The Assessment of the Real-Time Radiative Properties and Productivity of Limnospira platensis in Tubular Photobioreactors.

The development of tools to predict the photobioreactors' (PBRs) productivity is a significant concern in biotechnology. To this end, it is required to know the light availability inside the cultivation unit and combine this information with a suitable kinetic expression that links the distribution of radiant energy with the cell growth rate. In a previous study, we presented and validated a methodology for assessing the radiative properties necessary to address the light distribution inside a PBR for varying illuminating conditions through the cultivation process of a phototrophic microorganism. Here, we sought to utilise this information to construct a predictive tool to estimate the productivity of an autotrophic bioprocess carried out in a 100 [L] tubular photobioreactor (TPBR). Firstly, the time-dependent optical properties over ten batch cultures of L. platensis were calculated. Secondly, the local volumetric rate of photon absorption was assessed based on a physical model of the interaction of the radiant energy with the suspended biomass, together with a Monte Carlo simulation algorithm. Lastly, a kinetic expression valid for low illumination conditions has been utilised to reproduce all the cultures' experimentally obtained dry weight biomass concentration values. Taken together, time-dependent radiative properties and the kinetic model produced a valuable tool for the study and scaling up of TPBRs.

Growth, leaf gas exchange and mycorrhizal colonization of three medicinal species submitted to different irradiance levels / Crescimento, trocas gasosas foliares e colonização micorrizica de três espécies de plantas medicinais submetidas a diferentes níveis de irradiância

This study o evaluated growth, leaf gas exchange and arbuscular mycorrhizal fungi root colonization in three medicinal plant species under different irradiance intensities. Fridericia chica (Bonpl.) L.G.Lohmann, Mikania laevigata Sch.Bip. ex Baker and Varronia curassavica Jacq. were propagated by cutting and cultivated for 120 days in artificially shaded environments using black shade-type screens, obtaining four irradiance levels: 100%, 70%, 50% and 30%. The experimental design was completely randomized in a 3 x 4 factorial scheme (three plant species and four irradiation levels) with seven replicates. The three medicinal species showed higher liquid assimilation, mass growth and arbuscular mycorrhizal fungi root colonization rates when exposed to environments with 70% light availability. In relation to physiological responses, V. curassavica presented higher photosynthetic rate, stomatal conductance and transpiration when submitted to 70% irradiance, being able to be cultivated in more open environments with higher irradiation levels. Conversely F. chica and M. laevigata presented shade tolerance characteristics. At the initial growth phase, the results obtained can be used as indicators to recommend the ideal cultivation environment for these species in agroforestry systems.

O objetivo deste trabalho foi avaliar o crescimento, as trocas gasosas foliares e a colonização por fungos micorrízicos arbusculares em três espécies de plantas medicinais, sob diferentes intensidades de irradiância. Fridericia chica (Bonpl.) L.G. Ohmmann, Mikania laevigata Sch.Bip. ex Baker e Varronia curassavica Jacq. foram propagadas por estaquia e cultivadas por 120 dias em ambientes artificialmente sombreados, utilizando telas do tipo sombrite, em quatro níveis de irradiância, 100%, 70%, 50% e 30%. O delineamento experimental foi inteiramente casualizado, em esquema fatorial 3 x 4 (três espécies de plantas e quatro níveis de irradiação) com sete repetições. As três espécies medicinais avaliadas apresentaram maiores taxas de assimilação líquida, crescimento em massa e colonização radicular por fungos micorrízicos arbusculares quando expostas a ambientes com 70% de disponibilidade de luz. Em relação às respostas fisiológicas, V. curassavica apresentou maior taxa fotossintética, condutância estomática e transpiração quando submetidas a 70% de irradiância, podendo ser cultivada em ambientes mais abertos e com maiores níveis de radiação. Por outro lado, F. chica e M. laevigata apresentaram características de plantas tolerantes à sombra. Os resultados obtidos na fase inicial de crescimento podem ser utilizados como um indicador para recomendar o ambiente de plantio dessas três espécies medicinais em sistemas agroflorestais.

