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1.
mSphere ; 8(6): e0036923, 2023 Dec 20.
Artículo en Inglés | MEDLINE | ID: mdl-38009947

RESUMEN

IMPORTANCE: C. tetani is a spore-forming, anaerobic bacterium that produces a toxin causing muscle stiffness and paralysis. Tetanus is preventable with the toxoid vaccine, but it remains a significant public health threat in regions with low vaccine coverage. However, there are relatively few isolates and limited genomic information available worldwide. In Japan, about 100 cases are reported each year, but there have been no nationwide surveys of isolates, and no genomic information from Japanese isolates has been published. In our study, we analyzed the genomes of 151 strains from a limited survey of soil in Kumamoto, Japan. Our findings revealed a high degree of genetic diversity, and we also identified a subset of strains that produced significantly more toxin, which provides new insights into the pathogenesis of tetanus. Our findings lay the foundation for future studies to investigate the distribution and evolution of C. tetani in Japan and neighboring countries.


Asunto(s)
Tétanos , Vacunas , Humanos , Toxina Tetánica/genética , Clostridium tetani/genética , Tétanos/microbiología , Japón , Composición de Base , Análisis de Secuencia de ADN , Filogenia , ARN Ribosómico 16S
2.
Toxins (Basel) ; 14(6)2022 05 24.
Artículo en Inglés | MEDLINE | ID: mdl-35737025

RESUMEN

Clostridium botulinum and Clostridium tetani are Gram-positive, spore-forming, and anaerobic bacteria that produce the most potent neurotoxins, botulinum toxin (BoNT) and tetanus toxin (TeNT), responsible for flaccid and spastic paralysis, respectively. The main habitat of these toxigenic bacteria is the environment (soil, sediments, cadavers, decayed plants, intestinal content of healthy carrier animals). C. botulinum can grow and produce BoNT in food, leading to food-borne botulism, and in some circumstances, C. botulinum can colonize the intestinal tract and induce infant botulism or adult intestinal toxemia botulism. More rarely, C. botulinum colonizes wounds, whereas tetanus is always a result of wound contamination by C. tetani. The synthesis of neurotoxins is strictly regulated by complex regulatory networks. The highest levels of neurotoxins are produced at the end of the exponential growth and in the early stationary growth phase. Both microorganisms, except C. botulinum E, share an alternative sigma factor, BotR and TetR, respectively, the genes of which are located upstream of the neurotoxin genes. These factors are essential for neurotoxin gene expression. C. botulinum and C. tetani share also a two-component system (TCS) that negatively regulates neurotoxin synthesis, but each microorganism uses additional distinct sets of TCSs. Neurotoxin synthesis is interlocked with the general metabolism, and CodY, a master regulator of metabolism in Gram-positive bacteria, is involved in both clostridial species. The environmental and nutritional factors controlling neurotoxin synthesis are still poorly understood. The transition from amino acid to peptide metabolism seems to be an important factor. Moreover, a small non-coding RNA in C. tetani, and quorum-sensing systems in C. botulinum and possibly in C. tetani, also control toxin synthesis. However, both species use also distinct regulatory pathways; this reflects the adaptation of C. botulinum and C. tetani to different ecological niches.


Asunto(s)
Toxinas Botulínicas , Botulismo , Clostridium botulinum , Animales , Toxinas Botulínicas/genética , Toxinas Botulínicas/metabolismo , Botulismo/microbiología , Clostridium botulinum/genética , Clostridium botulinum/metabolismo , Clostridium tetani/genética , Clostridium tetani/metabolismo , Humanos , Neurotoxinas/genética , Neurotoxinas/metabolismo
3.
Toxins (Basel) ; 14(1)2022 01 02.
Artículo en Inglés | MEDLINE | ID: mdl-35051008

RESUMEN

BACKGROUND: Ensuring consistency of tetanus neurotoxin (TeNT) production by Clostridium tetani could help to ensure consistent product quality in tetanus vaccine manufacturing, ultimately contributing to reduced animal testing. The aim of this study was to identify RNA signatures related to consistent TeNT production using standard and non-standard culture conditions. METHODS: We applied RNA sequencing (RNA-Seq) to study C. tetani gene expression in small-scale batches under several culture conditions. RESULTS: We identified 1381 time-dependent differentially expressed genes (DEGs) reflecting, among others, changes in growth rate and metabolism. Comparing non-standard versus standard culture conditions identified 82 condition-dependent DEGs, most of which were specific for one condition. The tetanus neurotoxin gene (tetX) was highly expressed but showed expression changes over time and between culture conditions. The tetX gene showed significant down-regulation at higher pH levels (pH 7.8), which was confirmed by the quantification data obtained with the recently validated targeted LC-MS/MS approach. CONCLUSIONS: Non-standard culture conditions lead to different gene expression responses. The tetX gene appears to be the best transcriptional biomarker for monitoring TeNT production as part of batch-to-batch consistency testing during tetanus vaccine manufacturing.


