The use of collagen content as determined by spectral domain polarization-sensitive optical coherence tomography to assess colon anastomosis healing in a rat model.

BACKGROUND/PURPOSE: Many studies have been undertaken to prevent anastomosis leakage of the colon, and several methods have been used to assess anastomosis healing, such as measurement of bursting pressure or hydroxyproline (a marker of collagen) content at the anastomosis site. However, these methods are inappropriate for comparing anastomosis healing at two time points in the same animals. In the present study, we measured the collagen level by spectral domain polarization-sensitive optical coherence tomography (SD-PS-OCT) to assess anastomosis healing. METHODS: Sprague-Dawley rats were divided into groups C (saline-administered controls; study group) and M [a 5-fluorouracil (5-FU)-administered experimental group]. Immediately after end-to-end anastomosis of the colon, SD-PS-OCT images of anastomoses were taken (baseline). Animals were administered saline or 5-FU for 7 days. On the 7th postoperative day, SD-PS-OCT images were acquired, a histopathologic exam was performed, and hydroxyproline levels as well as mRNA expressions of collagen-1 and collagen-3 were measured at the anastomosis site. RESULTS: Fibroblast proliferation and inflammatory cell infiltration were greater in group C than in group M. The mRNA expressions of collagen-1 and collagen-3 were substantially higher in group C. Hydroxyproline levels were higher in group M than in group C. Though collagen levels measured by SD-PS-OCT at 7 days were elevated compared with baseline in group C, no such changes were observed for group M. CONCLUSION: Collagen levels at the colon anastomosis site, measured with SD-PS-OCT, were not increased at 7 days postoperatively versus baseline when 5-FU was injected, but were increased in saline-treated controls. The measurement of collagen content by SD-PS-OCT was found to provide a good means of assessing anastomosis healing, because it allows in situ assessment of collagen contents at baseline and during the postoperative period.

Automatic artifact component removal using a neural network in MCG signal.

An algorithm combining a neural network and a principal component analysis (PCA) is proposed to remove a pulse-type artifact which often occurs in the 61 channel MCG system installed at Samsung Medical Center in Seoul, Korea. In the proposed work, the acquired signal is first decomposed into components by the PCA, and the components corresponding to the artifact are identified and removed by the neural network. The neural network is an essential component in the automation procedure. Unlike existing artifact rejection algorithms, the proposed algorithm is on a component-by-component basis, and the restored signal is used for further processing once the artifact components are successfully removed. Seven parameters are extracted from each time-domain component and are used as the input to the neural network. They are maximum, minimum, peak-to-peak value, variance, mean, skewness, and kurtosis. In the experiments with volunteers, 97% of the decisions made by the neural network are identical to those by the human experts. Using the proposed technique, the artifact was successfully removed from the MCG signal.

Development and characterization of a flavoring agent from oyster cooker effluent.

The general composition of concentrated oyster cooker effluent (OCE) was 80% moisture, 6.7% total nitrogen, 2.4% glycogen, and 8.5% ash. Optimum conditions for enzymatic hydrolysis of OCE were 50 degrees C, 2 h of reaction time, 0.1% amylase mixture (alpha-amylase plus glucoamylase), and 0.2% protease NP. Hydrolysis of OCE led to an increase in free amino acids, with taurine comprising approximately 20% of the total. Inosine monophosphate was predominant (456 mg/100 g) among nucleotides and related compounds. Enzyme hydrolysis increased extractable nitrogen by approximately 2-fold. Trimethylamine, trimethylamine oxide, and total creatinine levels were not affected by enzyme treatment. Predominant aroma-active components of enzyme-hydrolyzed OCE included 2-acetyl-1-pyrroline and 3-(methylthio)propanal. Results of this study may help alleviate the wastewater disposal problem currently caused by OCE.

Adaptive template filtering for signal-to-noise ratio enhancement in magnetic resonance imaging.

In this paper, a local shape-adaptive template filtering is proposed for the enhancement of the signal-to-noise ratio (SNR) without the loss of resolution in magnetic resonance (MR) imaging. Unlike conventional filtering, where the template shape and coefficients are fixed, multiple templates are defined in the proposed algorithm. An optimal template is selected and optimal filtering, based on the template, is applied on a pixel-by-pixel basis. Using the proposed process, edge blurring is minimized and SNR enhancement is maximized by selecting the optimally matched template. Compared to existing two-dimensional (2-D) adaptive linear least square error (LLSE) filters or direction-adaptive recursive filters, the proposed adaptive template filter provides higher SNR and sharper edges for both MR and artificial resolution phantom images.

Finite element analysis of gradient coil deformation and vibration in NMR microscopy.