Effects of experimental lightgaps and topography on enrichment plantings in a central Amazonian secondary forest

Enrichment plantings into secondary forest are an important option in restoring species diversity and ecosystem services. However, little attention has been given to environmental requirements for species performance. This study evaluated the effects of lightgaps and topographic position on the growth and survival of four native tree species (Pouteria caimito, Garcinia macrophylla, Dipteryx odorata and Cynometra bauhiniaefolia) planted into a 26-year old secondary forest originating from abandoned pastures in the central Amazon Basin. Artificial lightgaps and control plots under closed canopy were uniformly distributed on plateaus and bottomlands near water bodies. Seedlings were planted randomly into the plots and monitored for 28 months. Seedling survival rate was high (93%) and did not differ among species. Overall, lightgaps produced a 38% increase in seedling height relative to the controls. Although the four species naturally occur in mature forest, two of the four grew significantly more in lightgaps than in closed canopy secondary forest. Overall, bottomlands facilitated greater seedling growth in height (38%) relative to plateaus, but only one species exhibited a significant increase. This study shows the importance of the environmental variability generated with canopy openings along the topographic gradient, suggesting that both the selection of species and microsite conditions of planting sites have to be considered important criteria in the recovery of degraded areas. (AU)

Taxonomic shifts in arbuscular mycorrhizal fungal communities with shade and soil nitrogen across conventionally managed and organic coffee agroecosystems.

The composition of arbuscular mycorrhizal fungal (AMF) communities should reflect not only responses to host and soil environments, but also differences in functional roles and costs vs. benefits among arbuscular mycorrhizal fungi. The coffee agroecosystem allows exploration of the effects of both light and soil fertility on AMF communities, because of the variation in shade and soil nutrients farmers generate through field management. We used high-throughput ITS2 sequencing to characterize the AMF communities of coffee roots in 25 fields in Costa Rica that ranged from organic management with high shade and no chemical fertilizers to conventionally managed fields with minimal shade and high N fertilization, and examined relationships between AMF communities and soil and shade parameters with partial correlations, NMDS, PERMANOVA, and partial least squares analysis. Gigasporaceae and Acaulosporaceae dominated coffee AMF communities in terms of relative abundance and richness, respectively. Gigasporaceae richness was greatest in conventionally managed fields, while Glomeraceae richness was greatest in organic fields. While total AMF richness and root colonization did not differ between organic and conventionally managed fields, AMF community composition did; these differences were correlated with soil nitrate and shade. OTUs differing in relative abundance between conventionally managed and organic fields segregated into four groups: Gigasporaceae associated with high light and nitrate availability, Acaulosporaceae with high light and low nitrate availability, Acaulosporaceae and a single relative of Rhizophagus fasciculatus with shade and low nitrate availability, and Claroideoglomus/Glomus with conventionally managed fields but uncorrelated with shade and soil variables. The association of closely related taxa with similar shade and light availabilities is consistent with phylogenetic trait conservatism in AM fungi.

Effects of experimental lightgaps and topography on enrichment plantings in a central Amazonian secondary forest / Efeitos de clareiras experimentais e da topografia sobre plantios de enriquecimento em uma floresta secundária na Amazônia central

Enrichment plantings into secondary forest are an important option in restoring species diversity and ecosystem services. However, little attention has been given to environmental requirements for species performance. This study evaluated the effects of lightgaps and topographic position on the growth and survival of four native tree species (Pouteria caimito, Garcinia macrophylla, Dipteryx odorata and Cynometra bauhiniaefolia) planted into a 26-year old secondary forest originating from abandoned pastures in the central Amazon Basin. Artificial lightgaps and control plots under closed canopy were uniformly distributed on plateaus and bottomlands near water bodies. Seedlings were planted randomly into the plots and monitored for 28 months. Seedling survival rate was high (93%) and did not differ among species. Overall, lightgaps produced a 38% increase in seedling height relative to the controls. Although the four species naturally occur in mature forest, two of the four grew significantly more in lightgaps than in closed canopy secondary forest. Overall, bottomlands facilitated greater seedling growth in height (38%) relative to plateaus, but only one species exhibited a significant increase. This study shows the importance of the environmental variability generated with canopy openings along the topographic gradient, suggesting that both the selection of species and microsite conditions of planting sites have to be considered important criteria in the recovery of degraded areas.(AU)

