Long-term preservation of established fibroblast lines from six-banded armadillos (Euphractus sexcintus, Linnaeus, 1758) by extended passage and cryopreservation.

Establishing new somatic cell cultures has raised significant attention as an effective and convenient way to preserve genetic samples for different applications. Although many lines have been established in model animals, none derived from six-banded armadillo species is currently available. We report the successful isolation and characterization of fibroblasts from six-banded armadillos, evaluating the cell quality after extended culture and cryopreservation. Initially, we collected ear skin from five captive adult individuals and identified fibroblast lines by morphology, karyotyping, and immunophenotyping assays. The isolated fibroblasts were evaluated after several passages (fourth, seventh, and tenth passages) and cryopreservation by slow freezing. Cell morphology, viability, metabolism, proliferative activity, mitochondrial membrane potential, and apoptosis levels were analyzed. The skin explants had great adhesion, and cell outgrowth could be seen after 3-6 d. The cells were verified as fibroblasts at the fourth passage by vimentin expression and normal karyotype (2n = 58). The viability remained high (> 87%) and constant from the fourth to the tenth passage (p > 0.05). The passages did not change the cell morphology and metabolic and growth rates. Moreover, cryopreservation did not affect most evaluated parameters; post-thawed cells maintained their viability, growth, metabolism, and apoptosis levels. Nevertheless, cryopreservation increased mitochondrial membrane permeability and cell population doubling time compared to non-cryopreserved cells (p < 0.05). In summary, viable fibroblasts can be obtained from six-banded armadillo skin while conserving their quality as the number of passages increases and featuring few changes after cryopreservation.

The Development of Thematic Core Collections in Cassava Based on Yield, Disease Resistance, and Root Quality Traits.

Thematic collections (TCs), which are composed of genotypes with superior agronomic traits and reduced size, offer valuable opportunities for parental selection in plant breeding programs. Three TCs were created to focus on crucial attributes: root yield (CC_Yield), pest and disease resistance (CC_Disease), and root quality traits (CC_Root_quality). The genotypes were ranked using the best linear unbiased predictors (BLUP) method, and a truncated selection was implemented for each collection based on specific traits. The TCs exhibited minimal overlap, with each collection comprising 72 genotypes (CC_Disease), 63 genotypes (CC_Root_quality), and 64 genotypes (CC_Yield), representing 4%, 3.5%, and 3.5% of the total individuals in the entire collection, respectively. The Shannon-Weaver Diversity Index values generally varied but remained below 10% when compared to the entire collection. Most TCs exhibited observed heterozygosity, genetic diversity, and the inbreeding coefficient that closely resembled those of the entire collection, effectively retaining 90.76%, 88.10%, and 88.99% of the alleles present in the entire collection (CC_Disease, CC_Root_quality, and CC_Disease, respectively). A PCA of molecular and agro-morphological data revealed well-distributed and dispersed genotypes, while a discriminant analysis of principal components (DAPC) displayed a high discrimination capacity among the accessions within each collection. The strategies employed in this study hold significant potential for advancing crop improvement efforts.

Huitlacoche (Ustilago maydis), an Iconic Mexican Fungal Resource: Biocultural Importance, Nutritional Content, Bioactive Compounds, and Potential Biotechnological Applications.

Worldwide, the fungus known as huitlacoche (Ustilago maydis (DC.) Corda) is a phytopathogen of maize plants that causes important economic losses in different countries. Conversely, it is an iconic edible fungus of Mexican culture and cuisine, and it has high commercial value in the domestic market, though recently there has been a growing interest in the international market. Huitlacoche is an excellent source of nutritional compounds such as protein, dietary fiber, fatty acids, minerals, and vitamins. It is also an important source of bioactive compounds with health-enhancing properties. Furthermore, scientific evidence shows that extracts or compounds isolated from huitlacoche have antioxidant, antimicrobial, anti-inflammatory, antimutagenic, antiplatelet, and dopaminergic properties. Additionally, the technological uses of huitlacoche include stabilizing and capping agents for inorganic nanoparticle synthesis, removing heavy metals from aqueous media, having biocontrol properties for wine production, and containing biosurfactant compounds and enzymes with potential industrial applications. Furthermore, huitlacoche has been used as a functional ingredient to develop foods with potential health-promoting benefits. The present review focuses on the biocultural importance, nutritional content, and phytochemical profile of huitlacoche and its related biological properties as a strategy to contribute to global food security through food diversification; moreover, the biotechnological uses of huitlacoche are also discussed with the aim of contributing to the use, propagation, and conservation of this valuable but overlooked fungal resource.

Genetic polymorphism detection in brazilian perennial cottons (Gossypium spp.) using an ISSR marker system and its application for molecular interspecific differentiation.