Resolution degradation due to gradient coil deformation and vibration in NMR microscopy is investigated using finite element analysis. From the analysis, deformations due to the Lorentz force can be as large as 1-10 mum depending on the gradient strength and coil frame material. Thus, these deformations can be one of the major resolution limiting factors in NMR microscopy. Coil vibration, which depends on the input current waveform and resolution degradation due to time-variant deformation and time-invariant deformation are investigated by numerical simulations.

Diffusion and perfusion in high resolution NMR imaging and microscopy.

Diffusion and perfusion phenomena under strong gradient fields (approximately 100 G/cm) are examined in high resolution nuclear magnetic resonance (NMR) imaging and microscopy, where diffusion-associated signal attenuation predominates over T1 and T2 relaxation decays. Image contrast based on the diffusion and microcirculation is discussed with experimental results obtained with a 7.0-T microscopy system. Ultimate resolution limit due to diffusion is investigated in high resolution NMR imaging and microscopy.

Analysis of eddy currents in nuclear magnetic resonance imaging.

The eddy currents in nuclear magnetic resonance (NMR) imaging are analyzed from the solutions of Maxwell's equations and their effects are examined over various experimental conditions from whole-body diagnostic imaging to recently developed NMR microscopy. The analysis is focused mainly on the frequency characteristics and intensity variations of the eddy-current-induced field which depends on the overall system size, ratio of the gradient coil size to the magnet bore diameter, and the pulse-sequence-dependent parameters such as input current waveform and repetition time. From the analysis, the frequency response of the eddy-current-induced field is that of a high-pass filter whose cutoff frequency is inversely proportional to the square of the overall system size. The intensity ratio of the generated field to the induced field is not affected by the overall system size, but is sensitively related to the ratio of the gradient coil size to the magnet bore diameter.

Analysis of the eddy-current induced artifacts and the temporal compensation in nuclear magnetic resonance imaging.

Reduction of eddy currents by a temporal compensation of the input current waveform to the gradient coil is studied with an analytic solution. The technique is the inverse filtering of the eddy-current affected field response, which is calculated from the diffusion equation. The limitation of the temporal compensation due to the spatially variant eddy currents is also investigated for whole-body diagnostic imaging systems and small-bore nuclear magnetic resonance (NMR) microscopy systems. Within a limited imaging volume of less than 60% of the gradient coil diameter, most of eddy-current problems can be solved by the technique.

Nuclear magnetic resonance microscopic ocular imaging for the detection of early-stage cataract.

A nuclear magnetic resonance (NMR) microscopic ocular imaging was performed at 7.0 Tesla to investigate its usefulness in the detection of early-stage cataracts. For this study, galactose cataracts were generated in experimental rabbits through diet (35% galactose), and enucleated eyes were imaged at various times after initiation of the diet. In previous studies using a 0.6 Tesla conventional magnetic resonance imager (MRI), the contrast between normal and cataractous tissues in the lens was not well defined, mainly due to the partial volume effect coming from the limitation of resolution and signal-to-noise ratio (SNR). With resolution of 60 X 60 X 80 microns, early localized precataractous tissue changes were clearly observed after 5 days diet. Precataractous tissue changes were seen histologically but no visible evidence of lens change was detected by the conventional slit lamp biomicroscope at this time. Substantially elongated spin-spin relaxation times (T2) in localized cataractous tissues (72.4 +/- 8.8 msec) were consistently observed compared with those in normal lens region (16.1 +/- 3.2 msec); however, the changes of the spin-lattice relaxation time (T1) were not significant. Some ocular NMR microscopic images with corresponding histological photographs are demonstrated to show the potential of NMR microscopy.

A generalized formulation of diffusion effects in micron resolution nuclear magnetic resonance imaging.

A generalized formulation of the diffusion related nuclear magnetic resonance (NMR) signal is derived from a random walk model. Previous analyses performed in the NMR spectroscopy were the formulations of the diffusion related signal amplitude at a specific time, such as the spin echo formation time. They are, in general, not applicable to continuous time domain analyses. In this paper, we have extended the theory to the two-dimensional imaging case and derived an analytical formula useful for the computation of the diffusion affected signal as a function of continuous time for a time variant gradient. This formulation will be useful in NMR imaging, especially in NMR microscopy where the diffusion associated signal attenuation is serious due to the strong gradient fields (100-1000 G/cm), and at the same time data are acquired continuously for the acquisition period. In addition to the loss of the resolution and signal-to-noise ratio due to the random phase fluctuation by diffusion, the variation of the intensity during the data acquisition period introduces a line broadening whose full width at half-maximum is found to be much larger than the bandwidth-limited resolution or diffusion related intrinsic resolution. This line spreading effect is integrated in a computer simulation and is evaluated as an integral part of the overall diffusion effects in micron resolution NMR imaging or NMR microscopy.

Nuclear magnetic resonance microscopy with 4-microns resolution: theoretical study and experimental results.