O plantio de enriquecimento em florestas secundárias é uma opção para restaurar a diversidade de espécies e os serviços ecossistêmicos. No entanto, pouca atenção tem sido dada aos requerimentos ambientais para o melhor desempenho das espécies. Este estudo avaliou os efeitos de clareiras e posição topográfica sobre o crescimento e sobrevivência de quatro espécies arbóreas nativas (Pouteria caimito, Garcinia macrophylla, Dipteryx odorata and Cynometra bauhiniaefolia) plantadas em florestas secundárias oriundas de pastagens abandonadas há 26 anos na Amazônia central. Clareiras artificiais e parcelas de controle sob dossel fechado foram distribuídos uniformemente em platôs e baixios. Mudas foram plantadas aleatoriamente nas parcelas e monitoradas por 28 meses. A taxa de sobrevivência das plântulas foi alta (93%) e não houve diferenças entre as espécies. Entre todas as espécies, houve um incremento de 38% na altura das plântulas em comparação com os controles. Embora as quatro espécies ocorram naturalmente em florestas maduras, duas das quatro cresceram significativamente mais em clareiras do que sob dossel fechado. Entre todas as espécies, plântulas tiveram um maior crescimento em altura (38%) nos baixios que nos platôs, mas apenas uma espécie apresentou um aumento significativo. Este estudo mostra a importância da variabilidade ambiental gerada com aberturas do dossel ao longo do gradiente topográfico, sugerindo que, tanto a seleção de espécies como as condições microambientais deveriam ser considerados como critérios importantes na recuperação de áreas degradadas.(AU)

Transcriptomic analysis suggests a key role for SQUAMOSA PROMOTER BINDING PROTEIN LIKE, NAC and YUCCA genes in the heteroblastic development of the temperate rainforest tree Gevuina avellana (Proteaceae).

Heteroblasty, the temporal development of the meristem, can produce diverse leaf shapes within a plant. Gevuina avellana, a tree from the South American temperate rainforest shows strong heteroblasty affecting leaf shape, transitioning from juvenile simple leaves to highly pinnate adult leaves. Light availability within the forest canopy also modulates its leaf size and complexity. Here we studied how the interaction between the light environment and the heteroblastic progression of leaves is coordinated in this species. We used RNA-seq on the Illumina platform to compare the range of transcriptional responses in leaf primordia of G. avellana at different heteroblastic stages and growing under different light environments. We found a steady up-regulation of SQUAMOSA PROMOTER BINDING PROTEIN LIKE (SPL), NAC, YUCCA and AGAMOUS-LIKE genes associated with increases in age, leaf complexity, and light availability. In contrast, expression of TCP, TPR and KNOTTED1 homeobox genes showed a sustained down-regulation. Additionally, genes involved in auxin synthesis/transport and jasmonate activity were differentially expressed, indicating an active regulation of processes controlled by these hormones. Our large-scale transcriptional analysis of the leaf primordia of G. avellana sheds light on the integration of internal and external cues during heteroblastic development in this species.

Large size and high light do not lower the cost of reproduction for the Neotropical herb Goeppertia marantifolia.

UNLABELLED: • PREMISE OF THE STUDY: Sexual reproduction is often associated with a cost in terms of reduced survival, growth, or future reproduction. It has been proposed that plant size and the environment (availability of key resources) can sometimes lower or even nullify the cost of reproduction.• METHODS: We address this issue experimentally with the Neotropical herb Goeppertia marantifolia, by manipulating sexual reproductive effort and measuring the demographic performance of plants and of their clonal offspring, in the context of natural variation in light availability.• KEY RESULTS: Plants in the high-reproductive-effort treatment grew less between seasons but did not differ in their probability of flowering the second season or in inflorescence size compared with plants in the low-effort treatment. Reproductive effort of parent plants influenced the leaf area of their clonal offspring. Plants that invested less in sexual reproduction produced clonal offspring that were initially larger than those produced by plants that invested more in reproduction. The magnitude of this effect was greater in parent plants that received two seasons of the manipulated reproductive effort than in those that received a single season. The trade-off between reproductive modes dampened with time, leading to smaller differences in clonal offspring leaf area between treatments over time.• CONCLUSIONS: We found evidence of a cost of reproduction and trade-offs between reproductive modes, although the magnitude of these costs was small. However, we found no evidence of lower costs of reproduction for larger plants or for plants in higher-light environments over our 2-yr study period.