BACKGROUND: The semi-domesticated Brazilian perennial cotton (Gossypium spp.) germplasm is considered a source of variability for creating modern upland cotton varieties. Here we used Inter-simple Sequence Repeat (ISSR) markers to detect intra and interspecific genetic polymorphism in Gossypium hirsutum L. r. marie-galante and Gossypium barbadense L. and to use molecular data to assessing genetic diversity and molecular discrimination of these species. METHODS AND RESULTS: The sets contained 12 G. barbadense genotypes and 16 G. hirsutum genotypes from a Brazilian collection. The 11 ISSR primers were used for genotyping yielded 101 bands (polymorphism = 47.5%) and were classified as moderately informative (PIC = 0.304). The ISSR markers exposed a greater diversity in G. hirsutum (P = 24.72%; HE =0.071 and I = 0.111) as compared to G. barbadense (P = 17.98%, HE = 0.043 and I = 0.070). The AMOVA analysis showed that 89.47% of the genetic variation was partitioned within species which is supported by Nei's genetic differentiation (Gst = 0.598) and gene flow (Nm = 0.338), suggesting that strong reproductive barriers between species. The UPGMA Cluster Analysis, Principal Coordinate Analysis and Bayesian Model-Based Structural Analysis divided the 28 genotypes into two main clades consistent with the taxonomical delimitation. CONCLUSION: The ISSR marker system offers a new approach to determining molecular differences between two cotton species (G. hirsutum L. r. marie-galante and G. barbadense L.). This study can expand the molecular marker resources for the identification and improvement of our knowledge about the genetic diversity and relationships between perennial cotton genotypes.

Diversity and genetic structure of natural populations of the palm tree Euterpe precatoria (Arecaceae) / Diversidad y estructura genética de poblaciones naturales de la palmera Euterpe precatoria (Arecaceae)

Abstract Introduction: The natural ecosystems of northern Mato Grosso, Brazil, are in process of fragmentation, mainly due to population growth and the expansion of agriculture. This endangers the palm Euterpe precatoria (locally known as açaí), used for construction, palm hearts, juices and ice cream. Objective: To evaluate the local diversity and genetic structure in native populations of E. precatoria. Methods: We collected leaves from 106 fruiting palms from five populations in Mato Grosso State, for analysis of microsatellite markers with Polymerase Chain Reaction. Results: The five SSR loci revealed a total of 30 alleles, ranging from 5 (EE23 and EE43) to 7 (EE2 and EE15), with an average of 6 alleles per locus. The mean PIC was 0.74 and confirmed low heterozygosity and inbreeding. The UPGMA dendrogram produced two groups and molecular variance revealed greater genetic differentiation within populations. The high levels of homozygous microsatellite loci indicate low genetic diversity. Conclusions: These populations have low gene diversity, high average number of alleles per locus, and rare and exclusive alleles. We recommend the establishment of permanent conservation units with corridors among them.

Resumen Introducción: Los ecosistemas naturales del norte de Mato Grosso, Brasil, están en proceso de fragmentación, principalmente debido al crecimiento de la población y la expansión de la agricultura. Esto pone en peligro la palma Euterpe precatoria (localmente conocida como açaí), utilizada para la construcción, extracción de palmito, preparación de jugos y helados. Objetivo: Evaluar la diversidad local y estructura genética en poblaciones nativas de E. precatoria. Métodos: Recolectamos hojas de 106 palmas fructíferas de cinco poblaciones en el estado de Mato Grosso, para análisis de marcadores microsatélites con el método de Reacción en Cadena de la Polimerasa (PCR). Resultados: Los cinco loci SSR revelaron un total de 30 alelos, que van desde 5 (EE23 y EE43) hasta 7 (EE2 y EE15), con un promedio de 6 alelos por locus. El PIC medio fue de 0.74 y confirmó baja heterocigosidad y endogamia en las poblaciones. El dendrograma UPGMA produjo dos grupos y la varianza molecular reveló una mayor diferenciación genética dentro de las poblaciones. Los loci de microsatélites presentaron un alto nivel de homocigotos lo que indica una baja diversidad genética. Conclusiones: Estas poblaciones tienen baja diversidad genética, alto promedio de alelos por locus y alelos raros y únicos. Recomendamos el establecimiento de unidades de conservación permanentes con corredores entre ellas.

