoglobulinas/química , Lactoglobulinas/metabolismo , Ligandos , Modelos Moleculares , Datos de Secuencia Molecular , Ovalbúmina/química , Ovalbúmina/metabolismo , Unión Proteica , Conformación Proteica , Alineación de Secuencia , Solubilidad , Electricidad Estática , Termodinámica , Triptófano/metabolismo
5.
Biochim Biophys Acta ; 1508(1-2): 86-111, 2000 Nov 23.
Artículo en Inglés | MEDLINE | ID: mdl-11090820

RESUMEN

Detergents are indispensable in the isolation of integral membrane proteins from biological membranes to study their intrinsic structural and functional properties. Solubilization involves a number of intermediary states that can be studied by a variety of physicochemical and kinetic methods; it usually starts by destabilization of the lipid component of the membranes, a process that is accompanied by a transition of detergent binding by the membrane from a noncooperative to a cooperative interaction already below the critical micellar concentration (CMC). This leads to the formation of membrane fragments of proteins and lipids with detergent-shielded edges. In the final stage of solubilization membrane proteins are present as protomers, with the membrane inserted sectors covered by detergent. We consider in detail the nature of this interaction and conclude that in general binding as a monolayer ring, rather than as a micelle, is the most probable mechanism. This mode of interaction is supported by neutron diffraction investigations on the disposition of detergent in 3-D crystals of membrane proteins. Finally, we briefly discuss the use of techniques such as analytical ultracentrifugation, size exclusion chromatography, and mass spectrometry relevant for the structural investigation of detergent solubilized membrane proteins.


Asunto(s)
Detergentes/química , Lípidos de la Membrana/química , Proteínas de la Membrana/química , Tensoactivos/química , Cristalografía , Membrana Dobles de Lípidos/química , Micelas , Estructura Molecular , Polietilenglicoles/química , Conformación Proteica , Dispersión de Radiación , Solubilidad
7.
Int J Radiat Biol ; 76(5): 673-81, 2000 May.
Artículo en Inglés | MEDLINE | ID: mdl-10866290

RESUMEN

PURPOSE: To test whether radiolysis-induced fragmentation in frozen aqueous protein solution is dependent on solvent access to the surface of the protein or to the molecular mass of the polypeptide chain. MATERIALS AND METHODS: 60Co gamma-irradiation of three proteins at -78 degrees C: lysozyme, citrate synthase and alpha-lactalbumin in their native state, with or without bound substrate, or denatured (random coil in urea/acid-denatured state). RESULTS: By SDS-polyacrylamide gel electrophoresis/analysis of the protein-fragmentation process, it was found that for a given protein D37 values (dose to decrease the measured amount of protein, with an unaltered polypeptidic chain, to 37% of the initial amount) varied according to the state of the protein. D37 for denatured proteins was always much smaller than for native states, indicating a greater susceptibility to fragmentation. In urea, contrary to the native state, no well-defined fragments were observed. Radiolysis decay constants (K= 1/D37) increased with solvent-accessible surface area of these proteins estimated from their radii of gyration in the various states. This is shown also in previous data on native or SDS-denatured proteins. Denatured proteins which have a large surface area exposed to the solvent compared with native ones are more fragmented at equal doses. CONCLUSIONS: It is concluded that D37 is directly related to the exposed surface area and not to the molecular mass of the polypeptide chain.


Asunto(s)
Citrato (si)-Sintasa/metabolismo , Lactalbúmina/metabolismo , Muramidasa/metabolismo , Animales , Pollos , Radioisótopos de Cobalto , Electroforesis en Gel de Poliacrilamida , Congelación , Rayos gamma , Cobayas , Ligandos , Modelos Químicos , Modelos Estadísticos , Miocardio/enzimología , Conformación Proteica/efectos de la radiación , Desnaturalización Proteica/efectos de la radiación , Pliegue de Proteína , Porcinos , Urea/metabolismo
8.
Oncogene ; 19(25): 2877-86, 2000 Jun 08.
Artículo en Inglés | MEDLINE | ID: mdl-10871838