Asunto(s)
Clostridium tetani/genética , Clostridium tetani/metabolismo , Neurotoxinas/biosíntesis , Neurotoxinas/genética , Toxoide Tetánico/biosíntesis , Toxoide Tetánico/normas , Secuencia de Bases , Células Cultivadas , Regulación Bacteriana de la Expresión Génica
4.
Biotechnol Adv ; 54: 107781, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-34029623

RESUMEN

Tetanus vaccination is of major importance for public health in most countries in the world. The World Health Organization indicated that 15,000 tetanus cases were reported in 2018 (Organization, World Health, 2019). Currently, vaccine manufacturers use tetanus toxin produced by Clostridium tetani fermentation in complex media. The complex components, commonly derived from animal sources, introduce potential variability in cultures. To achieve replicable fermentation and to avoid toxic or allergic reactions from animal-source compounds, several studies have tried to switch from complex to chemically defined media without affecting toxin titers. The present review introduces the current knowledge on i) C. tetani strain diversity, whole-genome sequences and metabolic networks; ii) toxin regulation and synthesis; and iii) culture media, cultivation processes and growth requirements. We critically reviewed the reported data on metabolism in C. tetani and completed comparative genomic and proteomic analyses with other Clostridia species. We integrated genomic data based on whole-genome sequence annotation, supplemented with cofactor specificities determined by protein sequence identity, in a new map of C. tetani central metabolism. This is the first data review that integrates insights from omics experiments on C. tetani. The overview of C. tetani physiology described here could provide support for the design of new chemically defined media devoid of complex sources for toxin production.


Asunto(s)
Clostridium tetani , Proteómica , Animales , Reactores Biológicos , Clostridium , Clostridium tetani/genética , Clostridium tetani/metabolismo , Toxina Tetánica/genética , Toxina Tetánica/metabolismo
5.
J Microbiol Biotechnol ; 32(1): 91-98, 2022 Jan 28.
Artículo en Inglés | MEDLINE | ID: mdl-34818665

RESUMEN

Tetanus is a potentially fatal public health illness resulted from the neurotoxins generated by Clostridium tetani. C. tetani is not easily culturable and culturing the relevant bacteria from infected wounds has rarely been useful in diagnosis; PCR-based assays can only be conducted at highly sophisticated laboratories. Therefore, a real-time recombinase polymerase amplification assay (Exo-RPA) was constructed to identify the fragments of the neurotoxin gene of C. tetani. Primers and the exo probe targeting the conserved region were designed, and the resulting amplicons could be detected in less than 20 min, with a detection limit of 20 copies/reaction. The RPA assay displayed good selectivity, and there were no cross-reactions with other infectious bacteria common in penetrating wounds. Tests of target-spiked serum and pus extract revealed that RPA is robust to interfering factors and has great potential for further development for biological sample analysis. This method has been confirmed to be reliable for discriminating between toxic and nontoxic C. tetani strains. The RPA assay dramatically improves the diagnostic efficacy with simplified device architecture and is a promising alternative to real-time PCR for tetanus detection.


Asunto(s)
Técnicas Bacteriológicas/métodos , Clostridium tetani/aislamiento & purificación , Técnicas de Amplificación de Ácido Nucleico/métodos , Recombinasas , Animales , Clostridium tetani/genética , Cartilla de ADN , Humanos , Reacción en Cadena en Tiempo Real de la Polimerasa , Sensibilidad y Especificidad , Tétanos/diagnóstico , Tétanos/microbiología
6.
Sci Rep ; 11(1): 4157, 2021 02 18.
Artículo en Inglés | MEDLINE | ID: mdl-33603121