Zoometric and ethnological characterization of the colombian creole donkey in Sucre, Colombia

In Colombia, works performed with the colombian creole donkey (CCD) have shown a possible danger of extinction. The above, associate with an alarming decrease in its inventory and a reduction in genetic diversity. Thus, morphological characterization could be the first step for future conservation plans to conduct a repopulation. Therefore, this work aimed to characterize the zoometric and ethnological traits of CCD in five natural subregions of the department of Sucre. 20 males from each of the natural subregions from Sucre (Golfo de Morrosquillo: GM, Montes de María: MM, Mojana: MO, San Jorge: SJ, Sabanas: SA) with an age average of 4.7 ± 1.0 years old and weight estimated between 126.0 ± 19.4 kg were recorded and were submitted to 28 morphometric measurements. Descriptive statistics, analysis of variance between subregions, and hierarchical grouping for statistical analysis were performed. Also, five ethnological indices and five productive indices were estimated. The results showed that most of the zoometric variables varied significantly between subregions. The values assessed were similar to other creole donkey breeds. The hierarchical grouping analysis allowed the creation of two groups with geographic proximity. The structural homogeneity and morphostructural harmony found within the subregions were medium-low. However, when analyzing all the CCD measurements together, medium to high morphostructural uniformity and harmony were evidenced. The ethnological indices allow us to classify the CCD as a longlinear, hypermetric, dolichocephalic, and concavilinear animal. In addition, the productive indices indicated that the CCD is a proportionate donkey, with good poise and aptitude for work.

Es posible que el asno criollo colombiano (ACC) se encuentre en peligro de extinción. La alarmante disminución de su inventario está reduciendo la diversidad genética. Así, la caracterización morfológica es un primer paso en futuros planes de conservación, con el objetivo de repoblación; por tanto, el objetivo de esta investigación fue caracterizar zoométricamente y etnológicamente el ACC, de las cinco subregiones naturales del departamento de Sucre. En 20 machos de cada una de las subregiones naturales del departamento de Sucre (Golfo de Morrosquillo: GM, Montes de María: MM, Mojana: MO, San Jorge: SJ, Sabanas: SA), con edad promedio de 4,7 ± 1,0 años y peso promedio estimado de 126,0 ± 19,4kg, se registraron 28 medidas morfométricas. En el análisis de datos, se consideró la estadística descriptiva, el análisis de varianza entre subregiones, análisis de agrupación jerárquica. También, se estimaron cinco índices etnológicos y cinco índices productivos. La mayoría de las variables zoométricas variaron significativamente entre subregiones, con valores similares a otras razas criollas. El análisis de agrupación jerárquica formó dos grupos con cercanía geográfica. La homogeneidad estructural y la armonía morfoestructural encontrada al interior de las subregiones fue media-baja; sin embargo, al analizar todo el ACC, la homogeneidad y la armonía morfoestructural fue media-alta. Los índices etnológicos clasifican al ACC como longilíneo, hipermétrico, dolicocéfalo y concavilíneo, mientras que los índices productivos indican de un asno proporcionado, de buenos aplomos y de aptitud al trabajo.

Folk nomenclature and traditional knowledge of breadfruit [Artocarpus altilis (Parkinson) Fosberg] diversity in four Anglophone Caribbean countries.

BACKGROUND: Since its introduction to the Anglophone Caribbean in 1793, breadfruit has had a diverse history in the region, and there is a considerable repository of traditional knowledge about the crop, that is undocumented. Consequently, it remains underutilized as a food source, despite recognition of its potential to contribute to food and nutrition security. Understanding the folk taxonomy and traditional knowledge associated with its diversity and uses is a prerequisite to develop programs for its commercial production and utilization. METHOD: This study was conducted among 170 respondents who were selected across four Anglophone Caribbean countries and provided information on the ethnobotany and traditional knowledge associated with breadfruit biodiversity, including systems of naming, identification and classification of breadfruit cultivars or types. RESULTS: Breadfruit has socio-cultural and economic value and is produced for both home use and sale by most respondents (68%). The genetic diversity of breadfruit managed by the respondents is also important, as a total of 51 vernacular names were identified, with nine of those names recorded for the first time in this study. Breadfruit types were identified by morphological and agronomical characteristics, with other important traits relating to use and cooking quality. Classification of breadfruit cultivars or types was based on eating-quality, most suitable methods of preparation and ease of cooking. CONCLUSION: The ethnobotanical and traditional knowledge obtained from this study may be useful in assessing the genetic diversity of breadfruit and guiding future community-based conservation and classification studies of this important crop resource in the Caribbean. This is crucial to support the commercialization of breadfruit to improve its contribution to food and nutrition security.

Pre-domestication bottlenecks of the cultivated seaweed Gracilaria chilensis.