RESUMEN

We have used the Hepatitis B Virus DNA genome as a probe to identify genes clonally mutated in vivo, in human liver cancers. In a tumor, HBV-DNA was found to be integrated into the gene encoding Sarco/Endoplasmic Reticulum Calcium ATPase (SERCA), which pumps calcium, an important intracellular messenger for cell viability and growth, from the cytosol to the endoplasmic reticulum. The HBV X gene promoter cis-activates chimeric HBV X/SERCA1 transcripts, with splicing of SERCA1 exon 11, encoding C-terminally truncated SERCA1 proteins. Two chimeric HBV X/SERCA1 proteins accumulate in the tumor and form dimers. In vitro analyses have demonstrated that these proteins localize to the ER, determine its calcium depletion and induce cell death. We have also shown that these biological effects are related to expression of the SERCA, rather than of the viral moiety. This report involves for the first time the expression of mutated SERCA proteins in vivo in a tumor cell proliferation and in vitro in the control of cell viability. Oncogene (2000).


Asunto(s)
Apoptosis/genética , ATPasas Transportadoras de Calcio/genética , Virus de la Hepatitis B/fisiología , Mutagénesis Insercional/genética , Anciano , ATPasas Transportadoras de Calcio/metabolismo , Dimerización , Humanos , ARN Mensajero/genética , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Retículo Sarcoplasmático/enzimología , Células Tumorales Cultivadas , Integración Viral
9.
J Biol Chem ; 275(40): 31428-37, 2000 Oct 06.
Artículo en Inglés | MEDLINE | ID: mdl-10807921

RESUMEN

Oligomerization of viral envelope proteins is essential to control virus assembly and fusion. The transmembrane domains (TMDs) of hepatitis C virus envelope glycoproteins E1 and E2 have been shown to play multiple functions during the biogenesis of E1E2 heterodimer. This makes them very unique among known transmembrane sequences. In this report, we used alanine scanning insertion mutagenesis in the TMDs of E1 and E2 to examine their role in the assembly of E1E2 heterodimer. Alanine insertion within the center of the TMDs of E1 or E2 or in the N-terminal part of the TMD of E1 dramatically reduced heterodimerization, demonstrating the essential role played by these domains in the assembly of hepatitis C virus envelope glycoproteins. To better understand the alanine scanning data obtained for the TMD of E1 which contains GXXXG motifs, we analyzed by circular dichroism and nuclear magnetic resonance the three-dimensional structure of the E1-(350-370) peptide encompassing the N-terminal sequence of the TMD of E1 involved in heterodimerization. Alanine scanning results and the three-dimensional molecular model we obtained provide the first framework for a molecular level understanding of the mechanism of hepatitis C virus envelope glycoprotein heterodimerization.


Asunto(s)
Membrana Celular/química , Membrana Celular/metabolismo , Alanina/química , Secuencia de Aminoácidos , Antígenos CD4/metabolismo , Línea Celular , Cromatografía Líquida de Alta Presión , Dicroismo Circular , Dimerización , Retículo Endoplásmico/metabolismo , Humanos , Espectroscopía de Resonancia Magnética , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Oligosacáridos/metabolismo , Péptidos/síntesis química , Plásmidos/metabolismo , Pruebas de Precipitina , Pliegue de Proteína , Estructura Terciaria de Proteína , Relación Estructura-Actividad , Factores de Tiempo , Células Tumorales Cultivadas , Rayos Ultravioleta , Proteínas del Envoltorio Viral/química , Proteínas del Envoltorio Viral/fisiología
10.
J Biol Chem ; 275(25): 18623-37, 2000 Jun 23.
Artículo en Inglés | MEDLINE | ID: mdl-10747917