RESUMEN

Clostridium tetani produces the tetanus toxin (TeNT), one of the most powerful bacterial toxins known to humankind and responsible for tetanus. The regulation of toxin expression is complex and involves the alternative sigma factor TetR as well as other regulators. Here, a transcriptional analysis of the TeNT-encoding large plasmid of C. tetani identified a putative non-coding small RNA (sRNA), located in close vicinity of the 3' untranslated region of the tent gene. A northern blot experiment could identify a respective sRNA with a size of approx. 140 nucleotides. Sequence analysis showed that the sRNA contains a 14-nucleotide region that is complementary to a 5' located region of tent. In order to investigate the function of the sRNA, we applied a RNA interference approach targeting the sRNA in two C. tetani wild-type strains; the constructed antisense C. tetani strains showed an approx. threefold increase in both extracellular and total TeNT production compared to the respective wild-type strains. In addition, recombinant C. tetani strains were constructed that contained tent-locus harboring plasmids with and without the sRNA. However, the introduction of the tent-locus without the sRNA in a C. tetani strain lacking the wild-type TeNT-encoding large plasmid resulted in a lower TeNT production compared to the same strain with recombinant tent-locus with the sRNA. This suggests that the expression or the effect of the sRNA is modulated by the C. tetani genetic background, notably that of the wild-type TeNT-encoding large plasmid. In addition, some recombinant strains exhibited modulated growth patterns, characterized by premature bacterial cell lysis. Taken together, our data indicate that the sRNA acts as a negative regulator of TeNT synthesis, with a possible impact on the growth of C. tetani. We hypothesize that the role of this sRNA is to limit toxin levels in the exponential growth phase in order to prevent premature bacterial lysis.


Asunto(s)
Clostridium tetani/genética , ARN no Traducido/genética , Toxina Tetánica/genética , Proteínas Bacterianas/genética , ADN Bacteriano/genética , Regulación Bacteriana de la Expresión Génica/genética , Plásmidos/genética , Factor sigma/genética , Transactivadores/genética
7.
Med Hypotheses ; 146: 110395, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33341328

RESUMEN

We present the hypothesis to the scientific community actively designing clinical trials and recommending public health guidelines to control the pandemic that - "Tetanus vaccination may be contributing to reduced severity of the COVID-19 infection" - and urge further research to validate or invalidate the effectiveness of the tetanus toxoid vaccine against COVID-19. This hypothesis was revealed by an explainable artificial intelligence system unleashed on open public biomedical datasets. As a foundation for scientific rigor, we describe the data and the artificial intelligence system, document the provenance and methodology used to derive the hypothesis and also gather potentially relevant data/evidence from recent studies. We conclude that while correlations may not be reason for causation, correlations from multiple sources is more than a serendipitous coincidence that is worthy of further and deeper investigation.


Asunto(s)
COVID-19/prevención & control , Modelos Biológicos , Pandemias/prevención & control , SARS-CoV-2 , Toxoide Tetánico/farmacología , Inteligencia Artificial , COVID-19/inmunología , COVID-19/virología , Vacunas contra la COVID-19/farmacología , Clostridium tetani/genética , Clostridium tetani/inmunología , Bases de Datos Farmacéuticas , Reposicionamiento de Medicamentos/estadística & datos numéricos , Humanos , SARS-CoV-2/genética , SARS-CoV-2/inmunología , Homología de Secuencia de Aminoácido , Índice de Severidad de la Enfermedad , Glicoproteína de la Espiga del Coronavirus/genética , Glicoproteína de la Espiga del Coronavirus/inmunología , Toxina Tetánica/genética , Vacunación
8.
J Ind Microbiol Biotechnol ; 47(12): 1059-1073, 2020 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-33175241

RESUMEN

Tetanus is a fatal disease caused by Clostridium tetani infections. To prevent infections, a toxoid vaccine, developed almost a century ago, is routinely used in humans and animals. The vaccine is listed in the World Health Organisation list of Essential Medicines and can be produced and administered very cheaply in the developing world for less than one US Dollar per dose. Recent developments in both analytical tools and frameworks for systems biology provide industry with an opportunity to gain a deeper understanding of the parameters that determine C. tetani virulence and physiological behaviour in bioreactors. Here, we compared a traditional fermentation process with a fermentation medium supplemented with five heavily consumed amino acids. The experiment demonstrated that amino acid catabolism plays a key role in the virulence of C. tetani. The addition of the five amino acids favoured growth, decreased toxin production and changed C. tetani morphology. Using time-course transcriptomics, we created a "fermentation map", which shows that the tetanus toxin transcriptional regulator BotR, P21 and the tetanus toxin gene was downregulated. Moreover, this in-depth analysis revealed potential genes that might be involved in C. tetani virulence regulation. We observed differential expression of genes related to cell separation, surface/cell adhesion, pyrimidine biosynthesis and salvage, flagellar motility, and prophage genes. Overall, the fermentation map shows that, mediated by free amino acid concentrations, virulence in C. tetani is regulated at the transcriptional level and affects a plethora of metabolic functions.