Gracilaria chilensis is the main cultivated seaweed in Chile. The low genetic diversity observed in the Chilean populations has been associated with the over-exploitation of natural beds and/or the founder effect that occurred during post-glacial colonization from New Zealand. How these processes have affected its evolutionary trajectory before farming and incipient domestication is poorly understood. In this study, we used 2232 single nucleotide polymorphisms (SNPs) to assess how the species' evolutionary history in New Zealand (its region of origin), the founder effect linked to transoceanic dispersion and colonization of South America, and the recent over-exploitation of natural populations have influenced the genetic architecture of G. chilensis in Chile. The contrasting patterns of genetic diversity and structure observed between the two main islands in New Zealand attest to the important effects of Quaternary glacial cycles on G. chilensis. Approximate Bayesian Computation (ABC) analyses indicated that Chatham Island and South America were colonized independently near the end of the Last Glacial Maximum and emphasized the importance of coastal and oceanic currents during that period. Furthermore, ABC analyses inferred the existence of a recent and strong genetic bottleneck in Chile, matching the period of over-exploitation of the natural beds during the 1970s, followed by rapid demographic expansion linked to active clonal propagation used in farming. Recurrent genetic bottlenecks strongly eroded the genetic diversity of G. chilensis prior to its cultivation, raising important challenges for the management of genetic resources in this incipiently domesticated species.

Genetic-quantitative uni- and bi-trait analysis for growth traits in the Colombian creole breed Blanco Orejinegro (BON).

The Blanco Orejinegro (BON) is a Colombian creole cattle breed that is not genetically well characterized for growth traits. The aim of this work was to estimate genetic parameters for birth weight (BW), weaning weight (WW), yearling weight (YW), daily weight gain between birth and weaning (DWG), time to reach 120 kg of live weight (T120), and time to reach 60% of adult weight (T60%), and establish the selection criteria for growth traits in the BON population of Colombia. Genealogical and phenotypic information for BW, WW, YW, DWG, T120, and T60% traits of BON animals from 14 Colombian herds were used. These traits were analyzed with the AIREML method in a uni- and bi-trait animal model including the maternal effect for BW, WW, DWG, and T120. The direct heritability estimates values were 0.22 ± 0.059 (BW), 0.20 ± 0.057 (WW), 0.20 ± 0.153 (YW), 0.17 ± 0.07 (DWG), 0.26 (T120), and 0.44 ± 0.03 (T60%). The maternal heritability estimates values were 0.14 ± 0.040 (BW), 0.15 ± 0.039 (WW), 0.25 ± 0.06 (DWG), and 0.16 (T120). The direct genetic correlations were high ( >|0.60|) among all the traits, except between T60% with BW, WW, YW, and DWG (ranged from - 0.02 to - 0.51), all in a favorable direction. The results showed that there is genetic variation in the growth traits associated with the additive genetic effect, and they might respond to selection processes. Furthermore, genetic gains would improve through selection, especially for YW and T60% when WW is used as criterion.

Study of racial profile of the native Guajolote (Meleagris gallopavo gallopavo) in two regions of Mexico: morphometric characterization.

The present study aimed at the morphometric characterization of the native Guajolote reared in two regions of Mexico using multivariate analysis techniques. Data from a total of 362 unrelated native Guajolotes (257 males and 105 females) were used: of these, 160 were from the Central region and 202 were from the Southeast region. The birds were also grouped according to age, as youngs (≤ 8 months; n = 150) and adults (≥ 9 months; n = 212). The body weight (BW) and nine morphometric measurements-chest circumference (CC), body length (BL), body height (BH), neck length (NL), peak length (PL), shank length (SL), shank diameter (SD), wing length (WL) and wing width (WW)-were measured. There were significant differences (p < 0.05) due to the effect of region, sex and age for most of the morphometric measurements evaluated. There was a high percentage of positive and significant correlations (p < 0.001; p < 0.01) between the variables. In each region, three principal components were extracted that represented more than 75% of the accumulated variation among the variables. The most discriminating morphometric measurements between populations were WW, PL and NL. The Mahalanobis distance between the males and females of the two populations was 37.457 and 29.310 (p < 0.001), respectively. This differentiation can contribute to the definition of the phenotypic standard of this poultry genetic resource for its official recognition as a breed, as well as in the orientation of its genetic improvement programs in the future.

Morphological characterization of remaining specimens of the Curraleiro horse in Central Brazil / Caracterização morfológica de espécimes remanescentes do cavalo Curraleiro no Brasil Central

This study aimed to carry out the morphological characterization of the remaining specimens of the Curraleiro horse in municipalities of the state of Goiás, Brazil. Forty male horses were evaluated using the age of five years as a criterion. Sixteen linear measurements and 13 zootechnical indices were obtained. Subsequently, the mean, standard deviation, minimum, maximum, and covariances of these measures and indices were obtained using the software IBM SPSS Statistics for Windows. The measures withers height (WH), croup height (CH), midback height (MH), sternum-to-ground height (SH), chest index (CI), and estimated weight (W) allowed characterizing Curraleiro horses as small-sized, light, and fast, with proportional measures. The dactyl-thoracic index (DTI), body index (BI), conformation index (CFI), load index 1 and 2 (LOI1 and LOI2), and compactness index 1 and 2 (COI1 and COI2) showed that the Curraleiro horse has an intermediate capacity for speed and strength, bearing considerable weight on the back, with saddling aptitude and fast work. These results represent the beginning of the formation of a database that may contribute to future studies and the conservation of the Curraleiro horse in the state of Goiás.(AU)