RESUMEN

Amphipols are short-chain amphipathic polymers designed to keep membrane proteins soluble in aqueous solutions. We have evaluated the effects of the interaction of amphipols with sarcoplasmic reticulum Ca(2+)-ATPase either in a membrane-bound or a soluble form. If the addition of amphipols to detergent-solubilized ATPase was followed by removal of detergent, soluble complexes formed, but these complexes retained poor ATPase activity, were not very stable upon long incubation periods, and at high concentrations they experienced aggregation. Nevertheless, adding excess detergent to diluted detergent-free ATPase-amphipol complexes incubated for short periods immediately restored full activity to these complexes, showing that amphipols had protected solubilized ATPase from the rapid and irreversible inactivation that otherwise follows detergent removal. Amphipols also protected solubilized ATPase from the rapid and irreversible inactivation observed in detergent solutions if the ATPase Ca(2+) binding sites remain vacant. Moreover, in the presence of Ca(2+), amphipol/detergent mixtures stabilized concentrated ATPase against inactivation and aggregation, whether in the presence or absence of lipids, for much longer periods of time (days) than detergent alone. Our observations suggest that mixtures of amphipols and detergents are promising media for handling solubilized Ca(2+)-ATPase under conditions that would otherwise lead to its irreversible denaturation and/or aggregation.


Asunto(s)
ATPasas Transportadoras de Calcio/metabolismo , Polímeros/metabolismo , Retículo Sarcoplasmático/enzimología , Unión Competitiva , ATPasas Transportadoras de Calcio/química , Detergentes/metabolismo , Concentración de Iones de Hidrógeno , Tamaño de la Partícula , Desnaturalización Proteica , Solubilidad
11.
Biochemistry ; 38(18): 5813-21, 1999 May 04.
Artículo en Inglés | MEDLINE | ID: mdl-10231532

RESUMEN

In current topological models, the sarcoplasmic reticulum Ca2+-ATPase contains 10 putative transmembrane spans (M1-M10), with spans M4/M5/M6 and probably M8 participating in the formation of the membranous calcium-binding sites. We describe here the conformational properties of a synthetic peptide fragment (E785-N810) encompassing the sixth transmembrane span (M6) of Ca2+-ATPase. Peptide M6 includes three residues (N796, T799, and D800) out of the six membranous residues critically involved in the ATPase calcium-binding sites. 2D-NMR experiments were performed on the M6 peptide selectively labeled with 15N and solubilized in dodecylphosphocholine micelles to mimic a membrane-like environment. Under these conditions, M6 adopts a helical structure in its N-terminal part, between residues I788 and T799, while its C-terminal part (G801-N810) remains disordered. Addition of 20% trifluoroethanol stabilizes the alpha-helical N-terminal segment of the peptide, and reveals the propensity of the C-terminal segment (G801-L807) to form also a helix. This second helix is located at the interface or in the aqueous environment outside the micelles, while the N-terminal helix is buried in the hydrophobic core of the micelles. Furthermore, the two helical segments of M6 are linked by a flexible hinge region containing residues T799 and D800. These conformational features may be related to the transient formation of a Schellman motif (L797VTDGL802) encoded in the M6 sequence, which probably acts as a C-cap of the N-terminal helix and induces a bend with respect to the helix axis. We propose a model illustrating two conformations of M6 and its insertion in the membrane. The presence of a flexible region within M6 would greatly facilitate concomitant participation of all three residues (N796, T799, and D800) believed to be involved in calcium complexation.


Asunto(s)
ATPasas Transportadoras de Calcio/química , Resonancia Magnética Nuclear Biomolecular , Retículo Sarcoplasmático/enzimología , Secuencia de Aminoácidos , Calcio/química , Cationes Bivalentes , Membrana Celular/enzimología , Dicroismo Circular , Micelas , Modelos Moleculares , Datos de Secuencia Molecular , Conformación Proteica , Estructura Secundaria de Proteína
13.
Anal Biochem ; 264(2): 141-8, 1998 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-9866675

RESUMEN

We describe a method for estimating ligand binding to a macromolecular sample under conditions where this binding is of low affinity and must be measured under equilibrium conditions, without removal of the unbound ligand. The method is based on centrifugal ultrafiltration through a membrane with a molecular mass cut-off intermediate between that of the ligand and that of the target, and the amount of bound ligand is calculated from the difference between the (total) ligand in the concentrated sample and the (free) ligand in the ultrafiltrate. Centrifugal ultrafiltration makes it possible to separate free ligand from bound ligand (without changing its concentration) and to simultaneously concentrate the target (such that the proportion of bound ligand becomes significant, even under low-affinity binding conditions). We applied this technique, using Centricon 10 (Amicon) devices, to several cases (soluble proteins, intact membranes, detergent-solubilized proteins, and pure detergent micelles) and assessed its value with respect to the common artifacts that occur in other protocols involving protein retention on nitrocellulose filters (nonspecific ligand adsorption and protein denaturation).