Asunto(s)
Aminoácidos , Clostridium tetani , Aminoácidos/metabolismo , Animales , Clostridium tetani/genética , Clostridium tetani/metabolismo , Clostridium tetani/patogenicidad , Humanos , Toxina Tetánica/biosíntesis , Toxina Tetánica/genética , Transcriptoma
9.
Toxins (Basel) ; 12(5)2020 05 15.
Artículo en Inglés | MEDLINE | ID: mdl-32429286

RESUMEN

Clostridium tetani produces a potent neurotoxin, the tetanus toxin (TeNT), which is responsible for an often-fatal neurological disease (tetanus) characterized by spastic paralysis. Prevention is efficiently acquired by vaccination with the TeNT toxoid, which is obtained by C.tetani fermentation and subsequent purification and chemical inactivation. C.tetani synthesizes TeNT in a regulated manner. Indeed, the TeNT gene (tent) is mainly expressed in the late exponential and early stationary growth phases. The gene tetR (tetanus regulatory gene), located immediately upstream of tent, encodes an alternative sigma factor which was previously identified as a positive regulator of tent. In addition, the genome of C.tetani encodes more than 127 putative regulators, including 30 two-component systems (TCSs). Here, we investigated the impact of 12 regulators on TeNT synthesis which were selected based on their homology with related regulatory elements involved in toxin production in other clostridial species. Among nine TCSs tested, three of them impact TeNT production, including two positive regulators that indirectly stimulate tent and tetR transcription. One negative regulator was identified that interacts with both tent and tetR promoters. Two other TCSs showed a moderate effect: one binds to the tent promoter and weakly increases the extracellular TeNT level, and another one has a weak inverse effect. In addition, CodY (control of dciA (decoyinine induced operon) Y) but not Spo0A (sporulation stage 0) or the DNA repair protein Mfd (mutation frequency decline) positively controls TeNT synthesis by interacting with the tent promoter. Moreover, we found that inorganic phosphate and carbonate are among the environmental factors that control TeNT production. Our data show that TeNT synthesis is under the control of a complex network of regulators that are largely distinct from those involved in the control of toxin production in Clostridium botulinum or Clostridium difficile.


Asunto(s)
Proteínas Bacterianas/genética , Clostridium tetani/genética , Regulación Bacteriana de la Expresión Génica , Toxina Tetánica/genética , Transactivadores/genética , Proteínas Bacterianas/metabolismo , Carbonatos/metabolismo , Clostridium tetani/metabolismo , Redes Reguladoras de Genes , Fosfatos/metabolismo , Regiones Promotoras Genéticas , Toxina Tetánica/biosíntesis , Transactivadores/metabolismo , Transcripción Genética
10.
Biologicals ; 64: 10-14, 2020 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-32057566

RESUMEN

Production of tetanus and other clostridial vaccines highly depends on the stable and reproducible production of high toxin levels. This creates a need to ensure the genetic stability of seed strains. We developed a two-stage method for improved assessment of the genetic stability of Clostridium seed strains. This method is based on next-generation sequencing (NGS) of strain DNA and mapping the sequence reads to a reference sequence. The output allows analysis of global genome consistency followed, if necessary, by detailed expert judgement of potential deviations at the gene level. The limit of detection of our method is an order of magnitude better than that of the currently established pulsed-field gel electrophoresis (PFGE). Improved genetic characterization of bacterial seed lots will have a positive impact on the characterization of the production process. This will be a first step towards applying the consistency approach to vaccine batch release of established vaccines. This can contribute to the reduction and ultimately replacement of routinely used animal tests in vaccine production. This work was carried out as part of the Innovative Medicines Initiative 2 (IMI2) project VAC2VAC (Vaccine batch to vaccine batch comparison by consistency testing).


Asunto(s)
Clostridium tetani/genética , Inestabilidad Genómica , Secuenciación de Nucleótidos de Alto Rendimiento , Toxoide Tetánico/genética
11.
Sci Rep ; 9(1): 11220, 2019 08 02.
Artículo en Inglés | MEDLINE | ID: mdl-31375706

RESUMEN

Clostridium tetani produces a potent neurotoxin, the tetanus neurotoxin (TeNT) that is responsible for the worldwide neurological disease tetanus, but which can be efficiently prevented by vaccination with tetanus toxoid. Until now only one type of TeNT has been characterized and very little information exists about the heterogeneity among C. tetani strains. We report here the genome sequences of 26 C. tetani strains, isolated between 1949 and 2017 and obtained from different locations. Genome analyses revealed that the C. tetani population is distributed in two phylogenetic clades, a major and a minor one, with no evidence for clade separation based on geographical origin or time of isolation. The chromosome of C. tetani is highly conserved; in contrast, the TeNT-encoding plasmid shows substantial heterogeneity. TeNT itself is highly conserved among all strains; the most relevant difference is an insertion of four amino acids in the C-terminal receptor-binding domain in four strains that might impact on receptor-binding properties. Other putative virulence factors, including tetanolysin and collagenase, are encoded in all genomes. This study highlights the population structure of C. tetani and suggests that tetanus-causing strains did not undergo extensive evolutionary diversification, as judged from the high conservation of its main virulence factors.


