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Hum Mutat ; 39(12): 1957-1972, 2018 12.
Artigo em Inglês | MEDLINE | ID: mdl-30152191

RESUMO

Transcription factor GATA4 is known to play crucial role during heart development, regulating expression of several other key cardiogenic factors. Various GATA4 mutations are reported in familial as well as sporadic cases of congenital heart defects (CHDs). To estimate the prevalence and pathogenic potential of GATA4 variants in our CHD cohort, we have screened 285 CHD cases along with 200 controls by Sanger sequencing and identified 9 genetic variants (c.23C>A; p.Ala8Asp, c.25G>A; p.Ala9Thr, c.223G>T; p.Ala75Ser, c.383A>T; p.Glu128Val, c.397A>T; p.Ser133Cys, c.682T>A; p.Trp228Arg, c.1064C>G; p.Thr355Ser, c.1073G>C; p.Ser358Thr, and c.1220C>A; p.Pro407Gln) in 22 unrelated CHD probands (frequency:7.72%). Five of these are novel and located in the N-terminal transactivation domain (TAD) and first zinc finger domain. Majority C-terminal domain variants are polymorphic. Two of the TAD variants p.Glu128Val, p.Ser133Cys, and a first zinc finger variant p.Trp228Arg, impair combinatorial synergy of NKX2-5, SRF, and TBX5, suggesting potential role of these domains in GATA4 interactions with these factors. Decreased DNA-binding affinity with EMSA also supports this observation. Homology modeling and tertiary structure comparison show conformational changes in these variants. Interestingly, GATA4 variants are more frequently associated with ToF (45%; P = 0.0046) and PS (22.7%; P < 0.0001) in spite of abundance of septal defects in our study cohort.


Assuntos
Fator de Transcrição GATA4/química , Fator de Transcrição GATA4/genética , Polimorfismo de Nucleotídeo Único , Análise de Sequência de DNA/métodos , Tetralogia de Fallot/genética , Animais , Estudos de Casos e Controles , Linhagem Celular , Pré-Escolar , Fator de Transcrição GATA4/metabolismo , Estudos de Associação Genética , Predisposição Genética para Doença , Humanos , Índia , Masculino , Camundongos , Modelos Moleculares , Prevalência , Ligação Proteica , Domínios Proteicos , Estrutura Terciária de Proteína
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