O objetivo deste trabalho foi a realização da caracterização morfológica de espécimes remanescentes do cavalo Curraleiro em municípios do estado de Goiás, Brasil. Foram avaliados 40 cavalos machos, tendo como critério a idade a partir de cinco anos, dos quais se obteve 16 medidas lineares e 13 índices zootécnicos. Posteriormente, a média, o desvio padrão, o mínimo, o máximo e as covariâncias dessas medidas e índices foram obtidos por meio da utilização do software IBM SPSS Statistics for Windows. As medidas altura da cernelha (AC), altura da garupa (AG), altura do costado (ACost), vazio subesternal (VAZ), índice peitoral (IP) e peso estimado (P) permitiram caracterizar os cavalos Curraleiros como um grupo de pequeno porte, leve, veloz e com medidas proporcionais. Os índices dáctilo-torácico (IDT), corporal (IC), de conformação (ICF), de carga 1 e 2 (ICG1 e ICG2) e de compacidade 1 e 2 (ICO1 e ICO2) demonstraram que o cavalo Curraleiro tem capacidade intermediária para velocidade e força, suportam considerável peso sobre o dorso, e possuem aptidão para sela e tração ligeira. Tais resultados representam o início da formação de uma base de dados que pode contribuir para estudos futuros e a conservação do cavalo Curraleiro no estado de Goiás.(AU)

Evaluación fenotípica de semillas de haba (Vicia faba L.) colectadas en Nariño-Colombia / Phenotypic evaluation of broad bean (Vicia faba L.) seeds collected in Nariño-Colombia

RESUMEN El haba es una leguminosa asociada a sistemas campesinos de clima frío. En Colombia, se cultiva, principalmente, en el departamento de Nariño, donde se ha visto reducida el área y el número de materiales sembrados, debido a la disminución en los niveles de rendimiento del cultivo y la agresividad de los problemas fitosanitarios. Este estudio evaluó la diversidad de esta leguminosa, a partir de la forma y color de la semilla, en una colección de 60 accesiones de haba, discriminadas en siete variedades. Mediante el procesamiento de imágenes digitales y medición manual, se determinó la longitud polar (LP), longitud ecuatorial (LE), relación LP/LE, área (AR), grosor (GR) y peso de cien semillas (P100); además, se calcularon los parámetros de color, basados en la escala CIELab (L*, a* y b*). Las variables, se analizaron con estadística descriptiva, correlación de Pearson y el método multivariado de componentes principales (ACP). Los resultados identificaron alta diversidad de fenotipos, caracterizando, cuantitativamente, las siete variedades. Se presentó correlación alta entre las variables LP, LE y AR, igualmente, entre L* y b*. Con el biplot de los resultados de ACP, se ratificó la variabilidad de la colección y posibilitó generar una agrupación preliminar. La investigación, se puede tomar en cuenta como base para el desarrollo de trabajos de conservación y de evaluación agronómica de esta leguminosa.

ABSTRACT Fava bean is a legume associated with cold climate farming systems. In Colombia, it is grown mainly in the department of Nariño, where the area and number of planted materials have been reduced due to the decrease in crop yield levels and the aggressiveness of phytosanitary problems. This study evaluated the diversity of this legume based on seed shape and color in a collection of 60 bean materials divided into seven varieties. Through digital image processing and manual measurement, polar length (LP), equatorial length (LE), LP/LE ratio, area (AR), thickness (GR) and hundred seed weight (P100) were determined, and color parameters based on the CIELab scale (L*, a* and b*) were calculated. The variables were analyzed with descriptive statistics, Pearson's correlation and the multivariate principal component method (PCA). The results identified a high diversity of phenotypes, quantitatively characterizing the seven varieties. There was a high correlation between the variables LP, LE and AR, as well as between L* and b*. The biplot of the PCA results confirmed the variability of the collection and made it possible to generate a preliminary grouping. The research can be taken into account as a basis for the development of conservation and agronomic evaluation of this legume.

Fiocruz Biological Collections: strengthening Brazil's biodiversity knowledge and scientific applications opportunities.