Asunto(s)
Clostridium tetani/genética , Genoma Bacteriano/genética , Clostridium tetani/patogenicidad , Colagenasas/genética , Secuencia Conservada , Neurotoxinas/genética , Filogenia , Especificidad de la Especie , Toxina Tetánica/genética , Factores de Virulencia/genética
12.
BMC Res Notes ; 12(1): 329, 2019 Jun 10.
Artículo en Inglés | MEDLINE | ID: mdl-31182148

RESUMEN

OBJECTIVES: Bordetella pertussis is the etiological agent of whooping cough, a bacterial infection of especially children, which may be fatal without treatment. In frame of studies to investigate putative effects of vaccination on host-pathogen interaction and clonal distribution of strains, in addition to Corynebacterium diphtheriae and Clostridium tetani toxoid vaccines, also whole-cell and acellular pertussis vaccines were analyzed by mass spectrometry. DATA DESCRIPTION: LC-MS/MS spectra were generated and analyzed using B. pertussis genome data and proteins present in whole-cell and acellular pertussis vaccines were identified. Subcellular localization of proteins and presence of signal peptides was determined bioinformatically.


Asunto(s)
Anticuerpos Antibacterianos/biosíntesis , Bordetella pertussis/genética , Vacuna contra la Tos Ferina/genética , Proteómica/métodos , Tos Ferina/prevención & control , Vacunas Bacterianas/administración & dosificación , Vacunas Bacterianas/genética , Vacunas Bacterianas/inmunología , Bordetella pertussis/inmunología , Niño , Cromatografía Liquida , Clostridium tetani/genética , Clostridium tetani/inmunología , Corynebacterium diphtheriae/genética , Corynebacterium diphtheriae/inmunología , Bases de Datos Factuales , Humanos , Difusión de la Información , Internet , Vacuna contra la Tos Ferina/administración & dosificación , Vacuna contra la Tos Ferina/inmunología , Espectrometría de Masas en Tándem , Vacunas Acelulares , Tos Ferina/inmunología , Tos Ferina/microbiología
13.
Microbiol Spectr ; 7(3)2019 05.
Artículo en Inglés | MEDLINE | ID: mdl-31111816

RESUMEN

The clostridia cause a spectrum of diseases in humans and animals ranging from life-threatening tetanus and botulism, uterine infections, histotoxic infections and enteric diseases, including antibiotic-associated diarrhea, and food poisoning. The symptoms of all these diseases are the result of potent protein toxins produced by these organisms. These toxins are diverse, ranging from a multitude of pore-forming toxins to phospholipases, metalloproteases, ADP-ribosyltransferases and large glycosyltransferases. The location of the toxin genes is the unifying theme of this review because with one or two exceptions they are all located on plasmids or on bacteriophage that replicate using a plasmid-like intermediate. Some of these plasmids are distantly related whilst others share little or no similarity. Many of these toxin plasmids have been shown to be conjugative. The mobile nature of these toxin genes gives a ready explanation of how clostridial toxin genes have been so widely disseminated both within the clostridial genera as well as in the wider bacterial community.


Asunto(s)
Toxinas Bacterianas/genética , Clostridium/genética , Plásmidos , Factores de Virulencia/genética , Toxinas Bacterianas/clasificación , Toxinas Botulínicas/genética , Clostridioides difficile/genética , Clostridium/clasificación , Clostridium/metabolismo , Clostridium botulinum/clasificación , Clostridium botulinum/genética , Clostridium perfringens/genética , Clostridium sordellii/genética , Clostridium tetani/genética , Secuencias Repetitivas Esparcidas , Virulencia/genética
14.
Pathog Dis ; 76(4)2018 06 01.
Artículo en Inglés | MEDLINE | ID: mdl-29684130