Nuclear magnetic resonance (NMR) microscopy with 4-microns resolution, a step closer to the 1-micron resolution with which in vivo cellular imaging would be possible is described. An analysis of the ultimate resolution and voxel size dependent signal-to-noise ratio (SNR) in NMR microscopy is presented and experimentally verified. For microscopic scale objects (less than 1-mm diameter), the SNR based on the geometrical scale factor(s) is found to be proportional to sn where n less than 2, rather than n = 3 as previously supposed. This comes about because of a drastic reduction in sample noise coupled with a significant sensitivity gain realized in small diameter radiofrequency coils. A new pulse sequence which reduces both diffusion dependent resolution degradation and signal attenuation is presented. The selection of optimal bandwidth and acquisition time for maximal SNR is discussed. Experimental results obtained on both a 2.0-T whole-body system and a 7.0-T small bore system adapted for microscopy indicate the potentials of 4-microns resolution microscopy with the existing magnets.

The effects of random directional distributed flow in nuclear magnetic resonance imaging.

Capillary flow or microscopic random directional coherent flow as a model of perfusion is investigated both theoretically and experimentally. In the model, we assumed that molecular motion within a finite resolvable volume element (voxel) is a superposition of flow of randomly oriented small capillaries. In such a case, the observed signal from the capillary flow within a voxel will be attenuated in signal amplitude without any change in phase. Although this attenuation effect is similar to the diffusion phenomenon, it differs basically in the following aspects: since the motion in each capillary segment is coherent, phase cancellation occurs at even echoes due to spin rephasing, while the diffusion phenomenon is a purely random Brownian motion of the thermally agitated molecules, changing both in direction and speed during the measurement period. Because of the random character of diffusion, even-echo rephasing cannot be observed. Thus capillary flow or perfusionlike microscopic flow can be measured based on the above distinct flow characteristics, i.e., signal restoration at even echoes versus signal amplitude attenuation at odd echoes. By applying a suitable mathematical algorithm, information on the capillary flow alone can be extracted from the two separate distinct measurements, i.e., one with a single echo and the other with a double echo. Both a theoretical calculation of the capillary flow, as well as the experimental results with a human volunteer by a 0.6-T nuclear magnetic resonance imager, are presented.

A new phase correction method in NMR imaging based on autocorrelation and histogram analysis.

A new statistical approach to phase correction in NMR imaging is proposed. The proposed scheme consists of first-and zero-order phase corrections each by the inverse multiplication of estimated phase error. The first-order error is estimated by the phase of autocorrelation calculated from the complex valued phase distorted image while the zero-order correction factor is extracted from the histogram of phase distribution of the first-order corrected image. Since all the correction procedures are performed on the spatial domain after completion of data acquisition, no prior adjustments or additional measurements are required. The algorithm can be applicable to most of the phase-involved NMR imaging techniques including inversion recovery imaging, quadrature modulated imaging, spectroscopic imaging, and flow imaging, etc. Some experimental results with inversion recovery imaging as well as quadrature spectroscopic imaging are shown to demonstrate the usefulness of the algorithm.

An improved nuclear magnetic resonance diffusion coefficient imaging method using an optimized pulse sequence.

Two-dimensional diffusion coefficient maps (images) of a carefully controlled diffusion phantom have been measured by a new diffusion imaging sequence using a 0.6-T whole-body nuclear magnetic resonance (NMR) scanner having a gradient field strength of 2.5 mT/m. The free induction decay (FID) data for the diffusion coefficient images were collected by varying the duration of the readout gradient in the conventional two-dimensional Fourier imaging sequence. The experimental results obtained by the proposed NMR diffusion measurement technique indicate a close agreement with other previous measurements. The selection of optimum spin-echo time for maximum signal-to-noise ratio (SNR) in diffusion imaging is studied and also experimentally confirmed. Finally, a preclinical study with human volunteers has been performed and results are presented.

High-speed spiral-scan echo planar NMR imaging-I.

An improved echo planar high-speed imaging technique using spiral scan is presented and experimental advantages are discussed. This proposed spiral-scan echo planar imaging (SEPI) technique employs two linearly increasing sinusoidal gradient fields, which results in a spiral trajectory in the spatial frequency domain (k-domain) that covers the entire frequency domain uniformly. The advantages of the method are: 1) circularly symmetric T2 weighting, resulting in a circularly symmetric point spread function in the image domain; 2) elimination of discontinuities in gradient waveforms which in turn will reduce initial transient as well as steady-state distortions; and 3) effective rapid spiral-scan from dc to high frequency in a continuous fashion, which ensures multiple pulsing with interlacing for further resolution improvement without T2 decay image degradation. Some preliminary experimental results will be presented and further possible improvements suggested.