Biological collections are central in understanding and preserving life on Earth. In Brazil, the most representative collections are kept by natural history museums, whose primary focus is in invertebrates, vertebrates and vascular plants. Only a few institutions keep repositories in different kingdoms. The Oswaldo Cruz Foundation (Fiocruz), established in 1900, is a strategic public health institution of the Ministry of Health of Brazil. As such, Fiocruz is responsible for a wide range of activities, from basic research to the development and production of vaccines, drugs, reagents and diagnostic kits. Its biological collections were soon established in the expeditions made by naturalists and physicians seeking integrated knowledge of the fauna, flora and tropical diseases. Since then, they have been part of the institutional policy. In a few decades, those collections were already in the forefront of basic and applied research on tropical parasitic and infectious diseases. Currently, they comprise thirty-three repositories representing part of the Brazilian diversity of bacteria, fungi, protozoa, helminths, arthropods, molluscs and plants of medical and environmental importance. Different methods of long-term preservation are applied for the conservation of this wide range of organisms represented by about 6 million specimens. Herein, we describe this range of collections and discuss their complementary role as repositories of groups not represented in other biological collections in Brazil. These valuable biological materials have been used in public health and medical research, as well as for technological development and innovation in Brazil. Parallel to this specific usage, Fiocruz biological collections have played and continue to play a unique and important role in understanding and conserving part of Brazil's biodiversity that is currently under-represented in other biological and natural history collections in Brazil and South America.

Milk Potential of Pantaneira Cows, a Local Breed, at Organic System.

Pantaneiro cattle (Bos taurus taurus) is a breed locally adapted to the Brazilian Pantanal. Local breeds are essential for the quality production of organic systems based on planned grazing practices, because of their results in resilient and productive ecosystems, enhancing biodiversity. This study aimed to evaluate the performance of Pantaneira primiparous cows, and systems with reduced use of concentrate, simulating organic production conditions. Five animals, with an average body weight of 396.2 ± 43.5 kg, were kept in individual continuous grazing regimes and supplemented with different concentrate levels (1.2%, 0.9%, 0.6%, 0.3%, and 0.0% of body weight). The animals were allocated at random in a 5 × 5 Latin square design repeated twice during the study time. The cows had a low dry matter and nutrient intake with a reduction in concentrate level, with improvement in neutral detergent fiber digestibility and a reduction in total nutrient digestibility. No changes were observed in plasma glucose levels or urea excretion, but the plasma urea nitrogen decreased with reductions in concentrate levels. There was a reduction in milk yield, but the energy-corrected milk was not affected by the reduction in concentrate levels; furthermore, the milk yield efficiency was not affected. The milk fat content improved with the reduction in concentrate levels. The Pantaneira breed has the genetic potential for the maintenance of competitive production and quality in organic systems.

Diversity of Naturalized Hairy Vetch (Vicia villosa Roth) Populations in Central Argentina as a Source of Potential Adaptive Traits for Breeding.

Hairy vetch (Vicia villosa ssp. villosa Roth) is native of Europe and Western Asia and it is the second most cultivated vetch worldwide. Hairy vetch is used as forage species in semiarid environments and as a legume cover crop in sub-humid and humid regions. Being an incompletely domesticated species, hairy vetch can form spontaneous populations in a new environment. These populations might contain novel and adaptive traits valuable for breeding. Niche occupancy based on geographic occurrence and environmental data of naturalized populations in central Argentina showed that these populations were distributed mainly on disturbed areas with coarse soil texture and alkaline-type soils. Low rainfall and warm temperatures during pre- and post-seed dispersal explained the potential distribution under sub-humid and semiarid conditions from Pampa and Espinal ecoregions. Conversely, local adaptation along environmental gradients did not drive the divergence among recently established Argentinian (AR) populations. The highest genetic diversity revealed by microsatellite analysis was observed within accessions (72%) while no clear separation was detected between AR and European (EU) genotypes, although naturalized AR populations showed strong differentiation with the wild EU accessions. Common garden experiments were conducted in 2014-16 in order to evaluate populations' germination, flowering, and biomass traits. European cultivars were characterized by low physical seed dormancy (PY), while naturalized AR accessions showed higher winter biomass production. Detected variation in the quantitative assessment of populations could be useful for selection in breeding for traits that convey favorable functions within specific contexts.

Identification of a historic horse ecotype analyzing speech content in central Brazil / Resgate de um ecótipo equino histórico mediante análise de conteúdo de discurso no Brasil central

This study represents a first attempt to rescue germplasm of a traditional domestic equine cited in early Iberian and South American literature as Curraleiro horse. As an effort to identify and possibly characterize this type of horse we accessed traditional knowledge in strategic rural areas. Most areas were configured by hinterland settlements founded by runaway slave communities from the sixteenth century. Twenty interviews were conducted and analyzed using classical Speech Content Analysis. As a result, five response categories were recognized: 1) Identification and location of Curraleiro horses; 2) Characterization of Curraleiro horses; 3) Historical aspects; 4) Curraleiro horse conservation prospects and 5) Sanitary and productive aspects of Curraleiro horse breeding. We concluded that although scarce, the Curraleiro horse, cited in literature, still exists and showed phenotypical features which allow fine discrimination from any officially recognized breed in Brazil. Our findings may open the door for the recognition of a genuine animal resource which could play a role in rural development for specific regions and traditional communities. Speech Content Analysis was effective for in loco identification and characterization of rare traditional livestock. Thus, we encourage the usage of this tool as an alternative to subsidize identification and genetic conservation programs worldwide.(AU)