RESUMEN

Clostridial neurotoxins, which include botulinum neurotoxins (BoNTs) and tetanus neurotoxins, have evolved a remarkably sophisticated structure and molecular mechanism fine-tuned for the targeting and cleavage of vertebrate neuron substrates leading to muscular paralysis. How and why did this toxin evolve? From which ancestral proteins are BoNTs derived? And what is, or was, the primary ecological role of BoNTs in the environment? In this article, we examine these questions in light of recent studies identifying homologs of BoNTs in the genomes of non-clostridial bacteria, including Weissella, Enterococcus and Chryseobacterium. Genomic and phylogenetic analysis of these more distantly related toxins suggests that they are derived from ancient toxin lineages that predate the evolution of BoNTs and are not limited to the Clostridium genus. We propose that BoNTs have therefore evolved from a precursor family of BoNT-like toxins, and ultimately from non-neurospecific toxins that cleaved different substrates (possibly non-neuronal SNAREs). Comparison of BoNTs with these related toxins reveals several unique molecular features that underlie the evolution of BoNT's unique function, including functional shifts involving all four domains, and gain of the BoNT gene cluster associated proteins. BoNTs then diversified to produce the existing serotypes, including TeNT, and underwent repeated substrate shifts from ancestral VAMP2 specificity to SNAP25 specificity at least three times in their history. Finally, similar to previous proposals, we suggest that one ecological role of BoNTs could be to create a paralytic phase in vertebrate decomposition, which provides a competitive advantage for necrophagous scavengers that in turn facilitate the spread of Clostridium botulinum and its toxin.


Asunto(s)
Clostridium botulinum/genética , Clostridium tetani/genética , Regulación Bacteriana de la Expresión Génica , Genoma Bacteriano , Metaloendopeptidasas/genética , Toxina Tetánica/genética , Chryseobacterium/clasificación , Chryseobacterium/genética , Chryseobacterium/patogenicidad , Clostridium botulinum/clasificación , Clostridium botulinum/patogenicidad , Clostridium tetani/clasificación , Clostridium tetani/patogenicidad , Enterococcus/clasificación , Enterococcus/genética , Enterococcus/patogenicidad , Evolución Molecular , Sitios Genéticos , Interacciones Huésped-Patógeno , Humanos , Metaloendopeptidasas/biosíntesis , Familia de Multigenes , Filogenia , Toxina Tetánica/biosíntesis , Weissella/clasificación , Weissella/genética , Weissella/patogenicidad
15.
Appl Environ Microbiol ; 84(3)2018 02 01.
Artículo en Inglés | MEDLINE | ID: mdl-29150502

RESUMEN

Carbamate kinases catalyze the conversion of carbamate to carbamoyl phosphate, which is readily transformed into other compounds. Carbamate forms spontaneously from ammonia and carbon dioxide in aqueous solutions, so the kinases have potential for sequestrative utilization of the latter compounds. Here, we compare seven carbamate kinases from mesophilic, thermophilic, and hyperthermophilic sources. In addition to the known enzymes from Enterococcus faecalis and Pyrococcus furiosus, the previously unreported enzymes from the hyperthermophiles Thermococcus sibiricus and Thermococcus barophilus, the thermophiles Fervidobacterium nodosum and Thermosipho melanesiensis, and the mesophile Clostridium tetani were all expressed recombinantly, each in high yield. Only the clostridial enzyme did not show catalysis. In direct assays of carbamate kinase activity, the three hyperthermophilic enzymes display higher specific activities at elevated temperatures, greater stability, and remarkable substrate turnover at alkaline pH (9.9 to 11.4). Thermococcus barophilus and Thermococcus sibiricus carbamate kinases were found to be the most active when the enzymes were tested at 80°C, and maintained activity over broad temperature and pH ranges. These robust thermococcal enzymes therefore represent ideal candidates for biotechnological applications involving aqueous ammonia solutions, since nonbuffered 0.0001 to 1.0 M solutions have pH values of approximately 9.8 to 11.8. As proof of concept, here we also show that carbamoyl phosphate produced by the Thermococcus barophilus kinase is efficiently converted in situ to carbamoyl aspartate by aspartate transcarbamoylase from the same source organism. Using acetyl phosphate to simultaneously recycle the kinase cofactor ATP, at pH 9.9 carbamoyl aspartate is produced in high yield and directly from solutions of ammonia, carbon dioxide, and aspartate.IMPORTANCE Much of the nitrogen in animal wastes and used in fertilizers is commonly lost as ammonia in water runoff, from which it must be removed to prevent downstream pollution and evolution of nitrogenous greenhouse gases. Since carbamate kinases transform ammonia and carbon dioxide to carbamoyl phosphate via carbamate, and carbamoyl phosphate may be converted into other valuable compounds, the kinases provide a route for useful sequestration of ammonia, as well as of carbon dioxide, another greenhouse gas. At the same time, recycling the ammonia in chemical synthesis reduces the need for its energy-intensive production. However, robust catalysts are required for such biotransformations. Here we show that carbamate kinases from hyperthermophilic archaea display remarkable stability and high catalytic activity across broad ranges of pH and temperature, making them promising candidates for biotechnological applications. We also show that carbamoyl phosphate produced by the kinases may be efficiently used to produce carbamoyl aspartate.