Asunto(s)
Centrifugación/métodos , Micelas , Proteínas/metabolismo , Ultrafiltración/métodos , Adenosina Trifosfato/metabolismo , Adsorción , Animales , Centrifugación/instrumentación , Colodión , Detergentes , Diálisis , Ligandos , Proteínas de la Membrana/metabolismo , Metales/metabolismo , Filtros Microporos , Peso Molecular , Unión Proteica , Retículo Sarcoplasmático/metabolismo , Solubilidad , Termodinámica , Ultrafiltración/instrumentación
14.
Eur J Biochem ; 257(1): 216-27, 1998 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-9799122

RESUMEN

The transmembrane sector of sarcoplasmic reticulum Ca2+-ATPase comprises ten putative transmembrane spans (M1-M10) in current topology models. We report here the structure and properties of three synthetic peptides with a single Trp representing the M6 and M7 regions implicated in Ca2+ binding: peptide M6 (amino acid residues 785-810), peptide M7-L (amino acid residues 808-847) corresponding to loop 6-7 and the majority of span M7, and peptide M7-S (amino acid residues 818-847) which contains a shorter version of loop 6-7 than M7-L. After uptake of the peptides in the hydrophobic environment of dodecyl maltoside micelles, the peptides gain a significant amount of secondary structure, as indicated by their CD spectra. However, the alpha-helical content of M6 is lower than would be expected for a classical transmembrane segment. For M7-L peptide, the L6-7 loop is subject to specific proteolytic cleavage by proteinase K, as in intact Ca2+-ATPase. The formation of the peptide-detergent complexes was followed from the resulting fluorescence intensity changes, either enhancement using n-dodecyl beta-D-maltoside or quenching using the recently introduced brominated analog of n-dodecyl beta-D-maltoside: 7,8-dibromododecyl beta-maltoside [de Foresta, B., Legros, N., Plusquellec, D., le Maire, M. & Champeil, P. (1996) Eur J. Biochem. 241, 343-354]. Our results indicate that M7-L and M7-S are completely taken up by the detergent micelles. In contrast, the M6 peptide, which is highly water soluble, is more loosely associated with the detergent, as is also demonstrated by size-exclusion chromatography. The location of Trp in micelles was evaluated from the quenching observed in mixed micelles of n-dodecyl beta-D-maltoside/7,8-dibromododecyl beta-maltoside, using tryptophan octyl ester and solubilized Ca2+-ATPase as reference compounds. We conclude that W832 in M7 appears to be located near the surface of the micelle, in agreement with its membrane interfacial localization predicted in most Ca2+-ATPase topology models. In contrast, our data suggest that W794 in M6 has a deeper insertion in the micelle although not to the extent predicted by current models of Ca2+-ATPase and the rather short alpha-helix span of M6 may lead to exposure of a significant part of the C-terminal of this peptide to the micelle surface. The results are discussed in relation to the proposed roles of these membrane segments in active transport of Ca2+ ions, in particular, the demonstration that M6 does not behave as a classical transmembrane helix may be correlated with the evidence, from site-directed mutagenesis, that this transmembrane segment should be essential in Ca2+ binding.


Asunto(s)
ATPasas Transportadoras de Calcio/química , Glucósidos/química , Fragmentos de Péptidos/química , Secuencia de Aminoácidos , Bromo/química , Secuencia de Carbohidratos , Endopeptidasa K/química , Hidrólisis , Datos de Secuencia Molecular , Estructura Secundaria de Proteína , Espectrometría de Fluorescencia
15.
Biophys J ; 75(6): 2932-46, 1998 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-9826614