Esse estudo representa uma primeira tentativa de resgate de germoplasma em um equino doméstico tradicional citado em literatura precoce Iberiana e Sul Americana como um cavalo Curraleiro. Num esforço de identificar e possivelmente caracterizar esse tipo de cavalo, acessamos conhecimento tradicional em diversas áreas rurais estratégicas. A maioria consistia em assentamentos rurais fundados por comunidades escravas foragidas no século dezesseis. Vinte entrevistas foram conduzidas e analisadas utilizando análise de conteúdo de discurso clássico. Como resultado, cinco categorias de resposta foram reconhecidas: 1) Identificação e localização de cavalos Curraleiros; 2) Caracterização de cavalos curraleiros; 3) Aspectos históricos, 4) Perspectivas de conservação, e 5) Aspectos sanitários e produtivos da criação de cavalos Curraleiros. Concluímos que, apesar de escasso, o cavalo Curraleiro, citado na literatura, ainda existe e apresenta características fenotípicas que permitem discriminação de raças oficialmente reconhecidas no Brasil. Nossos achados podem abrir alas para o reconhecimento de um recurso animal genuíno que pode ter um papel no desenvolvimento rural em regiões específicas e comunidades tradicionais. Análise de conteúdo de discurso foi eficaz para identificação e caracterização in loco de criação tradicional rara. Desta forma, encorajamos o uso dessa ferramenta como alternativa para subsídio de identificação e programas de conservação genética ao redor do mundo.(AU)

Identification of a historic horse ecotype analyzing speech content in central Brazil / Resgate de um ecótipo equino histórico mediante análise de conteúdo de discurso no Brasil central

This study represents a first attempt to rescue germplasm of a traditional domestic equine cited in early Iberian and South American literature as Curraleiro horse. As an effort to identify and possibly characterize this type of horse we accessed traditional knowledge in strategic rural areas. Most areas were configured by hinterland settlements founded by runaway slave communities from the sixteenth century. Twenty interviews were conducted and analyzed using classical Speech Content Analysis. As a result, five response categories were recognized: 1) Identification and location of Curraleiro horses; 2) Characterization of Curraleiro horses; 3) Historical aspects; 4) Curraleiro horse conservation prospects and 5) Sanitary and productive aspects of Curraleiro horse breeding. We concluded that although scarce, the Curraleiro horse, cited in literature, still exists and showed phenotypical features which allow fine discrimination from any officially recognized breed in Brazil. Our findings may open the door for the recognition of a genuine animal resource which could play a role in rural development for specific regions and traditional communities. Speech Content Analysis was effective for in loco identification and characterization of rare traditional livestock. Thus, we encourage the usage of this tool as an alternative to subsidize identification and genetic conservation programs worldwide.(AU)

Esse estudo representa uma primeira tentativa de resgate de germoplasma em um equino doméstico tradicional citado em literatura precoce Iberiana e Sul Americana como um cavalo Curraleiro. Num esforço de identificar e possivelmente caracterizar esse tipo de cavalo, acessamos conhecimento tradicional em diversas áreas rurais estratégicas. A maioria consistia em assentamentos rurais fundados por comunidades escravas foragidas no século dezesseis. Vinte entrevistas foram conduzidas e analisadas utilizando análise de conteúdo de discurso clássico. Como resultado, cinco categorias de resposta foram reconhecidas: 1) Identificação e localização de cavalos Curraleiros; 2) Caracterização de cavalos curraleiros; 3) Aspectos históricos, 4) Perspectivas de conservação, e 5) Aspectos sanitários e produtivos da criação de cavalos Curraleiros. Concluímos que, apesar de escasso, o cavalo Curraleiro, citado na literatura, ainda existe e apresenta características fenotípicas que permitem discriminação de raças oficialmente reconhecidas no Brasil. Nossos achados podem abrir alas para o reconhecimento de um recurso animal genuíno que pode ter um papel no desenvolvimento rural em regiões específicas e comunidades tradicionais. Análise de conteúdo de discurso foi eficaz para identificação e caracterização in loco de criação tradicional rara. Desta forma, encorajamos o uso dessa ferramenta como alternativa para subsídio de identificação e programas de conservação genética ao redor do mundo.(AU)

Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.).