Crescimento e produção de pigmentos fotossintéticos em Achillea millefolium L. cultivada sob diferentes níveis de sombreamento e doses de nitrogênio / Growth and production of photosynthetic pigments in Achillea millefolium L. grown under different levels of shading and nitrogen

A espécie Achillea millefolium L., conhecida como mil-folhas, é uma planta herbácea, rizomatosa e perene. Sua importância medicinal deve-se às suas atividades antibacterianas, antiinflamatórias, antitumorais, analgésicas e antioxidantes. O efeito da disponibilidade de luz e do nitrogênio sobre o crescimento e produção dessa espécie é pouco conhecido. O objetivo deste trabalho foi avaliar a resposta de A. millefolium L., cultivada sob diferentes níveis de sombreamento e doses de nitrogênio, quanto ao crescimento e à produção de pigmentos fotossintéticos. As plantas foram cultivadas sob três doses de nitrogênio (0, 75 e 150kg uréia ha-1) e submetidas a dois níveis de sombreamento 0 por cento (luz plena) e 75 por cento (sombrite 75 por cento). Adotou-se o delineamento experimental de blocos casualizados com quatro repetições em um fatorial 3x2 (doses de nitrogênio x níveis de sombreamento). O sombreamento influenciou a maioria dos caracteres avaliados, causando uma redução significativa no acúmulo de massa seca da parte aérea (caule + folha + flor), caule, folhas e flores e aumento nos teores de clorofila a, b, total e carotenóides. Os resultados sugerem que a espécie A. millefolium L. possui adaptação à baixa intensidade luminosa, devido às alterações nas características foliares, relacionadas aos teores de pigmentos fotossintéticos.

Achillea millefolium L., known as yarrow, is an herbaceous, rhizomatous and perennial plant. Its medicinal importance is attributed to antibacterial, anti-inflammatory, antitumoral, analgesical and antioxidant activities. The effect of light availability and nitrogen on growth and production of this species is little known. The objective of this study was to evaluate the growth and production of photosynthetic pigments in A. millefolium L. grown under different levels of shading and nitrogen levels. Plants were cultivated under three nitrogen levels (0, 75 and 150kg urea ha-1) and subjected to two levels of shading 0 percent (full light) and 75 percent (75 percent black). The experimental design was delineated in randomized blocks with four replicates in a factorial 3 x 2 (nitrogen levels x levels of shading). The shading influenced most parameters evaluated, causing a significant reduction in dry mass accumulation of shoot (stem + leave + flower), stem, leaves and flowers and increase in levels of chlorophyll a, b, total and carotenoids. Results suggest that Achillea millefolium L. has adaptated to low light intensity, due to changes in leaf traits related to photosynthetic pigments content.

Crescimento e produção de pigmentos fotossintéticos em Achillea millefolium L. cultivada sob diferentes níveis de sombreamento e doses de nitrogênio

Achillea millefolium L., known as yarrow, is an herbaceous, rhizomatous and perennial plant. Its medicinal importance is attributed to antibacterial, anti-inflammatory, antitumoral, analgesical and antioxidant activities. The effect of light availability and nitrogen on growth and production of this species is little known. The objective of this study was to evaluate the growth and production of photosynthetic pigments in A. millefolium L. grown under different levels of shading and nitrogen levels. Plants were cultivated under three nitrogen levels (0, 75 and 150kg urea ha-1) and subjected to two levels of shading 0% (full light) and 75% (75% black). The experimental design was delineated in randomized blocks with four replicates in a factorial 3 x 2 (nitrogen levels x levels of shading). The shading influenced most parameters evaluated, causing a significant reduction in dry mass accumulation of shoot (stem + leave + flower), stem, leaves and flowers and increase in levels of chlorophyll a, b, total and carotenoids. Results suggest that Achillea millefolium L. has adaptated to low light intensity, due to changes in leaf traits related to photosynthetic pigments content.