RESUMEN

The present study explores intermediate stages in detergent solubilization of liposomes and Ca2+-ATPase membranes by sodium dodecyl sulfate (SDS) and medium-sized ( approximately C12) nonionic detergents. In all cases detergent partitioning in the membranes precedes cooperative binding and solubilization, which is facilitated by exposure to detergent micelles. Nonionic detergents predominantly interact with the lipid component of Ca2+-ATPase membranes below the CMC (critical micellar concentration), whereas SDS extracts Ca2+-ATPase before solubilization of lipid. At the transition to cooperative binding, n-dodecyl octaethylene glycol monoether (C12E8), Triton X-100, and dodecyldimethylamine oxide induce fusion of small unilamellar liposomes to larger vesicles before solubilization. Solubilization of Ca2+-ATPase membranes is accompanied by membrane fragmentation and aggregation rather than vesicle fusion. Detergents with strongly hydrophilic heads (SDS and beta-D-dodecylmaltoside) only very slowly solubilize liposomal membranes and do not cause liposome fusion. These properties are correlated with a slow bilayer flip-flop. Our data suggest that detergent solubilization proceeds by a combination of 1) a transbilayer attack, following flip-flop of detergent molecules across the lipid bilayer, and 2) extraction of membrane components directly by detergent micelles. The present study should help in the design of efficient solubilization protocols, accomplishing the often delicate balance between preserving functional properties of detergent sensitive membrane proteins and minimizing secondary aggregation and lipid content.


Asunto(s)
Liposomas , Proteínas de la Membrana/aislamiento & purificación , Animales , Fenómenos Biofísicos , Biofisica , ATPasas Transportadoras de Calcio/aislamiento & purificación , Detergentes , Cinética , Membrana Dobles de Lípidos , Micelas , Fosfatidilcolinas , Unión Proteica , Conejos , Dodecil Sulfato de Sodio , Solubilidad , Termodinámica
16.
FEBS Lett ; 437(3): 187-92, 1998 Oct 23.
Artículo en Inglés | MEDLINE | ID: mdl-9824287

RESUMEN

The sarcoplasmic reticulum Ca2+-ATPase and the gastric H+,K+-ATPase were cleaved under three different proteolysis conditions. After elimination of the protease and of the cleaved peptides, the vesicles containing the membrane-bound peptides of the ATPases were studied by Fourier transform attenuated total reflection infrared spectroscopy. In the harsher proteolysis conditions, the membrane-associated domain of the Ca2+-ATPase represented about 20% of the protein and was mainly constituted of alpha-helices. Polarized infrared spectroscopy showed that these alpha-helices were mainly oriented perpendicular to the membrane. However, only 10-20% of the H+,K+-ATPase was cleaved. The remaining, membrane-associated domain of the protein contained about 30% of alpha-helices and 30% of beta-sheet structures. The alpha-helices adopted a mainly transmembrane orientation. While the data on the Ca2+-ATPase are in general agreement with the current model of the protein, our results indicate that caution must be used in choosing this protein as a general structural model for all P-type ATPases. The protease-resistant, membrane-associated domain of the H+K+-ATPase is indeed much larger than predicted and also contained beta-sheet structures.


Asunto(s)
ATPasas Transportadoras de Calcio/química , ATPasa Intercambiadora de Hidrógeno-Potásio/química , Membranas Intracelulares/enzimología , Proteínas de la Membrana/química , Estructura Secundaria de Proteína , Adenosina Trifosfato/metabolismo , Animales , ATPasas Transportadoras de Calcio/metabolismo , ATPasa Intercambiadora de Hidrógeno-Potásio/metabolismo , Hidrólisis , Proteínas de la Membrana/metabolismo , Péptido Hidrolasas/metabolismo , Estructura Terciaria de Proteína , Conejos , Retículo Sarcoplasmático/química , Retículo Sarcoplasmático/enzimología , Espectroscopía Infrarroja por Transformada de Fourier , Porcinos
17.
Biochimie ; 80(5-6): 363-9, 1998.
Artículo en Inglés | MEDLINE | ID: mdl-9782377