BACKGROUND: Low phosphorus availability is a major factor restricting rice growth. Dongxiang wild rice (Oryza rufipogon Griff.) has many useful genes lacking in cultivated rice, including stress resistance to phosphorus deficiency, cold, salt and drought, which is considered to be a precious germplasm resource for rice breeding. However, the molecular mechanism of regulation of phosphorus deficiency tolerance is not clear. RESULTS: In this study, cDNA libraries were constructed from the leaf and root tissues of phosphorus stressed and untreated Dongxiang wild rice seedlings, and transcriptome sequencing was performed with the goal of elucidating the molecular mechanisms involved in phosphorus stress response. The results indicated that 1184 transcripts were differentially expressed in the leaves (323 up-regulated and 861 down-regulated) and 986 transcripts were differentially expressed in the roots (756 up-regulated and 230 down-regulated). 43 genes were up-regulated both in leaves and roots, 38 genes were up-regulated in roots but down-regulated in leaves, and only 2 genes were down-regulated in roots but up-regulated in leaves. Among these differentially expressed genes, the detection of many transcription factors and functional genes demonstrated that multiple regulatory pathways were involved in phosphorus deficiency tolerance. Meanwhile, the differentially expressed genes were also annotated with gene ontology terms and key pathways via functional classification and Kyoto Encyclopedia of Gene and Genomes pathway mapping, respectively. A set of the most important candidate genes was then identified by combining the differentially expressed genes found in the present study with previously identified phosphorus deficiency tolerance quantitative trait loci. CONCLUSION: The present work provides abundant genomic information for functional dissection of the phosphorus deficiency resistance of Dongxiang wild rice, which will be help to understand the biological regulatory mechanisms of phosphorus deficiency tolerance in Dongxiang wild rice.

Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)

Abstract Background: Low phosphorus availability is a major factor restricting rice growth. Dongxiang wild rice (Oryza rufipogon Griff.) has many useful genes lacking in cultivated rice, including stress resistance to phosphorus deficiency, cold, salt and drought, which is considered to be a precious germplasm resource for rice breeding. However, the molecular mechanism of regulation of phosphorus deficiency tolerance is not clear. Results: In this study, cDNA libraries were constructed from the leaf and root tissues of phosphorus stressed and untreated Dongxiang wild rice seedlings, and transcriptome sequencing was performed with the goal of elucidating the molecular mechanisms involved in phosphorus stress response. The results indicated that 1184 transcripts were differentially expressed in the leaves (323 up-regulated and 861 down-regulated) and 986 transcripts were differentially expressed in the roots (756 up-regulated and 230 down-regulated). 43 genes were up-regulated both in leaves and roots, 38 genes were up-regulated in roots but down-regulated in leaves, and only 2 genes were down-regulated in roots but up-regulated in leaves. Among these differentially expressed genes, the detection of many transcription factors and functional genes demonstrated that multiple regulatory pathways were involved in phosphorus deficiency tolerance. Meanwhile, the differentially expressed genes were also annotated with gene ontology terms and key pathways via functional classification and Kyoto Encyclopedia of Gene and Genomes pathway mapping, respectively. A set of the most important candidate genes was then identified by combining the differentially expressed genes found in the present study with previously identified phosphorus deficiency tolerance quantitative trait loci. Conclusion: The present work provides abundant genomic information for functional dissection of the phosphorus deficiency resistance of Dongxiang wild rice, which will be help to understand the biological regulatory mechanisms of phosphorus deficiency tolerance in Dongxiang wild rice.

Reproductive characteristics of Crioulo Lageano breed bulls (Bos taurus) at puberty

The aim of this research was to evaluate pubertal development characteristics of Crioulo Lageano breed bulls (n = 10) using morphometric measurements and semen analysis, to identify factors that can be used to estimate age at puberty in this locally adapted breed. Monthly measurement of body weight and fortnightly measurement of scrotal circumference, chest girth, testicular length, width, thickness, and volume were recorded for each of the 10 Crioulo Lageano breed bulls, which were between 10 and 20 months old. During this period, semen samples were collected every two weeks using electro ejaculation method and analyzed physically and morphologically. The ages of the appearance of first spermatozoa in the ejaculate (FSE), the first motile spermatozoa in the ejaculate (FSEM), seminal puberty (PUB) and total detachment between glans penis and prepuce (DPP) were ascertained. Crioulo Lageano bulls reached puberty at 14.1 ± 2.0 months old with lower weight and larger testicles than those of other bovine breeds. Similarly, the period from FSEM to PUB was shorter and the period from FSE to FSEM was longer than those reported for other breeds. The most important characteristics studied in order to estimate puberty age in Crioulo Lageano bulls were the measures of testicular length, width, and volume. These parameters can be used as criteria to select young bulls as sires.(AU)