A espécie Achillea millefolium L., conhecida como mil-folhas, é uma planta herbácea, rizomatosa e perene. Sua importância medicinal deve-se às suas atividades antibacterianas, antiinflamatórias, antitumorais, analgésicas e antioxidantes. O efeito da disponibilidade de luz e do nitrogênio sobre o crescimento e produção dessa espécie é pouco conhecido. O objetivo deste trabalho foi avaliar a resposta de A. millefolium L., cultivada sob diferentes níveis de sombreamento e doses de nitrogênio, quanto ao crescimento e à produção de pigmentos fotossintéticos. As plantas foram cultivadas sob três doses de nitrogênio (0, 75 e 150kg uréia ha-1) e submetidas a dois níveis de sombreamento 0% (luz plena) e 75% (sombrite 75%). Adotou-se o delineamento experimental de blocos casualizados com quatro repetições em um fatorial 3x2 (doses de nitrogênio x níveis de sombreamento). O sombreamento influenciou a maioria dos caracteres avaliados, causando uma redução significativa no acúmulo de massa seca da parte aérea (caule + folha + flor), caule, folhas e flores e aumento nos teores de clorofila a, b, total e carotenóides. Os resultados sugerem que a espécie A. millefolium L. possui adaptação à baixa intensidade luminosa, devido às alterações nas características foliares, relacionadas aos teores de pigmentos fotossintéticos.

Crescimento e produção de pigmentos fotossintéticos em Achillea millefolium L. cultivada sob diferentes níveis de sombreamento e doses de nitrogênio

Achillea millefolium L., known as yarrow, is an herbaceous, rhizomatous and perennial plant. Its medicinal importance is attributed to antibacterial, anti-inflammatory, antitumoral, analgesical and antioxidant activities. The effect of light availability and nitrogen on growth and production of this species is little known. The objective of this study was to evaluate the growth and production of photosynthetic pigments in A. millefolium L. grown under different levels of shading and nitrogen levels. Plants were cultivated under three nitrogen levels (0, 75 and 150kg urea ha-1) and subjected to two levels of shading 0% (full light) and 75% (75% black). The experimental design was delineated in randomized blocks with four replicates in a factorial 3 x 2 (nitrogen levels x levels of shading). The shading influenced most parameters evaluated, causing a significant reduction in dry mass accumulation of shoot (stem + leave + flower), stem, leaves and flowers and increase in levels of chlorophyll a, b, total and carotenoids. Results suggest that Achillea millefolium L. has adaptated to low light intensity, due to changes in leaf traits related to photosynthetic pigments content.

A espécie Achillea millefolium L., conhecida como mil-folhas, é uma planta herbácea, rizomatosa e perene. Sua importância medicinal deve-se às suas atividades antibacterianas, antiinflamatórias, antitumorais, analgésicas e antioxidantes. O efeito da disponibilidade de luz e do nitrogênio sobre o crescimento e produção dessa espécie é pouco conhecido. O objetivo deste trabalho foi avaliar a resposta de A. millefolium L., cultivada sob diferentes níveis de sombreamento e doses de nitrogênio, quanto ao crescimento e à produção de pigmentos fotossintéticos. As plantas foram cultivadas sob três doses de nitrogênio (0, 75 e 150kg uréia ha-1) e submetidas a dois níveis de sombreamento 0% (luz plena) e 75% (sombrite 75%). Adotou-se o delineamento experimental de blocos casualizados com quatro repetições em um fatorial 3x2 (doses de nitrogênio x níveis de sombreamento). O sombreamento influenciou a maioria dos caracteres avaliados, causando uma redução significativa no acúmulo de massa seca da parte aérea (caule + folha + flor), caule, folhas e flores e aumento nos teores de clorofila a, b, total e carotenóides. Os resultados sugerem que a espécie A. millefolium L. possui adaptação à baixa intensidade luminosa, devido às alterações nas características foliares, relacionadas aos teores de pigmentos fotossintéticos.