RESUMEN

FhuA (M(r) = 78,900) is an Escherichia coli outer membrane protein which transports the ferric siderophore ferrichrome and is the receptor for phage T5, phi 80 and T1 and for colicin M. FhuA was purified chromatographically in non-ionic detergent (octyl glucoside). The circular dichroism spectrum indicates that FhuA is essentially organized in beta-strands like the majority of proteins of the outer membrane of Gram-negative bacteria. The structural parameters of FhuA were assessed from size exclusion chromatography, sedimention equilibrium and velocity experiments. FhuA is monomeric in solution and functional since binding of phage T5 causes the release of the phage genome, a double-stranded DNA of 121,000 base pairs, into the surrounding medium. Planar lipid bilayer experiments showed that the FhuA transporter is converted into a high conductance channel upon binding of phage T5. FhuA was reconstituted into large unilamellar vesicles (mean diameter 125 nm). Cryo-electron microscopy and fluorescence experiments, using a DNA intercalant YO-PRO 1, showed that binding of T5 to FhuA triggers the transfer of the phage genome into the proteoliposomes without altering their morphology. Two models can account for these observations, which apply both to in vitro and in vivo DNA transport. The simplest model supposes that the naked DNA is transported through the FhuA channel. Alternatively transfer of DNA might be mediated by pb2, the protein forming the phage straight fiber. pb2 would insert either directly in the membrane or inside the FhuA channel.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa/metabolismo , Bacteriófagos/genética , ADN Viral/metabolismo , Proteínas de Escherichia coli , Escherichia coli/metabolismo , Receptores Virales/metabolismo , Proteínas de la Membrana Bacteriana Externa/química , Transporte Biológico , Escherichia coli/virología , Canales Iónicos/metabolismo , Liposomas/metabolismo , Modelos Biológicos , Receptores Virales/química
18.
Biochimie ; 80(5-6): 531-41, 1998.
Artículo en Inglés | MEDLINE | ID: mdl-9782391

RESUMEN

We have tested the membrane-protein solubilizing properties of two perfluoroalkylphosphocholines. These compounds belong to a series of fluorinated amphiphiles which are being investigated as potential stabilizing agents for a variety of fluorocarbon-based systems. We are particularly interested in cytochrome b558 from phagocytes, the redox component of NADPH oxidase. Its heavy subunit is believed to carry binding sites for NADPH and FAD. Nevertheless, when the cytochrome is purified in the presence of classical detergents, it carries no FAD. This could be due to a delipidating, denaturing effect of these detergents (octyl glucoside, Triton, etc). The first perfluoroalkyphosphocholine, C8F17(CH2)2O-P(O2-)-O(CH2)2N+(CH3)3(F8C2PC), extracted about as much protein from neutrophil plasma membranes into a 100,000 g supernatant as octyl glucoside. The second compound, C8F17(CH2)11O-P(O2-)-O(CH2)2N+(CH3)3(F8C11PC), was less efficient. We found that flavin was still protein-bound in the crude F8C2PC extract at a FAD to heme ratio of about 1, and a good NADPH oxidase activity was obtained without addition of exogenous FAD, even after dialysis or gel filtration, whereas dialysis eliminated most of the FAD from the octyl glucoside extracts. These experiments appeared to make F8C2PC an interesting membrane-solubilizing agent. Nevertheless, no protein in the F8C2PC extract could be adsorbed on the chromatographic supports normally used for purification. After dilution of the extract and addition of 15 mM octyl glucoside, some of the proteins, such as myeloperoxidase, could be adsorbed (and eluted), but not cytochrome b558. Freeze-fracture electron microscopy showed that the F8C2PC extracts contained numerous vesicles and aggregates of small shapeless particles. Higher centrifugal forces sedimented most proteins of the 100,000 g supernatant. As a check, the effect of F8C2PC was tested on sarcoplasmic reticulum vesicles, the behavior of which with respect to the usual non-denaturating detergents has been well studied. There was little, if any, solubilization. We conclude that, although supernatants of F8C2PC extracts of neutrophil membranes are optically clear, proteins are not really solubilized. This result is in keeping with the absence of lytic effects of F8C2PC on erythrocyte membranes.


