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Proc Natl Acad Sci U S A ; 99(22): 14153-8, 2002 Oct 29.
Artigo em Inglês | MEDLINE | ID: mdl-12391313

RESUMO

Electron tomograms of intact frozen-hydrated cells are essentially three-dimensional images of the entire proteome of the cell, and they depict the whole network of macromolecular interactions. However, this information is not easily accessible because of the poor signal-to-noise ratio of the tomograms and the crowded nature of the cytoplasm. Here, we describe a template matching algorithm that is capable of detecting and identifying macromolecules in tomographic volumes in a fully automated manner. The algorithm is based on nonlinear cross correlation and incorporates elements of multivariate statistical analysis. Phantom cells, i.e., lipid vesicles filled with macromolecules, provide a realistic experimental scenario for an assessment of the fidelity of this approach. At the current resolution of approximately 4 nm, macromolecules in the size range of 0.5-1 MDa can be identified with good fidelity.


Assuntos
Algoritmos , Proteínas Arqueais/análise , Chaperoninas/análise , Cisteína Endopeptidases/análise , Complexos Multienzimáticos/análise , Vesículas Revestidas , Microscopia Crioeletrônica/métodos , Lipossomos/química , Análise Multivariada , Dinâmica não Linear , Complexo de Endopeptidases do Proteassoma
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