Asunto(s)
Álcalis/metabolismo , Anabolizantes/metabolismo , Fosfotransferasas (aceptor de Grupo Carboxilo)/metabolismo , Temperatura , Amoníaco/metabolismo , Carbamatos/metabolismo , Carbamoil Fosfato/metabolismo , Catálisis , Clostridium tetani/enzimología , Clostridium tetani/genética , Clostridium tetani/metabolismo , Enterococcus faecalis/enzimología , Enterococcus faecalis/genética , Enterococcus faecalis/metabolismo , Estabilidad de Enzimas , Concentración de Iones de Hidrógeno , Cinética , Modelos Moleculares , Conformación Proteica , Pyrococcus furiosus/enzimología , Pyrococcus furiosus/genética , Pyrococcus furiosus/metabolismo , Thermococcus/enzimología , Thermococcus/genética , Thermococcus/metabolismo
16.
PLoS One ; 12(8): e0182909, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28800585

RESUMEN

Clostridium tetani and Clostridium botulinum produce two of the most potent neurotoxins known, tetanus neurotoxin and botulinum neurotoxin, respectively. Extensive biochemical and genetic investigation has been devoted to identifying and characterizing various C. botulinum strains. Less effort has been focused on studying C. tetani likely because recently sequenced strains of C. tetani show much less genetic diversity than C. botulinum strains and because widespread vaccination efforts have reduced the public health threat from tetanus. Our aim was to acquire genomic data on the U.S. vaccine strain of C. tetani to better understand its genetic relationship to previously published genomic data from European vaccine strains. We performed high throughput genomic sequence analysis on two wild-type and two vaccine C. tetani strains. Comparative genomic analysis was performed using these and previously published genomic data for seven other C. tetani strains. Our analysis focused on single nucleotide polymorphisms (SNP) and four distinct constituents of the mobile genome (mobilome): a hypervariable flagellar glycosylation island region, five conserved bacteriophage insertion regions, variations in three CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) systems, and a single plasmid. Intact type IA and IB CRISPR/Cas systems were within 10 of 11 strains. A type IIIA CRISPR/Cas system was present in two strains. Phage infection histories derived from CRISPR-Cas sequences indicate C. tetani encounters phages common among commensal gut bacteria and soil-borne organisms consistent with C. tetani distribution in nature. All vaccine strains form a clade distinct from currently sequenced wild type strains when considering variations in these mobile elements. SNP, flagellar glycosylation island, prophage content and CRISPR/Cas phylogenic histories provide tentative evidence suggesting vaccine and wild type strains share a common ancestor.


Asunto(s)
Proteínas Bacterianas/genética , Sistemas CRISPR-Cas , Clostridium tetani/genética , Genoma Bacteriano , Filogenia , Polimorfismo de Nucleótido Simple , Bacteriófagos/genética , Secuencia de Bases , Mapeo Cromosómico , Clostridium tetani/clasificación , Clostridium tetani/patogenicidad , Islas Genómicas , Glicosilación , Metaloendopeptidasas/biosíntesis , Metaloendopeptidasas/genética , Plásmidos/química , Plásmidos/metabolismo , Análisis de Secuencia de ADN , Toxina Tetánica/biosíntesis , Toxina Tetánica/genética , Toxoide Tetánico/genética
17.
J Bacteriol ; 199(17)2017 09 01.
Artículo en Inglés | MEDLINE | ID: mdl-28630128