Asunto(s)
Membrana Celular/química , Proteínas de la Membrana/química , NADPH Oxidasas , Neutrófilos/química , Fosforilcolina/análogos & derivados , Fosforilcolina/química , Tensoactivos/química , Microscopía por Crioelectrón/métodos , Grupo Citocromo b/química , Detergentes/química , Flavinas/análisis , Flavinas/química , Humanos , Proteínas de la Membrana/aislamiento & purificación , Micelas , NADP/metabolismo , Retículo Sarcoplasmático/química , Solubilidad
19.
Anal Biochem ; 264(1): 34-40, 1998 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-9784185

RESUMEN

We describe the construction and use of a dodecyl sulfate-sensitive electrode cell to measure the activity of the detergent in biological samples. The electrode is based on the incorporation of a cetyltrimethylammonium/dodecyl sulfate complex in a siloxane polymer membrane. The cell records changes in the activity of SDS from 10(-6) to 10(-5) M SDS up to the critical micellar concentration. In aqueous solutions the cell follows Nernst' law with an electrometric response which is not affected by protein per se, but is modified by supporting electrolytes like NaCl. We demonstrate by comparison with equilibrium dialysis that the electrode can be used both to detect the high-affinity binding sites of serum albumin for SDS and to follow cooperative binding of the detergent to serum albumin, ovalbumin, and beta-lactoglobulin in the concentration interval 10(-4)-10(-3) M of unbound SDS. We conclude that the electrode has properties which should enable its use to monitor changes in SDS activity during interaction with biological material. The electrode may also be used to measure the activity of other detergents which, like SDS, form a sparingly soluble complex with cetyltrimethylammonium bromide.


Asunto(s)
Electrodos , Dodecil Sulfato de Sodio/análisis , Calibración , Detergentes , Humanos , Lactoglobulinas/química , Lactoglobulinas/metabolismo , Ovalbúmina/química , Ovalbúmina/metabolismo , Unión Proteica , Albúmina Sérica/química , Albúmina Sérica/metabolismo , Dodecil Sulfato de Sodio/metabolismo , Solubilidad , Agua
20.
J Biol Chem ; 273(32): 20134-43, 1998 Aug 07.
Artículo en Inglés | MEDLINE | ID: mdl-9685357

RESUMEN

During active cation transport, sarcoplasmic reticulum Ca2+-ATPase, like other P-type ATPases, undergoes major conformational changes, some of which are dependent on Ca2+ binding to high affinity transport sites. We here report that, in addition to previously described residues of the transmembrane region (Clarke, D. M., Loo, T. W., Inesi, G., and MacLennan, D. H. (1989) Nature 339, 476-478), the region located in the cytosolic L6-7 loop connecting transmembrane segments M6 and M7 has a definite influence on the sensitivity of the Ca2+-ATPase to Ca2+, i.e. on the affinity of the ATPase for Ca2+. Cluster mutation of aspartic residues in this loop results in a strong reduction of the affinity for Ca2+, as shown by the Ca2+ dependence of ATPase phosphorylation from either ATP or Pi. The reduction in Ca2+ affinity for phosphorylation from Pi is observed both at acidic and neutral pH, suggesting that these mutations interfere with binding of the first Ca2+, as proposed for some of the intramembranous residues essential for Ca2+ binding (Andersen, J. P. (1995) Biosci. Rep. 15, 243-261). Treatment of the mutated Ca2+-ATPase with proteinase K, in the absence or presence of various Ca2+ concentrations, leads to Ca2+-dependent changes in the proteolytic degradation pattern similar to those in the wild type but observed only at higher Ca2+ concentrations. This implies that these effects are not due to changes in the conformational state of Ca2+-free ATPase but that changes affecting the proteolytic digestion pattern require higher Ca2+ concentrations. We conclude that aspartic residues in the L6-7 loop might interact with Ca2+ during the initial steps of Ca2+ binding.


Asunto(s)
ATPasas Transportadoras de Calcio/química , Calcio/farmacología , Retículo Sarcoplasmático/enzimología , Transporte Biológico , Endopeptidasa K/metabolismo , Activación Enzimática/fisiología , Proteínas de la Membrana/química , Músculo Esquelético/fisiología , Mutagénesis Sitio-Dirigida/genética , Fosfoproteínas/química , Fosforilación , Unión Proteica/fisiología , Conformación Proteica
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