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1.
Data Brief ; 51: 109568, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37822883

RESUMO

In the domain of vision-based applications, the importance of text cannot be underestimated due to its natural capacity to provide accurate and comprehensive information. The application of scene text editing systems enables the modification and enhancement of textual material included in natural images while maintaining the integrity of the overall visual layout. The complexity of keeping the original background context and font styles when altering, however, is an extremely difficult challenge considering the changed image must perfectly blend with the original without being altered. This article contains significant simulated data on the dynamic features of digital image editing, advertising, content development, and related fields. The system comprises key components such as 2D simulated text on the styled image (is), text image (it), masking of text (maskt), real background image (tb), real sample image (tf), text skeleton (tsk), and text styled image (tt). The source dataset contains diverse components such as background images, color variations, fonts, and text content, while the synthetic dataset consists of 49,000 randomly generated images. The dataset provides both researchers and practitioners with a rich resource for identifying and evaluating these dynamic features. The dataset is publicly accessible via the link: https://data.mendeley.com/datasets/h9kry9y46s/3.

2.
Polymers (Basel) ; 15(23)2023 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-38231996

RESUMO

Polymeric drug delivery technology, which allows for medicinal ingredients to enter a cell more easily, has advanced considerably in recent decades. Innovative medication delivery strategies use biodegradable and bio-reducible polymers, and progress in the field has been accelerated by future possible research applications. Natural polymers utilized in polymeric drug delivery systems include arginine, chitosan, dextrin, polysaccharides, poly(glycolic acid), poly(lactic acid), and hyaluronic acid. Additionally, poly(2-hydroxyethyl methacrylate), poly(N-isopropyl acrylamide), poly(ethylenimine), dendritic polymers, biodegradable polymers, and bioabsorbable polymers as well as biomimetic and bio-related polymeric systems and drug-free macromolecular therapies have been employed in polymeric drug delivery. Different synthetic and natural biomaterials are in the clinical phase to mitigate different diseases. Drug delivery methods using natural and synthetic polymers are becoming increasingly common in the pharmaceutical industry, with biocompatible and bio-related copolymers and dendrimers having helped cure cancer as drug delivery systems. This review discusses all the above components and how, by combining synthetic and biological approaches, micro- and nano-drug delivery systems can result in revolutionary polymeric drug and gene delivery devices.

3.
Comput Biol Med ; 125: 104022, 2020 10.
Artigo em Inglês | MEDLINE | ID: mdl-33022522

RESUMO

Post Transactional Modification (PTM) is a vital process which plays an important role in a wide range of biological interactions. One of the most recently identified PTMs is Malonylation. It has been shown that Malonylation has an important impact on different biological pathways including glucose and fatty acid metabolism. Malonylation can be detected experimentally using mass spectrometry. However, this process is both costly and time-consuming which has inspired research to find more efficient and fast computational methods to solve this problem. This paper proposes a novel approach, called SEMal, to identify Malonylation sites in protein sequences. It uses both structural and evolutionary-based features to solve this problem. It also uses Rotation Forest (RoF) as its classification technique to predict Malonylation sites. To the best of our knowledge, our extracted features as well as our employed classifier have never been used for this problem. Compared to the previously proposed methods, SEMal outperforms them in all metrics such as sensitivity (0.94 and 0.89), accuracy (0.94 and 0.91), and Matthews correlation coefficient (0.88 and 0.82), for Homo Sapiens and Mus Musculus species, respectively. SEMal is publicly available as an online predictor at: http://brl.uiu.ac.bd/SEMal/.


Assuntos
Lisina , Processamento de Proteína Pós-Traducional , Sequência de Aminoácidos , Animais , Evolução Biológica , Humanos , Lisina/metabolismo , Camundongos
4.
Genes (Basel) ; 11(9)2020 08 31.
Artigo em Inglês | MEDLINE | ID: mdl-32878321

RESUMO

Post Translational Modification (PTM) is defined as the alteration of protein sequence upon interaction with different macromolecules after the translation process. Glutarylation is considered one of the most important PTMs, which is associated with a wide range of cellular functioning, including metabolism, translation, and specified separate subcellular localizations. During the past few years, a wide range of computational approaches has been proposed to predict Glutarylation sites. However, despite all the efforts that have been made so far, the prediction performance of the Glutarylation sites has remained limited. One of the main challenges to tackle this problem is to extract features with significant discriminatory information. To address this issue, we propose a new machine learning method called BiPepGlut using the concept of a bi-peptide-based evolutionary method for feature extraction. To build this model, we also use the Extra-Trees (ET) classifier for the classification purpose, which, to the best of our knowledge, has never been used for this task. Our results demonstrate BiPepGlut is able to significantly outperform previously proposed models to tackle this problem. BiPepGlut achieves 92.0%, 84.8%, 95.6%, 0.82, and 0.88 in accuracy, sensitivity, specificity, Matthew's Correlation Coefficient, and F1-score, respectively. BiPepGlut is implemented as a publicly available online predictor.


Assuntos
Evolução Molecular , Glutaratos/química , Lisina/química , Mycobacterium tuberculosis/metabolismo , Fragmentos de Peptídeos/química , Processamento de Proteína Pós-Traducional , Proteínas/química , Algoritmos , Sequência de Aminoácidos , Animais , Biologia Computacional , Glutaratos/metabolismo , Lisina/metabolismo , Aprendizado de Máquina , Camundongos , Mycobacterium tuberculosis/crescimento & desenvolvimento , Fragmentos de Peptídeos/metabolismo , Proteínas/metabolismo , Máquina de Vetores de Suporte
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