RESUMEN

d-Arabinose-5-phosphate (A5P) isomerases (APIs) catalyze the interconversion of d-ribulose-5-phosphate and d-arabinose-5-phosphate. Various Gram-negative bacteria, such as the uropathogenic Escherichia coli strain CFT073, contain multiple API paralogs (KdsD, GutQ, KpsF, and c3406) that have been assigned various cellular functions. The d-arabinose-5-phosphate formed by these enzymes seems to play important roles in the biosynthesis of lipopolysaccharide (LPS) and group 2 K-antigen capsules, as well as in the regulation of the cellular d-glucitol uptake and uropathogenic infectivity/virulence. The genome of a Gram-positive pathogenic bacterium, Clostridium tetani, contains a gene encoding a putative API, C. tetani API (CtAPI), even though C. tetani lacks both LPS and capsid biosynthetic genes. To better understand the physiological role of d-arabinose-5-phosphate in this Gram-positive organism, recombinant CtAPI was purified and characterized. CtAPI displays biochemical characteristics similar to those of APIs from Gram-negative organisms and complements the API deficiency of an E. coli API knockout strain. Thus, CtAPI represents the first d-arabinose-5-phosphate isomerase to be identified and characterized from a Gram-positive bacterium.IMPORTANCE The genome of Clostridium tetani, a pathogenic Gram-positive bacterium and the causative agent of tetanus, contains a gene (the CtAPI gene) that shares high sequence similarity with those of genes encoding d-arabinose-5-phosphate isomerases. APIs play an important role within Gram-negative bacteria in d-arabinose-5-phosphate production for lipopolysaccharide biosynthesis, capsule formation, and regulation of cellular d-glucitol uptake. The significance of our research is in identifying and characterizing CtAPI, the first Gram-positive API. Our findings show that CtAPI is specific to the interconversion of arabinose-5-phosphate and ribulose-5-phosphate while having no activity with the other sugars and sugar phosphates tested. We have speculated a regulatory role for this API in C. tetani, an organism that does not produce lipopolysaccharide.


Asunto(s)
Isomerasas Aldosa-Cetosa/metabolismo , Clostridium tetani/enzimología , Pentosafosfatos/metabolismo , Ribosamonofosfatos/metabolismo , Isomerasas Aldosa-Cetosa/genética , Isomerasas Aldosa-Cetosa/aislamiento & purificación , Clostridium tetani/genética , Citosol/química , Escherichia coli/enzimología , Escherichia coli/genética , Eliminación de Gen , Expresión Génica , Prueba de Complementación Genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo
19.
Avian Dis ; 60(4): 850-855, 2016 12.
Artículo en Inglés | MEDLINE | ID: mdl-27902906

RESUMEN

A 2-yr-old male gyrfalcon ( Falco rusticolus ) was presented for severe and generalized muscle spasticity and pododermatitis. The falcon had been treated for pododermatitis over the previous 4 mo. Muscle rigidity and spasms involved the entire bird but were more severe on the right leg. The bird was also tachypneic and hyperthermic at 45 C. While the plantar pododermatitis lesions had healed, there was still a small abscess on the lateral aspect of the right foot. Clinical signs were consistent with tetanus. Several bacteria were isolated from the abscess including Clostridium tetani . The isolate was confirmed to be toxigenic by PCR. Attempts to detect tetanus toxin in the bird's plasma were unsuccessful. The abscess was debrided. The gyrfalcon received equine tetanus antitoxin, intravenous metronidazole, methocarbamol, midazolam, a constant-rate infusion of Fentanyl, active cooling, and supportive care. Inhalant anesthesia with isoflurane was the only treatment that would lower the body temperature and reduce the clinical signs. The gyrfalcon died a few hours after admission. The characteristic clinical signs and isolation of toxigenic C. tetani from a wound were strong supportive evidence for a diagnosis of tetanus. This case constitutes the first reported natural occurrence of tetanus in an avian species. Further information is needed to determine whether gyrfalcons are more susceptible to tetanus than are other avian species and whether pododermatitis lesions may be risk factors.


Asunto(s)
Enfermedades de las Aves/microbiología , Clostridium tetani/fisiología , Falconiformes/microbiología , Tétanos/veterinaria , Animales , Clostridium tetani/genética , Clostridium tetani/aislamiento & purificación , Masculino , Tétanos/microbiología
20.
J Infect Public Health ; 9(1): 105-9, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-26220795

RESUMEN

Tetanus resulting from ear injury remains an important health problem, particularly in the developing world. We report the successful detection of Clostridium tetani using tetX specific primers targeting the Cl. tetani neurotoxin. The sample was obtained from an ear discharge of a case of otogenic tetanus in a 2-year-old male child. Based on the culture results of the ear discharge, Gram staining and virulence testing by genotyping, a diagnosis of tetanus was confirmed. This is the first report from India on the successful detection of Cl. tetani in a human clinical sample using tetX specific primers targeting the Cl. tetani neurotoxin.


Asunto(s)
Clostridium tetani/aislamiento & purificación , Cartilla de ADN/genética , Oído/lesiones , Toxina Tetánica/aislamiento & purificación , Tétanos/diagnóstico , Técnicas Bacteriológicas , Preescolar , Clostridium tetani/genética , Clostridium tetani/metabolismo , ADN Bacteriano , Regulación Bacteriana de la Expresión Génica , Genotipo , Humanos , India , Masculino , Toxina Tetánica/genética
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